Select to display Genome Domains Proteins
No Yes ALL 121293 121293
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 1 1
No Yes Echinops telfairi 76 Small Madagascar hedgehog 1 1
No Yes Poecilia formosa 76 Amazon molly 1 1
No Yes Lucilia cuprina Australian sheep blowfly 1 1
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 1 1
No Yes Hymenolepis microstoma 1 1
No Yes Taenia solium Pork tapeworm 1 1
No Yes Proterospongia sp. ATCC 50818 1 1
No Yes Sphaeroforma arctica JP610 43 16
No Yes Aspergillus zonatus v1.0 10 2
No Yes Dictyostelium discoideum 112 4
No Yes Dictyostelium purpureum 99 5
No Yes Eucalyptus grandis v201 Rose gum 1 1
No Yes Thellungiella halophila v173 1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 1 1
No Yes Capsella rubella v183 1 1
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Carica papaya Papaya 1 1
No Yes Prunus persica v139 Peach 1 1
No Yes Linum usitatissimum v200 Flax 1 1
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Vitis vinifera Wine grape 1 1
No Yes Aquilegia coerulea v195 1 1
No Yes Brachypodium distachyon Stiff brome 1 1
No Yes Phyllostachys heterocycla var. pubescens Kikko-chiku 1 1
No Yes Panicum virgatum v202 Switchgrass 2 2
No Yes Zea mays subsp. mays Maize 1 1
No Yes Zea mays v181 Maize 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 1 1
No Yes Amborella trichopoda 22 1 1
No Yes Physcomitrella patens 1 1
No Yes Thalassiosira pseudonana CCMP1335 24 10
No Yes Emiliania huxleyi CCMP1516 3 1
No Yes Leptolyngbya sp. PCC 7376 7 2
No Yes Pseudanabaena sp. PCC 7367 1 1
No Yes Acaryochloris marina MBIC11017 1 1
No Yes Microcoleus sp. PCC 7113 2 2
No Yes Trichodesmium erythraeum IMS101 21 3
No Yes Geitlerinema sp. PCC 7407 1 1
No Yes Cyanothece sp. PCC 8802 1 1
No Yes Microcystis aeruginosa NIES-843 1 1
No Yes Rivularia sp. PCC 7116 25 7
No Yes Calothrix sp. PCC 7507 5 3
No Yes Anabaena variabilis ATCC 29413 1 1
No Yes 'Nostoc azollae' 0708 4 1
No Yes Nostoc sp. PCC 7107 3 3
No Yes Nostoc punctiforme PCC 73102 2 2
No Yes Nostoc sp. PCC 7120 10 3
No Yes Nostoc sp. PCC 7524 5 4
No Yes Anabaena sp. 90 1 1
No Yes Conexibacter woesei DSM 14684 11 6
No Yes Ilumatobacter coccineus 75 3
No Yes Thermobispora bispora DSM 43833 1 1
No Yes Nakamurella multipartita DSM 44233 1 1
No Yes Frankia symbiont of Datisca glomerata 1 1
No Yes Kitasatospora setae KM-6054 2 2
No Yes Streptomyces bingchenggensis BCW-1 2 2
No Yes Streptomyces violaceusniger Tu 4113 1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488 1 1
No Yes Streptomyces scabiei 87.22 1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008 1 1
No Yes Actinosynnema mirum DSM 43827 53 21
No Yes Saccharomonospora viridis DSM 43017 1 1
No Yes Pseudonocardia dioxanivorans CB1190 2 2
No Yes Saccharopolyspora erythraea NRRL 2338 2 1
No Yes Amycolatopsis mediterranei U32 7 4
No Yes Kribbella flavida DSM 17836 1 1
No Yes Gordonia sp. KTR9 1 1
No Yes Rhodococcus erythropolis PR4 1 1
No Yes Corynebacterium ulcerans 0102 8 2
No Yes Corynebacterium urealyticum DSM 7109 1 1
No Yes Corynebacterium pseudotuberculosis 316 3 1
No Yes Corynebacterium diphtheriae NCTC 13129 4 3
No Yes Isoptericola variabilis 225 1 1
No Yes Cellulomonas fimi ATCC 484 1 1
No Yes [Cellvibrio] gilvus ATCC 13127 1 1
No Yes Arthrobacter aurescens TC1 1 1
No Yes Arthrobacter arilaitensis Re117 3 2
No Yes Arthrobacter sp. Rue61a 1 1
No Yes Arthrobacter sp. FB24 2 2
No Yes Renibacterium salmoninarum ATCC 33209 9 2
No Yes Bifidobacterium dentium Bd1 1 1
No Yes Bifidobacterium bifidum S17 1 1
