SUPERFAMILY 1.75 HMM library and genome assignments server

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SBT domain superfamily domain assignments
in
STRING v9.0.5

Network of domain occurrence in all genomes


Assignment details

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STRING v9.0.5 (STRING) has 196 significant domains in 193 proteins.

     

Sequence ID   Evalue   Region   Family  
15368.BRADI1G02760.1   1.83e-37   154-234   SBT domain  
15368.BRADI1G26720.1   1.28e-38   83-162   SBT domain  
15368.BRADI1G31390.1   2.62e-38   168-247   SBT domain  
15368.BRADI2G11240.1   2.49e-35   130-209   SBT domain  
15368.BRADI2G25580.1   2.75e-33   163-242   SBT domain  
15368.BRADI2G59110.1   2.75e-38   66-146   SBT domain  
15368.BRADI3G03510.1   6.41e-39   187-267   SBT domain  
15368.BRADI3G05510.1   8.37e-38   59-140   SBT domain  
15368.BRADI3G05720.1   3.27e-37   218-294   SBT domain  
15368.BRADI3G40030.1   1.57e-39   79-158   SBT domain  
15368.BRADI3G40240.1   2.88e-37   186-265   SBT domain  
15368.BRADI3G41250.1   7.19e-38   118-199   SBT domain  
15368.BRADI4G18890.1   2.62e-22   68-117   SBT domain  
15368.BRADI4G18900.1   0.000000000000353   5-39   SBT domain  
15368.BRADI4G33770.1   3.92e-40   76-156   SBT domain  
15368.BRADI4G34670.1   6.47e-32   104-202   SBT domain  
15368.BRADI5G17720.1   1.31e-22   70-122   SBT domain  
  0.0000000000157   136-172   SBT domain  
15368.BRADI5G24670.1   5.62e-37   184-264   SBT domain  
29760.GSVIVG00002776001   1.7e-38   89-170   SBT domain  
29760.GSVIVG00002800001   4.61e-39   179-259   SBT domain  
29760.GSVIVG00002959001   1.7e-37   148-228   SBT domain  
29760.GSVIVG00003071001   9.22e-40   54-133   SBT domain  
29760.GSVIVG00004625001   2.22e-36   80-160   SBT domain  
29760.GSVIVG00008511001   2.35e-36   83-163   SBT domain  
29760.GSVIVG00017032001   4.32e-33   173-255   SBT domain  
29760.GSVIVG00017953001   1.57e-38   91-172   SBT domain  
29760.GSVIVG00018616001   1.18e-38   48-128   SBT domain  
29760.GSVIVG00019157001   9.94e-39   50-131   SBT domain  
29760.GSVIVG00019158001   4.45e-38   151-230   SBT domain  
29760.GSVIVG00019711001   9.16e-38   144-226   SBT domain  
29760.GSVIVG00019851001   1.96e-34   132-212   SBT domain  
29760.GSVIVG00025360001   3.79e-41   67-147   SBT domain  
29760.GSVIVG00027720001   6.54e-38   82-160   SBT domain  
29760.GSVIVG00028195001   3.27e-37   97-178   SBT domain  
29760.GSVIVG00030009001   7.16e-41   179-260   SBT domain  
29760.GSVIVG00037879001   4.19e-38   88-169   SBT domain  
3055.JGI101247   1.15e-31   1-76   SBT domain  
3055.JGI101657   3.14e-29   1-74   SBT domain  
3055.JGI105679   2.09e-25   1-72   SBT domain  
3055.JGI106739   3.79e-23   2-75   SBT domain  
3055.JGI108149   4.71e-21   6-70   SBT domain  
3055.JGI108444   1.96e-24   3-75   SBT domain  
3055.JGI115124   1.96e-29   1-72   SBT domain  
3055.JGI115254   1.77e-18   2-46   SBT domain  
3055.JGI118761   1.06e-21   11-67   SBT domain  
