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  Home > Genomes > OmpH-like domains in all genomes


OmpH-like family domain assignments
in
all genomes

Assignment details

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25 selected genomes have 25 significant domains in 25 proteins.

Showing genomes 201 to 225 of 255
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Escherichia coli W has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386707906|ref|YP_006171627.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|386711134|ref|YP_006174855.1|   0.0327   0.027   29-103   1u2m A:  

Escherichia coli W has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386707906|ref|YP_006171627.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|386711134|ref|YP_006174855.1|   0.0327   0.027   29-103   1u2m A:  

Escherichia coli DH1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|387619945|ref|YP_006127572.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|387622894|ref|YP_006130522.1|   0.034   0.027   31-105   1u2m A:  

Escherichia coli DH1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|387619945|ref|YP_006127572.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|387622894|ref|YP_006130522.1|   0.034   0.027   31-105   1u2m A:  

Escherichia coli ATCC 8739 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|170021469|ref|YP_001726423.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|170018523|ref|YP_001723477.1|   0.0327   0.027   29-103   1u2m A:  

Escherichia coli BL21(DE3) has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|251783736|ref|YP_002998040.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|251786498|ref|YP_003000802.1|   0.0327   0.027   29-103   1u2m A:  

Escherichia coli BL21(DE3) has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|251783736|ref|YP_002998040.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|251786498|ref|YP_003000802.1|   0.0327   0.027   29-103   1u2m A:  

Escherichia coli SMS-3-5 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|170683286|ref|YP_001742306.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|170681571|ref|YP_001744552.1|   0.000000144   0.015   32-148   1u2m A:  
gi|170683379|ref|YP_001745505.1|   0.0327   0.027   29-103   1u2m A:  

Escherichia coli SE15 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|387828246|ref|YP_003348183.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|387831110|ref|YP_003351047.1|   0.0327   0.027   29-103   1u2m A:  

Escherichia coli SE11 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|209917368|ref|YP_002291452.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|209920703|ref|YP_002294787.1|   0.0327   0.027   29-103   1u2m A:  
gi|209921769|ref|YP_002295853.1|   0.0418   0.024   468-525   1u2m A:  
gi|209921891|ref|YP_002295970.1|   0.0654   0.008   14-102   1u2m A:  

Escherichia coli APEC O1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|117622463|ref|YP_851376.1|   6.41e-32   0.000000167   20-160   1u2m A:  

Escherichia coli O103:H2 str. 12009 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|260842410|ref|YP_003220188.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|260846040|ref|YP_003223818.1|   0.0327   0.027   29-103   1u2m A:  

Escherichia coli UTI89 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|91209248|ref|YP_539234.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|91212652|ref|YP_542638.1|   0.0327   0.027   29-103   1u2m A:  

Escherichia coli 536 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|110640397|ref|YP_668125.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|110640525|ref|YP_668253.1|   0.000562   0.008   14-101   1u2m A:  
gi|110643467|ref|YP_671197.1|   0.0327   0.027   29-103   1u2m A:  

Escherichia coli HS has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|157159643|ref|YP_001456961.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|157162711|ref|YP_001460029.1|   0.0327   0.027   29-103   1u2m A:  

Escherichia coli ETEC H10407 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|387610650|ref|YP_006113766.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|387613918|ref|YP_006117034.1|   0.0327   0.027   29-103   1u2m A:  

Escherichia coli O55:H7 str. RM12579 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|387505105|ref|YP_006157361.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|387508631|ref|YP_006160887.1|   0.0327   0.027   29-103   1u2m A:  

Escherichia coli O55:H7 str. CB9615 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|291281000|ref|YP_003497818.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|291284601|ref|YP_003501419.1|   0.0353   0.027   32-105   1u2m A:  

Escherichia coli O26:H11 str. 11368 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|260853388|ref|YP_003227279.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|260857353|ref|YP_003231244.1|   0.0327   0.027   29-103   1u2m A:  

Escherichia coli CFT073 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|26246124|ref|NP_752163.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|26248735|ref|NP_754775.1|   0.0000000811   0.015   32-148   1u2m A:  
gi|26249813|ref|NP_755853.1|   0.034   0.027   31-105   1u2m A:  

Escherichia coli O111:H- str. 11128 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|260866327|ref|YP_003232729.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|260869977|ref|YP_003236379.1|   0.0327   0.027   29-103   1u2m A:  

Escherichia coli O127:H6 str. E2348/69 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|215485339|ref|YP_002327770.1|   1.16e-31   0.000000178   20-160   1u2m A:  
 
Weak hits:
gi|215488541|ref|YP_002330972.1|   0.0327   0.027   29-103   1u2m A:  

