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  Home > Genomes > DEK C-terminal domain domains in all genomes


DEK C-terminal domain superfamily domain assignments
in
all genomes

Assignment details

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25 selected genomes have 95 significant domains in 95 proteins.

Showing genomes 1 to 25 of 501
  1 2 3 4 5 6 7 8 9 10 11   Next Last

Homo sapiens 76_38 has 13 significant domains in 13 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSP00000244776   3.01e-22   275-341   DEK C-terminal domain  
ENSP00000312081   0.0000497   273-319   DEK C-terminal domain  
ENSP00000315713   0.00000549   250-298   DEK C-terminal domain  
ENSP00000326107   0.00000327   261-309   DEK C-terminal domain  
ENSP00000365948   0.0000353   127-173   DEK C-terminal domain  
ENSP00000380414   3.53e-22   309-375   DEK C-terminal domain  
ENSP00000421165   3.14e-22   281-347   DEK C-terminal domain  
ENSP00000423427   4.45e-22   85-149   DEK C-terminal domain  
ENSP00000431788   0.0000314   273-319   DEK C-terminal domain  
ENSP00000433902   0.00000929   37-83   DEK C-terminal domain  
ENSP00000447629   0.0000000706   25-75   DEK C-terminal domain  
ENSP00000448824   0.00000327   250-298   DEK C-terminal domain  
ENSP00000480198   0.0000157   186-233   DEK C-terminal domain  
 
Weak hits:
ENSP00000269033   0.000602   250-297   DEK C-terminal domain  
ENSP00000396927   0.0745   7-40   DEK C-terminal domain  
ENSP00000444743   0.000615   277-324   DEK C-terminal domain  

Pan troglodytes 76_2.1.4 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPTRP00000030325   3.53e-22   308-374   DEK C-terminal domain  
ENSPTRP00000045966   0.0000183   271-318   DEK C-terminal domain  
 
Weak hits:
ENSPTRP00000015290   0.000589   229-276   DEK C-terminal domain  

Gorilla gorilla 76_3.1 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSGGOP00000000965   0.00000902   227-275   DEK C-terminal domain  
ENSGGOP00000011041   0.0000183   272-319   DEK C-terminal domain  
ENSGGOP00000012535   3.53e-22   309-375   DEK C-terminal domain  
 
Weak hits:
ENSGGOP00000000575   0.000589   230-277   DEK C-terminal domain  

Pongo abelii 76_2 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPPYP00000003475   0.0000183   251-297   DEK C-terminal domain  
ENSPPYP00000018189   3.53e-22   308-374   DEK C-terminal domain  
 
Weak hits:
ENSPPYP00000009138   0.000562   250-297   DEK C-terminal domain  

Nomascus leucogenys 76_1.0 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSNLEP00000002024   3.27e-22   292-358   DEK C-terminal domain  
ENSNLEP00000008287   0.00000902   227-275   DEK C-terminal domain  
 
Weak hits:
ENSNLEP00000004311   0.000615   277-324   DEK C-terminal domain  
ENSNLEP00000004313   0.000602   257-304   DEK C-terminal domain  
ENSNLEP00000007686   0.000549   270-309   DEK C-terminal domain  

Papio anubis 76 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPANP00000001289   0.00000929   250-298   DEK C-terminal domain  
ENSPANP00000010332   0.0000157   272-319   DEK C-terminal domain  
ENSPANP00000013722   2.88e-22   269-335   DEK C-terminal domain  
ENSPANP00000016067   0.000000000000484   246-305   DEK C-terminal domain  
ENSPANP00000017121   2.88e-22   269-335   DEK C-terminal domain  
 
Weak hits:
ENSPANP00000019934   0.000615   277-324   DEK C-terminal domain  

Macaca mulatta 76_1 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMMUP00000019799   0.00000889   214-262   DEK C-terminal domain  
ENSMMUP00000019800   0.00000562   261-309   DEK C-terminal domain  
ENSMMUP00000020963   0.0000157   272-319   DEK C-terminal domain  
ENSMMUP00000025537   0.00000000405   1-30   DEK C-terminal domain  
ENSMMUP00000025990   1.06e-22   130-196   DEK C-terminal domain  
 
Weak hits:
ENSMMUP00000018936   0.000562   171-218   DEK C-terminal domain  

Callithrix jacchus 76_3.2.1 has 10 significant domains in 10 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCJAP00000001640   0.0000051   272-319   DEK C-terminal domain  
ENSCJAP00000001641   0.00000484   272-319   DEK C-terminal domain  
ENSCJAP00000012887   2.75e-22   217-283   DEK C-terminal domain  
ENSCJAP00000012889   4.45e-22   310-376   DEK C-terminal domain  
ENSCJAP00000028499   0.00000562   261-309   DEK C-terminal domain  
ENSCJAP00000028506   0.00000889   215-263   DEK C-terminal domain  
ENSCJAP00000028507   0.00000889   217-265   DEK C-terminal domain  
ENSCJAP00000028508   0.00000929   250-298   DEK C-terminal domain  
ENSCJAP00000042013   3.79e-22   276-342   DEK C-terminal domain  
ENSCJAP00000044037   1.31e-22   131-197   DEK C-terminal domain  
 
