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DNA-binding domain of EIN3-like family domain assignments
in
PDB chains (SCOP 1.75)

Assignment details

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PDB chains (SCOP 1.75) (PDB) has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
1wijA   1.46e-87   0.000000331   12-132   1wij A:  

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Select to display   Genome       Domains   Proteins
No Yes ALL   2235 2235
No Yes Selaginella moellendorffii   10 10
No Yes Picea abies Norway spruce 3 3
No Yes Eucalyptus grandis v201 Rose gum 5 5
No Yes Theobroma cacao B97-61/B2 v1 Cacao 3 3
No Yes Gossypium raimondii v221   15 15
No Yes Citrus clementina v165   12 12
No Yes Citrus sinensis v154 Sweet orange 19 19
No Yes Thellungiella halophila v173   6 6
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 7 7
No Yes Capsella rubella v183   6 6
No Yes Arabidopsis lyrata Lyrate rockcress 6 6
No Yes Arabidopsis thaliana 10 Thale cress 6 6
No Yes Carica papaya Papaya 3 3
No Yes Medicago truncatula Barrel medic 8 8
No Yes Phaseolus vulgaris v186 French bean 7 7
No Yes Glycine max v109 Soybean 13 13
No Yes Cucumis sativus v122 Cucumber 9 9
No Yes Fragaria vesca Wild strawberry 5 5
No Yes Malus domestica v196 Apple 13 13
No Yes Prunus persica v139 Peach 4 4
No Yes Linum usitatissimum v200 Flax 4 4
No Yes Manihot esculenta v147 Cassava 2 2
No Yes Populus trichocarpa v156 Black cottonwood 8 8
No Yes Vitis vinifera Wine grape 2 2
No Yes Mimulus guttatus v140 Spotted monkey flower 8 8
No Yes Solanum lycopersicum v.2.3 Tomato 9 9
No Yes Solanum tuberosum Potato 11 11
No Yes Actinidia chinensis Hongyang   8 8
No Yes Aquilegia coerulea v195   5 5
No Yes Triticum urartu 22   4 4
No Yes Triticum aestivum 22 Bread wheat 13 13
No Yes Aegilops tauschii 22   4 4
No Yes Brachypodium distachyon Stiff brome 6 6
No Yes Oryza barthii 22 African wild rice 4 4
No Yes Oryza meridionalis 22   6 6
No Yes Oryza glumaepatula 22   5 5
No Yes Oryza glaberrima African rice 4 4
No Yes Oryza punctata 22   7 7
No Yes Oryza nivara 22   6 6
No Yes Oryza brachyantha 22 Malo sina 4 4
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 9 9
No Yes Oryza sativa v193 Rice 9 9
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 7 7
No Yes Panicum virgatum v202 Switchgrass 14 14
No Yes Setaria italica v164 Foxtail millet 9 9
No Yes Zea mays subsp. mays Maize 9 9
No Yes Zea mays v181 Maize 9 9
No Yes Sorghum bicolor Sorghum 7 7
No Yes Musa balbisiana Balbis banana 19 19
No Yes Musa acuminata 22 Wild Malaysian banana 16 16
No Yes Amborella trichopoda 22   2 2
No Yes Physcomitrella patens   2 2
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 3 3
No Yes Hordeum vulgare 22 Domesticated barley 10 10
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 7 7
No Yes Lotus japonicus (Early assembly)   6 6
No Yes Malus x domestica (Duplicate) Apple 13 13
No Yes Ricinus communis (Early assembly) Castor bean 4 4
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   3 3
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 9 9
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 9 9
No Yes Phoenix dactylifera (Early draft) Date palm 4 4
No Yes Arabidopsis thaliana 10 Thale cress 6 6
No Yes NCBI 2017_08 genome   795 792
No Yes STRING v9.0.5 (STRING)   49 49
No Yes Uniprot 2018_03 genome   734 734
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   3 3
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   7 7
No Yes TargetDB (Targets)   1 1

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