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  Home > Genomes > CCHHC domain domains in all eukaryotic genomes


CCHHC domain superfamily domain assignments
in
all eukaryotic genomes

Assignment details

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25 selected genomes have 659 significant domains in 177 proteins.

Showing genomes 1 to 25 of 204
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Homo sapiens 76_38 has 83 significant domains in 26 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSP00000259021   0.0000000000000183   182-224   CCHHC domain  
ENSP00000276480   3.92e-16   722-765   CCHHC domain  
  0.00000000000000445   765-804   CCHHC domain  
  0.00000000000017   365-409   CCHHC domain  
  0.000000000000183   813-849   CCHHC domain  
  0.00000000000131   867-903   CCHHC domain  
  0.00000000000157   410-445   CCHHC domain  
ENSP00000327465   0.00000000000000183   798-836   CCHHC domain  
  0.00000000000000562   841-879   CCHHC domain  
  0.0000000000000301   439-483   CCHHC domain  
  0.0000000000000785   890-926   CCHHC domain  
  0.000000000000209   27-63   CCHHC domain  
  0.000000000000288   943-979   CCHHC domain  
  0.0000000000017   484-521   CCHHC domain  
ENSP00000353269   0.0000000000000085   522-558   CCHHC domain  
  0.0000000000000129   141-185   CCHHC domain  
  0.0000000000000968   27-63   CCHHC domain  
  0.000000000000732   186-223   CCHHC domain  
  0.00000000471   500-521   CCHHC domain  
ENSP00000362226   0.0000000000000209   557-594   CCHHC domain  
ENSP00000362227   0.0000000000000719   551-589   CCHHC domain  
ENSP00000382111   9.94e-16   6-44   CCHHC domain  
  0.00000000000000106   58-101   CCHHC domain  
ENSP00000382114   0.00000000000000549   902-939   CCHHC domain  
  0.0000000000000101   29-67   CCHHC domain  
  0.0000000000000115   952-990   CCHHC domain  
  0.0000000000000127   1004-1047   CCHHC domain  
  0.000000000000068   503-546   CCHHC domain  
  0.00000000000196   548-585   CCHHC domain  
ENSP00000384219   0.00000000000000235   1-43   CCHHC domain  
ENSP00000396103   0.00000000000000549   900-937   CCHHC domain  
  0.00000000000000994   29-67   CCHHC domain  
  0.0000000000000115   950-988   CCHHC domain  
  0.0000000000000126   1002-1045   CCHHC domain  
  0.000000000000068   501-544   CCHHC domain  
  0.00000000000196   546-583   CCHHC domain  
ENSP00000398516   0.0000000000000798   619-657   CCHHC domain  
ENSP00000398961   0.000000000000051   182-222   CCHHC domain  
ENSP00000402107   0.0000000000000798   619-657   CCHHC domain  
ENSP00000409477   0.0000000000000327   26-66   CCHHC domain  
ENSP00000410139   0.0000000000000458   337-376   CCHHC domain  
ENSP00000413415   0.000000628   53-85   CCHHC domain  
ENSP00000423385   0.000000994   53-83   CCHHC domain  
ENSP00000424577   0.0000017   113-142   CCHHC domain  
ENSP00000428521   0.0000000000000915   365-409   CCHHC domain  
  0.000000000000811   410-445   CCHHC domain  
ENSP00000442412   0.00000000000000183   825-863   CCHHC domain  
  0.00000000000000589   868-906   CCHHC domain  
  0.0000000000000301   439-483   CCHHC domain  
  0.0000000000000798   917-953   CCHHC domain  
  0.000000000000222   27-63   CCHHC domain  
  0.000000000000301   970-1006   CCHHC domain  
  0.0000000000017   484-521   CCHHC domain  
ENSP00000473409   0.0000000000000144   157-200   CCHHC domain  
  0.000000000000366   202-240   CCHHC domain  
ENSP00000477771   0.00000000000000106   401-439   CCHHC domain  
  0.00000000000000327   444-482   CCHHC domain  
  0.000000000000017   16-60   CCHHC domain  
  0.0000000000000458   493-529   CCHHC domain  
  0.00000000000017   546-582   CCHHC domain  
  0.000000000000955   61-98   CCHHC domain  
ENSP00000478819   0.0000000000000085   522-558   CCHHC domain  
  0.0000000000000129   141-185   CCHHC domain  
  0.0000000000000968   27-63   CCHHC domain  
  0.000000000000732   186-223   CCHHC domain  
  0.00000000471   500-521   CCHHC domain  
ENSP00000480510   0.0000000000000085   522-558   CCHHC domain  
  0.0000000000000129   141-185   CCHHC domain  
  0.0000000000000968   27-63   CCHHC domain  
  0.000000000000732   186-223   CCHHC domain  
  0.00000000471   500-521   CCHHC domain  
ENSP00000481863   0.0000000000000085   522-558   CCHHC domain  
  0.0000000000000129   141-185   CCHHC domain  
  0.0000000000000968   27-63   CCHHC domain  
  0.000000000000732   186-223   CCHHC domain  
  0.00000000471   500-521   CCHHC domain  
ENSP00000483021   0.00000000000000183   825-863   CCHHC domain  
  0.00000000000000589   868-906   CCHHC domain  
  0.0000000000000301   439-483   CCHHC domain  
  0.0000000000000798   917-953   CCHHC domain  
  0.000000000000222   27-63   CCHHC domain  
  0.000000000000301   970-1006   CCHHC domain  
  0.0000000000017   484-521   CCHHC domain  

Pan troglodytes 76_2.1.4 has 22 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPTRP00000015934   0.0000000000000183   182-224   CCHHC domain  
ENSPTRP00000016759   0.00000000000109   378-421   CCHHC domain  
ENSPTRP00000023196   0.0000000000000719   551-589   CCHHC domain  
ENSPTRP00000034670   3.92e-16   722-765   CCHHC domain  
  0.00000000000000445   765-804   CCHHC domain  
  0.00000000000017   365-409   CCHHC domain  
  0.000000000000183   813-849   CCHHC domain  
  0.00000000000131   867-903   CCHHC domain  
  0.00000000000157   410-445   CCHHC domain  
ENSPTRP00000041793   0.00000000000000128   527-565   CCHHC domain  
  0.00000000000000405   570-608   CCHHC domain  
  0.0000000000000209   141-185   CCHHC domain  
  0.0000000000000562   619-655   CCHHC domain  
  0.00000000000017   27-63   CCHHC domain  
  0.000000000000235   672-707   CCHHC domain  
  0.00000000000118   186-223   CCHHC domain  
ENSPTRP00000055706   0.00000000000000549   899-936   CCHHC domain  
  0.00000000000000994   29-67   CCHHC domain  
  0.0000000000000115   949-987   CCHHC domain  
  0.0000000000000126   1001-1044   CCHHC domain  
  0.000000000000068   500-543   CCHHC domain  
  0.00000000000196   545-582   CCHHC domain  