3055.JGI120852   8.11e-21   2-58   SBT domain  
3055.JGI121606   1.83e-26   1-75   SBT domain  
3055.JGI121939   2.22e-23   16-88   SBT domain  
3055.JGI170753   0.0000000000000471   15-71   SBT domain  
3055.JGI171833   7.46e-26   49-122   SBT domain  
3055.JGI186869   3.79e-30   89-167   SBT domain  
3055.JGI195928   4.97e-31   437-514   SBT domain  
3055.JGI288620   1.83e-20   2-69   SBT domain  
3055.JGI290479   0.000000000000379   24-98   SBT domain  
3055.JGI291579   4.19e-26   514-592   SBT domain  
3055.JGI405089   1.83e-22   21-93   SBT domain  
3055.JGI414856   2.88e-24   92-169   SBT domain  
3055.JGI93505   1.09e-17   153-209   SBT domain  
3055.JGI96716   2.09e-27   1-72   SBT domain  
3218.JGI168927   1.31e-37   237-317   SBT domain  
3218.JGI168928   7.06e-39   270-350   SBT domain  
3218.JGI19787   1.31e-31   2-79   SBT domain  
3218.JGI19788   1.31e-31   2-79   SBT domain  
3218.JGI29422   1.7e-36   1-75   SBT domain  
3218.JGI29851   4.45e-26   1-55   SBT domain  
3218.JGI69445   3.53e-32   531-623   SBT domain  
3218.JGI74968   7.32e-39   266-346   SBT domain  
3218.JGI74970   1.83e-38   283-363   SBT domain  
3218.JGI83876   8.76e-39   370-449   SBT domain  
3218.JGI8925   1.57e-37   1-78   SBT domain  
3218.JGI90199   4.05e-38   237-317   SBT domain  
3218.JGI93998   1.83e-38   431-510   SBT domain  
3218.JGI97909   6.67e-38   151-230   SBT domain  
3694.estExt_Genewise1_v1.C_1240186   6.57e-39   58-138   SBT domain  
3694.estExt_Genewise1_v1.C_LG_XV2187   4.32e-39   92-173   SBT domain  
3694.estExt_fgenesh4_pm.C_LG_VIII0830   4.32e-33   131-210   SBT domain  
3694.estExt_fgenesh4_pm.C_LG_X0096   1.18e-33   111-190   SBT domain  
3694.eugene3.00051637   4.05e-37   143-223   SBT domain  
3694.eugene3.00120942   2.62e-39   108-189   SBT domain  
3694.eugene3.00160416   1.57e-40   73-152   SBT domain  
3694.eugene3.00190655   0.0000000000153   5-40   SBT domain  
3694.eugene3.00640244   0.0000000471   72-103   SBT domain  
3694.fgenesh4_pg.C_LG_II001303   4.84e-38   166-247   SBT domain  
3694.fgenesh4_pg.C_LG_X001404   1.57e-38   192-272   SBT domain  
3694.fgenesh4_pm.C_LG_II000008   5.49e-37   105-185   SBT domain  
3694.grail3.0010026901   1.24e-21   163-211   SBT domain  
3694.grail3.0010027301   0.000000000000569   141-175   SBT domain  
3694.grail3.0047015901   5.1e-22   185-233   SBT domain  
3694.gw1.107.39.1   2.16e-40   25-105   SBT domain  
3694.gw1.129.152.1   6.67e-38   4-79   SBT domain  
3694.gw1.164.76.1   7.46e-38   17-92   SBT domain  
3694.gw1.40.76.1   1.96e-38   1-77   SBT domain  
3694.gw1.40.81.1   1.31e-38   24-99   SBT domain  
3694.gw1.8978.5.1   5.36e-41   7-88   SBT domain  
3694.gw1.I.7690.1   1.7e-37   1-77   SBT domain  
3694.gw1.I.7783.1   4.71e-38   1-78   SBT domain  
3694.gw1.II.3778.1   9.16e-38   1-74   SBT domain  
3694.gw1.II.489.1   9.94e-40   149-230   SBT domain  
3694.gw1.III.2396.1   9.81e-37   1-76   SBT domain  
3694.gw1.IV.3037.1   2.35e-39   9-88   SBT domain  
3694.gw1.VII.548.1   1.08e-38   12-92   SBT domain  
