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HIV integrase-binding domain superfamily domain assignments
in
all genomes

Assignment details

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25 selected genomes have 57 significant domains in 57 proteins.

Showing genomes 1 to 25 of 183
  1 2 3 4 5 6 7 8   Next Last

Homo sapiens 76_38 has 6 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSP00000370109   6.41e-30   347-426   HIV integrase-binding domain  
ENSP00000370114   6.41e-30   347-426   HIV integrase-binding domain  
ENSP00000467513   3.66e-23   1-62   HIV integrase-binding domain  
ENSP00000468175   7.45e-31   52-130   HIV integrase-binding domain  
ENSP00000483345   8.76e-30   470-548   HIV integrase-binding domain  
ENSP00000483702   8.76e-30   470-548   HIV integrase-binding domain  

Pan troglodytes 76_2.1.4 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPTRP00000017529   5.49e-30   288-366   HIV integrase-binding domain  
ENSPTRP00000035550   6.41e-30   347-426   HIV integrase-binding domain  

Gorilla gorilla 76_3.1 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSGGOP00000015764   6.41e-30   347-426   HIV integrase-binding domain  
ENSGGOP00000020967   7.06e-30   376-454   HIV integrase-binding domain  
ENSGGOP00000027985   5.36e-30   280-358   HIV integrase-binding domain  

Pongo abelii 76_2 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPPYP00000010549   6.02e-21   258-317   HIV integrase-binding domain  
ENSPPYP00000021512   6.41e-30   347-426   HIV integrase-binding domain  

Nomascus leucogenys 76_1.0 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSNLEP00000016103   0.0000000000000118   62-141   HIV integrase-binding domain  
ENSNLEP00000021346   6.41e-30   347-426   HIV integrase-binding domain  

Papio anubis 76 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPANP00000000624   8.24e-30   441-519   HIV integrase-binding domain  
ENSPANP00000008244   8.76e-30   470-548   HIV integrase-binding domain  
ENSPANP00000019205   6.41e-30   347-426   HIV integrase-binding domain  

Macaca mulatta 76_1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMMUP00000002974   4.71e-30   252-331   HIV integrase-binding domain  
ENSMMUP00000025108   0.00000000615   482-516   HIV integrase-binding domain  
 
Weak hits:
ENSMMUP00000018281   0.00942   300-369   HIV integrase-binding domain  

Callithrix jacchus 76_3.2.1 has 7 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCJAP00000022889   6.41e-30   347-426   HIV integrase-binding domain  
ENSCJAP00000022929   4.05e-30   215-294   HIV integrase-binding domain  
ENSCJAP00000022940   6.28e-30   344-423   HIV integrase-binding domain  
ENSCJAP00000032346   8.76e-30   471-549   HIV integrase-binding domain  
ENSCJAP00000032350   8.5e-30   457-535   HIV integrase-binding domain  
ENSCJAP00000049513   5.23e-30   355-433   HIV integrase-binding domain  
ENSCJAP00000050849   7.59e-30   405-483   HIV integrase-binding domain  
 
Weak hits:
ENSCJAP00000042337   0.000144   24-51   HIV integrase-binding domain  

Otolemur garnettii 76_3 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOGAP00000001950   6.41e-30   346-425   HIV integrase-binding domain  
ENSOGAP00000006606   1.44e-29   473-551   HIV integrase-binding domain  

Microcebus murinus 76_1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMICP00000000296   1.57e-27   476-549   HIV integrase-binding domain  
ENSMICP00000012708   4.97e-30   347-426   HIV integrase-binding domain  

Rattus norvegicus 76_5.0 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSRNOP00000016130   6.41e-30   345-424   HIV integrase-binding domain  
ENSRNOP00000064555   9.29e-30   466-544   HIV integrase-binding domain  

Mus musculus 76_38 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000002911   7.98e-30   466-544   HIV integrase-binding domain  
ENSMUSP00000030207   6.41e-30   345-424   HIV integrase-binding domain  

Dipodomys ordii 76_1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSDORP00000004592   5.89e-30   317-396   HIV integrase-binding domain  
ENSDORP00000013380   2.75e-30   472-550   HIV integrase-binding domain  

Ictidomys tridecemlineatus 76_2 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSTOP00000001961   6.15e-30   333-412   HIV integrase-binding domain  
ENSSTOP00000006607   3.92e-30   472-550   HIV integrase-binding domain  

Heterocephalus glaber v1.7-2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
HGL_H00000370114-3   2.88e-30   470-548   HIV integrase-binding domain  

Cavia porcellus 76_3 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCPOP00000004583   6.41e-30   346-425   HIV integrase-binding domain  
ENSCPOP00000015151   1.57e-29   444-522   HIV integrase-binding domain  

Oryctolagus cuniculus 76_2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOCUP00000008046   6.41e-30   348-427   HIV integrase-binding domain  

Ochotona princeps 76 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOPRP00000003310   6.41e-30   347-426   HIV integrase-binding domain  
ENSOPRP00000013680   1.03e-29   469-547   HIV integrase-binding domain  
 