Weak hits:
ENSCJAP00000025163   0.00068   223-270   DEK C-terminal domain  

Otolemur garnettii 76_3 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOGAP00000006937   5.62e-22   301-367   DEK C-terminal domain  
ENSOGAP00000009529   0.00000471   269-316   DEK C-terminal domain  
ENSOGAP00000012580   0.00000929   250-298   DEK C-terminal domain  
 
Weak hits:
ENSOGAP00000000721   0.000602   277-324   DEK C-terminal domain  

Microcebus murinus 76_1 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMICP00000000250   0.00000889   227-275   DEK C-terminal domain  
ENSMICP00000003723   0.00000131   269-316   DEK C-terminal domain  
ENSMICP00000014092   3.4e-22   206-272   DEK C-terminal domain  
 
Weak hits:
ENSMICP00000003778   0.0589   69-113   DEK C-terminal domain  
ENSMICP00000004971   0.000589   248-295   DEK C-terminal domain  

Rattus norvegicus 76_5.0 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSRNOP00000000883   0.0000085   192-240   DEK C-terminal domain  
ENSRNOP00000021751   5.36e-22   312-378   DEK C-terminal domain  
ENSRNOP00000025546   0.0000301   269-315   DEK C-terminal domain  
ENSRNOP00000039607   0.00000876   214-262   DEK C-terminal domain  
 
Weak hits:
ENSRNOP00000019410   0.000602   257-304   DEK C-terminal domain  
ENSRNOP00000035285   0.0706   510-545   DEK C-terminal domain  
ENSRNOP00000066105   0.0706   510-545   DEK C-terminal domain  

Mus musculus 76_38 has 6 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000021807   5.36e-22   314-380   DEK C-terminal domain  
ENSMUSP00000047718   0.0000107   270-316   DEK C-terminal domain  
ENSMUSP00000076873   0.00000876   207-255   DEK C-terminal domain  
ENSMUSP00000107917   0.00000889   228-276   DEK C-terminal domain  
ENSMUSP00000109483   0.00000994   273-320   DEK C-terminal domain  
ENSMUSP00000124312   0.00000915   250-298   DEK C-terminal domain  
 
Weak hits:
ENSMUSP00000023457   0.0654   509-544   DEK C-terminal domain  
ENSMUSP00000042625   0.000602   250-297   DEK C-terminal domain  
ENSMUSP00000115257   0.0497   482-517   DEK C-terminal domain  
ENSMUSP00000117481   0.00942   90-125   DEK C-terminal domain  
ENSMUSP00000137933   0.000602   256-303   DEK C-terminal domain  

Dipodomys ordii 76_1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSDORP00000000822   0.00000915   179-226   DEK C-terminal domain  
ENSDORP00000004315   9.29e-21   260-325   DEK C-terminal domain  
 
Weak hits:
ENSDORP00000013582   0.000772   250-297   DEK C-terminal domain  

Ictidomys tridecemlineatus 76_2 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSTOP00000010405   0.00000876   227-275   DEK C-terminal domain  
ENSSTOP00000014051   0.0000017   272-319   DEK C-terminal domain  

Heterocephalus glaber v1.7-2 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
HGL_H00000312081   0.00000641   268-315   DEK C-terminal domain  
HGL_H00000315713   0.00000929   250-298   DEK C-terminal domain  
HGL_H00000380414   0.0000000000353   280-321   DEK C-terminal domain  
HGL_N10000571   2.75e-17   136-194   DEK C-terminal domain  
 
Weak hits:
HGL_H00000269033   0.000575   224-271   DEK C-terminal domain  
HGL_H00000327197   0.0471   511-545   DEK C-terminal domain  

Cavia porcellus 76_3 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCPOP00000004773   5.62e-22   310-376   DEK C-terminal domain  
ENSCPOP00000007336   0.00000641   250-298   DEK C-terminal domain  
ENSCPOP00000007742   0.00000288   271-318   DEK C-terminal domain  
 
Weak hits:
ENSCPOP00000002693   0.0432   509-543   DEK C-terminal domain  
ENSCPOP00000005164   0.000589   250-297   DEK C-terminal domain  

Oryctolagus cuniculus 76_2 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOCUP00000005527   0.00000157   229-276   DEK C-terminal domain  
ENSOCUP00000011559   0.00000863   227-275   DEK C-terminal domain  
ENSOCUP00000019290   5.62e-22   309-375   DEK C-terminal domain  
 
Weak hits:
ENSOCUP00000015928   0.000602   277-324   DEK C-terminal domain  

Ochotona princeps 76 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOPRP00000006108   9.68e-22   330-396   DEK C-terminal domain  
ENSOPRP00000012501   0.000000772   263-310   DEK C-terminal domain  
ENSOPRP00000014523   0.0000183   243-289   DEK C-terminal domain  
 