3694.gw1.X.791.1   1.06e-37   148-229   SBT domain  
3694.gw1.XI.3794.1   1.86e-40   17-97   SBT domain  
3694.gw1.XIV.2149.1   9.94e-40   149-230   SBT domain  
3702.AT1G02065.1-P   1.47e-37   186-265   SBT domain  
3702.AT1G20980.1-P   3.27e-37   118-196   SBT domain  
3702.AT1G27360.3-P   3.01e-37   173-251   SBT domain  
3702.AT1G27370.2-P   1.7e-37   174-251   SBT domain  
3702.AT1G53160.1-P   4.05e-38   53-131   SBT domain  
3702.AT1G69170.1-P   1.57e-39   122-201   SBT domain  
3702.AT1G76580.1-P   2.22e-37   80-161   SBT domain  
3702.AT2G33810.1-P   1.47e-38   53-130   SBT domain  
3702.AT2G42200.1-P   1.96e-40   72-152   SBT domain  
3702.AT2G47070.1-P   2.35e-39   105-184   SBT domain  
3702.AT3G15270.1-P   3.14e-38   62-141   SBT domain  
3702.AT3G57920.1-P   2.88e-37   57-137   SBT domain  
3702.AT3G60030.1-P   1.22e-39   125-206   SBT domain  
3702.AT5G18830.1-P   6.67e-34   136-216   SBT domain  
3702.AT5G43270.3-P   3.4e-38   167-247   SBT domain  
3702.AT5G50570.2-P   2.88e-39   99-180   SBT domain  
3702.AT5G50670.1-P   2.88e-39   99-180   SBT domain  
39946.BGIOSIBCE001428   1.18e-34   105-184   SBT domain  
39946.BGIOSIBCE004786   2.88e-37   90-172   SBT domain  
39946.BGIOSIBCE005559   3.79e-38   890-971   SBT domain  
39946.BGIOSIBCE005814   2.09e-38   62-144   SBT domain  
39946.BGIOSIBCE005842   4.19e-22   195-248   SBT domain  
  0.0000000000366   265-296   SBT domain  
39946.BGIOSIBCE013570   1.7e-38   113-193   SBT domain  
39946.BGIOSIBCE016133   2.35e-38   106-185   SBT domain  
39946.BGIOSIBCE016900   4.71e-37   183-263   SBT domain  
39946.BGIOSIBCE019010   2.75e-33   166-245   SBT domain  
  0.00000275   271-297   SBT domain  
39946.BGIOSIBCE022899   1.15e-38   179-257   SBT domain  
39946.BGIOSIBCE022900   0.0000000000314   104-135   SBT domain  
39946.BGIOSIBCE022926   1.16e-36   66-148   SBT domain  
39946.BGIOSIBCE023215   1.24e-38   179-259   SBT domain  
39946.BGIOSIBCE024892   5.1e-38   108-188   SBT domain  
39946.BGIOSIBCE028446   0.000000157   122-154   SBT domain  
39946.BGIOSIBCE028486   1.96e-37   185-264   SBT domain  
39946.BGIOSIBCE028638   0.00000000000153   124-157   SBT domain  
39946.BGIOSIBCE030513   0.00000000000667   174-208   SBT domain  
39946.BGIOSIBCE034552   0.00000000000667   20-52   SBT domain  
39947.LOC_Os01g18850.1   1.44e-34   105-184   SBT domain  
39947.LOC_Os01g69830.1   2.88e-37   90-172   SBT domain  
39947.LOC_Os02g04680.1   1.05e-38   180-261   SBT domain  
39947.LOC_Os02g07780.1   1.31e-38   66-148   SBT domain  
39947.LOC_Os02g08070.1   9.03e-38   195-273   SBT domain  
39947.LOC_Os03g61760.1   1.83e-38   150-230   SBT domain  
39947.LOC_Os04g46580.1   3.24e-39   106-185   SBT domain  
39947.LOC_Os04g56170.1   6.8e-37   183-263   SBT domain  
39947.LOC_Os05g33810.1   2.35e-33   169-248   SBT domain  
39947.LOC_Os06g44860.1   1.15e-38   179-257   SBT domain  
39947.LOC_Os06g45310.1   1.16e-36   65-147   SBT domain  
39947.LOC_Os06g49010.4   1.24e-38   179-259   SBT domain  
