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Putative modulator of DNA gyrase, PmbA/TldD family domain assignments


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Select to display   Genome       Domains   Proteins
No Yes ALL   68955 68955
No Yes Daphnia pulex Common water flea 1 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1 1
No Yes Acholeplasma laidlawii PG-8A   1 1
No Yes Leptolyngbya sp. PCC 7376   3 3
No Yes Pseudanabaena sp. PCC 7367   2 2
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Synechocystis sp. PCC 6803   2 2
No Yes Thermosynechococcus sp. NK55   2 2
No Yes Thermosynechococcus elongatus BP-1   2 2
No Yes Synechococcus sp. PCC 7502   3 3
No Yes Synechococcus sp. PCC 6312   1 1
No Yes Synechococcus sp. CC9311   1 1
No Yes Synechococcus elongatus PCC 7942   2 2
No Yes Prochlorococcus marinus str. MIT 9515   1 1
No Yes Microcoleus sp. PCC 7113   2 2
No Yes Trichodesmium erythraeum IMS101   1 1
No Yes Geitlerinema sp. PCC 7407   2 2
No Yes Cyanothece sp. PCC 8802   2 2
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes cyanobacterium UCYN-A   2 2
No Yes Halothece sp. PCC 7418   1 1
No Yes Microcystis aeruginosa NIES-843   3 3
No Yes Gloeobacter violaceus PCC 7421   2 2
No Yes Rivularia sp. PCC 7116   2 2
No Yes Calothrix sp. PCC 7507   2 2
No Yes Anabaena variabilis ATCC 29413   2 2
No Yes 'Nostoc azollae' 0708   2 2
No Yes Nostoc sp. PCC 7107   2 2
No Yes Nostoc punctiforme PCC 73102   2 2
No Yes Nostoc sp. PCC 7120   2 2
No Yes Nostoc sp. PCC 7524   2 2
No Yes Anabaena sp. 90   2 2
No Yes Candidatus Phytoplasma mali   1 1
No Yes Aster yellows witches'-broom phytoplasma AYWB   1 1
No Yes Onion yellows phytoplasma OY-M   1 1
No Yes Ilumatobacter coccineus   2 2
No Yes Acidimicrobium ferrooxidans DSM 10331   1 1
No Yes Dehalococcoides ethenogenes 195   1 1
No Yes Dehalococcoides sp. BAV1   1 1
No Yes Dehalogenimonas lykanthroporepellens BL-DC-9   1 1
No Yes Deinococcus deserti VCD115   2 2
No Yes Oceanithermus profundus DSM 14977   2 2
No Yes Marinithermus hydrothermalis DSM 14884   2 2
No Yes Meiothermus silvanus DSM 9946   1 1
No Yes Meiothermus ruber DSM 1279   2 2
No Yes Thermus sp. CCB_US3_UF1   1 1
No Yes Thermus scotoductus SA-01   2 2
No Yes Thermus thermophilus HB27   2 2
No Yes Natranaerobius thermophilus JW/NM-WN-LF   3 3
No Yes Candidatus Desulforudis audaxviator MP104C   2 2
No Yes Thermincola potens JR   2 2
No Yes Pelotomaculum thermopropionicum SI   2 2
No Yes Desulfotomaculum reducens MI-1   2 2
No Yes Desulfotomaculum acetoxidans DSM 771   2 2
No Yes Desulfotomaculum kuznetsovii DSM 6115   2 2
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   2 2
No Yes Desulfotomaculum ruminis DSM 2154   2 2
No Yes Clostridium difficile 630   2 2
No Yes Clostridium sticklandii DSM 519   2 2
No Yes Clostridium phytofermentans ISDg   2 2
No Yes Syntrophothermus lipocalidus DSM 12680   2 2
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   2 2
No Yes Heliobacterium modesticaldum Ice1   2 2
No Yes Alkaliphilus oremlandii OhILAs   2 2
No Yes Clostridium beijerinckii NCIMB 8052   2 2
No Yes Clostridium perfringens ATCC 13124   2 2
No Yes Clostridium acetobutylicum ATCC 824   2 2
No Yes Coprothermobacter proteolyticus DSM 5265   2 2
No Yes Thermoanaerobacter tengcongensis MB4   2 2
No Yes Carboxydothermus hydrogenoformans Z-2901   2 2
No Yes Moorella thermoacetica ATCC 39073   2 2
No Yes Ammonifex degensii KC4   2 2
No Yes Acetohalobium arabaticum DSM 5501   2 2
No Yes Paenibacillus terrae HPL-003   2 2
No Yes Paenibacillus polymyxa M1   2 2
No Yes Lysinibacillus sphaericus C3-41   1 1
No Yes Marivirga tractuosa DSM 4126   1 1
No Yes Leadbetterella byssophila DSM 17132   1 1
No Yes Parabacteroides distasonis ATCC 8503   2 2
No Yes Tannerella forsythia ATCC 43037   2 2
No Yes Bacteroides sp. CF50   1 1
No Yes Bacteroides helcogenes P 36-108   1 1
No Yes Bacteroides thetaiotaomicron VPI-5482   2 2
No Yes Zunongwangia profunda SM-A87   1 1
No Yes Gramella forsetii KT0803   1 1
No Yes Robiginitalea biformata HTCC2501   1 1
No Yes Muricauda ruestringensis DSM 13258   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   2 2
No Yes Thermovirga lienii DSM 17291   2 2
No Yes Aminobacterium colombiense DSM 12261   2 2
No Yes Anaerobaculum mobile DSM 13181   2 2
No Yes Turneriella parva DSM 21527   1 1
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   2 2
No Yes Leptospira interrogans serovar Lai str. IPAV   2 2
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   2 2
No Yes Brachyspira murdochii DSM 12563   1 1
No Yes Brachyspira intermedia PWS/A   2 2
No Yes Brachyspira pilosicoli 95/1000   2 2
No Yes Brachyspira hyodysenteriae WA1   2 2
No Yes Treponema denticola ATCC 35405   1 1
No Yes Thermodesulfatator indicus DSM 15286   2 2
No Yes Thermodesulfobacterium sp. OPB45   2 2
No Yes Denitrovibrio acetiphilus DSM 12809   2 2
No Yes Deferribacter desulfuricans SSM1   2 2
No Yes Marinitoga piezophila KA3   2 2
No Yes Petrotoga mobilis SJ95   2 2
No Yes Mesotoga prima MesG1.Ag.4.2   2 2
No Yes Kosmotoga olearia TBF 19.5.1   4 4
No Yes Fervidobacterium pennivorans DSM 9078   2 2
No Yes Fervidobacterium nodosum Rt17-B1   2 2
No Yes Thermosipho melanesiensis BI429   2 2
No Yes Thermosipho africanus TCF52B   2 2
No Yes Thermotoga lettingae TMO   2 2
No Yes Thermotoga thermarum DSM 5069   2 2
No Yes Thermotoga sp. RQ2   2 2
No Yes Thermotoga naphthophila RKU-10   2 2
No Yes Thermotoga petrophila RKU-1   2 2
No Yes Thermotoga neapolitana DSM 4359   2 2
No Yes Thermotoga maritima MSB8   2 2
No Yes Thermovibrio ammonificans HB-1   2 2
No Yes Desulfurobacterium thermolithotrophum DSM 11699   2 2
No Yes Sulfurihydrogenibium sp. YO3AOP1   2 2
No Yes Sulfurihydrogenibium azorense Az-Fu1   2 2
No Yes Hydrogenobaculum sp. SN   2 2
No Yes Hydrogenobaculum sp. HO   2 2
No Yes Hydrogenobaculum sp. Y04AAS1   2 2
No Yes Thermocrinis albus DSM 14484   2 2
No Yes Aquifex aeolicus VF5   2 2
No Yes Hydrogenobacter thermophilus TK-6   2 2
No Yes Dictyoglomus turgidum DSM 6724   5 5
No Yes Dictyoglomus thermophilum H-6-12   5 5
No Yes Candidatus Chloracidobacterium thermophilum B   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   2 2
No Yes Granulicella tundricola MP5ACTX9   2 2
No Yes Granulicella mallensis MP5ACTX8   2 2
No Yes Candidatus Koribacter versatilis Ellin345   2 2
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Terriglobus roseus DSM 18391   1 1
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Thermodesulfovibrio yellowstonii DSM 11347   2 2
No Yes Candidatus Nitrospira defluvii   1 1
No Yes Leptospirillum ferrooxidans C2-3   2 2