Escherichia coli O157:H7 str. TW14359 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|254791311|ref|YP_003076148.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|254795176|ref|YP_003080013.1|   0.0327   0.027   29-103   1u2m A:  

Escherichia coli O157:H7 str. EC4115 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|209397674|ref|YP_002268786.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|209399934|ref|YP_002272696.1|   0.0327   0.027   29-103   1u2m A:  

Escherichia coli O157:H7 str. Sakai has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|15829434|ref|NP_308207.1|   6.41e-32   0.000000167   20-160   1u2m A:  
 
Weak hits:
gi|15833360|ref|NP_312133.1|   0.034   0.027   31-105   1u2m A:  

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Select to display   Genome       Domains   Proteins
No Yes ALL   23091 23091
No Yes Oceanimonas sp. GK1   1 1
No Yes Tolumonas auensis DSM 9187   1 1
No Yes Aeromonas veronii B565   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Baumannia cicadellinicola str. Hc (Homalodisca coagulata)   1 1
No Yes Photorhabdus asymbiotica   1 1
No Yes Photorhabdus luminescens subsp. laumondii TTO1   1 1
No Yes Xenorhabdus bovienii SS-2004   1 1
No Yes Xenorhabdus nematophila ATCC 19061   1 1
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Proteus mirabilis HI4320   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Edwardsiella tarda EIB202   1 1
No Yes Rahnella sp. Y9602   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia pestis Pestoides F   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   1 1
No Yes Serratia sp. AS12   1 1
No Yes Serratia symbiotica str. 'Cinara cedri'   1 1
No Yes Serratia sp. ATCC 39006   1 1
No Yes Serratia plymuthica AS9   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Dickeya dadantii Ech703   1 1
No Yes Dickeya zeae Ech1591   1 1
No Yes Pectobacterium wasabiae WPP163   1 1
No Yes Pectobacterium sp. SCC3193   1 1
No Yes Pectobacterium atrosepticum SCRI1043   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   1 1
No Yes Sodalis glossinidius str. 'morsitans'   1 1
No Yes Halyomorpha halys symbiont   1 1
No Yes Pantoea sp. At-9b   1 1
No Yes Pantoea vagans C9-1   1 1
No Yes Pantoea ananatis LMG 20103   1 1
No Yes Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis   1 1
No Yes Erwinia tasmaniensis Et1/99   1 1
No Yes Erwinia sp. Ejp617   1 1
No Yes Erwinia billingiae Eb661   1 1
No Yes Erwinia pyrifoliae Ep1/96   1 1
No Yes Erwinia amylovora ATCC 49946   1 1
No Yes Escherichia blattae DSM 4481   1 1
No Yes Candidatus Moranella endobia PCIT   1 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Cronobacter sakazakii ES15   1 1
No Yes secondary endosymbiont of Ctenarytaina eucalypti   1 1
No Yes Candidatus Blochmannia floridanus   1 1
No Yes Enterobacteriaceae bacterium strain FGI 57   1 1
No Yes Shigella sonnei Ss046   1 1
No Yes Shigella flexneri 5 str. 8401   1 1
No Yes Shigella dysenteriae Sd197   1 1
No Yes Shigella boydii CDC 3083-94   1 1
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   1 1
No Yes Klebsiella oxytoca E718   1 1
No Yes Klebsiella variicola At-22   1 1
No Yes Klebsiella pneumoniae NTUH-K2044   1 1
No Yes Enterobacter aerogenes KCTC 2190   1 1
No Yes Escherichia fergusonii ATCC 35469   1 1
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   1 1
No Yes Enterobacter sp. R4-368   1 1
No Yes Enterobacter sp. 638   1 1
No Yes Enterobacter asburiae LF7a   1 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   1 1
No Yes Citrobacter rodentium ICC168   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Proteus mirabilis BB2000   1 1
No Yes Morganella morganii subsp. morganii KT   1 1
No Yes Edwardsiella tarda C07-087   1 1
No Yes Edwardsiella tarda FL6-60   1 1
No Yes Rahnella aquatilis HX2   1 1
No Yes Yersinia pseudotuberculosis PB1/+   1 1
No Yes Yersinia pseudotuberculosis YPIII   1 1
No Yes Yersinia pseudotuberculosis IP 32953   1 1
No Yes Yersinia pestis biovar Microtus str. 91001   1 1
No Yes Yersinia pestis A1122   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   1 1
No Yes Yersinia pestis Nepal516   1 1
No Yes Yersinia pestis Antiqua   1 1
No Yes Yersinia pestis Angola   1 1
No Yes Yersinia pestis CO92   1 1
No Yes Yersinia pestis KIM10+   1 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   1 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   1 1
No Yes Serratia sp. AS13   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Serratia plymuthica 4Rx13   1 1
No Yes Serratia marcescens FGI94   1 1
No Yes Serratia marcescens WW4   1 1
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Dickeya dadantii Ech586   1 1
No Yes Dickeya dadantii 3937   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   1 1
