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TROVE domain-like superfamily domain assignments
in
all eukaryotic genomes

Assignment details

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25 selected genomes have 71 significant domains in 68 proteins.

Showing genomes 1 to 25 of 229
  1 2 3 4 5 6 7 8 9 10   Next Last

Homo sapiens 76_38 has 13 significant domains in 13 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSP00000262715   9.15e-63   233-381,431-581,646-669   TROVE domain-like  
ENSP00000356411   3.53e-135   5-362   TROVE domain-like  
ENSP00000356413   3.14e-135   5-362   TROVE domain-like  
ENSP00000356414   3.27e-135   5-362   TROVE domain-like  
ENSP00000356415   3.4e-135   5-362   TROVE domain-like  
ENSP00000356416   3.53e-135   5-362   TROVE domain-like  
ENSP00000383752   3.53e-135   5-362   TROVE domain-like  
ENSP00000401176   0.000000131   5-43   TROVE domain-like  
ENSP00000424612   3.66e-58   2-194   TROVE domain-like  
ENSP00000425296   0.000000157   5-41   TROVE domain-like  
ENSP00000451634   3.66e-63   233-381,431-581,646-669   TROVE domain-like  
ENSP00000452574   5.23e-34   243-473,538-561   TROVE domain-like  
ENSP00000472298   8.89e-30   1-87   TROVE domain-like  
 
Weak hits:
ENSP00000299259   0.0144   69-216   TROVE domain-like  
ENSP00000342581   0.0693   248-338   TROVE domain-like  
ENSP00000361877   0.0549   234-325   TROVE domain-like  
ENSP00000361893   0.0693   248-338   TROVE domain-like  
ENSP00000361901   0.0575   297-388   TROVE domain-like  
ENSP00000377161   0.0654   229-319   TROVE domain-like  
ENSP00000377166   0.0549   253-344   TROVE domain-like  
ENSP00000394506   0.0654   229-319   TROVE domain-like  
ENSP00000395489   0.0209   196-288   TROVE domain-like  
ENSP00000403453   0.068   253-343   TROVE domain-like  
ENSP00000437579   0.0549   234-325   TROVE domain-like  
ENSP00000473949   0.068   253-343   TROVE domain-like  

Pan troglodytes 76_2.1.4 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPTRP00000010340   6.15e-63   233-381,431-581,646-669   TROVE domain-like  
ENSPTRP00000051388   3.53e-135   5-362   TROVE domain-like  
 
Weak hits:
ENSPTRP00000021085   0.0209   166-245   TROVE domain-like  
ENSPTRP00000036632   0.0759   229-319   TROVE domain-like  

Gorilla gorilla 76_3.1 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSGGOP00000000206   2.48e-48   143-404,469-492   TROVE domain-like  
ENSGGOP00000017278   4.84e-48   143-291,341-491,556-579   TROVE domain-like  
ENSGGOP00000028669   3.53e-135   5-362   TROVE domain-like  
 
Weak hits:
ENSGGOP00000002789   0.0144   69-216   TROVE domain-like  
ENSGGOP00000007583   0.00536   166-245   TROVE domain-like  

Pongo abelii 76_2 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPPYP00000000451   7.19e-135   5-362   TROVE domain-like  
ENSPPYP00000006332   1.2e-63   233-381,431-581,646-669   TROVE domain-like  
 
Weak hits:
ENSPPYP00000004676   0.017   48-121   TROVE domain-like  
ENSPPYP00000022026   0.0641   248-338   TROVE domain-like  

Nomascus leucogenys 76_1.0 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSNLEP00000013141   1.44e-62   206-354,404-554,619-642   TROVE domain-like  
ENSNLEP00000021928   2.48e-134   6-362   TROVE domain-like  
 
Weak hits:
ENSNLEP00000007452   0.0144   69-216   TROVE domain-like  
ENSNLEP00000012732   0.00275   45-121   TROVE domain-like  
ENSNLEP00000021336   0.068   297-387   TROVE domain-like  

Papio anubis 76 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPANP00000007250   3.4e-134   5-362   TROVE domain-like  
ENSPANP00000014562   3.4e-62   224-373,423-573,638-661   TROVE domain-like  
ENSPANP00000014563   3.4e-62   233-382,432-582,647-670   TROVE domain-like  

Macaca mulatta 76_1 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMMUP00000021364   3.14e-62   232-381,431-581,646-669   TROVE domain-like  
ENSMMUP00000021365   3.14e-62   232-381,431-581,646-669   TROVE domain-like  
ENSMMUP00000029814   5.49e-71   5-199   TROVE domain-like  
 