No Yes Arcanobacterium haemolyticum DSM 20595 1 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270 6 6
No Yes Anaerolinea thermophila UNI-1 1 1
No Yes Herpetosiphon aurantiacus DSM 785 17 1
No Yes Roseiflexus sp. RS-1 24 4
No Yes Roseiflexus castenholzii DSM 13941 29 4
No Yes Chloroflexus sp. MS-G 41 4
No Yes Chloroflexus sp. Y-400-fl 49 3
No Yes Chloroflexus aggregans DSM 9485 51 3
No Yes Chloroflexus aurantiacus J-10-fl 49 3
No Yes Deinococcus gobiensis I-0 3 3
No Yes Deinococcus deserti VCD115 3 3
No Yes Deinococcus maricopensis DSM 21211 1 1
No Yes Deinococcus geothermalis DSM 11300 3 3
No Yes Deinococcus proteolyticus MRP 1 1
No Yes Deinococcus radiodurans R1 2 2
No Yes Oceanithermus profundus DSM 14977 3 3
No Yes Meiothermus silvanus DSM 9946 2 2
No Yes Meiothermus ruber DSM 1279 2 2
No Yes Thermus sp. CCB_US3_UF1 3 2
No Yes Thermus scotoductus SA-01 2 1
No Yes Thermus thermophilus HB27 1 1
No Yes Anaerococcus prevotii DSM 20548 1 1
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421 1 1
No Yes Faecalibacterium prausnitzii 1 1
No Yes Ruminococcus bromii 1 1
No Yes Ruminococcus albus 7 4 2
No Yes Eubacterium limosum KIST612 3 2
No Yes Filifactor alocis ATCC 35896 2 2
No Yes Clostridium phytofermentans ISDg 1 1
No Yes Coprococcus sp. ART55/1 1 1
No Yes Clostridium perfringens ATCC 13124 1 1
No Yes Clostridium botulinum A str. ATCC 3502 1 1
No Yes Caldicellulosiruptor kronotskyensis 2002 1 1
No Yes Halanaerobium hydrogeniformans 2 2
No Yes Halanaerobium praevalens DSM 2228 1 1
No Yes Carnobacterium sp. 17-4 1 1
No Yes Enterococcus faecalis 62 1 1
No Yes Exiguobacterium sp. MH3 1 1
No Yes Exiguobacterium sibiricum 255-15 1 1
No Yes Paenibacillus sp. JDR-2 1 1
No Yes Listeria welshimeri serovar 6b str. SLCC5334 2 2
No Yes Listeria innocua Clip11262 1 1
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954 3 3
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459 3 3
No Yes Listeria ivanovii subsp. ivanovii PAM 55 2 2
No Yes Lysinibacillus sphaericus C3-41 1 1
No Yes Oceanobacillus iheyensis HTE831 1 1
No Yes Macrococcus caseolyticus JCSC5402 1 1
No Yes Staphylococcus pseudintermedius HKU10-03 7 2
No Yes Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 1 1
No Yes Staphylococcus lugdunensis HKU09-01 2 1
No Yes Staphylococcus haemolyticus JCSC1435 2 1
No Yes Staphylococcus epidermidis RP62A 2 1
No Yes Staphylococcus aureus subsp. aureus JH1 10 3
No Yes Staphylococcus aureus 10 3
No Yes Gemmatimonas aurantiaca T-27 2 1
No Yes Melioribacter roseus P3M 2 1
No Yes Chlorobium tepidum TLS 1 1
No Yes Chloroherpeton thalassium ATCC 35110 1 1
No Yes Haliscomenobacter hydrossis DSM 1100 22 5
No Yes Saprospira grandis str. Lewin 2 2
No Yes Niastella koreensis GR20-10 1 1
No Yes Chitinophaga pinensis DSM 2588 1 1
No Yes Belliella baltica DSM 15883 2 2
No Yes Cyclobacterium marinum DSM 745 2 2
No Yes Marivirga tractuosa DSM 4126 2 2
No Yes Fibrella aestuarina 22 6
No Yes Leadbetterella byssophila DSM 17132 1 1
No Yes Dyadobacter fermentans DSM 18053 3 3
No Yes Cytophaga hutchinsonii ATCC 33406 2 2
No Yes Spirosoma linguale DSM 74 24 8
No Yes Runella slithyformis DSM 19594 23 7
No Yes Bacteroides sp. CF50 1 1
No Yes Prevotella melaninogenica ATCC 25845 1 1
No Yes Pedobacter saltans DSM 12145 1 1
No Yes Pedobacter heparinus DSM 2366 1 1
No Yes Fluviicola taffensis DSM 16823 1 1
No Yes Owenweeksia hongkongensis DSM 17368 1 1
No Yes Zunongwangia profunda SM-A87 1 1
No Yes Croceibacter atlanticus HTCC2559 32 2
No Yes Cellulophaga algicola DSM 14237 1 1
No Yes Flavobacteriaceae bacterium 3519-10 1 1
No Yes Capnocytophaga ochracea DSM 7271 1 1