No Yes Ilyobacter polytropus DSM 2926   1 1
No Yes Candidatus Methylomirabilis oxyfera   2 2
No Yes Acidithiobacillus ferrivorans SS3   1 1
No Yes Acidithiobacillus caldus SM-1   1 1
No Yes Acidithiobacillus ferrooxidans ATCC 53993   1 1
No Yes Bacteriovorax marinus SJ   2 2
No Yes Bdellovibrio bacteriovorus HD100   1 1
No Yes Desulfarculus baarsii DSM 2075   3 3
No Yes Hippea maritima DSM 10411   2 2
No Yes Geobacter daltonii FRC-32   2 2
No Yes Geobacter sp. M21   2 2
No Yes Geobacter uraniireducens Rf4   2 2
No Yes Geobacter bemidjiensis Bem   2 2
No Yes Geobacter sulfurreducens KN400   2 2
No Yes Geobacter metallireducens GS-15   2 2
No Yes Haliangium ochraceum DSM 14365   2 2
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Anaeromyxobacter sp. Fw109-5   2 2
No Yes Anaeromyxobacter dehalogenans 2CP-1   2 2
No Yes Stigmatella aurantiaca DW4/3-1   2 2
No Yes Corallococcus coralloides DSM 2259   2 2
No Yes Myxococcus xanthus DK 1622   2 2
No Yes Myxococcus fulvus HW-1   2 2
No Yes Dechloromonas aromatica RCB   1 1
No Yes Thauera sp. MZ1T   2 2
No Yes Azoarcus sp. KH32C   2 2
No Yes Azoarcus sp. BH72   2 2
No Yes Aromatoleum aromaticum EbN1   2 2
No Yes Dechlorosoma suillum PS   2 2
No Yes Pseudogulbenkiania sp. NH8B   2 2
No Yes Laribacter hongkongensis HLHK9   2 2
No Yes Chromobacterium violaceum ATCC 12472   1 1
No Yes Neisseria meningitidis alpha14   1 1
No Yes Neisseria meningitidis FAM18   1 1
No Yes Neisseria lactamica 020-06   1 1
No Yes Neisseria gonorrhoeae NCCP11945   1 1
No Yes syncytium symbiont of Diaphorina citri   1 1
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   1 1
No Yes beta proteobacterium CB   1 1
No Yes Methylibium petroleiphilum PM1   2 2
No Yes Thiomonas arsenitoxydans   1 1
No Yes Thiomonas intermedia K12   1 1
No Yes Rubrivivax gelatinosus IL144   2 2
No Yes Leptothrix cholodnii SP-6   1 1
No Yes Burkholderia rhizoxinica HKI 454   1 1
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Burkholderia xenovorans LB400   1 1
No Yes Ralstonia eutropha JMP134   1 1
No Yes Cupriavidus taiwanensis LMG 19424   1 1
No Yes Cupriavidus metallidurans CH34   1 1
No Yes Cupriavidus necator N-1   1 1
No Yes Ralstonia eutropha H16   1 1
No Yes Ralstonia pickettii 12D   1 1
No Yes Ralstonia solanacearum CFBP2957   1 1
No Yes Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1   1 1
No Yes Burkholderia sp. RPE64   1 1
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Burkholderia thailandensis E264   1 1
No Yes Burkholderia pseudomallei 1106a   1 1
No Yes Burkholderia mallei SAVP1   1 1
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Burkholderia cenocepacia HI2424   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia vietnamiensis G4   1 1
No Yes Burkholderia gladioli BSR3   3 3
No Yes Burkholderia glumae BGR1   3 3
No Yes Verminephrobacter eiseniae EF01-2   2 2
No Yes Alicycliphilus denitrificans K601   1 1
No Yes Ramlibacter tataouinensis TTB310   2 2
No Yes Delftia sp. Cs1-4   2 2
No Yes Delftia acidovorans SPH-1   2 2
No Yes Polaromonas sp. JS666   2 2
No Yes Polaromonas naphthalenivorans CJ2   2 2
No Yes Variovorax paradoxus S110   2 2
No Yes Rhodoferax ferrireducens T118   2 2
No Yes Acidovorax ebreus TPSY   2 2
No Yes Acidovorax sp. KKS102   2 2
No Yes Acidovorax sp. JS42   2 2
No Yes Acidovorax citrulli AAC00-1   1 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860   1 1
No Yes Comamonas testosteroni CNB-2   1 1
No Yes Herminiimonas arsenicoxydans   1 1
No Yes Collimonas fungivorans Ter331   1 1
No Yes Janthinobacterium sp. Marseille   1 1
No Yes Herbaspirillum seropedicae SmR1   3 3
No Yes Pusillimonas sp. T7-7   2 2
No Yes Taylorella asinigenitalis MCE3   1 1
No Yes Taylorella equigenitalis MCE9   1 1
No Yes Bordetella petrii DSM 12804   1 1
No Yes Bordetella avium 197N   1 1
No Yes Bordetella pertussis Tohama I   1 1
No Yes Bordetella parapertussis 12822   1 1
No Yes Bordetella bronchiseptica RB50   1 1
No Yes Achromobacter xylosoxidans A8   2 2
No Yes Achromobacter xylosoxidans   1 1
No Yes Thiobacillus denitrificans ATCC 25259   2 2
No Yes Nitrosospira multiformis ATCC 25196   2 2
No Yes Nitrosomonas sp. Is79A3   1 1
No Yes Nitrosomonas eutropha C91   2 2
No Yes Nitrosomonas europaea ATCC 19718   2 2
No Yes Sideroxydans lithotrophicus ES-1   1 1
No Yes Gallionella capsiferriformans ES-2   2 2
No Yes Methylotenera versatilis 301   1 1
No Yes Methylotenera mobilis JLW8   1 1
No Yes Methylovorus sp. MP688   1 1
No Yes Methylovorus glucosetrophus SIP3-4   1 1
No Yes Methylobacillus flagellatus KT   1 1
No Yes Parvularcula bermudensis HTCC2503   1 1
No Yes Asticcacaulis excentricus CB 48   2 2
No Yes Brevundimonas subvibrioides ATCC 15264   1 1
No Yes Caulobacter sp. K31   1 1
No Yes Caulobacter crescentus NA1000   1 1
No Yes Caulobacter segnis ATCC 21756   1 1
No Yes Phenylobacterium zucineum HLK1   1 1
No Yes Sphingopyxis alaskensis RB2256   1 1
No Yes Novosphingobium sp. PP1Y   2 2
No Yes Novosphingobium aromaticivorans DSM 12444   1 1
No Yes Sphingobium sp. SYK-6   2 2
No Yes Sphingobium japonicum UT26S   1 1
No Yes Sphingobium chlorophenolicum L-1   1 1
No Yes Sphingomonas sp. MM-1   2 2
No Yes Sphingomonas wittichii RW1   1 1
No Yes Zymomonas mobilis subsp. mobilis NCIMB 11163   2 2
No Yes Maricaulis maris MCS10   1 1
No Yes Hirschia baltica ATCC 49814   1 1
No Yes Hyphomonas neptunium ATCC 15444   2 2
No Yes Dinoroseobacter shibae DFL 12   1 1
No Yes Phaeobacter gallaeciensis 2.10   1 1
No Yes Pseudovibrio sp. FO-BEG1   1 1
No Yes Jannaschia sp. CCS1   1 1
No Yes Ruegeria sp. TM1040   1 1
No Yes Ruegeria pomeroyi DSS-3   1 1
No Yes Ketogulonicigenium vulgare Y25   1 1
No Yes Ketogulonigenium vulgarum WSH-001   1 1
No Yes Roseobacter litoralis Och 149   1 1
No Yes Roseobacter denitrificans OCh 114   1 1
No Yes Rhodobacter sphaeroides ATCC 17029   1 1
No Yes Rhodobacter capsulatus SB 1003   1 1
No Yes Paracoccus denitrificans PD1222   1 1
No Yes Rhodospirillum photometricum DSM 122   1 1
No Yes Tistrella mobilis KA081020-065   2 2
No Yes Magnetospirillum magneticum AMB-1   1 1
No Yes Rhodospirillum centenum SW   2 2
No Yes Rhodospirillum rubrum F11   1 1
No Yes Azospirillum lipoferum 4B   1 1
No Yes Azospirillum sp. B510   1 1
No Yes Azospirillum brasilense Sp245   1 1
No Yes Gluconacetobacter xylinus NBRC 3288   1 1
No Yes Granulibacter bethesdensis CGDNIH1   2 2
No Yes Gluconacetobacter diazotrophicus PAl 5   1 1
No Yes Acidiphilium multivorum AIU301   1 1
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Gluconobacter oxydans 621H   1 1
No Yes Acetobacter pasteurianus IFO 3283-01   2 2
No Yes Polymorphum gilvum SL003B-26A1   1 1