39947.LOC_Os07g32170.1   5.1e-38   108-188   SBT domain  
39947.LOC_Os08g39890.1   2.49e-40   102-181   SBT domain  
39947.LOC_Os08g40260.1   1.96e-37   185-264   SBT domain  
39947.LOC_Os08g41940.1   2.22e-38   116-197   SBT domain  
39947.LOC_Os09g31438.1   5.89e-36   72-158   SBT domain  
39947.LOC_Os09g32944.1   2.35e-38   113-194   SBT domain  
39947.LOC_Os11g30370.1   4.71e-38   92-171   SBT domain  
436017.A4S8Z1   0.0000471   70-146   SBT domain  
4558.Sb01g002530.1   6.54e-39   150-230   SBT domain  
4558.Sb02g028420.1   1.26e-39   70-150   SBT domain  
4558.Sb02g029300.1   8.89e-39   122-203   SBT domain  
4558.Sb02g034180.1   7.72e-35   135-216   SBT domain  
4558.Sb03g011920.1   2.49e-35   129-210   SBT domain  
4558.Sb03g044160.1   6.28e-39   95-175   SBT domain  
4558.Sb04g003175.1   9.16e-39   179-259   SBT domain  
4558.Sb04g004940.1   3.66e-39   62-143   SBT domain  
4558.Sb04g005180.1   6.41e-37   203-280   SBT domain  
4558.Sb05g017510.1   3.01e-39   77-157   SBT domain  
4558.Sb06g024630.1   1.7e-38   138-217   SBT domain  
4558.Sb06g031290.1   5.36e-37   176-256   SBT domain  
4558.Sb07g026220.1   1.83e-38   107-188   SBT domain  
4558.Sb07g027420.1   3.66e-37   176-255   SBT domain  
4558.Sb07g027740.1   3.66e-39   94-174   SBT domain  
4558.Sb09g020110.1   3.27e-33   184-263   SBT domain  
4558.Sb10g026200.1   2.62e-38   193-272   SBT domain  
4558.Sb10g029190.1   4.84e-38   158-239   SBT domain  
59689.fgenesh1_pg.C_scaffold_2001253   4.84e-40   127-206   SBT domain  
59689.fgenesh2_kg.1__2292__AT1G20980.1   3.27e-37   125-203   SBT domain  
59689.fgenesh2_kg.1__23__AT1G02065.1   1.37e-37   179-258   SBT domain  
59689.fgenesh2_kg.1__2893__AT1G27370.2   1.7e-37   174-251   SBT domain  
59689.fgenesh2_kg.1__4389__AT1G53160.2   1.03e-37   53-131   SBT domain  
59689.fgenesh2_kg.4__1394__AT2G33810.1   1.37e-38   52-129   SBT domain  
59689.fgenesh2_kg.4__2943__AT2G47070.1   1.44e-39   120-200   SBT domain  
59689.fgenesh2_kg.5__2235__AT3G57920.1   2.75e-37   57-137   SBT domain  
59689.scaffold_103051.1   8.5e-37   173-251   SBT domain  
59689.scaffold_202615.1   4.19e-37   126-207   SBT domain  
59689.scaffold_403069.1   1.23e-40   71-151   SBT domain  
59689.scaffold_503227.1   6.93e-40   120-200   SBT domain  
59689.scaffold_601959.1   1.2e-33   139-219   SBT domain  
59689.scaffold_800740.1   8.76e-38   174-253   SBT domain  
59689.scaffold_801495.1   2.35e-39   99-180   SBT domain  
 
Weak hits:
10141.ENSCPOP00000001936   0.0589   349-379   SBT domain  
10228.JGI56675   0.0133   55-91   SBT domain  
10228.JGI61264   0.0144   138-178   SBT domain  
104341.JGI93002   0.00569   4-32   SBT domain  
13616.ENSMODP00000015856   0.0314   118-154   SBT domain  
13616.ENSMODP00000033326   0.0288   8-39   SBT domain  
13616.ENSMODP00000038610   0.0451   10-59   SBT domain  
148305.A4R4E5   0.0145   14-43   SBT domain  
162425.CADANIAP00007445   0.0432   117-146   SBT domain  
164328.JGI96467   0.0179   528-575   SBT domain  