No Yes Weeksella virosa DSM 16922 1 1
No Yes Flavobacterium columnare ATCC 49512 1 1
No Yes Flavobacterium johnsoniae UW101 1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85 1 1
No Yes Isosphaera pallida ATCC 43644 32 6
No Yes Planctomyces brasiliensis DSM 5305 1 1
No Yes Rhodopirellula baltica SH 1 27 10
No Yes Pirellula staleyi DSM 6068 12 7
No Yes Coraliomargarita akajimensis DSM 45221 2 2
No Yes Opitutus terrae PB90-1 1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' 1 1
No Yes Marinitoga piezophila KA3 1 1
No Yes Mesotoga prima MesG1.Ag.4.2 1 1
No Yes Thermovibrio ammonificans HB-1 1 1
No Yes Dictyoglomus turgidum DSM 6724 1 1
No Yes Dictyoglomus thermophilum H-6-12 1 1
No Yes Candidatus Solibacter usitatus Ellin6076 4 4
No Yes Granulicella tundricola MP5ACTX9 1 1
No Yes Candidatus Koribacter versatilis Ellin345 2 2
No Yes candidate division WWE3 bacterium RAAC2_WWE3_1 1 1
No Yes Nitratifractor salsuginis DSM 16511 23 5
No Yes Sulfurimonas denitrificans DSM 1251 1 1
No Yes Sulfurovum sp. NBC37-1 1 1
No Yes Desulfurivibrio alkaliphilus AHT2 2 2
No Yes Desulfatibacillum alkenivorans AK-01 2 2
No Yes Desulfococcus oleovorans Hxd3 3 2
No Yes Desulfovibrio vulgaris subsp. vulgaris DP4 2 2
No Yes Geobacter daltonii FRC-32 1 1
No Yes Geobacter sp. M21 2 2
No Yes Geobacter uraniireducens Rf4 1 1
No Yes Geobacter bemidjiensis Bem 2 2
No Yes Geobacter sulfurreducens KN400 1 1
No Yes Geobacter metallireducens GS-15 9 2
No Yes Haliangium ochraceum DSM 14365 1 1
No Yes Sorangium cellulosum 'So ce 56' 4 2
No Yes Stigmatella aurantiaca DW4/3-1 1 1
No Yes Corallococcus coralloides DSM 2259 1 1
No Yes Myxococcus xanthus DK 1622 1 1
No Yes Azoarcus sp. KH32C 1 1
No Yes Burkholderia xenovorans LB400 1 1
No Yes Cupriavidus metallidurans CH34 2 2
No Yes Burkholderia sp. RPE64 1 1
No Yes Burkholderia sp. CCGE1002 1 1
No Yes Verminephrobacter eiseniae EF01-2 2 2
No Yes Ramlibacter tataouinensis TTB310 1 1
No Yes Delftia sp. Cs1-4 1 1
No Yes Delftia acidovorans SPH-1 2 2
No Yes Polaromonas sp. JS666 1 1
No Yes Polaromonas naphthalenivorans CJ2 1 1
No Yes Variovorax paradoxus S110 1 1
No Yes Janthinobacterium sp. Marseille 2 1
No Yes Advenella kashmirensis WT001 1 1
No Yes Taylorella asinigenitalis MCE3 1 1
No Yes Taylorella equigenitalis MCE9 1 1
No Yes Nitrosomonas sp. Is79A3 1 1
No Yes Sideroxydans lithotrophicus ES-1 1 1
No Yes Methylotenera versatilis 301 1 1
No Yes Methylovorus sp. MP688 1 1
No Yes Methylovorus glucosetrophus SIP3-4 1 1
No Yes Methylobacillus flagellatus KT 4 2
No Yes Brevundimonas subvibrioides ATCC 15264 2 2
No Yes Caulobacter sp. K31 1 1
No Yes Phenylobacterium zucineum HLK1 1 1
No Yes Sphingopyxis alaskensis RB2256 1 1
No Yes Dinoroseobacter shibae DFL 12 7 2
No Yes Rhodobacter sphaeroides ATCC 17029 1 1
No Yes Methylobacterium extorquens AM1 1 1
No Yes Sinorhizobium meliloti AK83 1 1
No Yes Mesorhizobium sp. BNC1 4 4
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271 1 1
No Yes Bradyrhizobium japonicum USDA 110 1 1
No Yes Methylocystis sp. SC2 1 1
No Yes Saccharophagus degradans 2-40 1 1
No Yes Teredinibacter turnerae T7901 2 2
No Yes Tolumonas auensis DSM 9187 1 1
No Yes Vibrio splendidus LGP32 1 1
No Yes Psychromonas ingrahamii 37 3 3
No Yes Ferrimonas balearica DSM 9799 1 1
No Yes Shewanella pealeana ATCC 700345 1 1
No Yes Shewanella woodyi ATCC 51908 1 1
No Yes Shewanella amazonensis SB2B 1 1
No Yes Shewanella frigidimarina NCIMB 400 1 1
No Yes Pseudoalteromonas sp. SM9913 1 1
No Yes Pseudoalteromonas atlantica T6c 1 1
No Yes Glaciecola sp. 4H-3-7+YE-5 1 1