Gorilla gorilla 76_3.1 has 34 significant domains in 8 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSGGOP00000001207   3.92e-16   722-765   CCHHC domain  
  0.00000000000000445   765-804   CCHHC domain  
  0.00000000000017   365-409   CCHHC domain  
  0.000000000000183   813-849   CCHHC domain  
  0.00000000000131   867-903   CCHHC domain  
  0.00000000000157   410-445   CCHHC domain  
ENSGGOP00000003426   0.0000000000000017   774-812   CCHHC domain  
  0.00000000000000549   817-855   CCHHC domain  
  0.0000000000000288   424-468   CCHHC domain  
  0.0000000000000759   866-902   CCHHC domain  
  0.000000000000209   27-63   CCHHC domain  
  0.000000000000275   919-955   CCHHC domain  
  0.00000000000157   469-506   CCHHC domain  
ENSGGOP00000006203   0.00000000000000144   630-668   CCHHC domain  
  0.00000000000000458   673-711   CCHHC domain  
  0.0000000000000248   271-315   CCHHC domain  
  0.0000000000000641   722-758   CCHHC domain  
  0.00000000000017   27-63   CCHHC domain  
  0.000000000000235   775-811   CCHHC domain  
  0.00000000000131   316-353   CCHHC domain  
ENSGGOP00000007314   0.0000000000000183   182-224   CCHHC domain  
ENSGGOP00000023942   0.00000000000000536   864-901   CCHHC domain  
  0.0000000000000111   914-952   CCHHC domain  
  0.0000000000000122   966-1009   CCHHC domain  
  0.0000000000000654   468-511   CCHHC domain  
  0.00000000000196   513-550   CCHHC domain  
ENSGGOP00000025796   0.0000000000000196   188-230   CCHHC domain  
ENSGGOP00000027235   0.0000000000000051   829-866   CCHHC domain  
  0.00000000000000929   29-67   CCHHC domain  
  0.0000000000000107   879-917   CCHHC domain  
  0.0000000000000118   931-974   CCHHC domain  
  0.0000000000000641   503-546   CCHHC domain  
  0.00000000000183   548-585   CCHHC domain  
ENSGGOP00000028715   0.0000000000000719   551-589   CCHHC domain  

Pongo abelii 76_2 has 22 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPPYP00000010014   0.0000000000000183   182-224   CCHHC domain  
ENSPPYP00000012582   0.00000000000000183   844-882   CCHHC domain  
  0.00000000000000602   887-925   CCHHC domain  
  0.0000000000000314   485-529   CCHHC domain  
  0.0000000000000824   936-972   CCHHC domain  
  0.000000000000222   74-110   CCHHC domain  
  0.000000000000301   989-1025   CCHHC domain  
  0.00000000000366   530-567   CCHHC domain  
ENSPPYP00000014161   0.00000000000000549   900-937   CCHHC domain  
  0.00000000000000994   29-67   CCHHC domain  
  0.0000000000000115   950-988   CCHHC domain  
  0.0000000000000126   1002-1045   CCHHC domain  
  0.000000000000068   501-544   CCHHC domain  
  0.00000000000196   546-583   CCHHC domain  
ENSPPYP00000023672   0.0000000000000183   176-218   CCHHC domain  
ENSPPYP00000024022   0.00000000000000183   797-835   CCHHC domain  
  0.00000000000000562   840-878   CCHHC domain  
  0.0000000000000301   438-482   CCHHC domain  
  0.0000000000000785   889-925   CCHHC domain  
  0.000000000000209   27-63   CCHHC domain  
  0.000000000000288   942-978   CCHHC domain  
  0.00000000000353   483-520   CCHHC domain  

Nomascus leucogenys 76_1.0 has 21 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSNLEP00000000875   3.92e-16   722-765   CCHHC domain  
  0.00000000000000445   765-804   CCHHC domain  
  0.00000000000017   365-409   CCHHC domain  
  0.000000000000183   813-849   CCHHC domain  
  0.00000000000157   410-445   CCHHC domain  
  0.0000000000017   867-903   CCHHC domain  
ENSNLEP00000003949   0.000000000000017   134-176   CCHHC domain  
ENSNLEP00000007955   0.0000000000000798   619-657   CCHHC domain  
ENSNLEP00000007958   0.0000000000000693   551-589   CCHHC domain  
ENSNLEP00000010372   0.00000000000000549   902-939   CCHHC domain  
  0.0000000000000101   29-67   CCHHC domain  
  0.0000000000000115   952-990   CCHHC domain  
  0.0000000000000127   1004-1047   CCHHC domain  
  0.000000000000068   503-546   CCHHC domain  
  0.00000000000196   548-585   CCHHC domain  
ENSNLEP00000012488   0.00000000000000157   650-688   CCHHC domain  
  0.00000000000000471   693-731   CCHHC domain  
  0.0000000000000248   291-335   CCHHC domain  
  0.0000000000000654   742-778   CCHHC domain  
  0.000000000000248   795-831   CCHHC domain  
  0.00000000000144   336-373   CCHHC domain  

Papio anubis 76 has 21 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPANP00000011988   3.92e-16   722-765   CCHHC domain  
  0.00000000000000445   765-804   CCHHC domain  
  0.00000000000017   365-409   CCHHC domain  
  0.000000000000183   813-849   CCHHC domain  
  0.00000000000157   410-445   CCHHC domain  
  0.0000000000017   867-903   CCHHC domain  
ENSPANP00000012806   6.54e-16   706-748   CCHHC domain  
  0.00000000000000458   749-786   CCHHC domain  
  0.00000000000000981   799-837   CCHHC domain  
  0.0000000000000109   851-894   CCHHC domain  
  0.0000000000000589   329-372   CCHHC domain  
  0.0000000000017   374-411   CCHHC domain  
ENSPANP00000014384   0.00000000000000196   857-895   CCHHC domain  
  0.00000000000000615   900-938   CCHHC domain  
  0.0000000000000314   498-542   CCHHC domain  
  0.0000000000000837   949-985   CCHHC domain  
  0.000000000000222   102-138   CCHHC domain  
  0.000000000000301   1002-1038   CCHHC domain  
  0.0000000000017   543-580   CCHHC domain  
ENSPANP00000017715   0.0000000000000863   687-725   CCHHC domain  
ENSPANP00000020135   0.0000000000000196   186-228   CCHHC domain  