223283.PSPTO_0053   0.000405   8-58   SBT domain  
264201.pc0446   0.0149   208-251   SBT domain  
264732.Moth_0693   0.051   47-84   SBT domain  
266265.Bxe_C0200   0.0353   53-83   SBT domain  
281687.CJA26181   0.0863   105-132   SBT domain  
2850.JGI47872   0.0706   178-208   SBT domain  
29760.GSVIVG00025600001   0.00602   37-84   SBT domain  
298386.PBPRA1969   0.0824   42-84   SBT domain  
29883.JGI331155   0.0249   36-70   SBT domain  
29883.JGI331174   0.0392   44-87   SBT domain  
3055.JGI296580   0.0314   166-220   SBT domain  
314275.MADE_00379   0.00366   99-141   SBT domain  
314275.MADE_01287   0.0128   99-141   SBT domain  
314275.MADE_03600   0.0128   99-141   SBT domain  
374931.CGSHiGG_08820   0.0745   5-21   SBT domain  
395019.Bmul_1578   0.0405   73-105   SBT domain  
395492.Rleg2_0728   0.0863   2-21   SBT domain  
39947.LOC_Os03g24184.1   0.0549   105-153   SBT domain  
45351.JGI213033   0.0101   253-289   SBT domain  
478009.OE6183A1R   0.00432   5-42   SBT domain  
478009.OE7063A1R   0.00432   5-42   SBT domain  
519442.Huta_0232   0.0334   235-265   SBT domain  
575788.VS_1207   0.0243   7-40   SBT domain  
5850.PKH_080540   0.0412   32-61   SBT domain  
5911.XP_001032310   0.0569   208-237   SBT domain  
59374.Fisuc_0242   0.0471   166-191   SBT domain  
59689.scaffold_302862.1   0.0942   61-119   SBT domain  
59729.ENSTGUP00000001584   0.0235   10-49   SBT domain  
59729.ENSTGUP00000004715   0.0212   10-65   SBT domain  
59748.PAa_0476   0.0314   13-35   SBT domain  
6085.XP_002157380   0.0392   224-262   SBT domain  
6085.XP_002163093   0.0222   84-133   SBT domain  
6085.XP_002165510   0.0275   553-574   SBT domain  
6238.CBG22147   0.0589   20-73   SBT domain  
63737.Npun_R3353   0.0144   117-160   SBT domain  
64091.VNG6051H   0.00432   5-42   SBT domain  
64091.VNG6475H   0.00432   5-42   SBT domain  
70448.Q00S16   0.0104   68-117   SBT domain  
70448.Q00SE6   0.00628   69-118   SBT domain  
70448.Q00TM3   0.000196   253-332   SBT domain  
7668.XP_001202853   0.0824   75-135   SBT domain  
7668.XP_795507   0.0745   258-300   SBT domain  
9258.ENSOANP00000013314   0.0824   64-99   SBT domain  
9615.ENSCAFP00000010771   0.00687   69-94   SBT domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   9266 9266
No Yes Selaginella moellendorffii   22 22
No Yes Pinus taeda Loblolly pine 14 13
No Yes Picea abies Norway spruce 9 9
No Yes Eucalyptus grandis v201 Rose gum 25 25
No Yes Theobroma cacao B97-61/B2 v1 Cacao 17 17
No Yes Gossypium raimondii v221   72 72
No Yes Citrus clementina v165   33 33
No Yes Citrus sinensis v154 Sweet orange 58 58
No Yes Thellungiella halophila v173   21 21
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 29 29
No Yes Capsella rubella v183   19 19
No Yes Arabidopsis lyrata Lyrate rockcress 15 15
No Yes Arabidopsis thaliana 10 Thale cress 30 30
No Yes Carica papaya Papaya 11 11
No Yes Medicago truncatula Barrel medic 28 28
No Yes Phaseolus vulgaris v186 French bean 28 28