No Yes Chromohalobacter salexigens DSM 3043 1 1
No Yes Halomonas elongata DSM 2581 1 1
No Yes Dichelobacter nodosus VCS1703A 1 1
No Yes Thiocystis violascens DSM 198 10 1
No Yes Nitrosococcus halophilus Nc4 1 1
No Yes Pectobacterium atrosepticum SCRI1043 1 1
No Yes Pseudomonas syringae pv. tomato str. DC3000 1 1
No Yes Pseudomonas fulva 12-X 1 1
No Yes Pseudomonas protegens Pf-5 1 1
No Yes Pseudomonas aeruginosa UCBPP-PA14 1 1
No Yes Psychrobacter sp. G 1 1
No Yes Psychrobacter arcticus 273-4 1 1
No Yes Psychrobacter cryohalolentis K5 1 1
No Yes Methanocella arvoryzae MRE50 3 3
No Yes Methanosaeta harundinacea 6Ac 3 3
No Yes Methanosaeta thermophila PT 9 3
No Yes Methanosaeta concilii GP6 7 2
No Yes Methanohalobium evestigatum Z-7303 17 3
No Yes Methanococcoides burtonii DSM 6242 4 1
No Yes Methanosarcina acetivorans C2A 1 1
No Yes Methanosarcina mazei Go1 1 1
No Yes Methanosarcina barkeri str. Fusaro 1 1
No Yes Methanohalophilus mahii DSM 5219 2 2
No Yes Methanosphaerula palustris E1-9c 2 2
No Yes Methanospirillum hungatei JF-1 1 1
No Yes Methanoculleus bourgensis MS2 7 3
No Yes Methanoculleus marisnigri JR1 3 2
No Yes Natrinema sp. J7-2 1 1
No Yes Methanococcus maripaludis C5 6 1
No Yes Aciduliprofundum sp. MAR08-339 1 1
No Yes Chroococcidiopsis thermalis PCC 7203 1 1
No Yes Synechococcus sp. JA-2-3B'a(2-13) 1 1
No Yes Synechococcus sp. JA-3-3Ab 1 1
No Yes Synechococcus sp. PCC 7002 1 1
No Yes Crinalium epipsammum PCC 9333 1 1
No Yes Oscillatoria nigro-viridis PCC 7112 20 6
No Yes Oscillatoria acuminata PCC 6304 1 1
No Yes Arthrospira platensis NIES-39 2 1
No Yes Cyanothece sp. PCC 7822 6 4
No Yes Cyanothece sp. PCC 7424 4 2
No Yes Cyanothece sp. PCC 8801 1 1
No Yes Stanieria cyanosphaera PCC 7437 9 2
No Yes Calothrix parietina Calothrix sp. PCC 6303 6 5
No Yes Cylindrospermum stagnale PCC 7417 5 1
No Yes Anabaena cylindrica PCC 7122 8 3
No Yes Adlercreutzia equolifaciens DSM 19450 3 1
No Yes Streptomyces rapamycinicus NRRL 5491 2 2
No Yes Streptomyces davawensis JCM 4913 1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488 1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01 1 1
No Yes Saccharothrix espanaensis DSM 44229 7 4
No Yes Amycolatopsis mediterranei RB 7 4
No Yes Amycolatopsis mediterranei S699 7 4
No Yes Amycolatopsis mediterranei S699 7 4
No Yes Amycolatopsis orientalis HCCB10007 3 2
No Yes Rhodococcus pyridinivorans SB3094 1 1
No Yes Corynebacterium halotolerans YIM 70093 = DSM 44683 1 1
No Yes Corynebacterium ulcerans BR-AD22 10 3
No Yes Corynebacterium ulcerans 809 8 2
No Yes Corynebacterium argentoratense DSM 44202 1 1
No Yes Corynebacterium callunae DSM 20147 1 1
No Yes Corynebacterium pseudotuberculosis P54B96 6 3
No Yes Corynebacterium pseudotuberculosis 267 6 3
No Yes Corynebacterium pseudotuberculosis 1/06-A 2 2
No Yes Corynebacterium pseudotuberculosis 42/02-A 3 2
No Yes Corynebacterium pseudotuberculosis 3/99-5 6 3
No Yes Corynebacterium pseudotuberculosis 31 3 1
No Yes Corynebacterium pseudotuberculosis PAT10 3 2
No Yes Corynebacterium pseudotuberculosis I19 3 2
No Yes Corynebacterium pseudotuberculosis FRC41 6 3
No Yes Corynebacterium pseudotuberculosis C231 6 3
No Yes Corynebacterium pseudotuberculosis 1002 6 3
No Yes Corynebacterium diphtheriae BH8 2 2
No Yes Corynebacterium diphtheriae VA01 4 4
No Yes Corynebacterium diphtheriae HC04 7 4
No Yes Corynebacterium diphtheriae HC03 7 4
No Yes Corynebacterium diphtheriae HC02 3 2
No Yes Corynebacterium diphtheriae HC01 4 3
No Yes Corynebacterium diphtheriae 241 4 3
No Yes Corynebacterium diphtheriae CDCE 8392 1 1