Weak hits:
ENSOPRP00000007160   0.000589   250-297   DEK C-terminal domain  

Tupaia belangeri 76 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTBEP00000003472   0.0000157   270-317   DEK C-terminal domain  
ENSTBEP00000007760   9.68e-22   309-375   DEK C-terminal domain  

Sus scrofa 76_10.2 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSSCP00000001145   0.0000000000000157   318-368   DEK C-terminal domain  
ENSSSCP00000010610   0.00000929   253-301   DEK C-terminal domain  
ENSSSCP00000025655   0.00000471   270-317   DEK C-terminal domain  

Bos taurus 76_3.1 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSBTAP00000017097   9.02e-22   309-375   DEK C-terminal domain  
ENSBTAP00000018426   0.00000327   270-317   DEK C-terminal domain  
ENSBTAP00000025062   0.00000811   229-277   DEK C-terminal domain  

Ovis aries 76_3.1 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOARP00000011049   8.63e-22   301-367   DEK C-terminal domain  
ENSOARP00000011051   6.54e-22   243-309   DEK C-terminal domain  
ENSOARP00000011563   0.00000353   270-317   DEK C-terminal domain  
ENSOARP00000019012   0.00000785   232-280   DEK C-terminal domain  
 
Weak hits:
ENSOARP00000009452   0.000615   225-272   DEK C-terminal domain  

Vicugna pacos 76_1 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSVPAP00000001918   7.06e-22   260-326   DEK C-terminal domain  
ENSVPAP00000009911   0.00000128   269-316   DEK C-terminal domain  
ENSVPAP00000010877   0.00000471   228-275   DEK C-terminal domain  
 
Weak hits:
ENSVPAP00000009500   0.000575   228-275   DEK C-terminal domain  

Tursiops truncatus 76_1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTTRP00000003826   0.00000798   226-274   DEK C-terminal domain  
ENSTTRP00000006762   1.09e-21   357-423   DEK C-terminal domain  
 
Weak hits:
ENSTTRP00000001763   0.00111   269-314   DEK C-terminal domain  

Mustela putorius furo 76_1.0 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMPUP00000003398   0.0000144   207-255   DEK C-terminal domain  
ENSMPUP00000003692   0.00000144   270-317   DEK C-terminal domain  
ENSMPUP00000004992   5.23e-22   303-369   DEK C-terminal domain  
 
