SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


CCHHC domain superfamily domain assignments
in
Brugia malayi WS250

Assignment details

(show help)


Brugia malayi WS250 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Bm4268   0.000000000000641   234-265   CCHHC domain  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a CCHHC domain domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   35807 35807
No Yes Homo sapiens 76_38 Human 83 26
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 22 6
No Yes Gorilla gorilla 76_3.1 Western gorilla 34 8
No Yes Pongo abelii 76_2 Sumatran orangutan 22 5
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 21 6
No Yes Papio anubis 76 Olive baboon 21 5
No Yes Macaca mulatta 76_1 Rhesus monkey 27 6
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 39 11
No Yes Otolemur garnettii 76_3 Small-eared galago 21 6
No Yes Microcebus murinus 76_1 Gray mouse lemur 20 7
No Yes Rattus norvegicus 76_5.0 Norway rat 27 7
No Yes Mus musculus 76_38 House mouse 87 20
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 20 5
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 20 5
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 15 4
No Yes Cavia porcellus 76_3 Domestic guinea pig 21 5
No Yes Oryctolagus cuniculus 76_2 Rabbit 26 6
No Yes Ochotona princeps 76 American pika 21 6
No Yes Tupaia belangeri 76 Northern tree shrew 14 4
No Yes Sus scrofa 76_10.2 Pig 15 5
No Yes Bos taurus 76_3.1 Cattle 17 5
No Yes Ovis aries 76_3.1 Sheep 20 6
No Yes Vicugna pacos 76_1 Alpaca 4 3
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 21 5
No Yes Mustela putorius furo 76_1.0 Domestic ferret 21 5
No Yes Ailuropoda melanoleuca 76_1 Giant panda 27 7
No Yes Canis familiaris 76_3.1 Dog 36 9
No Yes Felis catus 76_6.2 Domestic cat 20 4
No Yes Equus caballus 76_2 Horse 22 6
No Yes Myotis lucifugus 76_2.0 Little brown bat 21 5
No Yes Pteropus vampyrus 76_1 Large flying fox 18 5
No Yes Sorex araneus 76_1 European shrew 9 2
No Yes Erinaceus europaeus 76 Western European hedgehog 14 6
No Yes Procavia capensis 76_1 Cape rock hyrax 18 5
No Yes Loxodonta africana 76_3 African savanna elephant 33 8
No Yes Echinops telfairi 76 Small Madagascar hedgehog 12 4
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 24 5
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 11 4
No Yes Macropus eugenii 76_1.0 Tammar wallaby 15 4
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 26 7
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 21 5
No Yes Ornithorhynchus anatinus 76_5 Platypus 21 5
No Yes Saccoglossus kowalevskii v3.0   78 31
No Yes Petromyzon marinus 76_7.0 Sea lamprey 12 5
No Yes Meleagris gallopavo 76_2 Turkey 20 7
No Yes Gallus gallus 76_4 Chicken 22 5
No Yes Anas platyrhynchos 76_1.0 Mallard 22 6
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 23 6
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 20 5
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 23 7
No Yes Anolis carolinensis 76_2.0 Green anole 26 6
No Yes Xenopus laevis African clawed frog 35 10
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 21 6
No Yes Latimeria chalumnae 76_1 Coelacanth 22 7
No Yes Lepisosteus oculatus 76 Spotted gar 52 11
No Yes Gadus morhua 76_1 Atlantic cod 28 9
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 43 11
No Yes Takifugu rubripes 76_4 Torafugu 147 42
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 35 10
No Yes Oryzias latipes 76_1 Japanese medaka 36 9
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 29 8
No Yes Poecilia formosa 76 Amazon molly 33 9
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 62 16
No Yes Astyanax mexicanus 76 Mexican tetra 37 8
No Yes Danio rerio 76_9 Zebrafish 59 19
No Yes Oikopleura dioica   5 3
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 6 3
No Yes Ciona intestinalis 76 Vase tunicate 6 3
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 11 4
No Yes Octopus bimaculoides 280   8 6
No Yes Crassostrea gigas 22 Pacific oyster 8 5
No Yes Lottia gigantea Owl limpet 8 2
No Yes Helobdella robusta   4 3
No Yes Capitella sp. I   10 5
No Yes Danaus plexippus OGS1.0 Monarch butterfly 4 2
No Yes Heliconius melpomene Postman butterfly 6 2
No Yes Bombyx mori Domestic silkworm 3 2
No Yes Nasonia vitripennis Jewel wasp 6 2
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 12 7
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 6 2
No Yes Linepithema humile v1.1 Argentine ant 6 2
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 6 6
No Yes Solenopsis invicta v.2.2.3 Red fire ant 6 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 6 2
No Yes Atta cephalotes v1.1   4 3
No Yes Camponotus floridanus v3.3 Florida carpenter ant 7 2
No Yes Lucilia cuprina Australian sheep blowfly 6 3
No Yes Drosophila grimshawi 1.3   4 2
No Yes Drosophila willistoni 1.3   4 2
No Yes Drosophila pseudoobscura 2.13   4 2
No Yes Drosophila persimilis 1.3   4 3
No Yes Drosophila suzukii   4 2
No Yes Drosophila yakuba 1.3   4 2
No Yes Drosophila simulans 1.3   2 2
No Yes Drosophila sechellia 1.3   4 2
No Yes Drosophila melanogaster 76_5 Fruit fly 17 8
No Yes Drosophila erecta 1.3   1 1
No Yes Drosophila ananassae 1.3   4 2
No Yes Drosophila virilis 1.2   4 2
No Yes Drosophila mojavensis 1.3   3 2
No Yes Megaselia scalaris 22   4 3
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 8 3
