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  Home > Genomes > DNA topoisomerase II binding protein 1, TopBP1 domains in all genomes


DNA topoisomerase II binding protein 1, TopBP1 family domain assignments
in
all genomes

Assignment details

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25 selected genomes have 25 significant domains in 25 proteins.

Showing genomes 1 to 25 of 110
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Homo sapiens 76_38 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSP00000260810   6.94e-26   0.00000258   347-445   1wf6 A:  
  2.75e-24   0.033   199-302   1wf6 A:  
  9.68e-21   0.031   907-1008   1wf6 A:  
 
Weak hits:
ENSP00000232458   1.16e-23   0.055   189-323   1wf6 A:  
ENSP00000242248   0.000000043   0.043   30-120   1wf6 A:  
ENSP00000258428   9.29e-22   0.059   41-131   1wf6 A:  
ENSP00000260947   6.15e-19   0.052   616-776   1wf6 A:  
ENSP00000267064   0.000000000000445   0.076   137-192,232-267   1wf6 A:  
ENSP00000302919   0.000000000000393   0.076   137-192,232-267   1wf6 A:  
ENSP00000335141   0.0000000374   0.043   30-120   1wf6 A:  
ENSP00000349393   5.63e-21   0.045   620-748   1wf6 A:  
ENSP00000360216   0.00000000000102   0.034   36-123   1wf6 A:  
ENSP00000376457   1.22e-23   0.055   220-354   1wf6 A:  
ENSP00000377091   9.29e-22   0.059   41-131   1wf6 A:  
ENSP00000377591   0.000000000000406   0.076   137-192,232-267   1wf6 A:  
ENSP00000379174   0.0000000449   0.043   30-120   1wf6 A:  
ENSP00000385955   5.63e-21   0.045   620-748   1wf6 A:  
ENSP00000388230   0.00000000164   0.043   30-126   1wf6 A:  
ENSP00000390899   0.00000000393   0.043   30-120   1wf6 A:  
ENSP00000395043   0.00000000523   0.043   30-125   1wf6 A:  
ENSP00000396571   0.00000000932   0.043   30-121   1wf6 A:  
ENSP00000397135   0.00000000393   0.043   30-121   1wf6 A:  
ENSP00000399244   0.00000000327   0.043   30-121   1wf6 A:  
ENSP00000402030   5.63e-21   0.045   620-748   1wf6 A:  
ENSP00000406752   0.000000000000837   0.052   574-679   1wf6 A:  
ENSP00000412259   1.16e-23   0.055   189-323   1wf6 A:  
ENSP00000414025   0.0000000135   0.043   30-121   1wf6 A:  
ENSP00000415876   1.16e-23   0.055   188-322   1wf6 A:  
ENSP00000421179   9.46e-28   0.03   3-128   1wf6 A:  
ENSP00000443160   1.16e-23   0.055   189-323   1wf6 A:  
ENSP00000449396   0.000000000000458   0.076   137-192,232-267   1wf6 A:  
ENSP00000480470   0.000000000000981   0.052   652-757   1wf6 A:  
ENSP00000480814   4.97e-21   0.045   553-681   1wf6 A:  
ENSP00000482293   0.00000000000018   0.052   158-263   1wf6 A:  
ENSP00000483275   0.0000000000000494   0.052   61-166   1wf6 A:  
ENSP00000484288   5.63e-21   0.045   620-748   1wf6 A:  
ENSP00000484464   0.000000000000178   0.052   201-306   1wf6 A:  
ENSP00000484976   0.000000000000202   0.052   220-325   1wf6 A:  

Pan troglodytes 76_2.1.4 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSPTRP00000026557   6.94e-26   0.00000258   347-445   1wf6 A:  
  2.75e-24   0.033   199-302   1wf6 A:  
  1.14e-20   0.023   907-1008   1wf6 A:  
 
Weak hits:
ENSPTRP00000004885   0.00000000000669   0.039   36-123   1wf6 A:  
ENSPTRP00000008650   0.000000000000432   0.076   100-155,195-230   1wf6 A:  
ENSPTRP00000021041   9.29e-22   0.059   41-131   1wf6 A:  
ENSPTRP00000022033   0.000000000000928   0.052   671-776   1wf6 A:  
ENSPTRP00000026898   1.16e-23   0.055   189-323   1wf6 A:  
ENSPTRP00000032685   0.0000000336   0.03   30-120   1wf6 A:  
ENSPTRP00000042757   1.44e-20   0.037   620-748   1wf6 A:  