Weak hits:
ENSMPUP00000013786   0.000641   250-297   DEK C-terminal domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   10638 10638
No Yes Homo sapiens 76_38 Human 13 13
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 2 2
No Yes Gorilla gorilla 76_3.1 Western gorilla 3 3
No Yes Pongo abelii 76_2 Sumatran orangutan 2 2
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 2 2
No Yes Papio anubis 76 Olive baboon 5 5
No Yes Macaca mulatta 76_1 Rhesus monkey 5 5
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 10 10
No Yes Otolemur garnettii 76_3 Small-eared galago 3 3
No Yes Microcebus murinus 76_1 Gray mouse lemur 3 3
No Yes Rattus norvegicus 76_5.0 Norway rat 4 4
No Yes Mus musculus 76_38 House mouse 6 6
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 2 2
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 2 2
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 4 4
No Yes Cavia porcellus 76_3 Domestic guinea pig 3 3
No Yes Oryctolagus cuniculus 76_2 Rabbit 3 3
No Yes Ochotona princeps 76 American pika 3 3
No Yes Tupaia belangeri 76 Northern tree shrew 2 2
No Yes Sus scrofa 76_10.2 Pig 3 3
No Yes Bos taurus 76_3.1 Cattle 3 3
No Yes Ovis aries 76_3.1 Sheep 4 4
No Yes Vicugna pacos 76_1 Alpaca 3 3
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 2 2
No Yes Mustela putorius furo 76_1.0 Domestic ferret 3 3
No Yes Ailuropoda melanoleuca 76_1 Giant panda 3 3
No Yes Canis familiaris 76_3.1 Dog 3 3
No Yes Felis catus 76_6.2 Domestic cat 4 4
No Yes Equus caballus 76_2 Horse 3 3
No Yes Myotis lucifugus 76_2.0 Little brown bat 2 2
No Yes Pteropus vampyrus 76_1 Large flying fox 3 3
No Yes Sorex araneus 76_1 European shrew 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 2 2
No Yes Procavia capensis 76_1 Cape rock hyrax 3 3
No Yes Loxodonta africana 76_3 African savanna elephant 5 5
No Yes Echinops telfairi 76 Small Madagascar hedgehog 1 1
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 5 5
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 1 1
No Yes Macropus eugenii 76_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 4 4
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 4 4
No Yes Ornithorhynchus anatinus 76_5 Platypus 4 4
No Yes Saccoglossus kowalevskii v3.0   6 6
No Yes Petromyzon marinus 76_7.0 Sea lamprey 3 3
No Yes Meleagris gallopavo 76_2 Turkey 4 4
No Yes Gallus gallus 76_4 Chicken 2 2
No Yes Anas platyrhynchos 76_1.0 Mallard 2 2
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 2 2
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 4 4
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 3 3
No Yes Anolis carolinensis 76_2.0 Green anole 3 3
No Yes Xenopus laevis African clawed frog 8 8
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 4 4
No Yes Latimeria chalumnae 76_1 Coelacanth 5 5
No Yes Lepisosteus oculatus 76 Spotted gar 3 3
No Yes Gadus morhua 76_1 Atlantic cod 1 1
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 4 4
No Yes Takifugu rubripes 76_4 Torafugu 5 5
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 3 3
No Yes Oryzias latipes 76_1 Japanese medaka 2 2
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 3 3
No Yes Poecilia formosa 76 Amazon molly 5 5
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 5 5
No Yes Astyanax mexicanus 76 Mexican tetra 3 3
No Yes Danio rerio 76_9 Zebrafish 6 6
No Yes Oikopleura dioica   2 2
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1 1
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Adineta vaga   7 7
No Yes Octopus bimaculoides 280   2 2
No Yes Crassostrea gigas 22 Pacific oyster 3 3
No Yes Lottia gigantea Owl limpet 2 2
No Yes Helobdella robusta   1 1
No Yes Capitella sp. I   2 2
No Yes Danaus plexippus OGS1.0 Monarch butterfly 4 3
No Yes Heliconius melpomene Postman butterfly 2 2
No Yes Bombyx mori Domestic silkworm 2 2
No Yes Nasonia vitripennis Jewel wasp 2 2
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 3 3
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 2 2
No Yes Linepithema humile v1.1 Argentine ant 2 2
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 2 2
No Yes Solenopsis invicta v.2.2.3 Red fire ant 2 2
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 2 2
No Yes Atta cephalotes v1.1   2 2
No Yes Camponotus floridanus v3.3 Florida carpenter ant 2 2
No Yes Lucilia cuprina Australian sheep blowfly 3 3
No Yes Drosophila grimshawi 1.3   3 3
No Yes Drosophila willistoni 1.3   3 3
No Yes Drosophila pseudoobscura 2.13   3 3
No Yes Drosophila persimilis 1.3   3 3
No Yes Drosophila suzukii   2 2
No Yes Drosophila yakuba 1.3   3 3
No Yes Drosophila simulans 1.3   3 3
No Yes Drosophila sechellia 1.3   3 3
