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  Home > Genomes > EspA/CesA-like domains in all bacterial and archaeal genomes


EspA/CesA-like superfamily domain assignments
in
all bacterial and archaeal genomes

Network of domain occurrence in all genomes

Assignment details

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25 selected genomes have 42 significant domains in 36 proteins.

Showing genomes 1 to 25 of 73
  1 2 3   Next Last

Chromobacterium violaceum ATCC 12472 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|34498034|ref|NP_902249.1|   9.42e-48   27-118,220-282   EspA-like  
gi|34498035|ref|NP_902250.1|   6.54e-57   29-183   EspA-like  
gi|34498037|ref|NP_902252.1|   2.25e-51   27-118,197-259   EspA-like  
gi|34498038|ref|NP_902253.1|   5.75e-57   28-181   EspA-like  

Shewanella violacea DSS12 has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|294141026|ref|YP_003557004.1|   3.66e-26   129-169,206-268   EspA-like  
  9.15e-25   27-116   EspA-like  
gi|294141027|ref|YP_003557005.1|   1.83e-50   26-188   EspA-like  

Edwardsiella ictaluri 93-146 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|238918886|ref|YP_002932400.1|   2.22e-47   28-195   EspA-like  

Edwardsiella tarda EIB202 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|269138228|ref|YP_003294928.1|   6.8e-55   28-195   EspA-like  

Sodalis glossinidius str. 'morsitans' has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|85059264|ref|YP_454966.1|   3.66e-49   29-190   EspA-like  
 
Weak hits:
gi|85059263|ref|YP_454965.1|   0.0366   3-53   EspA chaperone CesA  

Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|238897388|ref|YP_002923065.1|   0.00000000194   277-417   EspA-like  

Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|224584091|ref|YP_002637889.1|   2.25e-54   30-192   EspA-like  

Citrobacter rodentium ICC168 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|283786625|ref|YP_003366490.1|   4.71e-53   32-188   EspA-like  
gi|283786655|ref|YP_003366520.1|   1.54e-40   3-85   EspA chaperone CesA  

Pandoraea pnomenusa 3kgm has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|560146333|ref|YP_008839111.1|   5.75e-16   33-202   EspA-like  
 
Weak hits:
gi|560146332|ref|YP_008839110.1|   0.000251   58-171   EspA-like  

Burkholderia thailandensis MSMB121 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|488602563|ref|YP_007918420.1|   1.12e-52   26-182   EspA-like  
gi|488602934|ref|YP_007918418.1|   3.14e-51   26-114,206-267   EspA-like  

Shewanella baltica BA175 has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|386324855|ref|YP_006020972.1|   2.33e-29   148-169,201-263   EspA-like  
  3.66e-28   28-115   EspA-like  
gi|386324856|ref|YP_006020973.1|   2.62e-60   28-188   EspA-like  
 
Weak hits:
gi|386324857|ref|YP_006020974.1|   0.0173   19-65   EspA chaperone CesA  

Shewanella baltica OS678 has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|378708575|ref|YP_005273469.1|   2.62e-60   28-188   EspA-like  
gi|378708576|ref|YP_005273470.1|   8.63e-29   145-169,201-263   EspA-like  
  4.45e-27   28-115   EspA-like  

Shewanella baltica OS117 has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|386340930|ref|YP_006037296.1|   2.62e-60   28-188   EspA-like  
gi|386340931|ref|YP_006037297.1|   2.33e-29   149-169,201-263   EspA-like  
  1.07e-27   28-115   EspA-like  
 
Weak hits:
gi|386340929|ref|YP_006037295.1|   0.0157   19-65   EspA chaperone CesA  

Shewanella baltica OS195 has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|160875364|ref|YP_001554680.1|   2.62e-60   28-188   EspA-like  
gi|160875365|ref|YP_001554681.1|   8.63e-29   145-169,201-263   EspA-like  
  4.45e-27   28-115   EspA-like  

Shewanella baltica OS155 has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|126174173|ref|YP_001050322.1|   2.62e-60   28-188   EspA-like  
gi|126174174|ref|YP_001050323.1|   2.33e-29   149-169,201-263   EspA-like  
  1.07e-27   28-115   EspA-like  
 
Weak hits:
gi|126174172|ref|YP_001050321.1|   0.0157   19-65   EspA chaperone CesA  

Edwardsiella tarda C07-087 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|470462017|ref|YP_007628328.1|   6.8e-55   28-195   EspA-like  

Edwardsiella tarda FL6-60 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|387866958|ref|YP_005698427.1|   6.8e-55   28-195   EspA-like  

Yersinia enterocolitica subsp. palearctica 105.5R(r) has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|332159940|ref|YP_004296517.1|   3.14e-53   33-190   EspA-like  

Yersinia enterocolitica subsp. palearctica Y11 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|386310967|ref|YP_006007023.1|   3.14e-53   33-190   EspA-like  

Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|161503507|ref|YP_001570619.1|   1.05e-49   32-194   EspA-like  
 
Weak hits:
gi|161504568|ref|YP_001571680.1|   0.0222   17-66   EspA chaperone CesA  

Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|526220078|ref|YP_008265597.1|   5.75e-54   30-192   EspA-like  

Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|452120430|ref|YP_007470678.1|   4.71e-54   30-192   EspA-like  

Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|194734193|ref|YP_002114411.1|   2.09e-53   30-192   EspA-like  

Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|525857521|ref|YP_008260588.1|   2.62e-51   30-192   EspA-like  

Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|207857096|ref|YP_002243747.1|   5.75e-54   30-192   EspA-like  

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Showing genomes 1 to 25 of 73

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Select to display   Genome       Domains   Proteins
No Yes ALL   12020 12020
No Yes Chromobacterium violaceum ATCC 12472   4 4
No Yes Shewanella violacea DSS12   3 2
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Edwardsiella tarda EIB202   1 1
No Yes Sodalis glossinidius str. 'morsitans'   1 1
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   1 1
No Yes Citrobacter rodentium ICC168   2 2
No Yes Pandoraea pnomenusa 3kgm   1 1
No Yes Burkholderia thailandensis MSMB121   2 2
No Yes Shewanella baltica BA175   3 2
No Yes Shewanella baltica OS678   3 2
No Yes Shewanella baltica OS117   3 2
No Yes Shewanella baltica OS195   3 2
No Yes Shewanella baltica OS155   3 2
No Yes Edwardsiella tarda C07-087   1 1
No Yes Edwardsiella tarda FL6-60   1 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   1 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   1 1
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   1 1
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   1 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   1 1
No Yes Escherichia coli Xuzhou21   2 2
No Yes Escherichia coli O103:H2 str. 12009   2 2
No Yes Escherichia coli O55:H7 str. RM12579   2 2
No Yes Escherichia coli O55:H7 str. CB9615   2 2
No Yes Escherichia coli O26:H11 str. 11368   2 2
No Yes Escherichia coli O111:H- str. 11128   2 2
No Yes Escherichia coli O127:H6 str. E2348/69   2 2
No Yes Escherichia coli O157:H7 str. TW14359   2 2
No Yes Escherichia coli O157:H7 str. EC4115   2 2
No Yes Escherichia coli O157:H7 str. Sakai   2 2
No Yes Escherichia coli O157:H7 str. EDL933   2 2
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   11309 11251
No Yes STRING v9.0.5 (STRING)   46 44
No Yes Uniprot 2018_03 genome   469 443
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   6 6
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   9 9
No Yes TargetDB (Targets)   2 2
No Yes The Salmonella enterica Pan-genome (meta-genome)   31 31

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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