SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > Genomes > MAST3 pre-PK domain-like domains in all eukaryotic genomes


MAST3 pre-PK domain-like superfamily domain assignments
in
all eukaryotic genomes

Assignment details

(show help)

25 selected genomes have 128 significant domains in 128 proteins.

Showing genomes 1 to 25 of 203
  1 2 3 4 5 6 7 8 9   Next Last

Homo sapiens 76_38 has 13 significant domains in 13 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSP00000251472   1.31e-44   187-287   MAST3 pre-PK domain-like  
ENSP00000261569   1.7e-43   187-287   MAST3 pre-PK domain-like  
ENSP00000262811   5.23e-43   181-281   MAST3 pre-PK domain-like  
ENSP00000354671   8.89e-46   325-425   MAST3 pre-PK domain-like  
ENSP00000361078   3.01e-46   210-310   MAST3 pre-PK domain-like  
ENSP00000361079   0.00000000000000418   8-63   MAST3 pre-PK domain-like  
ENSP00000384099   1.7e-43   202-302   MAST3 pre-PK domain-like  
ENSP00000384313   1.7e-43   192-292   MAST3 pre-PK domain-like  
ENSP00000385727   1.83e-43   381-481   MAST3 pre-PK domain-like  
ENSP00000421739   1.07e-44   192-292   MAST3 pre-PK domain-like  
ENSP00000465187   3.79e-46   9-109   MAST3 pre-PK domain-like  
ENSP00000465395   2.09e-45   141-241   MAST3 pre-PK domain-like  
ENSP00000466470   2.48e-45   183-283   MAST3 pre-PK domain-like  

Pan troglodytes 76_2.1.4 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPTRP00000001186   3.27e-46   325-425   MAST3 pre-PK domain-like  
ENSPTRP00000018003   9.15e-45   187-287   MAST3 pre-PK domain-like  
ENSPTRP00000018244   4.97e-43   181-281   MAST3 pre-PK domain-like  
ENSPTRP00000029006   1.83e-43   192-292   MAST3 pre-PK domain-like  

Gorilla gorilla 76_3.1 has 6 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSGGOP00000003339   1.31e-44   161-261   MAST3 pre-PK domain-like  
ENSGGOP00000004214   1.83e-43   339-439   MAST3 pre-PK domain-like  
ENSGGOP00000015289   4.97e-46   290-390   MAST3 pre-PK domain-like  
ENSGGOP00000015791   5.23e-43   181-281   MAST3 pre-PK domain-like  
ENSGGOP00000019292   1.31e-44   161-261   MAST3 pre-PK domain-like  
ENSGGOP00000028151   5.1e-43   203-303   MAST3 pre-PK domain-like  

Pongo abelii 76_2 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPPYP00000001628   3.14e-45   325-425   MAST3 pre-PK domain-like  
ENSPPYP00000010774   1.27e-44   187-287   MAST3 pre-PK domain-like  
ENSPPYP00000010902   5.23e-43   188-288   MAST3 pre-PK domain-like  
ENSPPYP00000017339   1.7e-43   182-282   MAST3 pre-PK domain-like  
ENSPPYP00000024585   1.57e-43   33-133   MAST3 pre-PK domain-like  

Nomascus leucogenys 76_1.0 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSNLEP00000004670   1.83e-43   263-363   MAST3 pre-PK domain-like  
ENSNLEP00000015613   1.31e-44   187-287   MAST3 pre-PK domain-like  
ENSNLEP00000020247   1.09e-45   219-319   MAST3 pre-PK domain-like  

Papio anubis 76 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPANP00000004154   5.36e-43   218-318   MAST3 pre-PK domain-like  
ENSPANP00000005029   1.7e-43   187-287   MAST3 pre-PK domain-like  
ENSPANP00000007652   1.31e-44   187-287   MAST3 pre-PK domain-like  
ENSPANP00000008406   1.44e-44   272-372   MAST3 pre-PK domain-like  
ENSPANP00000011327   2.48e-45   332-432   MAST3 pre-PK domain-like  