Macaca mulatta 76_1 has 27 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMMUP00000003092   0.0000000000000017   768-806   CCHHC domain  
  0.00000000000000549   811-849   CCHHC domain  
  0.0000000000000288   409-453   CCHHC domain  
  0.0000000000000759   860-896   CCHHC domain  
  0.000000000000209   27-63   CCHHC domain  
  0.000000000000275   913-949   CCHHC domain  
  0.00000000000157   454-491   CCHHC domain  
ENSMMUP00000003093   0.00000000000000824   522-558   CCHHC domain  
  0.0000000000000116   141-185   CCHHC domain  
  0.0000000000000942   27-63   CCHHC domain  
  0.000000000000654   186-223   CCHHC domain  
  0.00000000445   500-521   CCHHC domain  
ENSMMUP00000010185   0.0000000000000144   149-192   CCHHC domain  
  0.000000000000353   194-232   CCHHC domain  
ENSMMUP00000011065   3.79e-16   693-736   CCHHC domain  
  0.00000000000000432   736-775   CCHHC domain  
  0.00000000000017   337-381   CCHHC domain  
  0.000000000000183   784-820   CCHHC domain  
  0.00000000000144   382-417   CCHHC domain  
  0.0000000000017   838-874   CCHHC domain  
ENSMMUP00000012196   0.00000000000000235   1-43   CCHHC domain  
ENSMMUP00000012198   0.00000000000000549   903-940   CCHHC domain  
  0.0000000000000101   29-67   CCHHC domain  
  0.0000000000000115   953-991   CCHHC domain  
  0.0000000000000127   1005-1048   CCHHC domain  
  0.0000000000000693   504-547   CCHHC domain  
  0.00000000000196   549-586   CCHHC domain  

Callithrix jacchus 76_3.2.1 has 39 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCJAP00000007223   0.0000000000000798   619-657   CCHHC domain  
ENSCJAP00000013085   0.0000000000000183   182-224   CCHHC domain  
ENSCJAP00000013088   0.0000000000000183   178-220   CCHHC domain  
ENSCJAP00000013638   0.000000000000353   6-43   CCHHC domain  
ENSCJAP00000013642   0.00000000000000523   851-888   CCHHC domain  
  0.00000000000000955   29-67   CCHHC domain  
  0.000000000000011   901-939   CCHHC domain  
  0.000000000000012   953-996   CCHHC domain  
  0.0000000000000654   449-492   CCHHC domain  
  0.00000000000183   494-531   CCHHC domain  
ENSCJAP00000013651   0.00000000000000549   907-944   CCHHC domain  
  0.0000000000000101   29-67   CCHHC domain  
  0.0000000000000116   957-995   CCHHC domain  
  0.0000000000000127   1009-1052   CCHHC domain  
  0.0000000000000693   505-548   CCHHC domain  
  0.00000000000196   550-587   CCHHC domain  
ENSCJAP00000013655   0.00000000000000235   242-283   CCHHC domain  
ENSCJAP00000026935   4.45e-16   705-747   CCHHC domain  
  0.00000000000000719   748-787   CCHHC domain  
  0.000000000000157   796-832   CCHHC domain  
  0.000000000000183   345-389   CCHHC domain  
  0.0000000000017   850-886   CCHHC domain  
  0.00000000000183   390-425   CCHHC domain  
ENSCJAP00000026947   3.14e-16   448-490   CCHHC domain  
  0.00000000000000497   491-530   CCHHC domain  
  0.000000000000106   539-575   CCHHC domain  
  0.000000000000126   77-121   CCHHC domain  
  0.00000000000118   593-629   CCHHC domain  
  0.00000000000129   122-157   CCHHC domain  
ENSCJAP00000026959   0.0000000000000222   450-488   CCHHC domain  
  0.0000000000000745   77-121   CCHHC domain  
  0.000000000000719   122-157   CCHHC domain  
  0.00000000392   429-450   CCHHC domain  
ENSCJAP00000026967   4.58e-16   722-764   CCHHC domain  
  0.00000000000000732   765-804   CCHHC domain  
  0.000000000000157   813-849   CCHHC domain  
  0.000000000000183   365-409   CCHHC domain  
  0.0000000000017   867-903   CCHHC domain  
  0.00000000000196   410-445   CCHHC domain  

Otolemur garnettii 76_3 has 21 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOGAP00000000937   0.0000000000000183   182-224   CCHHC domain  
ENSOGAP00000005542   0.00000000000102   378-421   CCHHC domain  
ENSOGAP00000009142   0.00000000000000523   857-894   CCHHC domain  
  0.000000000000011   907-945   CCHHC domain  
  0.000000000000012   959-1002   CCHHC domain  
  0.0000000000000654   458-501   CCHHC domain  
  0.00000000000196   503-540   CCHHC domain  
ENSOGAP00000010274   0.00000000000000183   806-844   CCHHC domain  
  0.00000000000000575   849-887   CCHHC domain  
  0.0000000000000275   418-462   CCHHC domain  
  0.0000000000000785   898-934   CCHHC domain  
  0.000000000000222   27-63   CCHHC domain  
  0.000000000000314   951-986   CCHHC domain  
  0.0000000000017   463-499   CCHHC domain  
ENSOGAP00000010783   3.4e-16   691-734   CCHHC domain  
  0.00000000000000392   734-773   CCHHC domain  
  0.000000000000144   782-818   CCHHC domain  
  0.000000000000157   334-378   CCHHC domain  
  0.00000000000128   379-414   CCHHC domain  
  0.00000000000144   836-872   CCHHC domain  
ENSOGAP00000012969   0.0000000000000562   619-658   CCHHC domain  

Microcebus murinus 76_1 has 20 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMICP00000000796   0.0000000000000116   927-970   CCHHC domain  
  0.0000000000000628   426-469   CCHHC domain  
  0.00000000000183   471-508   CCHHC domain  
  0.0000000000497   879-913   CCHHC domain  
  0.00000000497   10-33   CCHHC domain  
ENSMICP00000003039   0.00000000000000183   790-828   CCHHC domain  
  0.00000000000000562   833-871   CCHHC domain  
  0.0000000000000301   431-475   CCHHC domain  
  0.000000000000262   882-915   CCHHC domain  
  0.0000000000017   476-513   CCHHC domain  
  0.0000000327   27-51   CCHHC domain  
ENSMICP00000003372   5.75e-16   721-762   CCHHC domain  
  0.0000000000000129   764-800   CCHHC domain  
  0.00000000000017   365-409   CCHHC domain  
  0.00000000000157   410-445   CCHHC domain  
  0.0000000000017   866-902   CCHHC domain  
ENSMICP00000005572   0.00000575   522-562   CCHHC domain  
ENSMICP00000013808   0.000000000000051   551-590   CCHHC domain  
ENSMICP00000014239   0.000000000000615   377-421   CCHHC domain  
ENSMICP00000015020   0.0000000000000183   176-218   CCHHC domain  