Weak hits:
ENSOPRP00000012964   0.0392   191-236   HIV integrase-binding domain  

Tupaia belangeri 76 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTBEP00000000628   6.41e-30   347-426   HIV integrase-binding domain  

Sus scrofa 76_10.2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSSCP00000014360   2.88e-30   468-546   HIV integrase-binding domain  

Bos taurus 76_3.1 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSBTAP00000010356   6.41e-30   347-426   HIV integrase-binding domain  
ENSBTAP00000017626   2.09e-30   347-425   HIV integrase-binding domain  
ENSBTAP00000036576   1.7e-17   34-111   HIV integrase-binding domain  

Ovis aries 76_3.1 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOARP00000010167   2.62e-30   427-505   HIV integrase-binding domain  
ENSOARP00000015030   6.41e-30   347-426   HIV integrase-binding domain  
ENSOARP00000020770   1.57e-25   304-383   HIV integrase-binding domain  

Vicugna pacos 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSVPAP00000005409   6.41e-30   347-426   HIV integrase-binding domain  

Tursiops truncatus 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTTRP00000001619   4.45e-30   467-545   HIV integrase-binding domain  

Mustela putorius furo 76_1.0 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMPUP00000004024   6.41e-30   347-426   HIV integrase-binding domain  
ENSMPUP00000005044   3.14e-30   511-589   HIV integrase-binding domain  