Macaca mulatta 76_1 has 7 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMMUP00000004227   5.1e-43   170-270   MAST3 pre-PK domain-like  
ENSMMUP00000007085   1.96e-44   187-287   MAST3 pre-PK domain-like  
ENSMMUP00000011453   1.31e-44   188-288   MAST3 pre-PK domain-like  
ENSMMUP00000020166   3.14e-45   325-425   MAST3 pre-PK domain-like  
ENSMMUP00000020175   0.000000000000017   300-355   MAST3 pre-PK domain-like  
ENSMMUP00000020176   3.27e-45   325-425   MAST3 pre-PK domain-like  
ENSMMUP00000020181   2.09e-44   202-302   MAST3 pre-PK domain-like  

Callithrix jacchus 76_3.2.1 has 10 significant domains in 10 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCJAP00000008852   3.92e-45   187-287   MAST3 pre-PK domain-like  
ENSCJAP00000008863   8.63e-45   183-283   MAST3 pre-PK domain-like  
ENSCJAP00000008865   1.1e-44   187-287   MAST3 pre-PK domain-like  
ENSCJAP00000025860   7.72e-43   127-227   MAST3 pre-PK domain-like  
ENSCJAP00000025865   8.5e-43   129-229   MAST3 pre-PK domain-like  
ENSCJAP00000029442   1.7e-44   187-287   MAST3 pre-PK domain-like  
ENSCJAP00000039026   2.48e-44   185-285   MAST3 pre-PK domain-like  
ENSCJAP00000039050   1.44e-31   33-110   MAST3 pre-PK domain-like  
ENSCJAP00000039073   0.0000000000000085   8-63   MAST3 pre-PK domain-like  
ENSCJAP00000039080   9.29e-46   10-110   MAST3 pre-PK domain-like  

Otolemur garnettii 76_3 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOGAP00000001018   6.8e-43   203-303   MAST3 pre-PK domain-like  
ENSOGAP00000005760   9.15e-46   325-425   MAST3 pre-PK domain-like  
ENSOGAP00000010940   5.62e-45   187-287   MAST3 pre-PK domain-like  
ENSOGAP00000018745   1.7e-43   384-484   MAST3 pre-PK domain-like  
ENSOGAP00000018944   1.83e-43   264-364   MAST3 pre-PK domain-like  

Microcebus murinus 76_1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMICP00000000942   2.62e-30   318-391   MAST3 pre-PK domain-like  
ENSMICP00000014801   0.000000445   202-232   MAST3 pre-PK domain-like  

Rattus norvegicus 76_5.0 has 7 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSRNOP00000000161   7.72e-45   274-374   MAST3 pre-PK domain-like  
ENSRNOP00000004646   1.1e-44   187-287   MAST3 pre-PK domain-like  
ENSRNOP00000034796   1.57e-41   187-287   MAST3 pre-PK domain-like  
ENSRNOP00000051170   1.1e-44   187-287   MAST3 pre-PK domain-like  
ENSRNOP00000057748   4.71e-43   132-232   MAST3 pre-PK domain-like  
ENSRNOP00000063928   5.23e-43   379-479   MAST3 pre-PK domain-like  
ENSRNOP00000067460   4.71e-43   136-236   MAST3 pre-PK domain-like  

Mus musculus 76_38 has 13 significant domains in 13 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000003908   1.44e-45   265-365   MAST3 pre-PK domain-like  
ENSMUSP00000096808   2.75e-43   202-302   MAST3 pre-PK domain-like  
ENSMUSP00000102093   1.44e-45   272-372   MAST3 pre-PK domain-like  
ENSMUSP00000102094   1.44e-45   326-426   MAST3 pre-PK domain-like  
ENSMUSP00000102095   1.44e-45   333-433   MAST3 pre-PK domain-like  
ENSMUSP00000105363   1.1e-44   187-287   MAST3 pre-PK domain-like  
ENSMUSP00000113547   3.4e-45   187-287   MAST3 pre-PK domain-like  
ENSMUSP00000128129   7.32e-44   175-275   MAST3 pre-PK domain-like  
ENSMUSP00000128464   2.88e-43   379-479   MAST3 pre-PK domain-like  
ENSMUSP00000128703   1.57e-41   187-287   MAST3 pre-PK domain-like  
ENSMUSP00000131651   2.62e-43   187-287   MAST3 pre-PK domain-like  
ENSMUSP00000131910   8.76e-44   187-287   MAST3 pre-PK domain-like  
ENSMUSP00000132263   1.14e-43   379-479   MAST3 pre-PK domain-like  
 