Rattus norvegicus 76_5.0 has 27 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSRNOP00000005905   0.0000000000000101   29-67   CCHHC domain  
  0.0000000000000127   1003-1046   CCHHC domain  
  0.0000000000000301   951-989   CCHHC domain  
  0.0000000000000562   502-546   CCHHC domain  
  0.00000000000183   547-584   CCHHC domain  
  0.00000000000235   901-932   CCHHC domain  
ENSRNOP00000029608   0.00000000000017   182-221   CCHHC domain  
ENSRNOP00000032420   0.00000000000000144   595-633   CCHHC domain  
  0.00000000000000549   638-676   CCHHC domain  
  0.0000000000000262   236-280   CCHHC domain  
  0.0000000000000562   687-723   CCHHC domain  
  0.000000000000222   740-776   CCHHC domain  
  0.000000000000942   281-319   CCHHC domain  
ENSRNOP00000033062   0.000000000000288   299-344   CCHHC domain  
ENSRNOP00000045413   0.0000000000000101   29-67   CCHHC domain  
  0.0000000000000127   1001-1044   CCHHC domain  
  0.0000000000000301   949-987   CCHHC domain  
  0.0000000000000562   502-546   CCHHC domain  
  0.00000000000183   547-584   CCHHC domain  
  0.00000000000222   899-930   CCHHC domain  
ENSRNOP00000049326   0.0000000000000785   625-663   CCHHC domain  
ENSRNOP00000056380   3.66e-16   699-742   CCHHC domain  
  0.00000000000000484   742-781   CCHHC domain  
  0.000000000000157   342-386   CCHHC domain  
  0.000000000000301   790-826   CCHHC domain  
  0.000000000000759   844-882   CCHHC domain  
  0.00000000000101   387-423   CCHHC domain  

Mus musculus 76_38 has 87 significant domains in 20 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000021009   0.00000000000000549   901-938   CCHHC domain  
  0.0000000000000101   29-67   CCHHC domain  
  0.0000000000000115   951-989   CCHHC domain  
  0.0000000000000127   1003-1046   CCHHC domain  
  0.0000000000000562   502-546   CCHHC domain  
  0.00000000000183   547-584   CCHHC domain  
ENSMUSP00000042056   3.66e-16   720-763   CCHHC domain  
  0.00000000000000497   763-802   CCHHC domain  
  0.00000000000017   363-407   CCHHC domain  
  0.000000000000288   811-847   CCHHC domain  
  0.000000000000785   865-903   CCHHC domain  
  0.00000000000103   408-444   CCHHC domain  
ENSMUSP00000044038   0.0000000000000876   625-663   CCHHC domain  
ENSMUSP00000058264   0.00000000000000549   903-940   CCHHC domain  
  0.0000000000000101   29-67   CCHHC domain  
  0.0000000000000115   953-991   CCHHC domain  
  0.0000000000000127   1005-1048   CCHHC domain  
  0.0000000000000562   504-548   CCHHC domain  
  0.00000000000183   549-586   CCHHC domain  
ENSMUSP00000072416   0.000000000000051   184-224   CCHHC domain  
ENSMUSP00000079900   0.00000000000000183   842-880   CCHHC domain  
  0.00000000000000732   885-923   CCHHC domain  
  0.0000000000000353   483-527   CCHHC domain  
  0.0000000000000745   934-970   CCHHC domain  
  0.000000000000157   69-106   CCHHC domain  
  0.000000000000301   987-1023   CCHHC domain  
  0.00000000000124   528-566   CCHHC domain  
ENSMUSP00000090441   0.0000000000000196   184-226   CCHHC domain  
ENSMUSP00000099448   0.0000000000000445   123-163   CCHHC domain  
ENSMUSP00000103361   0.000000000000051   182-222   CCHHC domain  
ENSMUSP00000103362   0.0000000000000183   182-224   CCHHC domain  
ENSMUSP00000104387   0.00000000000000183   800-838   CCHHC domain  
  0.00000000000000693   843-881   CCHHC domain  
  0.0000000000000327   441-485   CCHHC domain  
  0.0000000000000706   892-928   CCHHC domain  
  0.000000000000144   27-64   CCHHC domain  
  0.000000000000288   945-981   CCHHC domain  
  0.00000000000119   486-524   CCHHC domain  
ENSMUSP00000104388   0.0000000000000017   762-800   CCHHC domain  
  0.00000000000000667   805-843   CCHHC domain  
  0.0000000000000262   441-485   CCHHC domain  
  0.000000000000068   854-890   CCHHC domain  
  0.000000000000144   27-64   CCHHC domain  
  0.000000000000275   907-943   CCHHC domain  
  0.00000051   486-509   CCHHC domain  
ENSMUSP00000115697   0.00000000000000314   504-541   CCHHC domain  
  0.0000000000000209   145-189   CCHHC domain  
  0.0000000000000458   552-588   CCHHC domain  
  0.000000000000183   605-641   CCHHC domain  
  0.000000000000772   190-228   CCHHC domain  
ENSMUSP00000117789   3.66e-16   720-763   CCHHC domain  
  0.00000000000000497   763-802   CCHHC domain  
  0.00000000000017   363-407   CCHHC domain  
  0.000000000000288   811-847   CCHHC domain  
  0.000000000000785   865-903   CCHHC domain  
  0.00000000000103   408-444   CCHHC domain  
ENSMUSP00000118322   3.66e-16   720-763   CCHHC domain  
  0.00000000000000497   763-802   CCHHC domain  
  0.00000000000017   363-407   CCHHC domain  
  0.000000000000288   811-847   CCHHC domain  
  0.000000000000785   865-903   CCHHC domain  
  0.00000000000103   408-444   CCHHC domain  
ENSMUSP00000120298   3.66e-16   720-763   CCHHC domain  
  0.00000000000000497   763-802   CCHHC domain  
  0.00000000000017   363-407   CCHHC domain  
  0.000000000000288   811-847   CCHHC domain  
  0.000000000000785   865-903   CCHHC domain  
  0.00000000000103   408-444   CCHHC domain  
ENSMUSP00000121394   1.96e-16   40-78   CCHHC domain  
  0.0000000000000405   89-120   CCHHC domain  
ENSMUSP00000122011   0.0000000000000105   556-592   CCHHC domain  
  0.0000000000000157   175-219   CCHHC domain  
  0.0000000000000667   61-98   CCHHC domain  
  0.000000000000549   220-258   CCHHC domain  
  0.00000000445   534-555   CCHHC domain  
ENSMUSP00000122055   3.66e-16   720-763   CCHHC domain  
  0.00000000000000497   763-802   CCHHC domain  
  0.00000000000017   363-407   CCHHC domain  
  0.000000000000288   811-847   CCHHC domain  
  0.000000000000785   865-903   CCHHC domain  
  0.00000000000103   408-444   CCHHC domain  
ENSMUSP00000131417   3.66e-16   720-763   CCHHC domain  
  0.00000000000000497   763-802   CCHHC domain  
  0.00000000000017   363-407   CCHHC domain  
  0.000000000000288   811-847   CCHHC domain  
  0.000000000000785   865-903   CCHHC domain  
  0.00000000000103   408-444   CCHHC domain  
 