No Yes Drosophila melanogaster 76_5 Fruit fly 9 9
No Yes Drosophila erecta 1.3   3 3
No Yes Drosophila ananassae 1.3   3 3
No Yes Drosophila virilis 1.2   3 3
No Yes Drosophila mojavensis 1.3   3 3
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 2 2
No Yes Culex pipiens quinquefasciatus Southern house mosquito 4 4
No Yes Anopheles darlingi 22 American malaria mosquito 3 3
No Yes Anopheles gambiae 49_3j African malaria mosquito 3 3
No Yes Tribolium castaneum 3.0 Red flour beetle 3 3
No Yes Pediculus humanus corporis (Early assembly) Human body louse 3 3
No Yes Acyrthosiphon pisum Pea aphid 2 2
No Yes Rhodnius prolixus 22   2 2
No Yes Daphnia pulex Common water flea 3 3
No Yes Strigamia maritima 22   2 2
No Yes Sarcoptes scabiei   1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 2 2
No Yes Pristionchus pacificus   2 2
No Yes Meloidogyne incognita Southern root-knot nematode 2 2
No Yes Onchocerca volvulus 22   3 3
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 3 3
No Yes Trichinella spiralis 22   3 3
No Yes Hymenolepis microstoma   2 2
No Yes Echinococcus multilocularis   2 2
No Yes Echinococcus granulosus   2 2
No Yes Taenia solium Pork tapeworm 2 2
No Yes Schistosoma mansoni   3 3
No Yes Mnemiopsis leidyi Sea walnut 4 4
No Yes Nematostella vectensis 1.0 Starlet sea anemone 3 3
No Yes Hydra vulgaris   1 1
No Yes Trichoplax adhaerens   2 2
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   2 2
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   1 1
No Yes Conidiobolus coronatus NRRL28638 v1.0   9 9
No Yes Mortierella verticillata NRRL 6337   3 3
No Yes Phycomyces blakesleeanus   5 5
No Yes Rhizopus oryzae RA 99-880   5 5
No Yes Mucor circinelloides   4 4
No Yes Rhizomucor miehei CAU432   4 4
No Yes Malassezia globosa CBS 7966   6 6
No Yes Sporisorium reilianum 22   4 4
No Yes Ustilago maydis   2 2
No Yes Mixia osmundae IAM 14324 v1.0   2 2
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   2 2
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   3 3
No Yes Melampsora laricis-populina   2 2
No Yes Rhodotorula graminis WP1 v1.0   3 3
No Yes Sporobolomyces roseus IAM 13481   1 1
No Yes Microbotryum violaceum 22   4 4
No Yes Wallemia sebi v1.0   2 2
No Yes Sphaerobolus stellatus v1.0   2 2
No Yes Piloderma croceum F 1598 v1.0   1 1
No Yes Serpula lacrymans var. lacrymans S7.9   3 3
No Yes Coniophora puteana   3 3
No Yes Hydnomerulius pinastri v2.0   3 3
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   3 3
No Yes Pisolithus microcarpus 441 v1.0   4 4
No Yes Pisolithus tinctorius Marx 270 v1.0   3 3
No Yes Scleroderma citrinum Foug A v1.0   6 6
No Yes Coprinopsis cinerea okayama7 130 v3   2 2
No Yes Pleurotus ostreatus Oyster mushroom 2 2
No Yes Amanita thiersii Skay4041 v1.0   2 2
No Yes Amanita muscaria Koide v1.0 Fly agaric 2 2
No Yes Galerina marginata v1.0   2 2
No Yes Hebeloma cylindrosporum h7 v2.0   2 2
No Yes Laccaria bicolor S238N-H82   3 3
No Yes Agaricus bisporus var. bisporus   2 2
No Yes Schizophyllum commune   2 2
No Yes Stereum hirsutum FP-91666 SS1 v1.0   2 2
No Yes Heterobasidion annosum   2 2
No Yes Gloeophyllum trabeumv1.0   3 3
No Yes Punctularia strigosozonata v1.0   2 2
No Yes Sebacina vermifera MAFF 305830 v1.0   2 2
No Yes Fomitiporia mediterranea v1.0   2 2
No Yes Tulasnella calospora AL13/4D v1.0   2 2
No Yes Postia placenta   3 3
No Yes Wolfiporia cocos MD-104 SS10 v1.0   2 2
No Yes Fomitopsis pinicolav1.0   2 2
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   2 2
No Yes Phanerochaete chrysosporium RP-78 2.1   1 1
No Yes Dichomitus squalens   2 2
No Yes Trametes versicolor v1.0   2 2
No Yes Tremella mesenterica Witches' butter 2 2
No Yes Daldinia eschscholzii EC12 v1.0   3 3
No Yes Apiospora montagnei NRRL 25634 v1.0   3 3
No Yes Magnaporthe poae ATCC 64411 22   2 2
No Yes Magnaporthe grisea 70-15   3 3
No Yes Podospora anserina   3 3
No Yes Sporotrichum thermophile ATCC 42464   3 3
No Yes Thielavia terrestris NRRL 8126   3 3
No Yes Chaetomium globosum CBS 148.51   2 2
No Yes Neurospora tetrasperma   3 3
No Yes Neurospora discreta FGSC 8579   3 3
No Yes Neurospora crassa OR74A   3 3
No Yes Cryphonectria parasitica Chestnut blight fungus 3 3
No Yes Verticillium albo-atrum VaMs.102   2 2
No Yes Verticillium dahliae VdLs.17   3 3
No Yes Acremonium alcalophilumv 1.0   3 3
No Yes Glomerella graminicola 22   3 3
No Yes Fusarium graminearum   2 2
No Yes Nectria haematococca mpVI   3 3
No Yes Fusarium oxysporum f. sp. lycopersici 4286   3 3
No Yes Fusarium verticillioides 7600   3 3
No Yes Trichoderma asperellum CBS 433.97 v1.0   3 3
No Yes Trichoderma atroviride   2 2