Weak hits:
ENSMUSP00000118340   0.0209   189-203   MAST3 pre-PK domain-like  
ENSMUSP00000126516   0.00314   194-212   MAST3 pre-PK domain-like  

Dipodomys ordii 76_1 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSDORP00000002491   1.7e-43   260-360   MAST3 pre-PK domain-like  
ENSDORP00000003965   1.31e-41   178-279   MAST3 pre-PK domain-like  
ENSDORP00000008463   1.31e-44   158-258   MAST3 pre-PK domain-like  
ENSDORP00000015528   1.83e-45   266-366   MAST3 pre-PK domain-like  

Ictidomys tridecemlineatus 76_2 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSTOP00000005400   2.88e-45   193-293   MAST3 pre-PK domain-like  
ENSSTOP00000007787   1.31e-44   187-287   MAST3 pre-PK domain-like  
ENSSTOP00000014855   1.83e-41   203-303   MAST3 pre-PK domain-like  
ENSSTOP00000015609   6.15e-45   334-434   MAST3 pre-PK domain-like  

Heterocephalus glaber v1.7-2 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
HGL_H00000251472   1.11e-44   187-287   MAST3 pre-PK domain-like  
HGL_H00000354671   8.11e-45   169-269   MAST3 pre-PK domain-like  
HGL_H00000385727   1.07e-37   249-344   MAST3 pre-PK domain-like  

Cavia porcellus 76_3 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCPOP00000000673   1.07e-43   202-302   MAST3 pre-PK domain-like  
ENSCPOP00000000695   7.85e-44   183-283   MAST3 pre-PK domain-like  
ENSCPOP00000012111   1.7e-45   223-323   MAST3 pre-PK domain-like  
ENSCPOP00000014058   5.62e-42   203-303   MAST3 pre-PK domain-like  

Oryctolagus cuniculus 76_2 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOCUP00000010313   3.27e-36   164-266   MAST3 pre-PK domain-like  
ENSOCUP00000012297   1.83e-45   251-351   MAST3 pre-PK domain-like  
ENSOCUP00000013497   1.7e-43   199-299   MAST3 pre-PK domain-like  

Ochotona princeps 76 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOPRP00000000776   3.92e-43   202-302   MAST3 pre-PK domain-like  
ENSOPRP00000004510   3.79e-16   217-286   MAST3 pre-PK domain-like  
ENSOPRP00000013457   2.62e-32   11-108   MAST3 pre-PK domain-like  
ENSOPRP00000014552   6.67e-43   265-364   MAST3 pre-PK domain-like  

Tupaia belangeri 76 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTBEP00000005606   5.62e-42   11-111   MAST3 pre-PK domain-like  
ENSTBEP00000005801   0.000000209   287-316   MAST3 pre-PK domain-like  

Sus scrofa 76_10.2 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSSCP00000014608   5.75e-46   11-111   MAST3 pre-PK domain-like  
ENSSSCP00000014775   1.83e-42   189-289   MAST3 pre-PK domain-like  
ENSSSCP00000017965   3.27e-43   135-235   MAST3 pre-PK domain-like  
ENSSSCP00000019883   3.27e-43   133-233   MAST3 pre-PK domain-like  

Bos taurus 76_3.1 has 7 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSBTAP00000007991   1.1e-44   186-286   MAST3 pre-PK domain-like  
ENSBTAP00000033207   9.29e-46   239-339   MAST3 pre-PK domain-like  
ENSBTAP00000036317   4.97e-42   211-311   MAST3 pre-PK domain-like  
ENSBTAP00000036658   3.53e-43   131-231   MAST3 pre-PK domain-like  
ENSBTAP00000053558   5.1e-42   204-304   MAST3 pre-PK domain-like  
ENSBTAP00000054362   3.53e-43   127-227   MAST3 pre-PK domain-like  
ENSBTAP00000056493   1.83e-43   128-228   MAST3 pre-PK domain-like  