Weak hits:
ENSMUSP00000140943   0.0314   22-46   CCHHC domain  
ENSMUSP00000141101   0.0615   22-45   CCHHC domain  

Dipodomys ordii 76_1 has 20 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSDORP00000002477   3.92e-16   723-766   CCHHC domain  
  0.00000000000000445   766-805   CCHHC domain  
  0.00000000000017   365-409   CCHHC domain  
  0.000000000000209   814-850   CCHHC domain  
  0.0000000000017   868-904   CCHHC domain  
  0.00000000000209   410-444   CCHHC domain  
ENSDORP00000002550   0.0000000000000405   528-565   CCHHC domain  
ENSDORP00000003809   0.0000000000000116   957-995   CCHHC domain  
  0.0000000000000127   1009-1052   CCHHC domain  
  0.0000000000000183   908-944   CCHHC domain  
  0.0000000000000549   508-552   CCHHC domain  
  0.000000706   553-576   CCHHC domain  
ENSDORP00000006015   0.0000000000000017   802-841   CCHHC domain  
  0.00000000000000615   845-883   CCHHC domain  
  0.0000000000000301   443-487   CCHHC domain  
  0.0000000000000785   894-930   CCHHC domain  
  0.000000000000235   27-63   CCHHC domain  
  0.000000000000628   947-983   CCHHC domain  
  0.0000000000017   488-525   CCHHC domain  
ENSDORP00000013097   0.0000667   556-597   CCHHC domain  

Ictidomys tridecemlineatus 76_2 has 20 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSTOP00000001207   0.00000000000000536   919-956   CCHHC domain  
  0.0000000000000102   29-67   CCHHC domain  
  0.0000000000000111   1021-1064   CCHHC domain  
  0.0000000000000118   969-1007   CCHHC domain  
  0.0000000000000523   520-564   CCHHC domain  
  0.00000000000196   565-602   CCHHC domain  
ENSSTOP00000007288   0.0000000000000017   838-877   CCHHC domain  
  0.00000000000000589   881-919   CCHHC domain  
  0.0000000000000314   479-523   CCHHC domain  
  0.0000000000000811   930-966   CCHHC domain  
  0.000000000000262   62-97   CCHHC domain  
  0.000000000000301   983-1019   CCHHC domain  
  0.00000000000262   524-558   CCHHC domain  
ENSSTOP00000010473   0.0000000000000562   628-667   CCHHC domain  
ENSSTOP00000014771   0.0000000000000105   759-796   CCHHC domain  
  0.00000000000017   365-409   CCHHC domain  
  0.000000000000209   805-841   CCHHC domain  
  0.00000000000157   410-445   CCHHC domain  
  0.0000000000017   859-895   CCHHC domain  
ENSSTOP00000015280   0.0000000000000183   182-224   CCHHC domain  

Heterocephalus glaber v1.7-2 has 15 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
HGL_H00000259021   0.0000000000000183   182-224   CCHHC domain  
HGL_H00000276480   3.79e-16   692-735   CCHHC domain  
  0.00000000000000432   735-774   CCHHC domain  
  0.00000000000017   335-379   CCHHC domain  
  0.000000000000222   783-819   CCHHC domain  
  0.0000000000017   380-415   CCHHC domain  
  0.0000000000017   837-873   CCHHC domain  
HGL_H00000327465   0.0000000000000017   828-867   CCHHC domain  
  0.00000000000000889   871-908   CCHHC domain  
  0.0000000000000288   469-513   CCHHC domain  
  0.0000000000000824   920-956   CCHHC domain  
  0.000000000000222   89-125   CCHHC domain  
  0.000000000000353   973-1009   CCHHC domain  
  0.0000000000017   514-550   CCHHC domain  
HGL_H00000362227   0.0000000000000575   651-690   CCHHC domain  

Cavia porcellus 76_3 has 21 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCPOP00000001650   0.0000000000000183   182-224   CCHHC domain  
ENSCPOP00000004940   3.53e-16   722-765   CCHHC domain  
  0.00000000000000275   765-806   CCHHC domain  
  0.000000000000157   365-409   CCHHC domain  
  0.000000000000353   813-849   CCHHC domain  
  0.00000000000131   410-445   CCHHC domain  
  0.00000000000157   867-903   CCHHC domain  
ENSCPOP00000006120   0.0000000000000017   749-787   CCHHC domain  
  0.00000000000000667   792-830   CCHHC domain  
  0.0000000000000288   390-434   CCHHC domain  
  0.0000000000000745   841-877   CCHHC domain  
  0.000000000000262   27-62   CCHHC domain  
  0.000000000000275   894-930   CCHHC domain  
  0.00000000000157   435-472   CCHHC domain  
ENSCPOP00000008034   0.000000000000288   542-581   CCHHC domain  
ENSCPOP00000011924   0.0000000000000115   954-992   CCHHC domain  
  0.0000000000000127   1006-1049   CCHHC domain  
  0.000000000000051   503-547   CCHHC domain  
  0.0000000000000641   29-65   CCHHC domain  
  0.00000000000183   548-585   CCHHC domain  
  0.00000000000222   904-941   CCHHC domain  

Oryctolagus cuniculus 76_2 has 26 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOCUP00000000581   0.0000000000000183   182-224   CCHHC domain  
ENSOCUP00000005761   0.0000000000000889   428-466   CCHHC domain  
ENSOCUP00000011433   3.92e-16   722-765   CCHHC domain  
  0.00000000000000445   765-804   CCHHC domain  
  0.00000000000017   813-849   CCHHC domain  
  0.000000000000183   365-409   CCHHC domain  
  0.00000000000157   410-445   CCHHC domain  
  0.0000000000017   867-903   CCHHC domain  
ENSOCUP00000014414   0.00000000000000523   897-934   CCHHC domain  
  0.00000000000000994   29-67   CCHHC domain  
  0.0000000000000115   947-985   CCHHC domain  
  0.0000000000000126   999-1042   CCHHC domain  
  0.000000000000051   499-543   CCHHC domain  
  0.00000000000183   544-581   CCHHC domain  
ENSOCUP00000021160   0.00000000000000183   782-820   CCHHC domain  
  0.00000000000000562   825-863   CCHHC domain  
  0.0000000000000288   433-477   CCHHC domain  
  0.0000000000000772   874-910   CCHHC domain  
  0.000000000000209   27-63   CCHHC domain  
  0.000000000000275   927-963   CCHHC domain  
  0.00000000353   478-514   CCHHC domain  
ENSOCUP00000021985   0.00000000000000445   740-777   CCHHC domain  
  0.00000000000000994   790-828   CCHHC domain  
  0.0000000000000109   842-885   CCHHC domain  
  0.0000000000000432   342-386   CCHHC domain  
  0.00000000000157   387-424   CCHHC domain  