No Yes Micavibrio aeruginosavorus ARL-13   2 2
No Yes Candidatus Puniceispirillum marinum IMCC1322   1 1
No Yes alpha proteobacterium HIMB5   1 1
No Yes Candidatus Pelagibacter sp. IMCC9063   2 2
No Yes Neorickettsia sennetsu str. Miyayama   2 2
No Yes Neorickettsia risticii str. Illinois   1 1
No Yes Wolbachia endosymbiont of Culex quinquefasciatus Pel   1 1
No Yes Wolbachia sp. wRi   2 2
No Yes Ehrlichia chaffeensis str. Arkansas   1 1
No Yes Ehrlichia canis str. Jake   1 1
No Yes Ehrlichia ruminantium str. Gardel   1 1
No Yes Anaplasma phagocytophilum HZ   1 1
No Yes Anaplasma marginale str. Florida   1 1
No Yes Anaplasma centrale str. Israel   1 1
No Yes Parvibaculum lavamentivorans DS-1   1 1
No Yes Ochrobactrum anthropi ATCC 49188   1 1
No Yes Brucella microti CCM 4915   1 1
No Yes Brucella pinnipedialis B2/94   1 1
No Yes Brucella canis ATCC 23365   1 1
No Yes Brucella suis ATCC 23445   1 1
No Yes Brucella melitensis ATCC 23457   1 1
No Yes Brucella ovis ATCC 25840   1 1
No Yes Brucella abortus S19   1 1
No Yes Sinorhizobium fredii NGR234   1 1
No Yes Sinorhizobium medicae WSM419   1 1
No Yes Sinorhizobium meliloti AK83   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   1 1
No Yes Rhizobium etli CIAT 652   1 1
No Yes Rhizobium leguminosarum bv. viciae 3841   1 1
No Yes Agrobacterium tumefaciens str. C58   1 1
No Yes Agrobacterium radiobacter K84   1 1
No Yes Agrobacterium sp. H13-3   1 1
No Yes Agrobacterium vitis S4   1 1
No Yes Mesorhizobium sp. BNC1   1 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Oligotropha carboxidovorans OM4   1 1
No Yes Rhodopseudomonas palustris BisA53   1 1
No Yes Nitrobacter winogradskyi Nb-255   1 1
No Yes Nitrobacter hamburgensis X14   1 1
No Yes Bradyrhizobium japonicum USDA 110   1 1
No Yes Bradyrhizobium sp. ORS 278   1 1
No Yes Bartonella tribocorum CIP 105476   1 1
No Yes Bartonella clarridgeiae 73   2 2
No Yes Bartonella henselae str. Houston-1   2 2
No Yes Bartonella grahamii as4aup   1 1
No Yes Bartonella quintana str. Toulouse   2 2
No Yes Bartonella bacilliformis KC583   1 1
No Yes Aggregatibacter aphrophilus NJ8700   1 1
No Yes Aggregatibacter actinomycetemcomitans D7S-1   1 1
No Yes Haemophilus somnus 129PT   2 2
No Yes Gallibacterium anatis UMN179   1 1
No Yes Pasteurella multocida subsp. multocida str. 3480   1 1
No Yes Haemophilus parasuis SH0165   1 1
No Yes Haemophilus ducreyi 35000HP   2 2
No Yes Haemophilus parainfluenzae T3T1   1 1
No Yes Haemophilus influenzae PittEE   1 1
No Yes Actinobacillus succinogenes 130Z   2 2
No Yes Actinobacillus pleuropneumoniae serovar 5b str. L20   2 2
No Yes Oceanimonas sp. GK1   1 1
No Yes Tolumonas auensis DSM 9187   1 1
No Yes Aeromonas veronii B565   2 2
No Yes Aeromonas salmonicida subsp. salmonicida A449   2 2
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   2 2
No Yes Aliivibrio salmonicida LFI1238   2 2
No Yes Vibrio fischeri MJ11   2 2
No Yes Vibrio sp. Ex25   4 4
No Yes Vibrio harveyi ATCC BAA-1116   4 4
No Yes Vibrio parahaemolyticus RIMD 2210633   3 3
No Yes Vibrio splendidus LGP32   2 2
No Yes Vibrio anguillarum 775   2 2
No Yes Vibrio furnissii NCTC 11218   1 1
No Yes Vibrio vulnificus MO6-24/O   3 3
No Yes Vibrio cholerae O395   1 1
No Yes Photobacterium profundum SS9   3 3
No Yes Psychromonas ingrahamii 37   1 1
No Yes Psychromonas sp. CNPT3   2 2
No Yes Idiomarina loihiensis L2TR   1 1
No Yes Ferrimonas balearica DSM 9799   1 1
No Yes Shewanella piezotolerans WP3   1 1
No Yes Shewanella loihica PV-4   1 1
No Yes Shewanella halifaxensis HAW-EB4   2 2
No Yes Shewanella sediminis HAW-EB3   1 1
No Yes Shewanella denitrificans OS217   2 2
No Yes Shewanella pealeana ATCC 700345   2 2
No Yes Shewanella oneidensis MR-1   1 1
No Yes Shewanella baltica OS185   2 2
No Yes Shewanella woodyi ATCC 51908   1 1
No Yes Shewanella sp. MR-4   2 2
No Yes Shewanella amazonensis SB2B   2 2
No Yes Shewanella violacea DSS12   1 1
No Yes Shewanella frigidimarina NCIMB 400   2 2
No Yes Shewanella putrefaciens CN-32   2 2
No Yes Colwellia psychrerythraea 34H   1 1
No Yes Pseudoalteromonas sp. SM9913   1 1
No Yes Pseudoalteromonas atlantica T6c   1 1
No Yes Pseudoalteromonas haloplanktis TAC125   1 1
No Yes Glaciecola sp. 4H-3-7+YE-5   1 1
No Yes Glaciecola nitratireducens FR1064   1 1
No Yes Alteromonas sp. SN2   1 1
No Yes Alteromonas macleodii str. 'Deep ecotype'   2 2
No Yes Kangiella koreensis DSM 16069   2 2
No Yes Alcanivorax borkumensis SK2   1 1
No Yes Chromohalobacter salexigens DSM 3043   2 2
No Yes Halomonas elongata DSM 2581   1 1
No Yes Methylomicrobium alcaliphilum   2 2
No Yes Methylomonas methanica MC09   2 2
No Yes Methylococcus capsulatus str. Bath   2 2
No Yes Dichelobacter nodosus VCS1703A   2 2
No Yes Rhodanobacter denitrificans   1 1
No Yes Frateuria aurantia DSM 6220   1 1
No Yes Pseudoxanthomonas spadix BD-a59   1 1
No Yes Pseudoxanthomonas suwonensis 11-1   1 1
No Yes Stenotrophomonas maltophilia K279a   1 1
No Yes Xylella fastidiosa M23   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   2 2
No Yes Xanthomonas albilineans GPE PC73   1 1
No Yes Xanthomonas oryzae pv. oryzae PXO99A   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   2 2
No Yes Alkalilimnicola ehrlichii MLHE-1   2 2
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   1 1
No Yes Thioalkalivibrio sp. K90mix   1 1
No Yes Halorhodospira halophila SL1   2 2
No Yes Allochromatium vinosum DSM 180   2 2
No Yes Thiocystis violascens DSM 198   3 3
No Yes Nitrosococcus halophilus Nc4   2 2
No Yes Coxiella burnetii Dugway 5J108-111   2 2
No Yes Legionella longbeachae NSW150   1 1
No Yes Legionella pneumophila str. Corby   1 1
No Yes Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)   2 2
No Yes Candidatus Vesicomyosocius okutanii HA   2 2
No Yes Photorhabdus asymbiotica   1 1
No Yes Photorhabdus luminescens subsp. laumondii TTO1   1 1
No Yes Xenorhabdus bovienii SS-2004   2 2
No Yes Xenorhabdus nematophila ATCC 19061   1 1
No Yes Providencia stuartii MRSN 2154   2 2
No Yes Proteus mirabilis HI4320   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Edwardsiella tarda EIB202   1 1
No Yes Rahnella sp. Y9602   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia pestis Pestoides F   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   1 1
No Yes Serratia sp. AS12   1 1
No Yes Serratia sp. ATCC 39006   1 1
No Yes Serratia plymuthica AS9   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Dickeya dadantii Ech703   1 1
No Yes Dickeya zeae Ech1591   1 1
No Yes Pectobacterium wasabiae WPP163   1 1
No Yes Pectobacterium sp. SCC3193   1 1
No Yes Pectobacterium atrosepticum SCRI1043   2 2