Pongo abelii 76_2 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSPPYP00000015789   6.94e-26   0.00000258   347-445   1wf6 A:  
  3.53e-24   0.033   198-285   1wf6 A:  
  9.81e-21   0.031   912-1013   1wf6 A:  
 
Weak hits:
ENSPPYP00000002922   0.0000000000048   0.041   35-123   1wf6 A:  
ENSPPYP00000005295   0.000000000000445   0.076   110-165,205-240   1wf6 A:  
ENSPPYP00000005296   0.000000000000366   0.076   109-164,204-239   1wf6 A:  
ENSPPYP00000006314   3.66e-21   0.045   620-746   1wf6 A:  
ENSPPYP00000013486   9.29e-22   0.059   41-131   1wf6 A:  
ENSPPYP00000014687   0.0000000000017   0.043   671-776   1wf6 A:  
ENSPPYP00000015991   4.07e-16   0.055   267-353   1wf6 A:  
ENSPPYP00000019724   0.0000000146   0.032   30-120   1wf6 A:  
ENSPPYP00000020416   7.59e-24   0.087   849-966   1wf6 A:  
ENSPPYP00000023845   0.00000000000124   0.043   527-632   1wf6 A:  

Nomascus leucogenys 76_1.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSNLEP00000004327   6.94e-26   0.00000258   347-445   1wf6 A:  
  2.49e-24   0.033   199-300   1wf6 A:  
  9.16e-21   0.023   912-1014   1wf6 A:  
 
Weak hits:
ENSNLEP00000004297   0.0000000224   0.031   30-121   1wf6 A:  
ENSNLEP00000006789   2.33e-23   0.055   221-354   1wf6 A:  
ENSNLEP00000008789   0.0000000000017   0.043   671-776   1wf6 A:  
ENSNLEP00000009615   6.28e-21   0.045   620-748   1wf6 A:  
ENSNLEP00000016213   0.00000000000669   0.039   36-123   1wf6 A:  
ENSNLEP00000017380   9.42e-22   0.059   53-143   1wf6 A:  
ENSNLEP00000021282   0.000000000000288   0.076   100-155,195-230   1wf6 A:  
ENSNLEP00000021283   0.000000000000275   0.076   100-155,195-230   1wf6 A:  

Papio anubis 76 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSPANP00000006180   5.5e-25   0.00000258   347-445   1wf6 A:  
  2.09e-24   0.032   198-285   1wf6 A:  
  2.77e-23   0.086   60-185   1wf6 A:  
  6.02e-21   0.032   912-1013   1wf6 A:  
 
Weak hits:
ENSPANP00000002983   2.04e-23   0.055   190-323   1wf6 A:  
ENSPANP00000003974   7.2e-22   0.059   30-131   1wf6 A:  
ENSPANP00000005319   0.0000000000017   0.04   671-776   1wf6 A:  
ENSPANP00000006105   7.33e-22   0.059   30-131   1wf6 A:  
ENSPANP00000006842   6.41e-21   0.048   620-748   1wf6 A:  
ENSPANP00000009767   0.00000000000392   0.082   137-192,232-267   1wf6 A:  
ENSPANP00000009812   0.00000000589   0.028   30-123   1wf6 A:  
ENSPANP00000010408   2.18e-23   0.055   221-354   1wf6 A:  
ENSPANP00000010635   0.0000000000017   0.04   666-771   1wf6 A:  
ENSPANP00000020717   0.00000000000567   0.039   36-124   1wf6 A:  

Macaca mulatta 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSMMUP00000000078   6.94e-26   0.00000258   347-445   1wf6 A:  
  2.09e-24   0.032   198-285   1wf6 A:  
  3.93e-23   0.086   60-185   1wf6 A:  
  7.85e-21   0.032   913-1013   1wf6 A:  
 