Ovis aries 76_3.1 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOARP00000002194   8.63e-46   130-230   MAST3 pre-PK domain-like  
ENSOARP00000006372   7.85e-43   184-284   MAST3 pre-PK domain-like  
ENSOARP00000011235   4.97e-42   185-286   MAST3 pre-PK domain-like  
ENSOARP00000014651   5.1e-42   204-304   MAST3 pre-PK domain-like  

Vicugna pacos 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSVPAP00000004700   3.53e-43   371-471   MAST3 pre-PK domain-like  

Tursiops truncatus 76_1 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTTRP00000003369   1.09e-44   187-287   MAST3 pre-PK domain-like  
ENSTTRP00000005509   9.55e-42   182-282   MAST3 pre-PK domain-like  
ENSTTRP00000009574   3.66e-43   260-360   MAST3 pre-PK domain-like  
ENSTTRP00000012500   4.71e-45   266-366   MAST3 pre-PK domain-like  

Mustela putorius furo 76_1.0 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMPUP00000004530   1.03e-44   187-287   MAST3 pre-PK domain-like  
ENSMPUP00000012917   3.53e-45   335-435   MAST3 pre-PK domain-like  
ENSMPUP00000014619   3.79e-43   303-403   MAST3 pre-PK domain-like  
ENSMPUP00000015624   3.66e-42   188-288   MAST3 pre-PK domain-like  

  1 2 3 4 5 6 7 8 9   Next Last
Showing genomes 1 to 25 of 203

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]

Add assignments from groups of genomes

View all assignments containing a MAST3 pre-PK domain-like domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]

Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   6174 6174
No Yes Homo sapiens 76_38 Human 13 13
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 4 4
No Yes Gorilla gorilla 76_3.1 Western gorilla 6 6
No Yes Pongo abelii 76_2 Sumatran orangutan 5 5
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 3 3
No Yes Papio anubis 76 Olive baboon 5 5
No Yes Macaca mulatta 76_1 Rhesus monkey 7 7
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 10 10
No Yes Otolemur garnettii 76_3 Small-eared galago 5 5
No Yes Microcebus murinus 76_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 76_5.0 Norway rat 7 7
No Yes Mus musculus 76_38 House mouse 13 13
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 4 4
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 4 4
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 3 3
No Yes Cavia porcellus 76_3 Domestic guinea pig 4 4
No Yes Oryctolagus cuniculus 76_2 Rabbit 3 3
No Yes Ochotona princeps 76 American pika 4 4
No Yes Tupaia belangeri 76 Northern tree shrew 2 2
No Yes Sus scrofa 76_10.2 Pig 4 4
No Yes Bos taurus 76_3.1 Cattle 7 7
No Yes Ovis aries 76_3.1 Sheep 4 4
No Yes Vicugna pacos 76_1 Alpaca 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 4 4
No Yes Mustela putorius furo 76_1.0 Domestic ferret 4 4
No Yes Ailuropoda melanoleuca 76_1 Giant panda 5 5
No Yes Canis familiaris 76_3.1 Dog 5 5
No Yes Felis catus 76_6.2 Domestic cat 4 4
No Yes Equus caballus 76_2 Horse 7 7
No Yes Myotis lucifugus 76_2.0 Little brown bat 6 6
No Yes Pteropus vampyrus 76_1 Large flying fox 4 4
No Yes Sorex araneus 76_1 European shrew 3 3
No Yes Erinaceus europaeus 76 Western European hedgehog 1 1
No Yes Procavia capensis 76_1 Cape rock hyrax 4 4
No Yes Loxodonta africana 76_3 African savanna elephant 9 9
No Yes Echinops telfairi 76 Small Madagascar hedgehog 2 2
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 3 3
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 1 1
No Yes Macropus eugenii 76_1.0 Tammar wallaby 4 4
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 5 5
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 5 5
No Yes Ornithorhynchus anatinus 76_5 Platypus 4 4
No Yes Saccoglossus kowalevskii v3.0   1 1
No Yes Petromyzon marinus 76_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 76_2 Turkey 4 4
No Yes Gallus gallus 76_4 Chicken 3 3
No Yes Anas platyrhynchos 76_1.0 Mallard 3 3
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 3 3
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 3 3
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 5 5
No Yes Anolis carolinensis 76_2.0 Green anole 4 4
No Yes Xenopus laevis African clawed frog 3 3
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 4 4
No Yes Latimeria chalumnae 76_1 Coelacanth 4 4
No Yes Lepisosteus oculatus 76 Spotted gar 5 5
No Yes Gadus morhua 76_1 Atlantic cod 6 6
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 9 9
No Yes Takifugu rubripes 76_4 Torafugu 15 15
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 7 7
No Yes Oryzias latipes 76_1 Japanese medaka 9 9
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 6 6
No Yes Poecilia formosa 76 Amazon molly 5 5
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 10 10
No Yes Astyanax mexicanus 76 Mexican tetra 5 5
No Yes Danio rerio 76_9 Zebrafish 7 7
No Yes Oikopleura dioica   1 1
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 2 2
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Adineta vaga   2 2
No Yes Octopus bimaculoides 280   4 4
No Yes Crassostrea gigas 22 Pacific oyster 1 1
No Yes Lottia gigantea Owl limpet 1 1
No Yes Helobdella robusta   3 3
No Yes Capitella sp. I   1 1
No Yes Danaus plexippus OGS1.0 Monarch butterfly 1 1
No Yes Heliconius melpomene Postman butterfly 1 1
No Yes Bombyx mori Domestic silkworm 1 1
No Yes Nasonia vitripennis Jewel wasp 1 1
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 3 3
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 1 1
No Yes Linepithema humile v1.1 Argentine ant 1 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 1 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 1 1
No Yes Atta cephalotes v1.1   1 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 1 1
No Yes Lucilia cuprina Australian sheep blowfly 1 1
No Yes Drosophila grimshawi 1.3   1 1
No Yes Drosophila willistoni 1.3   1 1
No Yes Drosophila pseudoobscura 2.13   1 1
No Yes Drosophila suzukii   1 1
No Yes Drosophila yakuba 1.3   2 2
No Yes Drosophila simulans 1.3   1 1
No Yes Drosophila sechellia 1.3   1 1
No Yes Drosophila melanogaster 76_5 Fruit fly 2 2
No Yes Drosophila erecta 1.3   1 1
No Yes Drosophila ananassae 1.3   1 1
No Yes Drosophila virilis 1.2   1 1
No Yes Drosophila mojavensis 1.3   1 1
No Yes Megaselia scalaris 22   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 2 2
No Yes Culex pipiens quinquefasciatus Southern house mosquito 2 2
No Yes Anopheles darlingi 22 American malaria mosquito 1 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 1 1