No Yes Trichoderma citrinoviride v1.0   3 3
No Yes Trichoderma reesei 1.2   2 2
No Yes Trichoderma virens Gv29-8   3 3
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   3 3
No Yes Trichoderma harzianum CBS 226.95 v1.0   3 3
No Yes Amorphotheca resinae v1.0 Creosote fungus 3 3
No Yes Botrytis cinerea B05.10   2 2
No Yes Sclerotinia sclerotiorum   2 2
No Yes Blumeria graminis 22   2 2
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Leptosphaeria maculans 22   3 3
No Yes Setosphaeria turcica v1.0   3 3
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   3 3
No Yes Cochliobolus victoriae FI3 v1.0   3 3
No Yes Cochliobolus carbonum 26-R-13 v1.0   3 3
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 3 3
No Yes Alternaria brassicicola   1 1
No Yes Cochliobolus lunatus m118 v2.0   3 3
No Yes Pyrenophora teres f. teres 22   2 2
No Yes Pyrenophora tritici-repentis   3 3
No Yes Stagonospora nodorum   2 2
No Yes Mycosphaerella graminicola IPO323   2 2
No Yes Zasmidium cellare ATCC 36951 v1.0   3 3
No Yes Dothistroma septosporum   2 2
No Yes Septoria musiva v1.0   2 2
No Yes Mycosphaerella fijiensis CIRAD86   3 3
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   2 2
No Yes Paracoccidioides brasiliensis Pb18   3 3
No Yes Coccidioides posadasii RMSCC 3488   2 2
No Yes Coccidioides immitis RS   3 3
No Yes Ajellomyces dermatitidis SLH14081   3 3
No Yes Histoplasma capsulatum class NAmI strain WU24   3 3
No Yes Microsporum canis CBS 113480   3 3
No Yes Trichophyton equinum CBS 127.97   3 3
No Yes Trichophyton verrucosum HKI 0517   2 2
No Yes Arthroderma benhamiae CBS 112371   2 2
No Yes Trichophyton tonsurans CBS 112818   2 2
No Yes Trichophyton rubrum CBS 118892   2 2
No Yes Uncinocarpus reesii 1704   3 3
No Yes Aspergillus zonatus v1.0   2 2
No Yes Penicillium chrysogenum Wisconsin 54-1255   2 2
No Yes Penicillium chrysogenum v1.0   3 3
No Yes Aspergillus acidus v1.0   3 3
No Yes Aspergillus fumigatus Af293   3 3
No Yes Aspergillus brasiliensis v1.0   3 3
No Yes Aspergillus nidulans FGSC A4   3 3
No Yes Aspergillus sydowii v1.0   3 3
No Yes Aspergillus versicolor v1.0   3 3
No Yes Aspergillus glaucus   2 2
No Yes Aspergillus carbonarius ITEM 5010   3 3
No Yes Neosartorya fischeri NRRL 181   3 3
No Yes Aspergillus terreus NIH2624   3 3
No Yes Aspergillus tubingensis v1.0   3 3
No Yes Aspergillus wentii v1.0   3 3
No Yes Aspergillus oryzae RIB40   3 3
No Yes Aspergillus niger 22   2 2
No Yes Aspergillus flavus NRRL3357   3 3
No Yes Aspergillus clavatus NRRL 1   3 3
No Yes Penicillium marneffei ATCC 18224   2 2
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   1 1
No Yes Candida dubliniensis CD36   1 1
No Yes Candida guilliermondii ATCC 6260   1 1
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   1 1
No Yes Debaromyces hansenii   1 1
No Yes Yarrowia lipolytica CLIB122   1 1
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   1 1
No Yes Candida glabrata CBS138   1 1
No Yes Zygosaccharomyces rouxii   1 1
No Yes Saccharomyces mikatae MIT   2 2
No Yes Saccharomyces paradoxus MIT   1 1
No Yes Saccharomyces cerevisiae 76 Baker's yeast 1 1
No Yes Saccharomyces bayanus MIT   1 1
No Yes Schizosaccharomyces cryophilus OY26 22   1 1
No Yes Schizosaccharomyces octosporus yFS286   1 1
No Yes Schizosaccharomyces japonicus yFS275   1 1
No Yes Schizosaccharomyces pombe Fission yeast 1 1
No Yes Catenaria anguillulae PL171 v1.0   6 6
No Yes Allomyces macrogynus ATCC 38327   14 14
No Yes Spizellomyces punctatus DAOM BR117   8 8
No Yes Selaginella moellendorffii   5 5
No Yes Pinus taeda Loblolly pine 2 2
No Yes Picea abies Norway spruce 2 2
No Yes Eucalyptus grandis v201 Rose gum 6 6
No Yes Theobroma cacao B97-61/B2 v1 Cacao 6 6
No Yes Gossypium raimondii v221   26 26
No Yes Citrus clementina v165   10 10
No Yes Citrus sinensis v154 Sweet orange 14 14
No Yes Thellungiella halophila v173   7 7
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 13 13
No Yes Capsella rubella v183   9 9
No Yes Arabidopsis lyrata Lyrate rockcress 8 8
No Yes Arabidopsis thaliana 10 Thale cress 11 11
No Yes Carica papaya Papaya 4 4
No Yes Medicago truncatula Barrel medic 9 9
No Yes Phaseolus vulgaris v186 French bean 10 10
No Yes Glycine max v109 Soybean 18 18
No Yes Cucumis sativus v122 Cucumber 6 6
No Yes Fragaria vesca Wild strawberry 5 5
No Yes Malus domestica v196 Apple 7 7
No Yes Prunus persica v139 Peach 4 4
No Yes Linum usitatissimum v200 Flax 7 7
No Yes Manihot esculenta v147 Cassava 11 11
No Yes Populus trichocarpa v156 Black cottonwood 12 12
No Yes Vitis vinifera Wine grape 4 4
No Yes Mimulus guttatus v140 Spotted monkey flower 6 6
No Yes Solanum lycopersicum v.2.3 Tomato 7 7