Ochotona princeps 76 has 21 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOPRP00000001241   3.92e-16   723-766   CCHHC domain  
  0.00000000000000445   766-805   CCHHC domain  
  0.000000000000144   814-850   CCHHC domain  
  0.00000000000017   368-412   CCHHC domain  
  0.0000000000017   868-904   CCHHC domain  
  0.00000000000209   413-447   CCHHC domain  
ENSOPRP00000002220   0.0000275   419-453   CCHHC domain  
ENSOPRP00000003575   0.00000589   504-544   CCHHC domain  
ENSOPRP00000006602   0.0000000000000183   182-224   CCHHC domain  
ENSOPRP00000007081   0.00000000000000418   713-750   CCHHC domain  
  0.00000000000000772   29-67   CCHHC domain  
  0.0000000000000392   315-359   CCHHC domain  
  0.000000000000366   763-796   CCHHC domain  
  0.00000000000144   360-397   CCHHC domain  
ENSOPRP00000013916   0.00000000000000301   780-819   CCHHC domain  
  0.00000000000000471   823-861   CCHHC domain  
  0.0000000000000288   428-472   CCHHC domain  
  0.0000000000000654   872-908   CCHHC domain  
  0.000000000000222   925-961   CCHHC domain  
  0.000000000000392   39-73   CCHHC domain  
  0.00000000000209   473-508   CCHHC domain  
 
Weak hits:
ENSOPRP00000008677   0.0445   194-214   CCHHC domain  

Tupaia belangeri 76 has 14 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTBEP00000001186   0.0000000000000144   799-836   CCHHC domain  
  0.0000000000000745   847-883   CCHHC domain  
  0.000000000000288   900-935   CCHHC domain  
  0.000000000000785   441-478   CCHHC domain  
  0.00000000000432   1-32   CCHHC domain  
ENSTBEP00000007534   0.0000000000000144   720-756   CCHHC domain  
  0.000000000000536   320-356   CCHHC domain  
ENSTBEP00000012307   0.000000000000115   352-391   CCHHC domain  
ENSTBEP00000013963   0.00000000000000288   713-756   CCHHC domain  
  0.00000000000000915   756-793   CCHHC domain  
  0.000000000000183   365-409   CCHHC domain  
  0.000000000000301   804-840   CCHHC domain  
  0.0000000235   410-443   CCHHC domain  
  0.000000615   858-881   CCHHC domain  

Sus scrofa 76_10.2 has 15 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSSCP00000006679   3.92e-16   719-762   CCHHC domain  
  0.00000000000000262   762-801   CCHHC domain  
  0.000000000000209   810-846   CCHHC domain  
  0.000000000000301   361-405   CCHHC domain  
  0.00000000000157   406-441   CCHHC domain  
  0.00000000262   864-899   CCHHC domain  
ENSSSCP00000007846   0.00000000000000445   99-139   CCHHC domain  
ENSSSCP00000009222   0.00000000000000536   890-927   CCHHC domain  
  0.00000000000000994   29-67   CCHHC domain  
  0.0000000000000114   940-978   CCHHC domain  
  0.0000000000000124   992-1035   CCHHC domain  
  0.0000000000000497   491-535   CCHHC domain  
  0.00000000000183   536-573   CCHHC domain  
ENSSSCP00000009223   0.0000000000000034   29-68   CCHHC domain  
ENSSSCP00000018601   0.0000000000000183   182-224   CCHHC domain  

Bos taurus 76_3.1 has 17 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSBTAP00000004603   0.0000000000000288   451-495   CCHHC domain  
  0.00000000000116   496-533   CCHHC domain  
ENSBTAP00000007308   3.66e-16   697-740   CCHHC domain  
  0.0000000000000051   740-779   CCHHC domain  
  0.000000000000183   342-386   CCHHC domain  
  0.000000000000209   788-824   CCHHC domain  
  0.00000000000157   387-422   CCHHC domain  
  0.0000000000017   842-878   CCHHC domain  
ENSBTAP00000023131   0.00000772   532-572   CCHHC domain  
ENSBTAP00000024887   0.0000000000000183   182-224   CCHHC domain  
ENSBTAP00000038860   0.00000000000000157   773-812   CCHHC domain  
  0.00000000000000602   816-854   CCHHC domain  
  0.0000000000000288   414-458   CCHHC domain  
  0.0000000000000759   865-901   CCHHC domain  
  0.000000000000418   919-954   CCHHC domain  
  0.000000000000432   27-62   CCHHC domain  
  0.00000000000157   459-496   CCHHC domain  

Ovis aries 76_3.1 has 20 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOARP00000003381   0.0000000000000209   203-242   CCHHC domain  
ENSOARP00000005703   0.00000000000000497   680-717   CCHHC domain  
  0.0000000000000157   730-768   CCHHC domain  
  0.0000000000000418   289-333   CCHHC domain  
  0.000000602   334-356   CCHHC domain  
ENSOARP00000006067   0.0000000000000183   182-224   CCHHC domain  
ENSOARP00000006068   0.0000000000000196   188-230   CCHHC domain  
ENSOARP00000008550   0.00000000000000103   776-816   CCHHC domain  
  0.0000000000000288   416-460   CCHHC domain  
  0.0000000000000772   871-907   CCHHC domain  
  0.000000000000418   925-960   CCHHC domain  
  0.00000000000157   461-498   CCHHC domain  
  0.00000000000327   819-859   CCHHC domain  
  0.000000000068   27-62   CCHHC domain  
ENSOARP00000014378   4.97e-16   707-750   CCHHC domain  
  0.00000000000000418   750-789   CCHHC domain  
  0.000000000000183   350-394   CCHHC domain  
  0.000000000000209   798-834   CCHHC domain  
  0.00000000000157   395-430   CCHHC domain  
  0.0000000000017   852-888   CCHHC domain  

Vicugna pacos 76_1 has 4 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSVPAP00000000574   0.0000000000000183   182-224   CCHHC domain  
ENSVPAP00000002764   0.00000562   556-596   CCHHC domain  
ENSVPAP00000009845   0.000000000102   639-673   CCHHC domain  
  0.000000017   687-711   CCHHC domain  