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   2 2
No Yes Halyomorpha halys symbiont   1 1
No Yes Pantoea sp. At-9b   1 1
No Yes Pantoea vagans C9-1   1 1
No Yes Pantoea ananatis LMG 20103   2 2
No Yes Erwinia tasmaniensis Et1/99   1 1
No Yes Erwinia sp. Ejp617   1 1
No Yes Erwinia billingiae Eb661   1 1
No Yes Erwinia pyrifoliae Ep1/96   1 1
No Yes Erwinia amylovora ATCC 49946   1 1
No Yes Escherichia blattae DSM 4481   1 1
No Yes Candidatus Moranella endobia PCIT   1 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Cronobacter sakazakii ES15   1 1
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   1 1
No Yes Candidatus Blochmannia floridanus   1 1
No Yes Enterobacteriaceae bacterium strain FGI 57   1 1
No Yes Shigella sonnei Ss046   1 1
No Yes Shigella flexneri 5 str. 8401   1 1
No Yes Shigella dysenteriae Sd197   1 1
No Yes Shigella boydii CDC 3083-94   1 1
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   1 1
No Yes Klebsiella oxytoca E718   1 1
No Yes Klebsiella variicola At-22   1 1
No Yes Klebsiella pneumoniae NTUH-K2044   1 1
No Yes Enterobacter aerogenes KCTC 2190   1 1
No Yes Escherichia fergusonii ATCC 35469   1 1
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   1 1
No Yes Enterobacter sp. R4-368   1 1
No Yes Enterobacter sp. 638   1 1
No Yes Enterobacter asburiae LF7a   1 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   2 2
No Yes Citrobacter rodentium ICC168   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Azotobacter vinelandii DJ   1 1
No Yes Pseudomonas sp. TKP   1 1
No Yes Pseudomonas sp. UW4   1 1
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   1 1
No Yes Pseudomonas entomophila L48   1 1
No Yes Pseudomonas syringae pv. tomato str. DC3000   1 1
No Yes Pseudomonas stutzeri A1501   1 1
No Yes Pseudomonas fulva 12-X   1 1
No Yes Pseudomonas putida F1   1 1
No Yes Pseudomonas protegens Pf-5   1 1
No Yes Pseudomonas fluorescens SBW25   1 1
No Yes Pseudomonas mendocina ymp   1 1
No Yes Pseudomonas aeruginosa UCBPP-PA14   1 1
No Yes Pseudomonas sp. VLB120   1 1
No Yes Methylophaga sp. JAM1   1 1
No Yes Cycloclasticus sp. P1   1 1
No Yes Candidatus Caldiarchaeum subterraneum   1 1
No Yes Candidatus Nitrosopumilus sp. AR2   1 1
No Yes Nitrosopumilus maritimus SCM1   1 1
No Yes Candidatus Korarchaeum cryptofilum OPF8   2 2
No Yes Pyrolobus fumarii 1A   1 1
No Yes Hyperthermus butylicus DSM 5456   2 2
No Yes Thermogladius cellulolyticus 1633   3 3
No Yes Ignisphaera aggregans DSM 17230   3 3
No Yes Thermosphaera aggregans DSM 11486   3 3
No Yes Staphylothermus hellenicus DSM 12710   4 4
No Yes Staphylothermus marinus F1   4 4
No Yes Desulfurococcus fermentans DSM 16532   3 3
No Yes Desulfurococcus kamchatkensis 1221n   3 3
No Yes Desulfurococcus mucosus DSM 2162   3 3
No Yes Thermofilum sp. 1910b   3 3
No Yes Thermofilum pendens Hrk 5   3 3
No Yes Methanocella arvoryzae MRE50   4 4
No Yes Methanocella conradii HZ254   4 4
No Yes Methanocella paludicola SANAE   4 4
No Yes Methanosaeta harundinacea 6Ac   2 2
No Yes Methanosaeta thermophila PT   2 2
No Yes Methanosaeta concilii GP6   2 2
No Yes Methanosalsum zhilinae DSM 4017   2 2
No Yes Methanohalobium evestigatum Z-7303   2 2
No Yes Methanococcoides burtonii DSM 6242   2 2
No Yes Methanosarcina acetivorans C2A   2 2
No Yes Methanosarcina mazei Go1   2 2
No Yes Methanosarcina barkeri str. Fusaro   2 2
No Yes Methanohalophilus mahii DSM 5219   2 2
No Yes Methanosphaerula palustris E1-9c   2 2
No Yes Methanoregula boonei 6A8   1 1
No Yes Methanospirillum hungatei JF-1   1 1
No Yes Methanocorpusculum labreanum Z   2 2
No Yes Methanoplanus petrolearius DSM 11571   2 2
No Yes Methanoculleus bourgensis MS2   1 1
No Yes Methanoculleus marisnigri JR1   2 2
No Yes Ferroglobus placidus DSM 10642   2 2
No Yes Archaeoglobus profundus DSM 5631   2 2
No Yes Archaeoglobus veneficus SNP6   2 2
No Yes Archaeoglobus fulgidus DSM 4304   2 2
No Yes Thermococcus sp. 4557   5 5
No Yes Thermococcus onnurineus NA1   5 5
No Yes Thermococcus kodakarensis KOD1   5 5
No Yes Thermococcus gammatolerans EJ3   5 5
No Yes Thermococcus sibiricus MM 739   4 4
No Yes Thermococcus barophilus MP   5 5
No Yes Pyrococcus sp. ST04   3 3
No Yes Pyrococcus yayanosii CH1   5 5
No Yes Pyrococcus horikoshii OT3   5 5
No Yes Pyrococcus abyssi GE5   6 6
No Yes Pyrococcus furiosus COM1   5 5
No Yes Thermoplasma volcanium GSS1   1 1
No Yes Picrophilus torridus DSM 9790   1 1
No Yes Methanotorris igneus Kol 5   2 2
No Yes Methanocaldococcus sp. FS406-22   2 2
No Yes Methanocaldococcus fervens AG86   2 2
No Yes Methanocaldococcus vulcanius M7   2 2
No Yes methanocaldococcus infernus ME   2 2
No Yes Methanocaldococcus jannaschii DSM 2661   2 2
No Yes Methanothermococcus okinawensis IH1   2 2
No Yes Methanococcus aeolicus Nankai-3   2 2
No Yes Methanococcus maripaludis C5   2 2
No Yes Methanococcus voltae A3   2 2
No Yes Methanococcus vannielii SB   2 2
No Yes Methanothermus fervidus DSM 2088   2 2
No Yes Methanothermobacter marburgensis str. Marburg   2 2
No Yes Methanothermobacter thermautotrophicus str. Delta H   2 2
No Yes Methanosphaera stadtmanae DSM 3091   2 2
No Yes Methanobrevibacter sp. AbM4   2 2
No Yes Methanobrevibacter ruminantium M1   2 2
No Yes Methanobrevibacter smithii ATCC 35061   2 2
No Yes Complete genome sequence of Methanobacterium sp. Mb1   2 2
No Yes Aciduliprofundum sp. MAR08-339   2 2
No Yes Aciduliprofundum boonei T469   3 3
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 1 1
No Yes Chroococcidiopsis thermalis PCC 7203   2 2
No Yes Chamaesiphon minutus PCC 6605   2 2
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   2 2
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   2 2
No Yes Synechocystis sp. PCC 6803 substr. GT-I   2 2
No Yes Synechocystis sp. PCC 6803   2 2
No Yes Cyanobium gracile PCC 6307   1 1
No Yes Dactylococcopsis salina PCC 8305   1 1
No Yes Synechococcus sp. JA-2-3B'a(2-13)   3 3
No Yes Synechococcus sp. JA-3-3Ab   3 3
No Yes Synechococcus sp. CC9902   1 1
No Yes Synechococcus sp. RCC307   1 1
No Yes Synechococcus sp. CC9605   1 1
No Yes Synechococcus sp. WH 8102   1 1
No Yes Synechococcus sp. WH 7803   1 1
No Yes Synechococcus sp. PCC 7002   2 2
No Yes Synechococcus elongatus PCC 6301   2 2
No Yes Prochlorococcus marinus str. NATL1A   2 2
No Yes Prochlorococcus marinus str. MIT 9301   1 1
No Yes Prochlorococcus marinus str. AS9601   1 1
No Yes Prochlorococcus marinus subsp. marinus str. CCMP1375   1 1
No Yes Prochlorococcus marinus subsp. pastoris str. CCMP1986   1 1
No Yes Prochlorococcus marinus str. MIT 9215   1 1
No Yes Prochlorococcus marinus str. MIT 9211   1 1
