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FHV B2 protein-like superfamily domain assignments
in
NCBI viral sequences

Network of domain occurrence in all genomes

Assignment details

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NCBI viral sequences (Viral) has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|22681029|ref|NP_689440.1|   4.18e-34   3-71   FHV B2 protein-like  
gi|22681058|ref|NP_689446.1|   3.79e-43   2-71   FHV B2 protein-like  
gi|320340136|ref|YP_004207811.1|   0.000000915   23-86   FHV B2 protein-like  
gi|34610123|ref|NP_919037.1|   0.0000288   29-86   FHV B2 protein-like  
gi|62866492|ref|YP_227598.1|   3.79e-43   2-71   FHV B2 protein-like  
 
Weak hits:
gi|21234384|ref|NP_640294.1|   0.0392   95-127   FHV B2 protein-like  

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View all assignments containing a FHV B2 protein-like domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   45 45
No Yes NCBI 2017_08 genome   6 6
No Yes Uniprot 2018_03 genome   9 9
No Yes NCBI viral sequences (Viral)   5 5
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   6 6
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   12 12
No Yes UniProt viral sequences (Viral)   5 5

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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