SUPERFAMILY 1.75 HMM library and genome assignments server

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Chlorophyll a-b binding protein family domain assignments


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View all assignments containing a Chlorophyll a-b binding protein domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   9082 9082
No Yes Selaginella moellendorffii   19 19
No Yes Pinus taeda Loblolly pine 12 12
No Yes Picea abies Norway spruce 7 7
No Yes Eucalyptus grandis v201 Rose gum 27 27
No Yes Theobroma cacao B97-61/B2 v1 Cacao 15 15
No Yes Gossypium raimondii v221   36 36
No Yes Citrus clementina v165   23 23
No Yes Citrus sinensis v154 Sweet orange 37 37
No Yes Thellungiella halophila v173   21 21
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 30 30
No Yes Capsella rubella v183   20 20
No Yes Arabidopsis lyrata Lyrate rockcress 18 18
No Yes Arabidopsis thaliana 10 Thale cress 24 24
No Yes Carica papaya Papaya 15 15
No Yes Medicago truncatula Barrel medic 24 24
No Yes Phaseolus vulgaris v186 French bean 26 26
No Yes Glycine max v109 Soybean 44 44
No Yes Cucumis sativus v122 Cucumber 17 17
No Yes Fragaria vesca Wild strawberry 19 19
No Yes Malus domestica v196 Apple 40 40
No Yes Prunus persica v139 Peach 17 17
No Yes Linum usitatissimum v200 Flax 31 31
No Yes Manihot esculenta v147 Cassava 23 23
No Yes Populus trichocarpa v156 Black cottonwood 23 23
No Yes Vitis vinifera Wine grape 17 17
No Yes Mimulus guttatus v140 Spotted monkey flower 36 36
No Yes Solanum lycopersicum v.2.3 Tomato 30 30
No Yes Solanum tuberosum Potato 44 41
No Yes Actinidia chinensis Hongyang   9 9
No Yes Aquilegia coerulea v195   50 49
No Yes Triticum urartu 22   28 27
No Yes Triticum aestivum 22 Bread wheat 90 90
No Yes Aegilops tauschii 22   24 22
No Yes Brachypodium distachyon Stiff brome 20 20
No Yes Oryza barthii 22 African wild rice 15 15
No Yes Oryza meridionalis 22   15 15
No Yes Oryza glumaepatula 22   15 15
No Yes Oryza glaberrima African rice 13 13
No Yes Oryza punctata 22   16 16
No Yes Oryza nivara 22   15 15
No Yes Oryza brachyantha 22 Malo sina 13 13
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 22 22
No Yes Oryza sativa v193 Rice 22 22
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 24 24
No Yes Panicum virgatum v202 Switchgrass 36 36
No Yes Setaria italica v164 Foxtail millet 17 17
No Yes Zea mays subsp. mays Maize 39 39
No Yes Zea mays v181 Maize 39 39
No Yes Sorghum bicolor Sorghum 13 13
No Yes Musa balbisiana Balbis banana 23 23
No Yes Musa acuminata 22 Wild Malaysian banana 21 21
No Yes Amborella trichopoda 22   20 20
No Yes Physcomitrella patens   43 43
No Yes Coccomyxa subellipsoidea sp. C-169 v2   17 17
No Yes Asterochloris sp. Cgr/DA1pho v1.0   11 11
No Yes Chlorella variabilis sp. NC64A   15 15
No Yes Chlorella vulgaris   17 17
No Yes Volvox carteri f. nagariensis   33 33
No Yes Volvox carteri v199   44 44
No Yes Chlamydomonas reinhardtii 4.0   20 20
No Yes Ostreococcus sp. RCC809   8 8
No Yes Ostreococcus lucimarinus CCE9901   11 11
No Yes Ostreococcus tauri   11 11
No Yes Bathycoccus prasinos   8 8
No Yes Micromonas sp. RCC299   8 8
No Yes Micromonas pusilla CCMP1545 v3.0   6 6
No Yes Bigelowiella natans CCMP2755 22   10 10
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 14 14
No Yes Hordeum vulgare 22 Domesticated barley 38 38
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 15 15
No Yes Pinus sylvestris (Incomplete) Scots pine 1 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 15 15
No Yes Lotus japonicus (Early assembly)   12 12
No Yes Malus x domestica (Duplicate) Apple 40 40
No Yes Ricinus communis (Early assembly) Castor bean 14 14
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   78 71
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 29 29
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 30 30
No Yes Phoenix dactylifera (Early draft) Date palm 6 6
No Yes Arabidopsis thaliana 10 Thale cress 19 19
No Yes NCBI 2017_08 genome   2097 2091
No Yes STRING v9.0.5 (STRING)   213 213
No Yes Uniprot 2018_03 genome   3754 3682
No Yes Global Ocean Sampling Expedition (GOS)   3 3
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   68 68
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   118 118
No Yes TargetDB (Targets)   9 9

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