Weak hits:
ENSMMUP00000002949   0.0131   69-124   TROVE domain-like  
ENSMMUP00000012877   0.0144   69-216   TROVE domain-like  
ENSMMUP00000019534   0.0667   253-343   TROVE domain-like  
ENSMMUP00000039916   0.0484   234-325   TROVE domain-like  
ENSMMUP00000039920   0.0641   187-277   TROVE domain-like  
ENSMMUP00000039923   0.0641   229-319   TROVE domain-like  

Callithrix jacchus 76_3.2.1 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCJAP00000015848   1.96e-133   5-362   TROVE domain-like  
ENSCJAP00000015862   1.83e-133   5-362   TROVE domain-like  
ENSCJAP00000018119   6.28e-62   239-383,433-583,648-671   TROVE domain-like  
ENSCJAP00000048681   4.71e-28   1-87   TROVE domain-like  
ENSCJAP00000049325   1.96e-133   5-362   TROVE domain-like  
 
Weak hits:
ENSCJAP00000050854   0.0144   69-216   TROVE domain-like  

Otolemur garnettii 76_3 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOGAP00000011937   2.35e-49   216-353,403-554,623-646   TROVE domain-like  
ENSOGAP00000020754   3.79e-134   5-362   TROVE domain-like  
 
Weak hits:
ENSOGAP00000001291   0.0523   234-324   TROVE domain-like  
ENSOGAP00000003120   0.0732   366-416   TROVE domain-like  
ENSOGAP00000011476   0.0366   1035-1095   TROVE domain-like  

Microcebus murinus 76_1 has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMICP00000001378   3.79e-64   194-331,381-531,599-622   TROVE domain-like  
ENSMICP00000010470   4.45e-85   5-245   TROVE domain-like  
  0.00000000000196   317-362   TROVE domain-like  

Rattus norvegicus 76_5.0 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSRNOP00000004701   1.57e-133   6-362   TROVE domain-like  
ENSRNOP00000012235   1.14e-67   241-389,441-592   TROVE domain-like  
 
Weak hits:
ENSRNOP00000020407   0.0589   248-344   TROVE domain-like  
ENSRNOP00000037810   0.00732   13-58   TROVE domain-like  
ENSRNOP00000041336   0.068   248-344   TROVE domain-like  
ENSRNOP00000042748   0.0314   29-85   TROVE domain-like  
ENSRNOP00000049041   0.0471   234-330   TROVE domain-like  

Mus musculus 76_38 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000006444   3.66e-65   240-385,437-588,655-676   TROVE domain-like  
ENSMUSP00000125623   1.83e-134   6-362   TROVE domain-like  
 
Weak hits:
ENSMUSP00000028128   0.0654   234-330   TROVE domain-like  
ENSMUSP00000049272   0.0942   248-344   TROVE domain-like  
ENSMUSP00000054515   0.0131   12-102   TROVE domain-like  
ENSMUSP00000106090   0.0144   69-216   TROVE domain-like  
ENSMUSP00000109384   0.0693   248-344   TROVE domain-like  
ENSMUSP00000109385   0.0942   248-344   TROVE domain-like  
ENSMUSP00000109386   0.0863   229-325   TROVE domain-like  
ENSMUSP00000109391   0.0706   253-349   TROVE domain-like  
ENSMUSP00000109392   0.0654   234-330   TROVE domain-like  
ENSMUSP00000109393   0.0654   234-330   TROVE domain-like  
ENSMUSP00000109394   0.0955   253-349   TROVE domain-like  
ENSMUSP00000109396   0.0785   297-393   TROVE domain-like  
ENSMUSP00000139390   0.0719   248-344   TROVE domain-like  
ENSMUSP00000140293   0.0484   32-95   TROVE domain-like  

Dipodomys ordii 76_1 has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSDORP00000002378   1.44e-16   259-351   TROVE domain-like  
ENSDORP00000005760   4.05e-92   5-267   TROVE domain-like  
  0.0000000000262   317-362   TROVE domain-like  
 
Weak hits:
ENSDORP00000006507   0.0248   13-86   TROVE domain-like  
ENSDORP00000011082   0.0798   253-349   TROVE domain-like  

Ictidomys tridecemlineatus 76_2 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSTOP00000009023   2.09e-62   208-353,405-555,623-646   TROVE domain-like  
ENSSTOP00000011031   1.57e-134   6-362   TROVE domain-like  
ENSSTOP00000020821   2.09e-62   210-355,407-557,625-648   TROVE domain-like  
 