No Yes Solanum tuberosum Potato 13 13
No Yes Actinidia chinensis Hongyang   11 11
No Yes Aquilegia coerulea v195   11 11
No Yes Triticum urartu 22   3 3
No Yes Triticum aestivum 22 Bread wheat 8 8
No Yes Aegilops tauschii 22   2 2
No Yes Brachypodium distachyon Stiff brome 7 7
No Yes Oryza barthii 22 African wild rice 4 4
No Yes Oryza meridionalis 22   4 4
No Yes Oryza glumaepatula 22   5 5
No Yes Oryza glaberrima African rice 4 4
No Yes Oryza punctata 22   7 7
No Yes Oryza nivara 22   5 5
No Yes Oryza brachyantha 22 Malo sina 5 5
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 5 5
No Yes Oryza sativa v193 Rice 5 5
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 6 6
No Yes Panicum virgatum v202 Switchgrass 7 7
No Yes Setaria italica v164 Foxtail millet 6 6
No Yes Zea mays subsp. mays Maize 9 9
No Yes Zea mays v181 Maize 11 11
No Yes Sorghum bicolor Sorghum 6 6
No Yes Musa balbisiana Balbis banana 8 8
No Yes Musa acuminata 22 Wild Malaysian banana 7 7
No Yes Amborella trichopoda 22   4 4
No Yes Physcomitrella patens   3 3
No Yes Coccomyxa subellipsoidea sp. C-169 v2   3 3
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Chlorella variabilis sp. NC64A   3 3
No Yes Chlorella vulgaris   4 4
No Yes Volvox carteri f. nagariensis   2 2
No Yes Volvox carteri v199   2 2
No Yes Chlamydomonas reinhardtii 4.0   3 3
No Yes Ostreococcus sp. RCC809   1 1
No Yes Ostreococcus lucimarinus CCE9901   1 1
No Yes Ostreococcus tauri   1 1
No Yes Bathycoccus prasinos   3 3
No Yes Micromonas sp. RCC299   2 2
No Yes Micromonas pusilla CCMP1545 v3.0   5 4
No Yes Cyanidioschyzon merolae strain 10D 22   1 1
No Yes Cyanidioschyzon merolae   1 1
No Yes Bigelowiella natans CCMP2755 22   4 4
No Yes Leishmania major strain Friedlin   1 1
No Yes Leishmania infantum JPCM5 2.4   1 1
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Ectocarpus siliculosus   3 3
No Yes Albugo laibachii 22   2 2
No Yes Pythium iwayamai DAOM BR242034 22   3 3
No Yes Pythium arrhenomanes ATCC 12531 22   2 2
No Yes Pythium ultimum v1.7-2   3 3
No Yes Pythium aphanidermatum DAOM BR444 22   3 3
No Yes Pythium irregulare DAOM BR486 22   3 3
No Yes Pythium vexans DAOM BR484 22   2 2
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 4 4
No Yes Phytophthora sojae 1.1   4 4
No Yes Phytophthora infestans T30-4   4 4
No Yes Phytophthora capsici   3 3
No Yes Hyaloperonospora arabidopsidis 22   3 3
No Yes Phaeodactylum tricornutumCCAP 1055/1   1 1
No Yes Fragilariopsis cylindrus   2 2
No Yes Thalassiosira pseudonana CCMP1335   3 3
No Yes Perkinsus marinus ATCC 50983   2 2
No Yes Cryptosporidium hominis   1 1
No Yes Cryptosporidium parvum Iowa II   1 1
No Yes Theileria parva   1 1
No Yes Theileria annulata   1 1
No Yes Symbiodinium minutum clade B1 v1.2   5 5
No Yes Naegleria gruberi   1 1
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 5 5
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 8 8
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 3 3
No Yes Ascaris suum Victoria/Ghent Pig roundworm 2 2
No Yes Cryptococcus neoformans var. grubii H99   1 1
No Yes Cryptococcus neoformans B-3501A   2 2
No Yes Cryptococcus neoformans JEC21   2 2
No Yes Paracoccidioides brasiliensis Pb01   2 2
No Yes Paracoccidioides brasiliensis Pb03   2 2
No Yes Coccidioides posadasii str. Silveira   2 2
No Yes Coccidioides immitis RMSCC 3703   1 1
No Yes Coccidioides immitis RMSCC 2394   1 1
No Yes Coccidioides immitis H538.4   2 2
No Yes Ajellomyces dermatitidis ER-3   3 3
No Yes Histoplasma capsulatum H143   3 3
No Yes Histoplasma capsulatum H88   3 3
No Yes Histoplasma capsulatum G186AR   3 3
No Yes Aspergillus fumigatus A1163   3 3
No Yes Saccharomyces cerevisiae UC5   1 1
No Yes Saccharomyces cerevisiae PW5   1 1
No Yes Saccharomyces cerevisiae FL100   1 1
No Yes Saccharomyces cerevisiae CLIB382   1 1
No Yes Saccharomyces cerevisiae CLIB324   1 1
No Yes Saccharomyces cerevisiae CBS7960   1 1
No Yes Saccharomyces cerevisiae YJM269   1 1
No Yes Saccharomyces cerevisiae T7   1 1
No Yes Saccharomyces cerevisiae FostersB   1 1
No Yes Saccharomyces cerevisiae FostersO   1 1
No Yes Saccharomyces cerevisiae VL3   1 1
No Yes Saccharomyces cerevisiae Vin13   1 1
No Yes Saccharomyces cerevisiae LalvinQA23   1 1
No Yes Saccharomyces cerevisiae AWRI796   1 1
No Yes Saccharomyces cerevisiae Sigma1278b   1 1
No Yes Saccharomyces cerevisiae W303   1 1
No Yes Saccharomyces cerevisiae JAY291   1 1
No Yes Saccharomyces cerevisiae AWRI1631   1 1
No Yes Saccharomyces cerevisiae YPS163   1 1
No Yes Saccharomyces cerevisiae T73   1 1
No Yes Saccharomyces cerevisiae CLIB215   1 1