No Yes Corynebacterium diphtheriae PW8 1 1
No Yes Corynebacterium diphtheriae C7 (beta) 1 1
No Yes Corynebacterium diphtheriae 31A 1 1
No Yes Clavibacter michiganensis subsp. sepedonicus 2 2
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 1 1
No Yes Gardnerella vaginalis HMP9231 1 1
No Yes Gardnerella vaginalis ATCC 14019 1 1
No Yes Bifidobacterium longum NCC2705 1 1
No Yes Bifidobacterium longum DJO10A 1 1
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 1 1
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 1 1
No Yes Bifidobacterium longum subsp. longum KACC 91563 1 1
No Yes Bifidobacterium animalis subsp. animalis ATCC 25527 1 1
No Yes Bifidobacterium animalis subsp. lactis ATCC 27673 1 1
No Yes Bifidobacterium asteroides PRL2011 1 1
No Yes Bifidobacterium bifidum PRL2010 1 1
No Yes Bifidobacterium bifidum BGN4 1 1
No Yes Actinomyces odontolyticus ATCC 17982 17 3
No Yes Chthonomonas calidirosea T49 2 2
No Yes Thermus oshimai JL-2 6 5
No Yes Thermus thermophilus HB8 3 3
No Yes [Eubacterium] cylindroides [Eubacterium] cylindroides T2-87 2 2
No Yes Ruminococcus champanellensis 18P13 2 2
No Yes Clostridium acidurici 9a 1 1
No Yes Desulfotomaculum gibsoniae DSM 7213 2 1
No Yes Clostridium difficile BI1 1 1
No Yes Clostridium difficile CD196 1 1
No Yes Coprococcus catus GD/7 2 2
No Yes Clostridium botulinum BKT015925 1 1
No Yes Clostridium botulinum F str. 230613 1 1
No Yes Clostridium botulinum F str. Langeland 1 1
No Yes Clostridium botulinum E3 str. Alaska E43 1 1
No Yes Clostridium botulinum B1 str. Okra 1 1
No Yes Clostridium botulinum Ba4 str. 657 1 1
No Yes Clostridium botulinum A2 str. Kyoto 1 1
No Yes Clostridium botulinum A3 str. Loch Maree 1 1
No Yes Clostridium botulinum A str. Hall 1 1
No Yes Clostridium botulinum A str. ATCC 19397 1 1
No Yes Thermacetogenium phaeum DSM 12270 2 1
No Yes Halobacteroides halobius DSM 5150 1 1
No Yes Enterococcus casseliflavus EC20 1 1
No Yes Lactobacillus rhamnosus ATCC 8530 1 1
No Yes Streptococcus pneumoniae A026 1 1
No Yes Streptococcus pneumoniae ST556 1 1
No Yes Streptococcus pneumoniae TCH8431/19A 1 1
No Yes Streptococcus pneumoniae Taiwan19F-14 1 1
No Yes Streptococcus pneumoniae TIGR4 1 1
No Yes Exiguobacterium antarcticum B7 1 1
No Yes Paenibacillus sp. Y412MC10 1 1
No Yes Listeria monocytogenes EGD sequence 2 2
No Yes Listeria monocytogenes N53-1 1 1
No Yes Listeria monocytogenes La111 1 1
No Yes Listeria monocytogenes serotype 4b str. LL195 3 3
No Yes Listeria monocytogenes 07PF0776 3 3
No Yes Listeria monocytogenes M7 2 2
No Yes Listeria monocytogenes J1-220 2 2
No Yes Listeria monocytogenes J1816 2 2
No Yes Listeria monocytogenes SLCC2376 2 2
No Yes Listeria monocytogenes SLCC5850 2 2
No Yes Listeria monocytogenes ATCC 19117 3 3
No Yes Listeria monocytogenes L312 3 3
No Yes Listeria monocytogenes SLCC2479 3 3
No Yes Listeria monocytogenes SLCC7179 2 2
No Yes Listeria monocytogenes SLCC2540 4 4
No Yes Listeria monocytogenes SLCC2378 3 3
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755 4 4
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372 3 3
No Yes Listeria monocytogenes serotype 7 str. SLCC2482 4 4
No Yes Listeria monocytogenes 08-5578 2 2
No Yes Listeria monocytogenes 08-5923 2 2
No Yes Listeria monocytogenes L99 2 2
No Yes Listeria monocytogenes HCC23 2 2
No Yes Listeria monocytogenes 10403S 2 2
No Yes Listeria monocytogenes J0161 2 2
No Yes Listeria monocytogenes Finland 1998 2 2
No Yes Listeria monocytogenes FSL R2-561 3 3
No Yes Listeria monocytogenes serotype 4b str. F2365 3 3