No Yes Culex pipiens quinquefasciatus Southern house mosquito 5 2
No Yes Anopheles darlingi 22 American malaria mosquito 1 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 7 3
No Yes Tribolium castaneum 3.0 Red flour beetle 7 4
No Yes Pediculus humanus corporis (Early assembly) Human body louse 9 3
No Yes Acyrthosiphon pisum Pea aphid 2 2
No Yes Rhodnius prolixus 22   2 2
No Yes Daphnia pulex Common water flea 5 3
No Yes Strigamia maritima 22   9 4
No Yes Sarcoptes scabiei   3 2
No Yes Tetranychus urticae Two-spotted spider mite 6 3
No Yes Ixodes scapularis (Preliminary) Black-legged tick 4 2
No Yes Meloidogyne incognita Southern root-knot nematode 2 1
No Yes Onchocerca volvulus 22   2 1
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 1 1
No Yes Caenorhabditis japonica   2 1
No Yes Caenorhabditis brenneri   5 3
No Yes Caenorhabditis remanei   3 2
No Yes Caenorhabditis elegans 76_235 Roundworm 4 2
No Yes Caenorhabditis briggsae 2   2 1
No Yes Trichinella spiralis 22   3 1
No Yes Hymenolepis microstoma   3 2
No Yes Echinococcus multilocularis   3 2
No Yes Echinococcus granulosus   3 2
No Yes Taenia solium Pork tapeworm 2 2
No Yes Schistosoma mansoni   3 2
No Yes Acropora digitifera v1.0   5 4
No Yes Nematostella vectensis 1.0 Starlet sea anemone 6 3
No Yes Hydra vulgaris   2 2
No Yes Amphimedon queenslandica   2 1
No Yes Monosiga brevicollis   1 1
No Yes Sphaeroforma arctica JP610   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 23 8
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 4 2
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 8 3
No Yes Ascaris suum Victoria/Ghent Pig roundworm 2 1
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 2 1
No Yes Homo sapiens 75_37 (old version GRC) Human 57 23
No Yes Homo sapiens (NCBI version) Human 26 10
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 21 5
No Yes Loa loa v3.3 (Request) Eye worm 1 1
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 1 1
No Yes Homo sapiens 69_37 Human 21 5
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 22 6
No Yes Gorilla gorilla 69_3.1 Western gorilla 20 5
No Yes Pongo abelii 69_2 Sumatran orangutan 14 3
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 20 5
No Yes Macaca mulatta 69_1 Rhesus monkey 19 3
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 14 4
No Yes Otolemur garnettii 69_3 Small-eared galago 21 6
No Yes Microcebus murinus 69_1 Gray mouse lemur 20 7
No Yes Rattus norvegicus 69_3.4 Norway rat 21 5
No Yes Mus musculus 69_38 House mouse 21 5
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 20 5
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 20 5
No Yes Cavia porcellus 69_3 Domestic guinea pig 21 5
No Yes Oryctolagus cuniculus 69_2 Rabbit 21 5
No Yes Ochotona princeps 69 American pika 21 6
No Yes Tupaia belangeri 69 Northern tree shrew 14 4
No Yes Sus scrofa 69_10.2 Pig 15 5
No Yes Bos taurus 69_3.1 Cattle 16 4
No Yes Vicugna pacos 69_1 Alpaca 4 3
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 21 5
No Yes Mustela putorius furo 69_1.0 Domestic ferret 21 5
No Yes Ailuropoda melanoleuca 69_1 Giant panda 21 5
No Yes Canis familiaris 69_3.1 Dog 22 6
No Yes Felis catus 69 Domestic cat 15 5
No Yes Equus caballus 69_2 Horse 22 6
No Yes Myotis lucifugus 69_2.0 Little brown bat 21 5
No Yes Pteropus vampyrus 69_1 Large flying fox 18 5
No Yes Sorex araneus 69_1 European shrew 9 2
No Yes Erinaceus europaeus 69 Western European hedgehog 14 6
No Yes Procavia capensis 69_1 Cape rock hyrax 18 5
No Yes Loxodonta africana 69_3 African savanna elephant 20 5
No Yes Echinops telfairi 69 Small Madagascar hedgehog 12 4
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 17 5
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 11 4
No Yes Macropus eugenii 69_1.0 Tammar wallaby 15 4
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 19 5
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 21 5
No Yes Ornithorhynchus anatinus 69_5 Platypus 21 5
No Yes Petromyzon marinus 69_7.0 Sea lamprey 9 4
No Yes Meleagris gallopavo 69_2 Turkey 19 6
No Yes Gallus gallus 69_2 Chicken 21 5
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 23 6
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 21 5
No Yes Anolis carolinensis 69_2.0 Green anole 20 5
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 20 5
No Yes Latimeria chalumnae 69_1 Coelacanth 18 5
No Yes Gadus morhua 69_1 Atlantic cod 28 9
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 33 9
No Yes Takifugu rubripes 69_4 Torafugu 32 9
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 35 10
No Yes Oryzias latipes 69_1 Japanese medaka 30 7
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 29 8
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 32 9
No Yes Danio rerio 69_9 Zebrafish 33 9
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 6 3
No Yes Ciona intestinalis 69 Vase tunicate 6 3
No Yes Drosophila melanogaster 69_5 Fruit fly 5 2
No Yes Caenorhabditis elegans 69_215 Roundworm 2 1
No Yes NCBI 2017_08 genome   23527 5520
No Yes STRING v9.0.5 (STRING)   674 204
No Yes Uniprot 2018_03 genome   6386 2226
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   7 5
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   7 7
No Yes TargetDB (Targets)   6 4

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]