No Yes Pantoea ananatis LMG 5342   1 1
No Yes Pantoea ananatis PA13   1 1
No Yes Pantoea ananatis AJ13355   1 1
No Yes Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony)   1 1
No Yes Erwinia pyrifoliae DSM 12163   1 1
No Yes Erwinia amylovora CFBP1430   1 1
No Yes Candidatus Moranella endobia PCVAL   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Cronobacter sakazakii SP291   1 1
No Yes Cronobacter sakazakii ATCC BAA-894   1 1
No Yes secondary endosymbiont of Heteropsylla cubana Thao2000   1 1
No Yes Candidatus Blochmannia chromaiodes str. 640   1 1
No Yes Candidatus Blochmannia vafer str. BVAF   1 1
No Yes Candidatus Blochmannia pennsylvanicus str. BPEN   1 1
No Yes Raoultella ornithinolytica B6   1 1
No Yes Shigella sonnei 53G   1 1
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella flexneri 2a str. 2457T   1 1
No Yes Shigella flexneri 2a str. 301   1 1
No Yes Shigella dysenteriae 1617   1 1
No Yes Shigella boydii Sb227   1 1
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   1 1
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   1 1
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   1 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   1 1
No Yes Klebsiella oxytoca KCTC 1686   1 1
No Yes Klebsiella pneumoniae JM45   1 1
No Yes Klebsiella pneumoniae CG43   1 1
No Yes Klebsiella pneumoniae KCTC 2242   1 1
No Yes Klebsiella pneumoniae 342   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   1 1
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   1 1
No Yes Enterobacter aerogenes EA1509E   1 1
No Yes Escherichia coli E24377A   1 1
No Yes Escherichia coli E. coli PMV-1   1 1
No Yes Escherichia coli JJ1886   1 1
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli APEC O78   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2050   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   1 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli NA114   1 1
No Yes Escherichia coli P12b   1 1
No Yes Escherichia coli str. 'clone D i2'   1 1
No Yes Escherichia coli str. 'clone D i14'   1 1
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli Xuzhou21   1 1
No Yes Escherichia coli IHE3034   1 1
No Yes Escherichia coli UMNK88   1 1
No Yes Escherichia coli O83:H1 str. NRG 857C   1 1
No Yes Escherichia coli ABU 83972   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli LF82   1 1
No Yes Escherichia coli ED1a   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Escherichia coli UMN026   1 1
No Yes Escherichia coli 55989   1 1
No Yes Escherichia coli S88   1 1
No Yes Escherichia coli IAI1   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli ATCC 8739   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SMS-3-5   1 1
No Yes Escherichia coli SE15   1 1
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli APEC O1   1 1
No Yes Escherichia coli O103:H2 str. 12009   1 1
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli 536   1 1
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli O55:H7 str. RM12579   1 1
No Yes Escherichia coli O55:H7 str. CB9615   1 1
No Yes Escherichia coli O26:H11 str. 11368   1 1
No Yes Escherichia coli CFT073   1 1
No Yes Escherichia coli O111:H- str. 11128   1 1
No Yes Escherichia coli O127:H6 str. E2348/69   1 1
No Yes Escherichia coli O157:H7 str. TW14359   1 1
No Yes Escherichia coli O157:H7 str. EC4115   1 1
No Yes Escherichia coli O157:H7 str. Sakai   1 1
No Yes Escherichia coli O157:H7 str. EDL933   1 1
No Yes Escherichia coli str. K-12 substr. MDS42   1 1
No Yes Escherichia coli BW2952   1 1
No Yes Escherichia coli str. K-12 substr. MG1655   1 1
No Yes Escherichia coli str. K-12 substr. W3110   1 1
No Yes Escherichia coli str. K-12 substr. DH10B   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Enterobacter cloacae SCF1   1 1
No Yes Enterobacter cloacae EcWSU1   1 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   1 1
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   6 6
No Yes Combined (meta-genome)   4 4
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   8 8
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   2 2
No Yes Fungus garden combined (combined) (meta-genome)   5 5
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   6 6
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   8 8
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   21645 21645
No Yes STRING v9.0.5 (STRING)   94 94
No Yes Uniprot 2018_03 genome   961 961
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   6 6
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   13 13
No Yes TargetDB (Targets)   3 3
No Yes The Salmonella enterica Pan-genome (meta-genome)   30 30

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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