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 1 1
No Yes Acyrthosiphon pisum Pea aphid 1 1
No Yes Rhodnius prolixus 22   1 1
No Yes Daphnia pulex Common water flea 1 1
No Yes Strigamia maritima 22   1 1
No Yes Sarcoptes scabiei   1 1
No Yes Tetranychus urticae Two-spotted spider mite 1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 1 1
No Yes Pristionchus pacificus   1 1
No Yes Meloidogyne incognita Southern root-knot nematode 3 3
No Yes Meloidogyne hapla   1 1
No Yes Onchocerca volvulus 22   1 1
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 2 2
No Yes Caenorhabditis japonica   1 1
No Yes Caenorhabditis brenneri   2 2
No Yes Caenorhabditis remanei   1 1
No Yes Caenorhabditis elegans 76_235 Roundworm 8 8
No Yes Caenorhabditis briggsae 2   1 1
No Yes Trichinella spiralis 22   1 1
No Yes Hymenolepis microstoma   1 1
No Yes Echinococcus multilocularis   1 1
No Yes Echinococcus granulosus   1 1
No Yes Taenia solium Pork tapeworm 1 1
No Yes Schistosoma mansoni   1 1
No Yes Mnemiopsis leidyi Sea walnut 1 1
No Yes Acropora digitifera v1.0   1 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1 1
No Yes Hydra vulgaris   1 1
No Yes Amphimedon queenslandica   1 1
No Yes Trichoplax adhaerens   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 6 6
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 1 1
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 1 1
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 4 4
No Yes Homo sapiens 75_37 (old version GRC) Human 14 14
No Yes Homo sapiens (NCBI version) Human 5 5
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 4 4
No Yes Loa loa v3.3 (Request) Eye worm 1 1
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 1 1
No Yes Homo sapiens 69_37 Human 4 4
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 4 4
No Yes Gorilla gorilla 69_3.1 Western gorilla 5 5
No Yes Pongo abelii 69_2 Sumatran orangutan 4 4
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 3 3
No Yes Macaca mulatta 69_1 Rhesus monkey 3 3
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 4 4
No Yes Otolemur garnettii 69_3 Small-eared galago 4 4
No Yes Microcebus murinus 69_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 69_3.4 Norway rat 5 5
No Yes Mus musculus 69_38 House mouse 4 4
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 4 4
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 3 3
No Yes Cavia porcellus 69_3 Domestic guinea pig 4 4
No Yes Oryctolagus cuniculus 69_2 Rabbit 3 3
No Yes Ochotona princeps 69 American pika 4 4
No Yes Tupaia belangeri 69 Northern tree shrew 2 2
No Yes Sus scrofa 69_10.2 Pig 3 3
No Yes Bos taurus 69_3.1 Cattle 4 4
No Yes Vicugna pacos 69_1 Alpaca 1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 4 4
No Yes Mustela putorius furo 69_1.0 Domestic ferret 4 4
No Yes Ailuropoda melanoleuca 69_1 Giant panda 4 4
No Yes Canis familiaris 69_3.1 Dog 3 3
No Yes Felis catus 69 Domestic cat 3 3
No Yes Equus caballus 69_2 Horse 4 4
No Yes Myotis lucifugus 69_2.0 Little brown bat 4 4
No Yes Pteropus vampyrus 69_1 Large flying fox 4 4
No Yes Sorex araneus 69_1 European shrew 3 3
No Yes Erinaceus europaeus 69 Western European hedgehog 1 1
No Yes Procavia capensis 69_1 Cape rock hyrax 4 4
No Yes Loxodonta africana 69_3 African savanna elephant 5 5
No Yes Echinops telfairi 69 Small Madagascar hedgehog 2 2
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 2 2
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 1 1
No Yes Macropus eugenii 69_1.0 Tammar wallaby 4 4
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 4 4
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 4 4
No Yes Ornithorhynchus anatinus 69_5 Platypus 4 4
No Yes Petromyzon marinus 69_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 69_2 Turkey 3 3
No Yes Gallus gallus 69_2 Chicken 3 3
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 3 3
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 4 4
No Yes Anolis carolinensis 69_2.0 Green anole 4 4
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 4 4
No Yes Latimeria chalumnae 69_1 Coelacanth 4 4
No Yes Gadus morhua 69_1 Atlantic cod 6 6
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 5 5
No Yes Takifugu rubripes 69_4 Torafugu 4 4
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 6 6
No Yes Oryzias latipes 69_1 Japanese medaka 5 5
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 6 6
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 6 6
No Yes Danio rerio 69_9 Zebrafish 6 6
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 1 1
No Yes Drosophila melanogaster 69_5 Fruit fly 1 1
No Yes Caenorhabditis elegans 69_215 Roundworm 1 1
No Yes NCBI 2017_08 genome   3595 3591
No Yes STRING v9.0.5 (STRING)   125 124
No Yes Uniprot 2018_03 genome   1434 1424
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   2 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   6 6
No Yes TargetDB (Targets)   6 6

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.