No Yes Prochlorococcus marinus str. MIT 9313   1 1
No Yes Prochlorococcus marinus str. MIT 9312   1 1
No Yes Prochlorococcus marinus str. MIT 9303   1 1
No Yes Prochlorococcus marinus str. NATL2A   2 2
No Yes Crinalium epipsammum PCC 9333   3 3
No Yes Oscillatoria nigro-viridis PCC 7112   3 3
No Yes Oscillatoria acuminata PCC 6304   3 3
No Yes Arthrospira platensis NIES-39   2 2
No Yes Cyanothece sp. PCC 7822   2 2
No Yes Cyanothece sp. PCC 7425   2 2
No Yes Cyanothece sp. PCC 7424   2 2
No Yes Cyanothece sp. ATCC 51142   2 2
No Yes Cyanothece sp. PCC 8801   2 2
No Yes Cyanobacterium aponinum PCC 10605   2 2
No Yes Cyanobacterium stanieri PCC 7202   3 3
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   3 3
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   3 3
No Yes Stanieria cyanosphaera PCC 7437   3 3
No Yes Calothrix parietina Calothrix sp. PCC 6303   2 2
No Yes Cylindrospermum stagnale PCC 7417   2 2
No Yes Anabaena cylindrica PCC 7122   2 2
No Yes Candidatus Phytoplasma solani tobfin_28409   1 1
No Yes Candidatus Phytoplasma australiense Strawberry lethal yellows phytoplasma (CPA) str. NZSb11   1 1
No Yes Candidatus Phytoplasma australiense   1 1
No Yes Dehalococcoides mccartyi GY50   1 1
No Yes Dehalococcoides mccartyi DCMB5   1 1
No Yes Dehalococcoides mccartyi BTF08   1 1
No Yes Dehalococcoides sp. GT   1 1
No Yes Dehalococcoides sp. VS   1 1
No Yes Dehalococcoides sp. CBDB1   1 1
No Yes Deinococcus peraridilitoris DSM 19664   2 2
No Yes Thermus oshimai JL-2   2 2
No Yes Thermus thermophilus JL-18   2 2
No Yes Thermus thermophilus SG0.5JP17-16   2 2
No Yes [Eubacterium] cylindroides [Eubacterium] cylindroides T2-87   2 2
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   3 3
No Yes Clostridium acidurici 9a   2 2
No Yes Desulfotomaculum gibsoniae DSM 7213   2 2
No Yes Clostridium difficile BI1   2 2
No Yes Clostridium difficile R20291   2 2
No Yes Clostridium difficile CD196   2 2
No Yes Clostridium saccharobutylicum DSM 13864   2 2
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   2 2
No Yes Clostridium perfringens SM101   2 2
No Yes Clostridium perfringens str. 13   2 2
No Yes Clostridium botulinum E3 str. Alaska E43   2 2
No Yes Clostridium acetobutylicum DSM 1731   2 2
No Yes Clostridium acetobutylicum EA 2018   2 2
No Yes Thermacetogenium phaeum DSM 12270   2 2
No Yes Halobacteroides halobius DSM 5150   2 2
No Yes Paenibacillus polymyxa CR1   2 2
No Yes Paenibacillus polymyxa SC2   2 2
No Yes Paenibacillus polymyxa E681   2 2
No Yes Fibrobacter succinogenes subsp. succinogenes S85   2 2
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   2 2
No Yes Leptospira interrogans serovar Lai str. 56601   2 2
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   2 2
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   2 2
No Yes Brachyspira pilosicoli WesB   2 2
No Yes Brachyspira pilosicoli B2904   2 2
No Yes Brachyspira pilosicoli P43/6/78   2 2
No Yes Treponema pedis str. T A4   1 1
No Yes Thermotoga maritima MSB8   2 2
No Yes Hydrogenobacter thermophilus TK-6   2 2
No Yes Leptospirillum ferriphilum ML-04   2 2
No Yes Acidithiobacillus ferrooxidans ATCC 23270   1 1
No Yes Bdellovibrio bacteriovorus str. Tiberius   1 1
No Yes Geobacter sp. M18   2 2
No Yes Geobacter sulfurreducens PCA   2 2
No Yes Sorangium cellulosum So0157-2   2 2
No Yes Anaeromyxobacter sp. K   2 2
No Yes Anaeromyxobacter dehalogenans 2CP-C   2 2
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Neisseria meningitidis WUE 2594   1 1
No Yes Neisseria meningitidis G2136   1 1
No Yes Neisseria meningitidis M04-240196   1 1
No Yes Neisseria meningitidis M01-240149   1 1
No Yes Neisseria meningitidis NZ-05/33   1 1
No Yes Neisseria meningitidis M01-240355   1 1
No Yes Neisseria meningitidis 8013   1 1
No Yes Neisseria meningitidis 053442   1 1
No Yes Neisseria meningitidis Z2491   1 1
No Yes Neisseria meningitidis H44/76   1 1
No Yes Neisseria meningitidis alpha710   1 1
No Yes Neisseria meningitidis MC58   1 1
No Yes Neisseria gonorrhoeae TCDC-NG08107   1 1
No Yes Neisseria gonorrhoeae FA 1090   1 1
No Yes Candidatus Kinetoplastibacterium oncopeltii TCC290E   2 2
No Yes Candidatus Kinetoplastibacterium galatii TCC219   2 2
No Yes Candidatus Kinetoplastibacterium desouzaii TCC079E   1 1
No Yes Kinetoplastibacterium blastocrithidii Candidatus (ex Strigomonas culicis)   2 2
No Yes Kinetoplastibacterium blastocrithidii Candidatus TCC012E   2 2
No Yes Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei ATCC 30255)   1 1
No Yes Candidatus Kinetoplastibacterium crithidii TCC036E   1 1
No Yes Burkholderia phenoliruptrix BR3459a   1 1
No Yes Pandoraea pnomenusa 3kgm   1 1
No Yes Ralstonia pickettii 12J   1 1
No Yes Ralstonia solanacearum FQY_4   1 1
No Yes Ralstonia solanacearum Po82   1 1
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Ralstonia solanacearum CMR15   1 1
No Yes Ralstonia solanacearum GMI1000   1 1
No Yes Polynucleobacter necessarius subsp. necessarius STIR1   1 1
No Yes Burkholderia sp. YI23   1 1
No Yes Burkholderia sp. CCGE1003   3 3
No Yes Burkholderia sp. CCGE1001   1 1
No Yes Burkholderia sp. KJ006   1 1
No Yes Burkholderia thailandensis MSMB121   1 1
No Yes Burkholderia pseudomallei MSHR305   1 1
No Yes Burkholderia pseudomallei NCTC 13179   1 1
No Yes Burkholderia pseudomallei BPC006   1 1
No Yes Burkholderia pseudomallei 1026b   1 1
No Yes Burkholderia pseudomallei MSHR346   1 1
No Yes Burkholderia pseudomallei 668   1 1
No Yes Burkholderia pseudomallei 1710b   1 1
No Yes Burkholderia pseudomallei K96243   1 1
No Yes Burkholderia mallei NCTC 10229   1 1
No Yes Burkholderia mallei NCTC 10247   1 1
No Yes Burkholderia mallei ATCC 23344   1 1
No Yes Burkholderia lata   1 1
No Yes Burkholderia ambifaria MC40-6   1 1
No Yes Burkholderia cenocepacia MC0-3   3 3
No Yes Burkholderia cenocepacia AU 1054   1 1
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia cepacia GG4   1 1
No Yes Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR   1 1
No Yes Alicycliphilus denitrificans BC   1 1
No Yes Variovorax paradoxus B4   1 1
No Yes Variovorax paradoxus EPS   2 2
No Yes Taylorella asinigenitalis 14/45   1 1
No Yes Taylorella equigenitalis 14/56   1 1
No Yes Taylorella equigenitalis ATCC 35865   1 1
No Yes Bordetella pertussis CS   1 1
No Yes Bordetella parapertussis 18323   1 1
No Yes Bordetella parapertussis Bpp5   1 1
No Yes Bordetella bronchiseptica MO149   1 1
No Yes Bordetella bronchiseptica 253   1 1
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   1 1
No Yes Nitrosomonas sp. AL212   1 1
No Yes Sulfuricella denitrificans skB26   2 2