No Yes Listeria monocytogenes EGD-e 3 3
No Yes Bacillus thuringiensis serovar chinensis CT-43 1 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056 1 1
No Yes Staphylococcus aureus subsp. aureus MSHR1132 10 3
No Yes Staphylococcus pseudintermedius ED99 5 2
No Yes Staphylococcus pasteuri SP1 1 1
No Yes Staphylococcus lugdunensis N920143 2 1
No Yes Staphylococcus warneri SG1 4 2
No Yes Staphylococcus epidermidis ATCC 12228 6 2
No Yes Staphylococcus aureus CA-347 10 3
No Yes Staphylococcus aureus Bmb9393 10 3
No Yes Staphylococcus aureus M1 10 3
No Yes Staphylococcus aureus 08BA02176 10 3
No Yes Staphylococcus aureus ST228/18412 9 3
No Yes Staphylococcus aureus ST228/18341 10 3
No Yes Staphylococcus aureus ST228/16125 10 3
No Yes Staphylococcus aureus ST228/16035 10 3
No Yes Staphylococcus aureus ST228/15532 10 3
No Yes Staphylococcus aureus ST228/10497 10 3
No Yes Staphylococcus aureus ST228/10388 10 3
No Yes Staphylococcus aureus 04-02981 10 3
No Yes Staphylococcus aureus RF122 3 1
No Yes Staphylococcus aureus subsp. aureus Z172 7 2
No Yes Staphylococcus aureus subsp. aureus 6850 3 1
No Yes Staphylococcus aureus subsp. aureus SA957 10 3
No Yes Staphylococcus aureus subsp. aureus CN1 10 3
No Yes Staphylococcus aureus subsp. aureus SA40 10 3
No Yes Staphylococcus aureus subsp. aureus 11819-97 10 3
No Yes Staphylococcus aureus subsp. aureus M013 10 3
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412 10 3
No Yes Staphylococcus aureus subsp. aureus VC40 7 2
No Yes Staphylococcus aureus subsp. aureus T0131 10 3
No Yes Staphylococcus aureus subsp. aureus LGA251 8 2
No Yes Staphylococcus aureus subsp. aureus ECT-R 2 10 3
No Yes Staphylococcus aureus subsp. aureus JKD6159 10 3
No Yes Staphylococcus aureus subsp. aureus ED133 10 3
No Yes Staphylococcus aureus subsp. aureus ED98 10 3
No Yes Staphylococcus aureus subsp. aureus TW20 10 3
No Yes Staphylococcus aureus subsp. aureus 55/2053 10 3
No Yes Staphylococcus aureus subsp. aureus TCH60 11 3
No Yes Staphylococcus aureus subsp. aureus str. JKD6008 8 2
No Yes Staphylococcus aureus subsp. aureus 71193 10 3
No Yes Staphylococcus aureus subsp. aureus S0385 7 2
No Yes Staphylococcus aureus subsp. aureus str. Newman 10 3
No Yes Staphylococcus aureus subsp. aureus Mu3 10 3
No Yes Staphylococcus aureus subsp. aureus USA300_TCH1516 10 3
No Yes Staphylococcus aureus subsp. aureus USA300_FPR3757 10 3
No Yes Staphylococcus aureus subsp. aureus JH9 10 3
No Yes Staphylococcus aureus subsp. aureus MSSA476 10 3
No Yes Staphylococcus aureus subsp. aureus MRSA252 5 2
No Yes Staphylococcus aureus subsp. aureus MW2 10 3
No Yes Staphylococcus aureus subsp. aureus N315 10 3
No Yes Staphylococcus aureus subsp. aureus Mu50 10 3
No Yes Staphylococcus aureus subsp. aureus COL 10 3
No Yes Staphylococcus aureus subsp. aureus NCTC 8325 7 2
No Yes Echinicola vietnamensis DSM 17526 1 1
No Yes Emticicia oligotrophica DSM 17448 3 1
No Yes Nonlabens dokdonensis DSW-6 20 1
No Yes Psychroflexus torquis ATCC 700755 11 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85 1 1
No Yes Singulisphaera acidiphila DSM 18658 12 4
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' 1 1
No Yes Desulfovibrio vulgaris RCH1 1 1
No Yes Desulfovibrio vulgaris str. 'Miyazaki F' 1 1
No Yes Desulfovibrio vulgaris str. Hildenborough 1 1
No Yes Geobacter sp. M18 2 2
No Yes Geobacter sulfurreducens PCA 1 1
No Yes Myxococcus stipitatus DSM 14675 1 1
No Yes Ralstonia solanacearum FQY_4 1 1
No Yes Ralstonia solanacearum Po82 1 1
No Yes Ralstonia solanacearum CMR15 2 2
No Yes Ralstonia solanacearum GMI1000 1 1