Tursiops truncatus 76_1 has 21 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTTRP00000000444   0.0000000000000183   182-224   CCHHC domain  
ENSTTRP00000008143   0.00000000000000549   896-933   CCHHC domain  
  0.0000000000000115   946-984   CCHHC domain  
  0.0000000000000126   998-1041   CCHHC domain  
  0.000000000000051   502-546   CCHHC domain  
  0.00000000000183   547-584   CCHHC domain  
  0.0000000000615   29-61   CCHHC domain  
ENSTTRP00000012189   0.000000000000051   546-585   CCHHC domain  
ENSTTRP00000012722   0.00000000000000157   749-788   CCHHC domain  
  0.00000000000000589   792-830   CCHHC domain  
  0.0000000000000262   394-438   CCHHC domain  
  0.000000000000085   841-877   CCHHC domain  
  0.000000000000275   894-930   CCHHC domain  
  0.000000000000575   27-61   CCHHC domain  
  0.00000000000157   439-475   CCHHC domain  
ENSTTRP00000014582   3.66e-16   728-771   CCHHC domain  
  0.00000000000000523   771-810   CCHHC domain  
  0.000000000000183   371-415   CCHHC domain  
  0.000000000000222   819-855   CCHHC domain  
  0.00000000000157   416-451   CCHHC domain  
  0.0000000000017   873-909   CCHHC domain  