Weak hits:
ENSMMUP00000003248   0.00000000617   0.044   30-123   1wf6 A:  
ENSMMUP00000003250   0.00000000409   0.044   30-123   1wf6 A:  
ENSMMUP00000007521   7.59e-19   0.043   616-776   1wf6 A:  
ENSMMUP00000008348   4.71e-20   0.073   52-132   1wf6 A:  
ENSMMUP00000010848   0.00000000000224   0.082   137-192,232-267   1wf6 A:  
ENSMMUP00000022390   2.04e-23   0.055   190-323   1wf6 A:  
ENSMMUP00000029592   0.00000000000611   0.039   36-124   1wf6 A:  
ENSMMUP00000038715   2.18e-23   0.055   190-323   1wf6 A:  
ENSMMUP00000038717   2.04e-23   0.055   190-323   1wf6 A:  

Callithrix jacchus 76_3.2.1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSCJAP00000005421   1.96e-25   0.00000316   347-444   1wf6 A:  
  3.4e-24   0.025   198-285   1wf6 A:  
  7.63e-24   0.086   60-187   1wf6 A:  
  5.37e-21   0.029   911-1013   1wf6 A:  
 
Weak hits:
ENSCJAP00000001039   0.0000000000561   0.026   30-120   1wf6 A:  
ENSCJAP00000001044   0.000000000243   0.026   30-120   1wf6 A:  
ENSCJAP00000003397   0.00000000101   0.035   30-121   1wf6 A:  
ENSCJAP00000003914   1.16e-23   0.055   189-322   1wf6 A:  
ENSCJAP00000003929   1.22e-23   0.055   221-354   1wf6 A:  
ENSCJAP00000003934   1.24e-23   0.055   221-354   1wf6 A:  
ENSCJAP00000006490   0.0000000972   0.053   29-119   1wf6 A:  
ENSCJAP00000006704   0.000000000804   0.048   30-120   1wf6 A:  
ENSCJAP00000014663   0.000000000916   0.035   30-120   1wf6 A:  
ENSCJAP00000018498   0.00000000000000131   0.041   55-133   1wf6 A:  
ENSCJAP00000021153   0.000000000000432   0.037   673-778   1wf6 A:  
ENSCJAP00000021277   0.000000000000419   0.076   100-155,195-230   1wf6 A:  
ENSCJAP00000021307   0.000000000000419   0.076   100-155,195-230   1wf6 A:  
ENSCJAP00000021322   0.000000000000393   0.076   100-155,195-230   1wf6 A:  
ENSCJAP00000025361   0.000000000654   0.029   30-119   1wf6 A:  
ENSCJAP00000027029   2.49e-21   0.045   622-748   1wf6 A:  
  0.00000000000422   0.098   841-911   1wf6 A:  
ENSCJAP00000030097   0.00000000000276   0.045   35-122   1wf6 A:  
ENSCJAP00000042593   2.09e-19   0.037   40-132   1wf6 A:  
ENSCJAP00000045896   1.96e-20   0.064   70-150   1wf6 A:  
ENSCJAP00000047484   7.12e-21   0.041   192-325   1wf6 A:  
ENSCJAP00000048625   2.49e-21   0.045   622-748   1wf6 A:  
  0.00000000000422   0.098   841-911   1wf6 A:  
ENSCJAP00000048744   1.16e-23   0.055   190-323   1wf6 A:  

Otolemur garnettii 76_3 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSOGAP00000001875   2.75e-26   0.00000265   346-444   1wf6 A:  
  1.07e-23   0.028   199-299   1wf6 A:  
  2.75e-21   0.043   907-1008   1wf6 A:  
 
Weak hits:
ENSOGAP00000001355   0.00000000000144   0.076   137-192,232-266   1wf6 A:  
ENSOGAP00000003004   2.62e-23   0.049   222-353   1wf6 A:  
ENSOGAP00000006010   0.00000000965   0.04   30-120   1wf6 A:  
ENSOGAP00000008142   0.00000000000135   0.049   667-772   1wf6 A:  
ENSOGAP00000010773   0.0000000000000112   0.06   40-132   1wf6 A:  
ENSOGAP00000011876   6.28e-22   0.059   20-131   1wf6 A:  
ENSOGAP00000013496   0.00000000000102   0.047   36-123   1wf6 A:  
ENSOGAP00000014534   0.00000000000000174   0.067   4-95   1wf6 A:  
ENSOGAP00000016308   4.97e-20   0.039   626-752   1wf6 A:  
ENSOGAP00000022055   6.28e-22   0.059   20-131   1wf6 A:  

Microcebus murinus 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSMICP00000008721   4.06e-26   0.0000031   346-443   1wf6 A:  
  8.07e-24   0.061   60-185   1wf6 A:  
  1.83e-23   0.025   198-285   1wf6 A:  
 
