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Hypothetical protein At3g22680 superfamily domain assignments
in
Theobroma cacao Matina 1-6 v0.9

Network of domain occurrence in all genomes


Assignment details

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Theobroma cacao Matina 1-6 v0.9 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
CGD0006386   1.57e-35   82-205   Hypothetical protein At3g22680  
CGD0019448   1.24e-63   55-174   Hypothetical protein At3g22680  
 
Weak hits:
CGD0009587   0.0824   483-553   Hypothetical protein At3g22680  
CGD0011474   0.0955   285-346   Hypothetical protein At3g22680  

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Select to display   Genome       Domains   Proteins
No Yes ALL   547 547
No Yes Eucalyptus grandis v201 Rose gum 1 1
No Yes Theobroma cacao B97-61/B2 v1 Cacao 2 2
No Yes Gossypium raimondii v221   4 4
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 2 2
No Yes Thellungiella halophila v173   3 3
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 2 2
No Yes Capsella rubella v183   1 1
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Medicago truncatula Barrel medic 3 3
No Yes Phaseolus vulgaris v186 French bean 3 3
No Yes Glycine max v109 Soybean 4 4
No Yes Cucumis sativus v122 Cucumber 3 3
No Yes Fragaria vesca Wild strawberry 2 2
No Yes Malus domestica v196 Apple 1 1
No Yes Prunus persica v139 Peach 2 2
No Yes Linum usitatissimum v200 Flax 4 4
No Yes Manihot esculenta v147 Cassava 3 3
No Yes Populus trichocarpa v156 Black cottonwood 3 3
No Yes Vitis vinifera Wine grape 1 1
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 6 5
No Yes Solanum tuberosum Potato 8 8
No Yes Actinidia chinensis Hongyang   2 2
No Yes Aquilegia coerulea v195   1 1
No Yes Triticum urartu 22   1 1
No Yes Triticum aestivum 22 Bread wheat 1 1
No Yes Aegilops tauschii 22   1 1
No Yes Oryza punctata 22   1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 2 2
No Yes Oryza sativa v193 Rice 2 2
No Yes Panicum virgatum v202 Switchgrass 3 3
No Yes Setaria italica v164 Foxtail millet 1 1
No Yes Zea mays subsp. mays Maize 3 2
No Yes Zea mays v181 Maize 4 3
No Yes Musa balbisiana Balbis banana 1 1
No Yes Amborella trichopoda 22   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 2 2
No Yes Hordeum vulgare 22 Domesticated barley 1 1
No Yes Lotus japonicus (Early assembly)   3 3
No Yes Malus x domestica (Duplicate) Apple 1 1
No Yes Ricinus communis (Early assembly) Castor bean 2 2
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   4 4
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 6 5
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 6 5
No Yes Phoenix dactylifera (Early draft) Date palm 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes NCBI 2017_08 genome   213 213
No Yes STRING v9.0.5 (STRING)   6 6
No Yes Uniprot 2018_03 genome   157 155
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   3 3
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   6 6
No Yes TargetDB (Targets)   1 1

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