No Yes Burkholderia cenocepacia J2315 1 1
No Yes Variovorax paradoxus B4 1 1
No Yes Variovorax paradoxus EPS 1 1
No Yes Taylorella asinigenitalis 14/45 1 1
No Yes Taylorella equigenitalis 14/56 1 1
No Yes Taylorella equigenitalis ATCC 35865 1 1
No Yes Rhodobacter sphaeroides KD131 1 1
No Yes Rhodobacter sphaeroides 2.4.1 1 1
No Yes Sinorhizobium meliloti 2011 1 1
No Yes Sinorhizobium meliloti GR4 1 1
No Yes Sinorhizobium meliloti SM11 1 1
No Yes Sinorhizobium meliloti BL225C 1 1
No Yes Sinorhizobium meliloti 1021 1 1
No Yes Bradyrhizobium oligotrophicum S58 1 1
No Yes Haemophilus influenzae 10810 1 1
No Yes Shewanella sp. W3-18-1 1 1
No Yes Thalassolituus oleivorans MIL-1 1 1
No Yes Pseudomonas denitrificans ATCC 13867 1 1
No Yes Pseudomonas syringae pv. phaseolicola 1448A 1 1
No Yes Pseudomonas protegens CHA0 1 1
No Yes Pseudomonas aeruginosa SCV20265 1 1
No Yes Pseudomonas aeruginosa MTB-1 1 1
No Yes Pseudomonas aeruginosa LES431 1 1
No Yes Pseudomonas aeruginosa RP73 1 1
No Yes Pseudomonas aeruginosa B136-33 1 1
No Yes Pseudomonas aeruginosa PA1R 1 1
No Yes Pseudomonas aeruginosa PA1 1 1
No Yes Pseudomonas aeruginosa DK2 1 1
No Yes Pseudomonas aeruginosa NCGM2.S1 1 1
No Yes Pseudomonas aeruginosa M18 1 1
No Yes Pseudomonas aeruginosa LESB58 1 1
No Yes Pseudomonas aeruginosa PA7 1 1
No Yes Pseudomonas aeruginosa PAO1 1 1
No Yes Acinetobacter junii SH205 2 2
No Yes Methanomethylovorans hollandica DSM 15978 3 2
No Yes Methanolobus psychrophilus R15 4 3
No Yes Methanosarcina mazei Tuc01 1 1
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 1 1
No Yes Natronococcus occultus SP4 1 1
No Yes Natronobacterium gregoryi SP2 1 1
No Yes Methanococcus maripaludis C6 4 2
No Yes Methanococcus maripaludis C7 6 2
No Yes Lotus japonicus (Early assembly) 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 1 1
No Yes Echinops telfairi 69 Small Madagascar hedgehog 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 1_050719N (meta-genome) 1 1
No Yes 2_050719S (meta-genome) 3 3
No Yes 3_050719R (meta-genome) 10 8
No Yes 4_050719Q (meta-genome) 100 55
No Yes 4_Deep_abyss (meta-genome) 1 1
No Yes 5_050719P (meta-genome) 97 45
No Yes 7_Oxygen_minimum_layer (meta-genome) 3 3
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome) 1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome) 1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome) 26 14
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome) 6 4
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome) 8 2
No Yes Bath Hot Springs, planktonic community (meta-genome) 8 7
No Yes Combined (meta-genome) 19 19
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome) 3 3
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome) 1 1
No Yes Dump bottom (Dump bottom) (meta-genome) 101 85
No Yes Dump top (Dump top) (meta-genome) 80 61
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome) 9 8
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome) 9 8
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome) 5 5
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome) 24 22
No Yes Fungus garden combined (combined) (meta-genome) 2 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome) 1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome) 4 4
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes 6 5
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome) 9 8
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome) 8 5
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome) 11 6
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome) 8 7