Weak hits:
ENSMICP00000000196   1.7e-20   0.048   624-748   1wf6 A:  
ENSMICP00000009775   0.000000000000798   0.058   36-125   1wf6 A:  
ENSMICP00000010042   0.0000542   0.064   3-37   1wf6 A:  
ENSMICP00000012205   0.000000009   0.094   39-120   1wf6 A:  
ENSMICP00000013068   0.00000064   0.064   69-111   1wf6 A:  
  0.00000174   0.073   569-617   1wf6 A:  
ENSMICP00000013183   0.000000000000484   0.076   137-192,232-266   1wf6 A:  

Rattus norvegicus 76_5.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSRNOP00000013265   3.01e-25   0.00000578   347-444   1wf6 A:  
  1.38e-23   0.079   60-187   1wf6 A:  
  7.07e-23   0.035   198-283   1wf6 A:  
  9.55e-22   0.056   910-1011   1wf6 A:  
 
Weak hits:
ENSRNOP00000009439   3.93e-24   0.069   598-719   1wf6 A:  
ENSRNOP00000018055   1.25e-17   0.045   261-354   1wf6 A:  
ENSRNOP00000018320   0.0000000000278   0.024   32-123   1wf6 A:  
ENSRNOP00000019615   5.23e-20   0.029   626-748   1wf6 A:  
ENSRNOP00000023137   0.0000000000000218   0.072   39-135   1wf6 A:  
ENSRNOP00000028244   0.00000000000105   0.071   137-192,232-267   1wf6 A:  
ENSRNOP00000046380   0.0000000000000236   0.063   11-98   1wf6 A:  
ENSRNOP00000051355   0.0000000000262   0.08   36-123   1wf6 A:  
ENSRNOP00000058649   0.00000000000114   0.071   137-192,232-267   1wf6 A:  
ENSRNOP00000059938   1.07e-17   0.045   230-323   1wf6 A:  

Mus musculus 76_38 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSMUSP00000035164   8.24e-26   0.00000528   346-444   1wf6 A:  
  1.5e-23   0.079   60-187   1wf6 A:  
  8.77e-23   0.032   202-301   1wf6 A:  
  7.2e-22   0.059   910-1010   1wf6 A:  
 
Weak hits:
ENSMUSP00000020767   0.0000000000327   0.03   33-123   1wf6 A:  
ENSMUSP00000026239   0.0000000000000582   0.038   39-135   1wf6 A:  
ENSMUSP00000026433   0.0000000000011   0.071   137-192,232-267   1wf6 A:  
ENSMUSP00000037000   0.0000000000000183   0.06   11-98   1wf6 A:  
ENSMUSP00000062078   0.0000000000703   0.074   36-119   1wf6 A:  
ENSMUSP00000093130   7.98e-20   0.03   628-748   1wf6 A:  
  0.00000000000145   0.06   844-911   1wf6 A:  
ENSMUSP00000096734   0.00000000000114   0.071   137-192,232-267   1wf6 A:  
ENSMUSP00000100868   0.00000000000126   0.071   137-192,232-267   1wf6 A:  
ENSMUSP00000103933   1.74e-16   0.055   234-323   1wf6 A:  
ENSMUSP00000103935   1.74e-16   0.055   265-354   1wf6 A:  
ENSMUSP00000105463   0.0000000000343   0.03   33-123   1wf6 A:  
ENSMUSP00000107819   0.0000000000671   0.074   36-119   1wf6 A:  
ENSMUSP00000130807   7.98e-20   0.03   628-748   1wf6 A:  
  0.00000000000145   0.06   844-911   1wf6 A:  
ENSMUSP00000131616   0.0000000000000118   0.06   11-98   1wf6 A:  
ENSMUSP00000131698   4.32e-16   0.06   11-98   1wf6 A:  
ENSMUSP00000134786   0.00000276   0.039   103-174   1wf6 A:  
ENSMUSP00000135740   1.74e-16   0.055   234-323   1wf6 A:  

Dipodomys ordii 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSDORP00000009233   5.1e-26   0.00000482   335-437   1wf6 A:  
  6.8e-24   0.023   189-277   1wf6 A:  
  3.27e-23   0.064   52-171   1wf6 A:  
  0.000000000196   0.092   923-989   1wf6 A:  
 