Mustela putorius furo 76_1.0 has 21 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMPUP00000006867   4.18e-16   754-797   CCHHC domain  
  0.00000000000000196   797-837   CCHHC domain  
  0.000000000000183   396-440   CCHHC domain  
  0.000000000000248   845-881   CCHHC domain  
  0.00000000000157   441-476   CCHHC domain  
  0.00000000000183   899-935   CCHHC domain  
ENSMPUP00000008670   0.00000000000000131   614-653   CCHHC domain  
  0.00000000000000889   657-694   CCHHC domain  
  0.0000000000000235   238-282   CCHHC domain  
  0.0000000000000811   706-742   CCHHC domain  
  0.000000000000549   759-793   CCHHC domain  
  0.00000000000131   283-320   CCHHC domain  
ENSMPUP00000012846   0.00000000000000458   867-909   CCHHC domain  
  0.00000000000000523   910-947   CCHHC domain  
  0.0000000000000101   29-67   CCHHC domain  
  0.0000000000000116   960-998   CCHHC domain  
  0.0000000000000127   1012-1055   CCHHC domain  
  0.000000000000051   491-535   CCHHC domain  
  0.00000000000196   536-573   CCHHC domain  
ENSMPUP00000015299   0.0000000000000183   182-224   CCHHC domain  
ENSMPUP00000017579   0.000000000000288   646-685   CCHHC domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   35807 35807
No Yes Homo sapiens 76_38 Human 83 26
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 22 6
No Yes Gorilla gorilla 76_3.1 Western gorilla 34 8
No Yes Pongo abelii 76_2 Sumatran orangutan 22 5
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 21 6
No Yes Papio anubis 76 Olive baboon 21 5
No Yes Macaca mulatta 76_1 Rhesus monkey 27 6
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 39 11
No Yes Otolemur garnettii 76_3 Small-eared galago 21 6
No Yes Microcebus murinus 76_1 Gray mouse lemur 20 7
No Yes Rattus norvegicus 76_5.0 Norway rat 27 7
No Yes Mus musculus 76_38 House mouse 87 20
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 20 5
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 20 5
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 15 4
No Yes Cavia porcellus 76_3 Domestic guinea pig 21 5
No Yes Oryctolagus cuniculus 76_2 Rabbit 26 6
No Yes Ochotona princeps 76 American pika 21 6
No Yes Tupaia belangeri 76 Northern tree shrew 14 4
No Yes Sus scrofa 76_10.2 Pig 15 5
No Yes Bos taurus 76_3.1 Cattle 17 5
No Yes Ovis aries 76_3.1 Sheep 20 6
No Yes Vicugna pacos 76_1 Alpaca 4 3
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 21 5
No Yes Mustela putorius furo 76_1.0 Domestic ferret 21 5
No Yes Ailuropoda melanoleuca 76_1 Giant panda 27 7
No Yes Canis familiaris 76_3.1 Dog 36 9
No Yes Felis catus 76_6.2 Domestic cat 20 4
No Yes Equus caballus 76_2 Horse 22 6
No Yes Myotis lucifugus 76_2.0 Little brown bat 21 5
No Yes Pteropus vampyrus 76_1 Large flying fox 18 5
No Yes Sorex araneus 76_1 European shrew 9 2
No Yes Erinaceus europaeus 76 Western European hedgehog 14 6
No Yes Procavia capensis 76_1 Cape rock hyrax 18 5
No Yes Loxodonta africana 76_3 African savanna elephant 33 8
No Yes Echinops telfairi 76 Small Madagascar hedgehog 12 4
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 24 5
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 11 4
No Yes Macropus eugenii 76_1.0 Tammar wallaby 15 4
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 26 7
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 21 5
No Yes Ornithorhynchus anatinus 76_5 Platypus 21 5
No Yes Saccoglossus kowalevskii v3.0   78 31
No Yes Petromyzon marinus 76_7.0 Sea lamprey 12 5
No Yes Meleagris gallopavo 76_2 Turkey 20 7
No Yes Gallus gallus 76_4 Chicken 22 5
No Yes Anas platyrhynchos 76_1.0 Mallard 22 6
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 23 6
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 20 5
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 23 7
No Yes Anolis carolinensis 76_2.0 Green anole 26 6
No Yes Xenopus laevis African clawed frog 35 10
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 21 6
No Yes Latimeria chalumnae 76_1 Coelacanth 22 7
No Yes Lepisosteus oculatus 76 Spotted gar 52 11
No Yes Gadus morhua 76_1 Atlantic cod 28 9
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 43 11
No Yes Takifugu rubripes 76_4 Torafugu 147 42
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 35 10
No Yes Oryzias latipes 76_1 Japanese medaka 36 9
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 29 8
No Yes Poecilia formosa 76 Amazon molly 33 9
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 62 16
No Yes Astyanax mexicanus 76 Mexican tetra 37 8
No Yes Danio rerio 76_9 Zebrafish 59 19
No Yes Oikopleura dioica   5 3
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 6 3
No Yes Ciona intestinalis 76 Vase tunicate 6 3
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 11 4
No Yes Octopus bimaculoides 280   8 6
No Yes Crassostrea gigas 22 Pacific oyster 8 5
No Yes Lottia gigantea Owl limpet 8 2
No Yes Helobdella robusta   4 3
No Yes Capitella sp. I   10 5
No Yes Danaus plexippus OGS1.0 Monarch butterfly 4 2
No Yes Heliconius melpomene Postman butterfly 6 2
No Yes Bombyx mori Domestic silkworm 3 2
No Yes Nasonia vitripennis Jewel wasp 6 2
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 12 7
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 6 2
No Yes Linepithema humile v1.1 Argentine ant 6 2
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 6 6
No Yes Solenopsis invicta v.2.2.3 Red fire ant 6 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 6 2
No Yes Atta cephalotes v1.1   4 3
No Yes Camponotus floridanus v3.3 Florida carpenter ant 7 2
No Yes Lucilia cuprina Australian sheep blowfly 6 3
No Yes Drosophila grimshawi 1.3   4 2
No Yes Drosophila willistoni 1.3   4 2
No Yes Drosophila pseudoobscura 2.13   4 2
No Yes Drosophila persimilis 1.3   4 3
No Yes Drosophila suzukii   4 2
No Yes Drosophila yakuba 1.3   4 2
No Yes Drosophila simulans 1.3   2 2
No Yes Drosophila sechellia 1.3   4 2
No Yes Drosophila melanogaster 76_5 Fruit fly 17 8
No Yes Drosophila erecta 1.3   1 1
No Yes Drosophila ananassae 1.3   4 2
No Yes Drosophila virilis 1.2   4 2
No Yes Drosophila mojavensis 1.3   3 2
No Yes Megaselia scalaris 22   4 3
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 8 3
No Yes Culex pipiens quinquefasciatus Southern house mosquito 5 2
No Yes Anopheles darlingi 22 American malaria mosquito 1 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 7 3
No Yes Tribolium castaneum 3.0 Red flour beetle 7 4
No Yes Pediculus humanus corporis (Early assembly) Human body louse 9 3
No Yes Acyrthosiphon pisum Pea aphid 2 2
No Yes Rhodnius prolixus 22   2 2
No Yes Daphnia pulex Common water flea 5 3
No Yes Strigamia maritima 22   9 4
No Yes Sarcoptes scabiei   3 2
No Yes Tetranychus urticae Two-spotted spider mite 6 3
No Yes Ixodes scapularis (Preliminary) Black-legged tick 4 2
No Yes Meloidogyne incognita Southern root-knot nematode 2 1
No Yes Onchocerca volvulus 22   2 1
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 1 1
No Yes Caenorhabditis japonica   2 1
No Yes Caenorhabditis brenneri   5 3
No Yes Caenorhabditis remanei   3 2
No Yes Caenorhabditis elegans 76_235 Roundworm 4 2
No Yes Caenorhabditis briggsae 2   2 1
No Yes Trichinella spiralis 22   3 1
No Yes Hymenolepis microstoma   3 2
No Yes Echinococcus multilocularis   3 2
No Yes Echinococcus granulosus   3 2
No Yes Taenia solium Pork tapeworm 2 2
No Yes Schistosoma mansoni   3 2
No Yes Acropora digitifera v1.0   5 4
No Yes Nematostella vectensis 1.0 Starlet sea anemone 6 3
No Yes Hydra vulgaris   2 2
No Yes Amphimedon queenslandica   2 1
No Yes Monosiga brevicollis   1 1
No Yes Sphaeroforma arctica JP610   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 23 8
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 4 2
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 8 3
No Yes Ascaris suum Victoria/Ghent Pig roundworm 2 1
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 2 1
No Yes Homo sapiens 75_37 (old version GRC) Human 57 23
No Yes Homo sapiens (NCBI version) Human 26 10
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 21 5
No Yes Loa loa v3.3 (Request) Eye worm 1 1
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 1 1
No Yes Homo sapiens 69_37 Human 21 5
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 22 6
No Yes Gorilla gorilla 69_3.1 Western gorilla 20 5
No Yes Pongo abelii 69_2 Sumatran orangutan 14 3
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 20 5
No Yes Macaca mulatta 69_1 Rhesus monkey 19 3
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 14 4
No Yes Otolemur garnettii 69_3 Small-eared galago 21 6
No Yes Microcebus murinus 69_1 Gray mouse lemur 20 7
No Yes Rattus norvegicus 69_3.4 Norway rat 21 5
No Yes Mus musculus 69_38 House mouse 21 5
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 20 5
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 20 5
No Yes Cavia porcellus 69_3 Domestic guinea pig 21 5
No Yes Oryctolagus cuniculus 69_2 Rabbit 21 5
No Yes Ochotona princeps 69 American pika 21 6
No Yes Tupaia belangeri 69 Northern tree shrew 14 4
No Yes Sus scrofa 69_10.2 Pig 15 5
No Yes Bos taurus 69_3.1 Cattle 16 4
No Yes Vicugna pacos 69_1 Alpaca 4 3
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 21 5
No Yes Mustela putorius furo 69_1.0 Domestic ferret 21 5
No Yes Ailuropoda melanoleuca 69_1 Giant panda 21 5
No Yes Canis familiaris 69_3.1 Dog 22 6
No Yes Felis catus 69 Domestic cat 15 5
No Yes Equus caballus 69_2 Horse 22 6
No Yes Myotis lucifugus 69_2.0 Little brown bat 21 5
No Yes Pteropus vampyrus 69_1 Large flying fox 18 5
No Yes Sorex araneus 69_1 European shrew 9 2
No Yes Erinaceus europaeus 69 Western European hedgehog 14 6
No Yes Procavia capensis 69_1 Cape rock hyrax 18 5
No Yes Loxodonta africana 69_3 African savanna elephant 20 5
No Yes Echinops telfairi 69 Small Madagascar hedgehog 12 4
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 17 5
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 11 4
No Yes Macropus eugenii 69_1.0 Tammar wallaby 15 4
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 19 5
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 21 5
No Yes Ornithorhynchus anatinus 69_5 Platypus 21 5
No Yes Petromyzon marinus 69_7.0 Sea lamprey 9 4
No Yes Meleagris gallopavo 69_2 Turkey 19 6
No Yes Gallus gallus 69_2 Chicken 21 5
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 23 6
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 21 5
No Yes Anolis carolinensis 69_2.0 Green anole 20 5
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 20 5
No Yes Latimeria chalumnae 69_1 Coelacanth 18 5
No Yes Gadus morhua 69_1 Atlantic cod 28 9
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 33 9
No Yes Takifugu rubripes 69_4 Torafugu 32 9
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 35 10
No Yes Oryzias latipes 69_1 Japanese medaka 30 7
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 29 8
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 32 9
No Yes Danio rerio 69_9 Zebrafish 33 9
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 6 3
No Yes Ciona intestinalis 69 Vase tunicate 6 3
No Yes Drosophila melanogaster 69_5 Fruit fly 5 2
No Yes Caenorhabditis elegans 69_215 Roundworm 2 1
No Yes NCBI 2017_08 genome   23527 5520
No Yes STRING v9.0.5 (STRING)   674 204
No Yes Uniprot 2018_03 genome   6386 2226
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   7 5
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   7 7
No Yes TargetDB (Targets)   6 4

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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