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XseB-like family domain assignments
in
all bacterial genomes

Assignment details

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13 selected genomes have 13 significant domains in 13 proteins.


Bordetella petrii DSM 12804 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|163857374|ref|YP_001631672.1|   5.62e-20   0.0000577   17-79   1vp7 B:  

Bordetella avium 197N has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|187478669|ref|YP_786693.1|   1.16e-20   0.0000451   7-70   1vp7 B:  

Bordetella pertussis Tohama I has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|33593756|ref|NP_881400.1|   4.45e-20   0.000027   17-80   1vp7 B:  

Bordetella parapertussis 12822 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|33597050|ref|NP_884693.1|   4.45e-20   0.000027   17-80   1vp7 B:  

Bordetella bronchiseptica RB50 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|33600895|ref|NP_888455.1|   4.45e-20   0.000027   17-80   1vp7 B:  

Achromobacter xylosoxidans A8 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|311105028|ref|YP_003977881.1|   1.57e-19   0.0000492   17-80   1vp7 B:  

Achromobacter xylosoxidans has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|528982060|ref|YP_008027377.1|   9.55e-20   0.0000413   17-80   1vp7 B:  

Bordetella pertussis CS has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|384205044|ref|YP_005590783.1|   4.45e-20   0.000027   17-80   1vp7 B:  

Bordetella parapertussis 18323 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|408414644|ref|YP_006625351.1|   4.45e-20   0.000027   17-80   1vp7 B:  

Bordetella parapertussis Bpp5 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|410472459|ref|YP_006895740.1|   4.45e-20   0.000027   17-80   1vp7 B:  

Bordetella bronchiseptica MO149 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|410420907|ref|YP_006901356.1|   4.45e-20   0.000027   17-80   1vp7 B:  

Bordetella bronchiseptica 253 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|412338918|ref|YP_006967673.1|   4.45e-20   0.000027   17-80   1vp7 B:  

Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|568126833|ref|YP_008923480.1|   9.55e-20   0.0000413   17-80   1vp7 B:  

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Select to display   Genome       Domains   Proteins
No Yes ALL   927 927
No Yes Bordetella petrii DSM 12804   1 1
No Yes Bordetella avium 197N   1 1
No Yes Bordetella pertussis Tohama I   1 1
No Yes Bordetella parapertussis 12822   1 1
No Yes Bordetella bronchiseptica RB50   1 1
No Yes Achromobacter xylosoxidans A8   1 1
No Yes Achromobacter xylosoxidans   1 1
No Yes Bordetella pertussis CS   1 1
No Yes Bordetella parapertussis 18323   1 1
No Yes Bordetella parapertussis Bpp5   1 1
No Yes Bordetella bronchiseptica MO149   1 1
No Yes Bordetella bronchiseptica 253   1 1
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   800 800
No Yes STRING v9.0.5 (STRING)   5 5
No Yes Uniprot 2018_03 genome   78 78
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   6 6
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   18 18
No Yes TargetDB (Targets)   1 1

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