Weak hits:
ENSDORP00000001020   0.00000000000174   0.076   122-177,217-252   1wf6 A:  
ENSDORP00000004583   1.6e-24   0.05   223-355   1wf6 A:  
ENSDORP00000006459   0.00000000376   0.034   15-112   1wf6 A:  
ENSDORP00000007550   0.000000000278   0.045   36-120   1wf6 A:  
ENSDORP00000012758   3.27e-18   0.052   46-125   1wf6 A:  
ENSDORP00000014531   0.00000000000571   0.047   617-722   1wf6 A:  

Ictidomys tridecemlineatus 76_2 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSSTOP00000001637   5.63e-27   0.00000285   348-446   1wf6 A:  
  1.18e-24   0.028   198-286   1wf6 A:  
  1.45e-24   0.054   60-187   1wf6 A:  
 
Weak hits:
ENSSTOP00000002162   2.88e-18   0.064   616-777   1wf6 A:  
ENSSTOP00000002384   0.00000000883   0.03   39-126   1wf6 A:  
ENSSTOP00000003133   0.000000000000432   0.076   103-158,198-233   1wf6 A:  
ENSSTOP00000016381   1.45e-24   0.045   221-354   1wf6 A:  
ENSSTOP00000017639   4.19e-21   0.029   125-226   1wf6 A:  
ENSSTOP00000023308   1.7e-19   0.056   621-748   1wf6 A:  

Heterocephalus glaber v1.7-2 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
HGL_H00000260810   9.29e-26   0.0000037   346-445   1wf6 A:  
  6.67e-24   0.025   199-300   1wf6 A:  
  1.31e-22   0.086   60-180   1wf6 A:  
  1.31e-21   0.029   912-1014   1wf6 A:  
 
Weak hits:
HGL_H00000258428   5.1e-22   0.047   45-130   1wf6 A:  
HGL_H00000260947   0.00000000000174   0.078   619-724   1wf6 A:  
HGL_H00000267064   0.000000000000605   0.076   100-155,195-230   1wf6 A:  
HGL_H00000349393   7.72e-20   0.062   620-748   1wf6 A:  
HGL_H00000360216   0.0000000000196   0.039   36-120   1wf6 A:  
HGL_H00000379174   0.00000000149   0.025   31-122   1wf6 A:  
HGL_H00000384048   5.89e-26   0.064   67-158   1wf6 A:  
  3.14e-24   0.074   706-825   1wf6 A:  
HGL_H00000401910   1.26e-23   0.057   192-323   1wf6 A:  

Oryctolagus cuniculus 76_2 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSOCUP00000010983   6.8e-26   0.00000468   348-445   1wf6 A:  
  1.83e-24   0.022   199-302   1wf6 A:  
  1.55e-23   0.054   60-180   1wf6 A:  
  1.05e-20   0.083   932-1031   1wf6 A:  
 
Weak hits:
ENSOCUP00000002494   0.0000000000687   0.061   18-102   1wf6 A:  
ENSOCUP00000013516   2.62e-21   0.041   621-748   1wf6 A:  
ENSOCUP00000014937   0.00000000000034   0.076   100-155,195-230   1wf6 A:  
ENSOCUP00000020115   0.00000000654   0.023   31-121   1wf6 A:  
ENSOCUP00000023606   2.47e-23   0.052   190-323   1wf6 A:  
ENSOCUP00000026484   0.0032   0.03   2-59   1wf6 A:  

Ochotona princeps 76 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSOPRP00000005925   3.27e-26   0.00000345   342-442   1wf6 A:  
  0.00000000602   0.069   248-284   1wf6 A:  
 
Weak hits:
ENSOPRP00000001230   0.00000000000034   0.076   60-115,155-190   1wf6 A:  
ENSOPRP00000005277   7.2e-20   0.048   624-748   1wf6 A:  
ENSOPRP00000007168   0.0000000000134   0.061   35-120   1wf6 A:  
ENSOPRP00000011223   0.00000000105   0.084   30-87   1wf6 A:  
ENSOPRP00000011333   4.22e-16   0.069   268-353   1wf6 A:  
ENSOPRP00000015582   0.00000000000924   0.068   566-616,706-737   1wf6 A:  

Tupaia belangeri 76 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSTBEP00000013520   8.96e-34   0.00000808   248-280,358-445   1wf6 A:  
  1.1e-19   0.036   910-1008   1wf6 A:  
 