No Yes Caulobacter crescentus CB15   1 1
No Yes Zymomonas mobilis subsp. mobilis ATCC 29191   1 1
No Yes Zymomonas mobilis subsp. mobilis CP4   2 2
No Yes Zymomonas mobilis subsp. mobilis ATCC 10988   2 2
No Yes Zymomonas mobilis subsp. mobilis ZM4   2 2
No Yes Zymomonas mobilis subsp. pomaceae ATCC 29192   2 2
No Yes Phaeobacter gallaeciensis DSM 17395   1 1
No Yes Phaeobacter gallaeciensis DSM 26640   1 1
No Yes Leisingera methylohalidivorans DSM 14336   1 1
No Yes Octadecabacter antarcticus 307   1 1
No Yes Octadecabacter arcticus 238   1 1
No Yes Rhodobacter sphaeroides KD131   1 1
No Yes Rhodobacter sphaeroides ATCC 17025   1 1
No Yes Rhodobacter sphaeroides 2.4.1   1 1
No Yes Paracoccus aminophilus JCM 7686   1 1
No Yes Candidatus Endolissoclinum faulkneri L2   2 2
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   1 1
No Yes Rhodospirillum rubrum ATCC 11170   1 1
No Yes Gluconacetobacter diazotrophicus PAl 5   1 1
No Yes Gluconobacter oxydans H24   1 1
No Yes Acetobacter pasteurianus 386B   2 2
No Yes Acetobacter pasteurianus IFO 3283-12   2 2
No Yes Acetobacter pasteurianus IFO 3283-01-42C   2 2
No Yes Acetobacter pasteurianus IFO 3283-32   2 2
No Yes Acetobacter pasteurianus IFO 3283-26   2 2
No Yes Acetobacter pasteurianus IFO 3283-22   2 2
No Yes Acetobacter pasteurianus IFO 3283-07   2 2
No Yes Acetobacter pasteurianus IFO 3283-03   2 2
No Yes Micavibrio aeruginosavorus EPB   2 2
No Yes Candidatus Pelagibacter ubique HTCC1062   1 1
No Yes Wolbachia endosymbiont of Drosophila melanogaster   2 2
No Yes Wolbachia endosymbiont of Onchocerca ochengi str. Adamawa_Cameroon   1 1
No Yes Wolbachia endosymbiont strain TRS of Brugia malayi   2 2
No Yes Wolbachia endosymbiont of Drosophila simulans wHa   2 2
No Yes Wolbachia endosymbiont of Drosophila simulans wNo   2 2
No Yes Ehrlichia muris AS145   1 1
No Yes Ehrlichia ruminantium str. Welgevonden   1 1
No Yes Ehrlichia ruminantium str. Welgevonden   1 1
No Yes Anaplasma phagocytophilum str. Dog2   1 1
No Yes Anaplasma phagocytophilum str. HZ2   1 1
No Yes Anaplasma phagocytophilum str. JM   1 1
No Yes Anaplasma marginale str. Dawn   1 1
No Yes Anaplasma marginale str. Gypsy Plains   1 1
No Yes Anaplasma marginale str. St. Maries   1 1
No Yes Brucella ceti TE10759-12   1 1
No Yes Brucella ceti TE28753-12   1 1
No Yes Brucella canis HSK A52141   1 1
No Yes Brucella suis VBI22   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella melitensis NI   1 1
No Yes Brucella melitensis M5-90   1 1
No Yes Brucella melitensis M28   1 1
No Yes Brucella melitensis bv. 1 str. 16M   1 1
No Yes Brucella abortus A13334   1 1
No Yes Brucella melitensis biovar Abortus 2308   1 1
No Yes Brucella abortus bv. 1 str. 9-941   1 1
No Yes Sinorhizobium fredii USDA 257   1 1
No Yes Sinorhizobium fredii HH103   1 1
No Yes Sinorhizobium meliloti 2011   1 1
No Yes Sinorhizobium meliloti GR4   1 1
No Yes Sinorhizobium meliloti Rm41   1 1
No Yes Sinorhizobium meliloti SM11   1 1
No Yes Sinorhizobium meliloti BL225C   1 1
No Yes Sinorhizobium meliloti 1021   1 1
No Yes Rhizobium etli CFN 42   1 1
No Yes Rhizobium etli bv. mimosae str. Mim1   1 1
No Yes Rhizobium tropici CIAT 899   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   1 1
No Yes Liberibacter crescens BT-1   1 1
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Rhodopseudomonas palustris DX-1   1 1
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Rhodopseudomonas palustris BisB5   1 1
No Yes Rhodopseudomonas palustris BisB18   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Bradyrhizobium sp. S23321   1 1
No Yes Bradyrhizobium sp. BTAi1   1 1
No Yes Bradyrhizobium oligotrophicum S58   1 1
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Bartonella australis Aust/NH1   1 1
No Yes Bartonella vinsonii subsp. berkhoffii str. Winnie   2 2
No Yes Bartonella quintana RM-11   1 1
No Yes Mannheimia succiniciproducens MBEL55E   2 2
No Yes Bibersteinia trehalosi USDA-ARS-USMARC-192   1 1
No Yes Aggregatibacter actinomycetemcomitans ANH9381   1 1
No Yes Aggregatibacter actinomycetemcomitans D11S-1   1 1
No Yes Haemophilus somnus 2336   2 2
No Yes Mannheimia haemolytica USMARC_2286   1 1
No Yes Mannheimia haemolytica M42548   1 1
No Yes Mannheimia haemolytica D174   1 1
No Yes Mannheimia haemolytica D171   1 1
No Yes Mannheimia haemolytica D153   1 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-183   1 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-185   1 1
No Yes Pasteurella multocida 36950   1 1
No Yes Pasteurella multocida subsp. multocida str. HN06   1 1
No Yes Pasteurella multocida subsp. multocida str. Pm70   1 1
No Yes Haemophilus parasuis ZJ0906   2 2
No Yes Haemophilus influenzae KR494   1 1
No Yes Haemophilus influenzae F3047   1 1
No Yes Haemophilus influenzae F3031   1 1
No Yes Haemophilus influenzae 10810   1 1
No Yes Haemophilus influenzae PittGG   1 1
No Yes Haemophilus influenzae 86-028NP   1 1
No Yes Haemophilus influenzae R2866   1 1
No Yes Haemophilus influenzae R2846   1 1
No Yes Haemophilus influenzae Rd KW20   1 1
No Yes Actinobacillus suis H91-0380   2 2
No Yes Actinobacillus pleuropneumoniae serovar 3 str. JL03   2 2
No Yes Actinobacillus pleuropneumoniae serovar 7 str. AP76   2 2
No Yes Aeromonas hydrophila ML09-119   2 2
No Yes Vibrio fischeri ES114   2 2
No Yes Vibrio sp. EJY3   4 4
No Yes Vibrio parahaemolyticus BB22OP   3 3
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   4 4
No Yes Vibrio anguillarum Listonella anguillarum M3   2 2
No Yes Vibrio nigripulchritudo VibrioScope   1 1
No Yes Vibrio vulnificus CMCP6   3 3
No Yes Vibrio vulnificus YJ016   3 3
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   1 1
No Yes Idiomarina loihiensis GSL 199   1 1
No Yes Shewanella sp. W3-18-1   2 2
No Yes Shewanella sp. ANA-3   2 2
No Yes Shewanella baltica BA175   2 2
No Yes Shewanella baltica OS678   2 2
No Yes Shewanella baltica OS117   2 2
No Yes Shewanella baltica OS223   2 2
No Yes Shewanella baltica OS195   2 2
No Yes Shewanella baltica OS155   2 2
No Yes Shewanella sp. MR-7   2 2
No Yes Shewanella putrefaciens 200   2 2
No Yes Glaciecola psychrophila 170   2 2
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   2 2
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   2 2
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   2 2
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   2 2
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   2 2
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   2 2
No Yes Alteromonas macleodii str. 'English Channel 615'   1 1
No Yes Alteromonas macleodii AltDE1   2 2