Weak hits:
ENSSTOP00000004797   0.0144   69-216   TROVE domain-like  
ENSSTOP00000007295   0.0628   253-349   TROVE domain-like  

Heterocephalus glaber v1.7-2 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
HGL_H00000262715   1.09e-59   205-340,388-538,604-625   TROVE domain-like  
HGL_H00000356411   1.7e-133   5-362   TROVE domain-like  
 
Weak hits:
HGL_H00000299259-3   0.0144   69-216   TROVE domain-like  

Cavia porcellus 76_3 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCPOP00000000591   5.62e-134   5-362   TROVE domain-like  
ENSCPOP00000000961   2.35e-57   136-266,309-459,525-548   TROVE domain-like  
ENSCPOP00000018466   8.11e-29   10-38,81-203   TROVE domain-like  
ENSCPOP00000018966   1.12e-54   180-318,360-510,576-599   TROVE domain-like  

Oryctolagus cuniculus 76_2 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOCUP00000002000   1.83e-60   178-327,379-529,599-620   TROVE domain-like  
ENSOCUP00000011029   3.66e-132   6-362   TROVE domain-like  
 
Weak hits:
ENSOCUP00000005579   0.0144   69-216   TROVE domain-like  
ENSOCUP00000010590   0.0693   253-349   TROVE domain-like  
ENSOCUP00000014219   0.0745   292-388   TROVE domain-like  

Ochotona princeps 76 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOPRP00000012737   6.02e-45   248-338,389-510   TROVE domain-like  
ENSOPRP00000015742   1.31e-58   2-178   TROVE domain-like  
 
Weak hits:
ENSOPRP00000015568   0.068   212-308   TROVE domain-like  

Tupaia belangeri 76 has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTBEP00000002330   1.2e-61   182-319,371-522   TROVE domain-like  
ENSTBEP00000005869   3.01e-57   195-362   TROVE domain-like  
  6.28e-30   5-112   TROVE domain-like  
 
Weak hits:
ENSTBEP00000007205   0.0131   51-198   TROVE domain-like  

Sus scrofa 76_10.2 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSSCP00000002340   1.22e-26   28-179   TROVE domain-like  

Bos taurus 76_3.1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSBTAP00000001564   3.66e-60   242-387,438-588,656-679   TROVE domain-like  
ENSBTAP00000018350   7.45e-135   5-362   TROVE domain-like  
 
Weak hits:
ENSBTAP00000017862   0.0144   69-216   TROVE domain-like  

Ovis aries 76_3.1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOARP00000010157   2.09e-135   25-382   TROVE domain-like  
ENSOARP00000021236   6.67e-61   241-386,438-588,656-678   TROVE domain-like  
 
Weak hits:
ENSOARP00000010860   0.0602   253-354   TROVE domain-like  

Vicugna pacos 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSVPAP00000009584   9.15e-134   5-362   TROVE domain-like  
 
Weak hits:
ENSVPAP00000007771   0.0144   67-214   TROVE domain-like  

Tursiops truncatus 76_1 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTTRP00000008808   2.48e-134   4-361   TROVE domain-like  
ENSTTRP00000011840   1.44e-45   248-354,437-589   TROVE domain-like  

Mustela putorius furo 76_1.0 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMPUP00000004596   6.15e-135   5-362   TROVE domain-like  
ENSMPUP00000018013   7.06e-62   245-384,436-586,655-678   TROVE domain-like  