No Yes Glycine max v109 Soybean 55 55
No Yes Cucumis sativus v122 Cucumber 17 17
No Yes Fragaria vesca Wild strawberry 16 16
No Yes Malus domestica v196 Apple 44 42
No Yes Prunus persica v139 Peach 17 17
No Yes Linum usitatissimum v200 Flax 33 32
No Yes Manihot esculenta v147 Cassava 24 24
No Yes Populus trichocarpa v156 Black cottonwood 35 35
No Yes Vitis vinifera Wine grape 19 19
No Yes Mimulus guttatus v140 Spotted monkey flower 18 18
No Yes Solanum lycopersicum v.2.3 Tomato 17 17
No Yes Solanum tuberosum Potato 32 32
No Yes Actinidia chinensis Hongyang   30 30
No Yes Aquilegia coerulea v195   24 24
No Yes Triticum urartu 22   13 13
No Yes Triticum aestivum 22 Bread wheat 37 37
No Yes Aegilops tauschii 22   18 18
No Yes Brachypodium distachyon Stiff brome 19 18
No Yes Oryza barthii 22 African wild rice 26 26
No Yes Oryza meridionalis 22   24 24
No Yes Oryza glumaepatula 22   26 26
No Yes Oryza glaberrima African rice 17 17
No Yes Oryza punctata 22   28 28
No Yes Oryza nivara 22   34 33
No Yes Oryza brachyantha 22 Malo sina 18 18
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 29 29
No Yes Oryza sativa v193 Rice 29 29
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 33 32
No Yes Panicum virgatum v202 Switchgrass 36 36
No Yes Setaria italica v164 Foxtail millet 21 21
No Yes Zea mays subsp. mays Maize 52 51
No Yes Zea mays v181 Maize 58 56
No Yes Sorghum bicolor Sorghum 18 18
No Yes Musa balbisiana Balbis banana 60 58
No Yes Musa acuminata 22 Wild Malaysian banana 58 58
No Yes Amborella trichopoda 22   12 12
No Yes Physcomitrella patens   14 14
No Yes Coccomyxa subellipsoidea sp. C-169 v2   4 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   4 4
No Yes Chlorella variabilis sp. NC64A   40 38
No Yes Chlorella vulgaris   3 3
No Yes Volvox carteri f. nagariensis   24 24
No Yes Volvox carteri v199   12 12
No Yes Chlamydomonas reinhardtii 4.0   23 23
No Yes Ostreococcus lucimarinus CCE9901   1 1
No Yes Bathycoccus prasinos   4 4
No Yes Micromonas sp. RCC299   6 6
No Yes Micromonas pusilla CCMP1545 v3.0   3 3
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 17 17
No Yes Hordeum vulgare 22 Domesticated barley 28 28
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 21 19
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   16 16
No Yes Malus x domestica (Duplicate) Apple 44 42
No Yes Ricinus communis (Early assembly) Castor bean 15 15
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   39 38
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 17 17
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 17 17
No Yes Phoenix dactylifera (Early draft) Date palm 5 5
No Yes Arabidopsis thaliana 10 Thale cress 17 17
No Yes NCBI 2017_08 genome   3238 3234
No Yes STRING v9.0.5 (STRING)   196 193
No Yes Uniprot 2018_03 genome   3188 3165
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   3 3
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   9 9
No Yes TargetDB (Targets)   3 3

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