Weak hits:
ENSTBEP00000000460   0.00000000000137   0.076   100-155,195-230   1wf6 A:  
ENSTBEP00000008192   0.00000000000000233   0.057   230-323   1wf6 A:  
  0.00000000000381   0.044   103-199   1wf6 A:  
ENSTBEP00000013429   1.96e-19   0.054   613-773   1wf6 A:  
ENSTBEP00000015431   7.72e-21   0.05   622-748   1wf6 A:  

Sus scrofa 76_10.2 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSSSCP00000027430   5.76e-27   0.00000289   345-446   1wf6 A:  
  1.07e-24   0.037   199-300   1wf6 A:  
  8e-24   0.079   60-180   1wf6 A:  
 
Weak hits:
ENSSSCP00000000404   0.00000000000017   0.076   149-204,244-279   1wf6 A:  
ENSSSCP00000010186   9.42e-21   0.055   621-746   1wf6 A:  
  0.0000000247   0.098   832-910   1wf6 A:  
ENSSSCP00000010222   2.33e-17   0.059   4-92   1wf6 A:  
ENSSSCP00000017127   0.000000000000222   0.051   674-779   1wf6 A:  
ENSSSCP00000017745   0.000000111   0.029   27-114   1wf6 A:  
ENSSSCP00000026875   0.00000000000017   0.076   103-158,198-233   1wf6 A:  

Bos taurus 76_3.1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSBTAP00000000686   1.31e-25   0.00000392   350-447   1wf6 A:  
  1.18e-21   0.042   199-303   1wf6 A:  
  9.68e-21   0.028   909-1011   1wf6 A:  
 
Weak hits:
ENSBTAP00000010260   0.0000000071   0.021   10-104   1wf6 A:  
ENSBTAP00000019562   0.000000000000327   0.076   101-156,196-231   1wf6 A:  
ENSBTAP00000021092   3.4e-21   0.045   620-748   1wf6 A:  
ENSBTAP00000032606   1.13e-22   0.055   223-354   1wf6 A:  
ENSBTAP00000045022   1.6e-19   0.044   611-772   1wf6 A:  
ENSBTAP00000053649   1.44e-16   0.059   3-79   1wf6 A:  

Ovis aries 76_3.1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSOARP00000009219   2.49e-25   0.00000435   350-446   1wf6 A:  
  6.94e-22   0.042   199-303   1wf6 A:  
  4.32e-21   0.028   909-1011   1wf6 A:  
 
Weak hits:
ENSOARP00000005995   3.4e-21   0.047   620-745   1wf6 A:  
ENSOARP00000010661   0.000000000000449   0.076   141-196,236-271   1wf6 A:  
ENSOARP00000010667   0.000000000000542   0.076   130-185,225-260   1wf6 A:  
ENSOARP00000018109   0.0015   0.039   50-119   1wf6 A:  
ENSOARP00000020704   0.00000000000222   0.047   672-780   1wf6 A:  
ENSOARP00000022285   9.74e-23   0.052   223-354   1wf6 A:  

Vicugna pacos 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSVPAP00000002749   3.53e-26   0.00000364   340-440   1wf6 A:  
  4.32e-24   0.023   194-295   1wf6 A:  
  7.2e-21   0.031   903-1005   1wf6 A:  
  0.000000000000131   0.061   60-175   1wf6 A:  
 
Weak hits:
ENSVPAP00000002099   3.14e-20   0.037   620-740   1wf6 A:  
ENSVPAP00000003965   1.57e-20   0.051   517-678   1wf6 A:  
ENSVPAP00000005478   0.00000000000142   0.046   94-186   1wf6 A:  
ENSVPAP00000006790   0.0000000000000393   0.076   104-155,195-230   1wf6 A:  

Mustela putorius furo 76_1.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSMPUP00000009679   2.75e-26   0.00000276   345-446   1wf6 A:  
  1.7e-23   0.04   199-300   1wf6 A:  
  5.56e-23   0.086   60-187   1wf6 A:  
  1.09e-20   0.029   898-1000   1wf6 A:  
 
Weak hits:
ENSMPUP00000001280   0.000000000000353   0.076   137-192,232-267   1wf6 A:  
ENSMPUP00000007758   9.95e-19   0.054   607-766   1wf6 A:  
ENSMPUP00000017064   9.01e-23   0.058   220-354   1wf6 A:  
ENSMPUP00000018556   3.79e-21   0.036   623-748   1wf6 A:  

