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Nickel-containing superoxide dismutase, NiSOD superfamily domain assignments
in
Micromonospora aurantiaca ATCC 27029

Assignment details

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Micromonospora aurantiaca ATCC 27029 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|302869680|ref|YP_003838317.1|   2.88e-52   16-133   Nickel-containing superoxide dismutase, NiSOD  

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Select to display   Genome       Domains   Proteins
No Yes ALL   4800 4800
No Yes Bathycoccus prasinos   1 1
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Bigelowiella natans CCMP2755 22   3 3
No Yes Phaeodactylum tricornutumCCAP 1055/1   1 1
No Yes Symbiodinium minutum clade B1 v1.2   1 1
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Emiliania huxleyi CCMP1516   2 2
No Yes Leptolyngbya sp. PCC 7376   1 1
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Synechococcus sp. CC9311   2 2
No Yes Prochlorococcus marinus str. MIT 9515   1 1
No Yes Trichodesmium erythraeum IMS101   1 1
No Yes cyanobacterium UCYN-A   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Rivularia sp. PCC 7116   1 1
No Yes Ilumatobacter coccineus   1 1
No Yes Acidimicrobium ferrooxidans DSM 10331   1 1
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Nakamurella multipartita DSM 44233   1 1
No Yes Acidothermus cellulolyticus 11B   1 1
No Yes Modestobacter marinus   1 1
No Yes Blastococcus saxobsidens DD2   1 1
No Yes Geodermatophilus obscurus DSM 43160   1 1
No Yes Catenulispora acidiphila DSM 44928   1 1
No Yes Stackebrandtia nassauensis DSM 44728   1 1
No Yes Frankia symbiont of Datisca glomerata   1 1
No Yes Frankia sp. EAN1pec   1 1
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   1 1
No Yes Kitasatospora setae KM-6054   1 1
No Yes Streptomyces coelicolor A3(2)   1 1
No Yes Streptomyces sp. PAMC26508   1 1
No Yes Streptomyces flavogriseus ATCC 33331   1 1
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   1 1
No Yes Streptomyces bingchenggensis BCW-1   1 1
No Yes Streptomyces violaceusniger Tu 4113   1 1
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces scabiei 87.22   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   1 1
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Pseudonocardia dioxanivorans CB1190   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Nocardioides sp. JS614   1 1
No Yes Salinispora arenicola CNS-205   1 1
No Yes Salinispora tropica CNB-440   1 1
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   1 1
No Yes Actinoplanes sp. SE50/110   1 1
No Yes Actinoplanes missouriensis 431   2 2
No Yes Mycobacterium vanbaalenii PYR-1   1 1
No Yes Mycobacterium rhodesiae NBB3   1 1
No Yes Mycobacterium gilvum PYR-GCK   1 1
No Yes Mycobacterium chubuense NBB4   1 1
No Yes Kytococcus sedentarius DSM 20547   1 1
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Coraliomargarita akajimensis DSM 45221   1 1
No Yes Ilyobacter polytropus DSM 2926   1 1
No Yes Desulfotalea psychrophila LSv54   1 1
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Desulfobacterium autotrophicum HRM2   1 1
No Yes Desulfovibrio piezophilus   1 1
No Yes Hirschia baltica ATCC 49814   1 1
No Yes Shewanella piezotolerans WP3   1 1
No Yes Shewanella woodyi ATCC 51908   1 1
No Yes Shewanella violacea DSS12   1 1
No Yes Colwellia psychrerythraea 34H   1 1
No Yes Marinomonas posidonica IVIA-Po-181   1 1
No Yes Marinomonas sp. MWYL1   1 1
No Yes Marinomonas mediterranea MMB-1   1 1
No Yes Dactylococcopsis salina PCC 8305   1 1
No Yes Synechococcus sp. CC9902   1 1
No Yes Synechococcus sp. CC9605   1 1
No Yes Synechococcus sp. WH 8102   1 1
No Yes Prochlorococcus marinus str. NATL1A   1 1
No Yes Prochlorococcus marinus str. MIT 9301   1 1
No Yes Prochlorococcus marinus str. AS9601   1 1
No Yes Prochlorococcus marinus subsp. marinus str. CCMP1375   1 1
No Yes Prochlorococcus marinus subsp. pastoris str. CCMP1986   1 1
No Yes Prochlorococcus marinus str. MIT 9215   1 1
No Yes Prochlorococcus marinus str. MIT 9211   1 1
No Yes Prochlorococcus marinus str. MIT 9313   1 1
No Yes Prochlorococcus marinus str. MIT 9312   1 1
No Yes Prochlorococcus marinus str. MIT 9303   1 1
No Yes Prochlorococcus marinus str. NATL2A   1 1
No Yes Cyanobacterium aponinum PCC 10605   1 1
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Frankia sp. EuI1c   1 1
No Yes Streptomyces albus J1074   1 1
No Yes Streptomyces rapamycinicus NRRL 5491   1 1
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces fulvissimus DSM 40593   1 1
No Yes Streptomyces venezuelae ATCC 10712   1 1
No Yes Streptomyces collinus Tu 365   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   1 1
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Actinoplanes friuliensis DSM 7358   1 1
No Yes Mycobacterium gilvum Spyr1   1 1
No Yes Psychroflexus torquis ATCC 700755   1 1
No Yes Glaciecola psychrophila 170   1 1
No Yes Alteromonas macleodii str. 'English Channel 673'   1 1
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   1 1
No Yes Alteromonas macleodii ATCC 27126   1 1
No Yes Methylophaga sp. JAM7   1 1
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   3 3
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   4 4
No Yes NCBI 2017_08 genome   1856 1856
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   4 4
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   12 12
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   9 9
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   13 13
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   4 4
No Yes STRING v9.0.5 (STRING)   46 46
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   1 1
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   1762 1762
No Yes Global Ocean Sampling Expedition (GOS)   476 476
No Yes NCBI plasmid sequences (Plasmids)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   3 3
No Yes Protein Data Bank (all PDB sequenc)   84 84
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   252 252

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