  1 2 3 4 5 6 7 8 9 10   Next Last
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Select to display   Genome       Domains   Proteins
No Yes ALL   10740 10740
No Yes Homo sapiens 76_38 Human 13 13
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 2 2
No Yes Gorilla gorilla 76_3.1 Western gorilla 3 3
No Yes Pongo abelii 76_2 Sumatran orangutan 2 2
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 2 2
No Yes Papio anubis 76 Olive baboon 3 3
No Yes Macaca mulatta 76_1 Rhesus monkey 3 3
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 5 5
No Yes Otolemur garnettii 76_3 Small-eared galago 2 2
No Yes Microcebus murinus 76_1 Gray mouse lemur 3 2
No Yes Rattus norvegicus 76_5.0 Norway rat 2 2
No Yes Mus musculus 76_38 House mouse 2 2
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 3 2
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 3 3
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 2 2
No Yes Cavia porcellus 76_3 Domestic guinea pig 4 4
No Yes Oryctolagus cuniculus 76_2 Rabbit 2 2
No Yes Ochotona princeps 76 American pika 2 2
No Yes Tupaia belangeri 76 Northern tree shrew 3 2
No Yes Sus scrofa 76_10.2 Pig 1 1
No Yes Bos taurus 76_3.1 Cattle 2 2
No Yes Ovis aries 76_3.1 Sheep 2 2
No Yes Vicugna pacos 76_1 Alpaca 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 2 2
No Yes Mustela putorius furo 76_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 76_1 Giant panda 2 2
No Yes Canis familiaris 76_3.1 Dog 2 2
No Yes Felis catus 76_6.2 Domestic cat 2 2
No Yes Equus caballus 76_2 Horse 2 2
No Yes Myotis lucifugus 76_2.0 Little brown bat 2 2
No Yes Pteropus vampyrus 76_1 Large flying fox 2 2
No Yes Sorex araneus 76_1 European shrew 3 2
No Yes Erinaceus europaeus 76 Western European hedgehog 2 2
No Yes Procavia capensis 76_1 Cape rock hyrax 3 2
No Yes Loxodonta africana 76_3 African savanna elephant 2 2
No Yes Echinops telfairi 76 Small Madagascar hedgehog 2 2
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 2 2
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 2 1
No Yes Macropus eugenii 76_1.0 Tammar wallaby 3 2
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 3 3
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 2 2
No Yes Ornithorhynchus anatinus 76_5 Platypus 2 2
No Yes Saccoglossus kowalevskii v3.0   2 2
No Yes Petromyzon marinus 76_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 76_2 Turkey 1 1
No Yes Gallus gallus 76_4 Chicken 1 1
No Yes Anas platyrhynchos 76_1.0 Mallard 1 1
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 1 1
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 1 1
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 1 1
No Yes Anolis carolinensis 76_2.0 Green anole 2 2
No Yes Xenopus laevis African clawed frog 10 10
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 76_1 Coelacanth 3 2
No Yes Lepisosteus oculatus 76 Spotted gar 1 1
No Yes Gadus morhua 76_1 Atlantic cod 2 2
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 3 3
No Yes Takifugu rubripes 76_4 Torafugu 4 4
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 1 1
No Yes Oryzias latipes 76_1 Japanese medaka 2 2
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 2 2
No Yes Poecilia formosa 76 Amazon molly 2 2
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 1 1
No Yes Astyanax mexicanus 76 Mexican tetra 3 3
No Yes Danio rerio 76_9 Zebrafish 6 6
No Yes Oikopleura dioica   1 1
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 4 4
No Yes Ciona intestinalis 76 Vase tunicate 2 2
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 3 3
No Yes Adineta vaga   4 4
No Yes Octopus bimaculoides 280   3 3
No Yes Crassostrea gigas 22 Pacific oyster 9 8
No Yes Lottia gigantea Owl limpet 2 2
No Yes Helobdella robusta   1 1
No Yes Capitella sp. I   2 2
No Yes Danaus plexippus OGS1.0 Monarch butterfly 1 1
No Yes Heliconius melpomene Postman butterfly 1 1
No Yes Bombyx mori Domestic silkworm 1 1
No Yes Nasonia vitripennis Jewel wasp 1 1
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 1 1
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 1 1
No Yes Linepithema humile v1.1 Argentine ant 1 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 1 1
No Yes Atta cephalotes v1.1   1 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 1 1
No Yes Drosophila grimshawi 1.3   1 1
No Yes Drosophila willistoni 1.3   1 1
No Yes Drosophila pseudoobscura 2.13   1 1
No Yes Drosophila persimilis 1.3   1 1
No Yes Drosophila suzukii   1 1
No Yes Drosophila yakuba 1.3   1 1
No Yes Drosophila simulans 1.3   1 1
No Yes Drosophila sechellia 1.3   1 1