Ailuropoda melanoleuca 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSAMEP00000000427   1.57e-25   0.00000298   345-446   1wf6 A:  
  1.83e-23   0.04   199-300   1wf6 A:  
  6.22e-23   0.079   60-181   1wf6 A:  
  1.13e-20   0.029   900-1002   1wf6 A:  
 
Weak hits:
ENSAMEP00000001140   1.74e-22   0.043   221-354   1wf6 A:  
ENSAMEP00000001144   1.74e-22   0.043   190-323   1wf6 A:  
ENSAMEP00000003794   0.000000000000393   0.076   103-158,198-233   1wf6 A:  
ENSAMEP00000004039   0.000000000000353   0.06   630-735   1wf6 A:  
ENSAMEP00000018533   0.0235   0.042   2-59   1wf6 A:  
ENSAMEP00000020739   8.24e-21   0.036   627-753   1wf6 A:  

Canis familiaris 76_3.1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSCAFP00000009662   1.05e-25   0.00000334   345-445   1wf6 A:  
  6.28e-24   0.04   199-301   1wf6 A:  
  2.62e-23   0.086   60-187   1wf6 A:  
  7.2e-21   0.028   898-998   1wf6 A:  
 
Weak hits:
ENSCAFP00000000152   0.00000000000034   0.076   130-185,225-260   1wf6 A:  
ENSCAFP00000004275   0.00582   0.033   2-57   1wf6 A:  
ENSCAFP00000009027   2.36e-21   0.036   620-748   1wf6 A:  
ENSCAFP00000012590   0.00000000137   0.06   2-56   1wf6 A:  
ENSCAFP00000021054   0.000000000000183   0.06   622-727   1wf6 A:  
ENSCAFP00000022777   3.05e-22   0.058   223-354   1wf6 A:  
ENSCAFP00000037855   3.2e-22   0.058   192-323   1wf6 A:  

Felis catus 76_6.2 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
ENSFCAP00000004773   3.27e-26   0.00000293   346-446   1wf6 A:  
  1.57e-23   0.021   199-300   1wf6 A:  
  1.96e-20   0.059   899-1000   1wf6 A:  
 
Weak hits:
ENSFCAP00000009076   0.00000000000000122   0.052   1-73   1wf6 A:  
ENSFCAP00000009574   0.00000000000068   0.057   671-776   1wf6 A:  
ENSFCAP00000013790   0.000000000000327   0.076   106-161,201-236   1wf6 A:  
ENSFCAP00000016094   1.03e-20   0.065   190-322   1wf6 A:  
ENSFCAP00000020431   0.00000015   0.057   40-123   1wf6 A:  
ENSFCAP00000023705   2.88e-20   0.041   621-748   1wf6 A:  