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome) 10 7
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome) 10 7
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome) 6 4
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome) 11 10
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome) 11 6
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome) 7 3
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome) 3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome) 1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome) 1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) 37 27
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome) 33 18
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome) 11 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome) 2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) 54 24
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome) 45 21
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) 47 27
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome) 18 11
No Yes Human Gut Community Subject 7 (meta-genome) 1 1
No Yes Human Gut Community Subject 8 (meta-genome) 2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome) 12 9
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome) 19 19
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) 19 18
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome) 11 5
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 117 86
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) 44 32
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome) 3 3
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome) 35 26
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome) 32 23
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome) 5 4
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) 13 12
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome) 16 16
No Yes Mouse Gut Community ob1 (meta-genome) 1 1
No Yes NCBI 2017_08 genome 98984 41079
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) 27 24
No Yes simHC - Simulated High Complexity Metagenome (meta-genome) 33 21
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome) 8 8
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome) 8 6
No Yes Sludge/Australian, Phrap Assembly (meta-genome) 55 32
No Yes Sludge/US, Jazz Assembly (meta-genome) 10 4
No Yes Sludge/US, Phrap Assembly (meta-genome) 20 10
No Yes Soil microbial communities from Minnesota Farm (meta-genome) 41 33
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 81 72
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) 46 41
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) 28 26
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome) 40 35
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) 44 41
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) 37 36
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome) 5 5
No Yes STRING v9.0.5 (STRING) 873 325
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome) 4 4
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) 45 40
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome) 17 15
No Yes Uniprot 2018_03 genome 15685 8289
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome) 39 22
No Yes Global Ocean Sampling Expedition (GOS) 152 139
No Yes NCBI plasmid sequences (Plasmids) 50 38
No Yes PDB chains (SCOP 1.75 ) (PDB) 1 1
No Yes Protein Data Bank (all PDB sequenc) 4 4
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ) 19 19
No Yes TargetDB (Targets) 31 17