No Yes Alteromonas macleodii str. 'English Channel 673'   2 2
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   2 2
No Yes Alteromonas macleodii str. 'Black Sea 11'   2 2
No Yes Alteromonas macleodii ATCC 27126   2 2
No Yes Alcanivorax dieselolei B5   1 1
No Yes Stenotrophomonas maltophilia D457   1 1
No Yes Stenotrophomonas maltophilia JV3   1 1
No Yes Stenotrophomonas maltophilia R551-3   1 1
No Yes Xylella fastidiosa subsp. fastidiosa GB514   1 1
No Yes Xylella fastidiosa M12   1 1
No Yes Xylella fastidiosa Temecula1   1 1
No Yes Xylella fastidiosa 9a5c   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   2 2
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   2 2
No Yes Xanthomonas oryzae pv. oryzicola BLS256   1 1
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   1 1
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   1 1
No Yes Xanthomonas campestris pv. raphani 756C   2 2
No Yes Xanthomonas campestris pv. campestris str. 8004   2 2
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   2 2
No Yes Thioalkalivibrio nitratireducens DSM 14787   1 1
No Yes Thioflavicoccus mobilis 8321   2 2
No Yes Coxiella burnetii CbuK_Q154   2 2
No Yes Coxiella burnetii CbuG_Q212   2 2
No Yes Coxiella burnetii RSA 331   2 2
No Yes Coxiella burnetii RSA 493   2 2
No Yes Legionella pneumophila str. Paris   1 1
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   1 1
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Proteus mirabilis BB2000   1 1
No Yes Morganella morganii subsp. morganii KT   2 2
No Yes Edwardsiella tarda C07-087   1 1
No Yes Edwardsiella tarda FL6-60   1 1
No Yes Rahnella aquatilis HX2   1 1
No Yes Yersinia pseudotuberculosis PB1/+   1 1
No Yes Yersinia pseudotuberculosis YPIII   1 1
No Yes Yersinia pseudotuberculosis IP 32953   1 1
No Yes Yersinia pestis biovar Microtus str. 91001   1 1
No Yes Yersinia pestis A1122   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   1 1
No Yes Yersinia pestis Nepal516   1 1
No Yes Yersinia pestis Antiqua   1 1
No Yes Yersinia pestis Angola   1 1
No Yes Yersinia pestis CO92   1 1
No Yes Yersinia pestis KIM10+   1 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   1 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   1 1
No Yes Serratia sp. AS13   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Serratia plymuthica 4Rx13   1 1
No Yes Serratia marcescens FGI94   1 1
No Yes Serratia marcescens WW4   1 1
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Dickeya dadantii Ech586   1 1
No Yes Dickeya dadantii 3937   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   2 2
No Yes Pantoea ananatis LMG 5342   2 2
No Yes Pantoea ananatis PA13   2 2
No Yes Pantoea ananatis AJ13355   2 2
No Yes Buchnera aphidicola str. Ak (Acyrthosiphon kondoi)   1 1
No Yes Buchnera aphidicola str. Bp (Baizongia pistaciae)   1 1
No Yes Buchnera aphidicola str. Ua (Uroleucon ambrosiae)   1 1
No Yes Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)   2 2
No Yes Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)   2 2
No Yes Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)   2 2
No Yes Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)   2 2
No Yes Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)   2 2
No Yes Buchnera aphidicola str. 5A (Acyrthosiphon pisum)   2 2
No Yes Buchnera aphidicola str. APS (Acyrthosiphon pisum)   2 2
No Yes Buchnera aphidicola str. Sg (Schizaphis graminum)   1 1
No Yes Erwinia pyrifoliae DSM 12163   1 1
No Yes Erwinia amylovora CFBP1430   1 1
No Yes Candidatus Moranella endobia PCVAL   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Cronobacter sakazakii SP291   1 1
No Yes Cronobacter sakazakii ATCC BAA-894   1 1
No Yes Candidatus Blochmannia chromaiodes str. 640   1 1
No Yes Candidatus Blochmannia vafer str. BVAF   1 1
No Yes Candidatus Blochmannia pennsylvanicus str. BPEN   1 1
No Yes Raoultella ornithinolytica B6   1 1
No Yes Shigella sonnei 53G   1 1
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella flexneri 2a str. 2457T   1 1
No Yes Shigella flexneri 2a str. 301   1 1
No Yes Shigella dysenteriae 1617   1 1
No Yes Shigella boydii Sb227   1 1
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   1 1
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   1 1
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   1 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   1 1
No Yes Klebsiella oxytoca KCTC 1686   1 1
No Yes Klebsiella pneumoniae JM45   1 1
No Yes Klebsiella pneumoniae CG43   1 1
No Yes Klebsiella pneumoniae KCTC 2242   1 1
No Yes Klebsiella pneumoniae 342   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   1 1
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   1 1
No Yes Enterobacter aerogenes EA1509E   1 1
No Yes Escherichia coli E24377A   1 1
No Yes Escherichia coli E. coli PMV-1   1 1
No Yes Escherichia coli JJ1886   1 1
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli APEC O78   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2050   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   1 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli NA114   1 1
No Yes Escherichia coli P12b   1 1
No Yes Escherichia coli str. 'clone D i2'   1 1
No Yes Escherichia coli str. 'clone D i14'   1 1
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli Xuzhou21   1 1
No Yes Escherichia coli IHE3034   1 1
No Yes Escherichia coli UMNK88   1 1
No Yes Escherichia coli O83:H1 str. NRG 857C   1 1
No Yes Escherichia coli ABU 83972   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli LF82   1 1
No Yes Escherichia coli ED1a   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Escherichia coli UMN026   1 1
No Yes Escherichia coli 55989   1 1
No Yes Escherichia coli S88   1 1
No Yes Escherichia coli IAI1   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli ATCC 8739   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SMS-3-5   1 1
No Yes Escherichia coli SE15   1 1
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli APEC O1   1 1
No Yes Escherichia coli O103:H2 str. 12009   1 1
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli 536   1 1
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli O55:H7 str. RM12579   1 1
No Yes Escherichia coli O55:H7 str. CB9615   1 1
No Yes Escherichia coli O26:H11 str. 11368   1 1
No Yes Escherichia coli CFT073   1 1
No Yes Escherichia coli O111:H- str. 11128   1 1
No Yes Escherichia coli O127:H6 str. E2348/69   1 1
No Yes Escherichia coli O157:H7 str. TW14359   1 1
No Yes Escherichia coli O157:H7 str. EC4115   1 1
No Yes Escherichia coli O157:H7 str. Sakai   1 1
No Yes Escherichia coli O157:H7 str. EDL933   1 1