No Yes Saccharomyces cerevisiae Y10   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae YJM789   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae RM11-1a   1 1
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 1 1
No Yes Schizosaccharomyces pombe 972h-   1 1
No Yes Batrachochytrium dendrobatidis JEL423   4 4
No Yes Batrachochytrium dendrobatidis JAM81   3 3
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 5 5
No Yes Hordeum vulgare 22 Domesticated barley 5 5
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 5 5
No Yes Homo sapiens 75_37 (old version GRC) Human 11 11
No Yes Homo sapiens (NCBI version) Human 6 6
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 3 3
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 2 2
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 3 3
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 3 3
No Yes Picea sitchensis (Incomplete) Sitka spruce 2 2
No Yes Lotus japonicus (Early assembly)   3 3
No Yes Malus x domestica (Duplicate) Apple 7 7
No Yes Ricinus communis (Early assembly) Castor bean 6 6
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   17 17
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 7 7
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 7 7
No Yes Phoenix dactylifera (Early draft) Date palm 4 4
No Yes Homo sapiens 69_37 Human 3 3
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 2 2
No Yes Gorilla gorilla 69_3.1 Western gorilla 3 3
No Yes Pongo abelii 69_2 Sumatran orangutan 2 2
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 2 2
No Yes Macaca mulatta 69_1 Rhesus monkey 4 4
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 3 3
No Yes Otolemur garnettii 69_3 Small-eared galago 3 3
No Yes Microcebus murinus 69_1 Gray mouse lemur 3 3
No Yes Rattus norvegicus 69_3.4 Norway rat 3 3
No Yes Mus musculus 69_38 House mouse 3 3
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 2 2
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 2 2
No Yes Cavia porcellus 69_3 Domestic guinea pig 3 3
No Yes Oryctolagus cuniculus 69_2 Rabbit 3 3
No Yes Ochotona princeps 69 American pika 3 3
No Yes Tupaia belangeri 69 Northern tree shrew 2 2
No Yes Sus scrofa 69_10.2 Pig 3 3
No Yes Bos taurus 69_3.1 Cattle 3 3
No Yes Vicugna pacos 69_1 Alpaca 3 3
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 2 2
No Yes Mustela putorius furo 69_1.0 Domestic ferret 3 3
No Yes Ailuropoda melanoleuca 69_1 Giant panda 3 3
No Yes Canis familiaris 69_3.1 Dog 3 3
No Yes Felis catus 69 Domestic cat 2 2
No Yes Equus caballus 69_2 Horse 3 3
No Yes Myotis lucifugus 69_2.0 Little brown bat 2 2
No Yes Pteropus vampyrus 69_1 Large flying fox 3 3
No Yes Sorex araneus 69_1 European shrew 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 2 2
No Yes Procavia capensis 69_1 Cape rock hyrax 3 3
No Yes Loxodonta africana 69_3 African savanna elephant 3 3
No Yes Echinops telfairi 69 Small Madagascar hedgehog 1 1
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 2 2
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 1 1
No Yes Macropus eugenii 69_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 3 3
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 3 3
No Yes Ornithorhynchus anatinus 69_5 Platypus 2 2
No Yes Petromyzon marinus 69_7.0 Sea lamprey 2 2
No Yes Meleagris gallopavo 69_2 Turkey 3 3
No Yes Gallus gallus 69_2 Chicken 2 2
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 2 2
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 69_2.0 Green anole 3 3
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 3 3
No Yes Latimeria chalumnae 69_1 Coelacanth 4 4
No Yes Gadus morhua 69_1 Atlantic cod 1 1
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 4 4
No Yes Takifugu rubripes 69_4 Torafugu 3 3
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 3 3
No Yes Oryzias latipes 69_1 Japanese medaka 1 1
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 3 3
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 4 4
No Yes Danio rerio 69_9 Zebrafish 3 3
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 1 1
No Yes Drosophila melanogaster 69_5 Fruit fly 3 3
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 1 1
No Yes Arabidopsis thaliana 10 Thale cress 8 8
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   3458 3457
No Yes Protozoadb 2010_08 (Protozoadb)   9 9
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   266 266
No Yes Uniprot 2018_03 genome   4395 4392
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   1 1
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   3 3
No Yes TargetDB (Targets)   6 6

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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