  1 2 3 4 5 6 7 8   Next Last
Showing genomes 1 to 25 of 183

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Select to display   Genome       Domains   Proteins
No Yes ALL   2513 2513
No Yes Homo sapiens 76_38 Human 6 6
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 2 2
No Yes Gorilla gorilla 76_3.1 Western gorilla 3 3
No Yes Pongo abelii 76_2 Sumatran orangutan 2 2
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 2 2
No Yes Papio anubis 76 Olive baboon 3 3
No Yes Macaca mulatta 76_1 Rhesus monkey 2 2
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 7 7
No Yes Otolemur garnettii 76_3 Small-eared galago 2 2
No Yes Microcebus murinus 76_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 76_5.0 Norway rat 2 2
No Yes Mus musculus 76_38 House mouse 2 2
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 2 2
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 2 2
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 1 1
No Yes Cavia porcellus 76_3 Domestic guinea pig 2 2
No Yes Oryctolagus cuniculus 76_2 Rabbit 1 1
No Yes Ochotona princeps 76 American pika 2 2
No Yes Tupaia belangeri 76 Northern tree shrew 1 1
No Yes Sus scrofa 76_10.2 Pig 1 1
No Yes Bos taurus 76_3.1 Cattle 3 3
No Yes Ovis aries 76_3.1 Sheep 3 3
No Yes Vicugna pacos 76_1 Alpaca 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 1 1
No Yes Mustela putorius furo 76_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 76_1 Giant panda 2 2
No Yes Canis familiaris 76_3.1 Dog 3 3
No Yes Felis catus 76_6.2 Domestic cat 3 3
No Yes Equus caballus 76_2 Horse 1 1
No Yes Myotis lucifugus 76_2.0 Little brown bat 1 1
No Yes Pteropus vampyrus 76_1 Large flying fox 2 2
No Yes Sorex araneus 76_1 European shrew 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 1 1
No Yes Procavia capensis 76_1 Cape rock hyrax 2 2
No Yes Loxodonta africana 76_3 African savanna elephant 3 3
No Yes Echinops telfairi 76 Small Madagascar hedgehog 2 2
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 1 1
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 1 1
No Yes Macropus eugenii 76_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 2 2
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 2 2
No Yes Ornithorhynchus anatinus 76_5 Platypus 1 1
No Yes Saccoglossus kowalevskii v3.0   6 6
No Yes Petromyzon marinus 76_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 76_2 Turkey 2 2
No Yes Gallus gallus 76_4 Chicken 3 3
No Yes Anas platyrhynchos 76_1.0 Mallard 2 2
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 2 2
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 2 2
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 3 3
No Yes Anolis carolinensis 76_2.0 Green anole 3 3
No Yes Xenopus laevis African clawed frog 8 8
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 3 3
No Yes Latimeria chalumnae 76_1 Coelacanth 3 3
No Yes Lepisosteus oculatus 76 Spotted gar 3 3
No Yes Gadus morhua 76_1 Atlantic cod 3 3
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 3 3
No Yes Takifugu rubripes 76_4 Torafugu 20 20
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 4 4
No Yes Oryzias latipes 76_1 Japanese medaka 3 3
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 2 2
No Yes Poecilia formosa 76 Amazon molly 2 2
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 2 2
No Yes Astyanax mexicanus 76 Mexican tetra 1 1
No Yes Danio rerio 76_9 Zebrafish 5 5
No Yes Ciona intestinalis 76 Vase tunicate 1 1
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Octopus bimaculoides 280   1 1
No Yes Crassostrea gigas 22 Pacific oyster 2 2
No Yes Capitella sp. I   1 1
No Yes Danaus plexippus OGS1.0 Monarch butterfly 1 1
No Yes Heliconius melpomene Postman butterfly 1 1
No Yes Bombyx mori Domestic silkworm 1 1
No Yes Nasonia vitripennis Jewel wasp 1 1
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 1 1
No Yes Linepithema humile v1.1 Argentine ant 1 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 1 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 1 1
No Yes Atta cephalotes v1.1   1 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 1 1
No Yes Lucilia cuprina Australian sheep blowfly 1 1
No Yes Drosophila grimshawi 1.3   2 2
No Yes Drosophila willistoni 1.3   2 2
No Yes Drosophila pseudoobscura 2.13   4 4
No Yes Drosophila persimilis 1.3   2 2
No Yes Drosophila suzukii   2 2
No Yes Drosophila yakuba 1.3   1 1
No Yes Drosophila simulans 1.3   2 2
No Yes Drosophila sechellia 1.3   2 2
No Yes Drosophila melanogaster 76_5 Fruit fly 2 2
No Yes Drosophila erecta 1.3   3 3
No Yes Drosophila ananassae 1.3   1 1
No Yes Drosophila virilis 1.2   1 1
No Yes Drosophila mojavensis 1.3   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 1 1
No Yes Culex pipiens quinquefasciatus Southern house mosquito 1 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 1 1
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 1 1
No Yes Acyrthosiphon pisum Pea aphid 2 2
No Yes Rhodnius prolixus 22   3 3
No Yes Daphnia pulex Common water flea 1 1
No Yes Strigamia maritima 22   1 1
No Yes Sarcoptes scabiei   1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 1 1
No Yes Hymenolepis microstoma   2 2
No Yes Echinococcus multilocularis   1 1
No Yes Echinococcus granulosus   1 1
No Yes Taenia solium Pork tapeworm 2 2
No Yes Schistosoma mansoni   2 2
No Yes Hydra vulgaris   1 1
No Yes Amphimedon queenslandica   1 1
No Yes Monosiga brevicollis   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 6 6
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 1 1
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 7 7
No Yes Homo sapiens (NCBI version) Human 4 4
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 2 2
No Yes Homo sapiens 69_37 Human 2 2
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 2 2
No Yes Gorilla gorilla 69_3.1 Western gorilla 2 2
No Yes Pongo abelii 69_2 Sumatran orangutan 2 2
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 2 2
No Yes Macaca mulatta 69_1 Rhesus monkey 2 2
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 2 2
No Yes Otolemur garnettii 69_3 Small-eared galago 2 2
No Yes Microcebus murinus 69_1 Gray mouse lemur 2 2
No Yes Rattus norvegicus 69_3.4 Norway rat 1 1
No Yes Mus musculus 69_38 House mouse 2 2
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 2 2
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 2 2
No Yes Cavia porcellus 69_3 Domestic guinea pig 2 2
No Yes Oryctolagus cuniculus 69_2 Rabbit 1 1
No Yes Ochotona princeps 69 American pika 2 2
No Yes Tupaia belangeri 69 Northern tree shrew 1 1
No Yes Sus scrofa 69_10.2 Pig 1 1
No Yes Bos taurus 69_3.1 Cattle 3 3
No Yes Vicugna pacos 69_1 Alpaca 1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 1 1
No Yes Mustela putorius furo 69_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 69_1 Giant panda 2 2
No Yes Canis familiaris 69_3.1 Dog 2 2
No Yes Felis catus 69 Domestic cat 1 1
No Yes Equus caballus 69_2 Horse 1 1
No Yes Myotis lucifugus 69_2.0 Little brown bat 1 1
No Yes Pteropus vampyrus 69_1 Large flying fox 2 2
No Yes Sorex araneus 69_1 European shrew 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 1 1
No Yes Procavia capensis 69_1 Cape rock hyrax 2 2
No Yes Loxodonta africana 69_3 African savanna elephant 2 2
No Yes Echinops telfairi 69 Small Madagascar hedgehog 2 2
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 1 1
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 1 1
No Yes Macropus eugenii 69_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 2 2
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 2 2
No Yes Ornithorhynchus anatinus 69_5 Platypus 1 1
No Yes Petromyzon marinus 69_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 69_2 Turkey 2 2
No Yes Gallus gallus 69_2 Chicken 1 1
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 2 2
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 2 2
No Yes Anolis carolinensis 69_2.0 Green anole 3 3
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 69_1 Coelacanth 2 2
No Yes Gadus morhua 69_1 Atlantic cod 3 3
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 2 2
No Yes Takifugu rubripes 69_4 Torafugu 3 3
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 3 3
No Yes Oryzias latipes 69_1 Japanese medaka 3 3
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 2 2
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 2 2
No Yes Danio rerio 69_9 Zebrafish 3 3
No Yes Ciona intestinalis 69 Vase tunicate 1 1
No Yes Drosophila melanogaster 69_5 Fruit fly 1 1
No Yes NCBI 2017_08 genome   1116 1115
No Yes STRING v9.0.5 (STRING)   73 73
No Yes Uniprot 2018_03 genome   687 686
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   45 45
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   40 40

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