No Yes Escherichia coli str. K-12 substr. MDS42   1 1
No Yes Escherichia coli BW2952   1 1
No Yes Escherichia coli str. K-12 substr. MG1655   1 1
No Yes Escherichia coli str. K-12 substr. W3110   1 1
No Yes Escherichia coli str. K-12 substr. DH10B   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Enterobacter cloacae SCF1   1 1
No Yes Enterobacter cloacae EcWSU1   1 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   2 2
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   1 1
No Yes Azotobacter vinelandii CA6   1 1
No Yes Azotobacter vinelandii CA   1 1
No Yes Pseudomonas denitrificans ATCC 13867   1 1
No Yes Pseudomonas syringae pv. phaseolicola 1448A   1 1
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes Pseudomonas stutzeri CCUG 29243   2 2
No Yes Pseudomonas stutzeri DSM 10701   2 2
No Yes Pseudomonas stutzeri DSM 4166   1 1
No Yes Pseudomonas stutzeri RCH2   2 2
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   1 1
No Yes Pseudomonas monteilii SB3101   1 1
No Yes Pseudomonas monteilii SB3078   1 1
No Yes Pseudomonas putida H8234   1 1
No Yes Pseudomonas putida HB3267   1 1
No Yes Pseudomonas putida NBRC 14164   1 1
No Yes Pseudomonas putida DOT-T1E   1 1
No Yes Pseudomonas putida S16   1 1
No Yes Pseudomonas putida BIRD-1   1 1
No Yes Pseudomonas putida W619   1 1
No Yes Pseudomonas putida ND6   1 1
No Yes Pseudomonas putida KT2440   1 1
No Yes Pseudomonas putida GB-1   1 1
No Yes Pseudomonas protegens CHA0   1 1
No Yes Pseudomonas poae RE*1-1-14   1 1
No Yes Pseudomonas fluorescens F113   1 1
No Yes Pseudomonas fluorescens A506   1 1
No Yes Pseudomonas fluorescens R124   1 1
No Yes Pseudomonas fluorescens Pf0-1   1 1
No Yes Pseudomonas resinovorans NBRC 106553   1 1
No Yes Pseudomonas mendocina NK-01   1 1
No Yes Pseudomonas aeruginosa SCV20265   1 1
No Yes Pseudomonas aeruginosa MTB-1   1 1
No Yes Pseudomonas aeruginosa LES431   1 1
No Yes Pseudomonas aeruginosa RP73   1 1
No Yes Pseudomonas aeruginosa B136-33   1 1
No Yes Pseudomonas aeruginosa PA1R   1 1
No Yes Pseudomonas aeruginosa PA1   1 1
No Yes Pseudomonas aeruginosa DK2   1 1
No Yes Pseudomonas aeruginosa NCGM2.S1   1 1
No Yes Pseudomonas aeruginosa M18   1 1
No Yes Pseudomonas aeruginosa LESB58   1 1
No Yes Pseudomonas aeruginosa PA7   1 1
No Yes Pseudomonas aeruginosa PAO1   1 1
No Yes Methylophaga sp. JAM7   1 1
No Yes Cycloclasticus zancles 7-ME   1 1
No Yes Candidatus Nitrososphaera gargensis Ga9.2   2 2
No Yes Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1   1 1
No Yes Methanomethylovorans hollandica DSM 15978   2 2
No Yes Methanolobus psychrophilus R15   2 2
No Yes Methanosarcina mazei Tuc01   2 2
No Yes Methanoregula formicica Methanoregula formicicum SMSP   1 1
No Yes Archaeoglobus sulfaticallidus PM70-1   2 2
No Yes Thermococcus sp. AM4   5 5
No Yes Thermococcus sp. CL1   6 6
No Yes Thermococcus litoralis DSM 5473   5 5
No Yes Pyrococcus sp. NA2   5 5
No Yes Pyrococcus furiosus DSM 3638   5 5
No Yes Methanococcus maripaludis X1   2 2
No Yes Methanococcus maripaludis C6   2 2
No Yes Methanococcus maripaludis C7   2 2
No Yes Methanococcus maripaludis S2   2 2
No Yes Methanobacterium sp. SWAN-1   2 2
No Yes Acholeplasma laidlawii PG-8A (duplicate)   1 1
No Yes Wolbachia endosymbiont of Brugia malayi v1.0 (Broad Institute)   2 2
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   4 4
No Yes 1_050719N (meta-genome)   20 20
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   8 8
No Yes 3_050719R (meta-genome)   4 4
No Yes 4_050719Q (meta-genome)   10 10
No Yes 5_050719P (meta-genome)   5 5
No Yes 6_Upper_euphotic (meta-genome)   4 4
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   5 5
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   7 7
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   2 2
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   6 6
No Yes Bath Hot Springs, filamentous community (meta-genome)   8 8
No Yes Bath Hot Springs, planktonic community (meta-genome)   10 10
No Yes Combined (meta-genome)   9 9
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   10 10
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   6 6
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   4 4
No Yes Dump bottom (Dump bottom) (meta-genome)   7 7
No Yes Dump top (Dump top) (meta-genome)   9 9
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   3 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   3 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   6 6
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   8 8
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   8 8
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   10 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   18 18
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   4 4
No Yes Human Gut Community Subject 7 (meta-genome)   3 3
No Yes Human Gut Community Subject 8 (meta-genome)   2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   4 4
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   34 34
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   6 6
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   11 11
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   12 12
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   4 4
No Yes NCBI 2017_08 genome   50409 50409
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   11 11
No Yes Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome)   3 3
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   9 9
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   10 10
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   8 8
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   7 7
No Yes Sludge/US, Jazz Assembly (meta-genome)   2 2
No Yes Sludge/US, Phrap Assembly (meta-genome)   3 3
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   8 8
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   2 2
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   7 7
No Yes STRING v9.0.5 (STRING)   790 790
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   3 3
No Yes Termite Protist Endosymbiont Community (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   13275 13274
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   20 20
No Yes Global Ocean Sampling Expedition (GOS)   1003 1003
No Yes NCBI plasmid sequences (Plasmids)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   3 3
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   20 20
No Yes TargetDB (Targets)   26 26
No Yes The Salmonella enterica Pan-genome (meta-genome)   31 31

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.