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View all assignments containing a DNA topoisomerase II binding protein 1, TopBP1 domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   772 772
No Yes Homo sapiens 76_38 Human 1 1
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 1 1
No Yes Pongo abelii 76_2 Sumatran orangutan 1 1
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 1 1
No Yes Papio anubis 76 Olive baboon 1 1
No Yes Macaca mulatta 76_1 Rhesus monkey 1 1
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 1 1
No Yes Otolemur garnettii 76_3 Small-eared galago 1 1
No Yes Microcebus murinus 76_1 Gray mouse lemur 1 1
No Yes Rattus norvegicus 76_5.0 Norway rat 1 1
No Yes Mus musculus 76_38 House mouse 1 1
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 1 1
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 1 1
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 1 1
No Yes Oryctolagus cuniculus 76_2 Rabbit 1 1
No Yes Ochotona princeps 76 American pika 1 1
No Yes Tupaia belangeri 76 Northern tree shrew 1 1
No Yes Sus scrofa 76_10.2 Pig 1 1
No Yes Bos taurus 76_3.1 Cattle 1 1
No Yes Ovis aries 76_3.1 Sheep 1 1
No Yes Vicugna pacos 76_1 Alpaca 1 1
No Yes Mustela putorius furo 76_1.0 Domestic ferret 1 1
No Yes Ailuropoda melanoleuca 76_1 Giant panda 1 1
No Yes Canis familiaris 76_3.1 Dog 1 1
No Yes Felis catus 76_6.2 Domestic cat 1 1
No Yes Equus caballus 76_2 Horse 1 1
No Yes Myotis lucifugus 76_2.0 Little brown bat 1 1
No Yes Pteropus vampyrus 76_1 Large flying fox 1 1
No Yes Sorex araneus 76_1 European shrew 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 1 1
No Yes Procavia capensis 76_1 Cape rock hyrax 1 1
No Yes Echinops telfairi 76 Small Madagascar hedgehog 1 1
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 1 1
No Yes Macropus eugenii 76_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 2 2
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 2 2
No Yes Ornithorhynchus anatinus 76_5 Platypus 2 2
No Yes Meleagris gallopavo 76_2 Turkey 1 1
No Yes Gallus gallus 76_4 Chicken 1 1
No Yes Anas platyrhynchos 76_1.0 Mallard 1 1
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 1 1
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 1 1
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 1 1
No Yes Anolis carolinensis 76_2.0 Green anole 1 1
No Yes Xenopus laevis African clawed frog 7 7
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 1 1
No Yes Latimeria chalumnae 76_1 Coelacanth 3 3
No Yes Lepisosteus oculatus 76 Spotted gar 2 2
No Yes Takifugu rubripes 76_4 Torafugu 1 1
No Yes Oryzias latipes 76_1 Japanese medaka 1 1
No Yes Poecilia formosa 76 Amazon molly 1 1
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 2 2
No Yes Astyanax mexicanus 76 Mexican tetra 1 1
No Yes Danio rerio 76_9 Zebrafish 1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1 1
No Yes Homo sapiens (NCBI version) Human 1 1
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 1 1
No Yes Homo sapiens 69_37 Human 1 1
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 1 1
No Yes Pongo abelii 69_2 Sumatran orangutan 1 1
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 1 1
No Yes Macaca mulatta 69_1 Rhesus monkey 1 1
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 1 1
No Yes Otolemur garnettii 69_3 Small-eared galago 1 1
No Yes Microcebus murinus 69_1 Gray mouse lemur 1 1
No Yes Rattus norvegicus 69_3.4 Norway rat 1 1
No Yes Mus musculus 69_38 House mouse 1 1
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 1 1
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 1 1
No Yes Oryctolagus cuniculus 69_2 Rabbit 1 1
No Yes Ochotona princeps 69 American pika 1 1
No Yes Tupaia belangeri 69 Northern tree shrew 1 1
No Yes Sus scrofa 69_10.2 Pig 1 1
No Yes Bos taurus 69_3.1 Cattle 1 1
No Yes Vicugna pacos 69_1 Alpaca 1 1
No Yes Mustela putorius furo 69_1.0 Domestic ferret 1 1
No Yes Ailuropoda melanoleuca 69_1 Giant panda 1 1
No Yes Canis familiaris 69_3.1 Dog 1 1
No Yes Felis catus 69 Domestic cat 1 1
No Yes Equus caballus 69_2 Horse 1 1
No Yes Myotis lucifugus 69_2.0 Little brown bat 1 1
No Yes Pteropus vampyrus 69_1 Large flying fox 1 1
No Yes Sorex araneus 69_1 European shrew 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 1 1
No Yes Procavia capensis 69_1 Cape rock hyrax 1 1
No Yes Echinops telfairi 69 Small Madagascar hedgehog 1 1
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 1 1
No Yes Macropus eugenii 69_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 1 1
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 2 2
No Yes Ornithorhynchus anatinus 69_5 Platypus 1 1
No Yes Meleagris gallopavo 69_2 Turkey 1 1
No Yes Gallus gallus 69_2 Chicken 1 1
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 1 1
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 1 1
No Yes Anolis carolinensis 69_2.0 Green anole 1 1
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 1 1
No Yes Latimeria chalumnae 69_1 Coelacanth 1 1
No Yes Takifugu rubripes 69_4 Torafugu 1 1
No Yes Oryzias latipes 69_1 Japanese medaka 1 1
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 1 1
No Yes Danio rerio 69_9 Zebrafish 1 1
No Yes NCBI 2017_08 genome   418 418
No Yes STRING v9.0.5 (STRING)   19 19
No Yes Uniprot 2018_03 genome   165 165
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   1 1
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   3 3
No Yes TargetDB (Targets)   2 2

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.