No Yes Drosophila melanogaster 76_5 Fruit fly 5 5
No Yes Drosophila erecta 1.3   1 1
No Yes Drosophila ananassae 1.3   1 1
No Yes Drosophila virilis 1.2   1 1
No Yes Drosophila mojavensis 1.3   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 2 2
No Yes Culex pipiens quinquefasciatus Southern house mosquito 1 1
No Yes Anopheles darlingi 22 American malaria mosquito 1 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 1 1
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 1 1
No Yes Acyrthosiphon pisum Pea aphid 1 1
No Yes Rhodnius prolixus 22   1 1
No Yes Strigamia maritima 22   2 2
No Yes Tetranychus urticae Two-spotted spider mite 1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 1 1
No Yes Pristionchus pacificus   4 2
No Yes Meloidogyne incognita Southern root-knot nematode 1 1
No Yes Meloidogyne hapla   1 1
No Yes Onchocerca volvulus 22   5 2
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 2 1
No Yes Caenorhabditis japonica   1 1
No Yes Caenorhabditis brenneri   1 1
No Yes Caenorhabditis remanei   1 1
No Yes Caenorhabditis elegans 76_235 Roundworm 1 1
No Yes Caenorhabditis briggsae 2   1 1
No Yes Trichinella spiralis 22   2 2
No Yes Hymenolepis microstoma   1 1
No Yes Echinococcus multilocularis   1 1
No Yes Echinococcus granulosus   1 1
No Yes Taenia solium Pork tapeworm 1 1
No Yes Schistosoma mansoni   2 2
No Yes Mnemiopsis leidyi Sea walnut 1 1
No Yes Acropora digitifera v1.0   2 2
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1 1
No Yes Hydra vulgaris   1 1
No Yes Amphimedon queenslandica   2 2
No Yes Trichoplax adhaerens   1 1
No Yes Proterospongia sp. ATCC 50818   3 2
No Yes Monosiga brevicollis   2 2
No Yes Capsaspora owczarzaki ATCC 30864   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   2 1
No Yes Dictyostelium discoideum   1 1
No Yes Dictyostelium purpureum   1 1
No Yes Oryza meridionalis 22   1 1
No Yes Oryza punctata 22   2 2
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 1 1
No Yes Oryza sativa v193 Rice 1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   5 3
No Yes Cyanophora paradoxa   1 1
No Yes Leishmania mexicana 2.4   2 1
No Yes Leishmania major strain Friedlin   2 1
No Yes Leishmania infantum JPCM5 2.4   2 1
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   2 1
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Paramecium tetraurelia   3 3
No Yes Tetrahymena thermophila SB210 1   1 1
No Yes Leptolyngbya sp. PCC 7376   1 1
No Yes Acaryochloris marina MBIC11017   2 2
No Yes Geitlerinema sp. PCC 7407   1 1
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Rivularia sp. PCC 7116   2 2
No Yes Calothrix sp. PCC 7507   2 2
No Yes Nostoc sp. PCC 7107   2 2
No Yes Nostoc punctiforme PCC 73102   2 2
No Yes Nostoc sp. PCC 7524   1 1
No Yes Catenulispora acidiphila DSM 44928   1 1
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   1 1
No Yes Kitasatospora setae KM-6054   1 1
No Yes Streptomyces coelicolor A3(2)   1 1
No Yes Streptomyces sp. PAMC26508   1 1
No Yes Streptomyces flavogriseus ATCC 33331   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   1 1
No Yes Streptomyces bingchenggensis BCW-1   1 1
No Yes Streptomyces violaceusniger Tu 4113   1 1
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Streptomyces scabiei 87.22   2 2
No Yes Amycolatopsis mediterranei U32   1 1
No Yes Propionibacterium propionicum F0230a   1 1
No Yes Gordonia polyisoprenivorans VH2   1 1
No Yes Rhodococcus jostii RHA1   1 1
No Yes Rhodococcus opacus B4   1 1
No Yes Nocardia farcinica IFM 10152   1 1
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Cellulomonas flavigena DSM 20109   1 1
No Yes Herpetosiphon aurantiacus DSM 785   1 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Deinococcus radiodurans R1   1 1
No Yes Meiothermus silvanus DSM 9946   1 1
No Yes Meiothermus ruber DSM 1279   1 1
No Yes Thermus sp. CCB_US3_UF1   1 1
No Yes Clostridium clariflavum DSM 19732   1 1
No Yes Clostridium thermocellum ATCC 27405   1 1
No Yes Ruminococcus albus 7   1 1
No Yes Clostridium beijerinckii NCIMB 8052   1 1
No Yes Clostridium cellulovorans 743B   1 1
No Yes Paenibacillus mucilaginosus 3016   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Niastella koreensis GR20-10   1 1
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Flexibacter litoralis DSM 6794   1 1
No Yes Fibrella aestuarina   1 1
No Yes Cytophaga hutchinsonii ATCC 33406   1 1
No Yes Bacteroides thetaiotaomicron VPI-5482   1 1
No Yes Solitalea canadensis DSM 3403   1 1
No Yes Pedobacter heparinus DSM 2366   1 1
No Yes Simkania negevensis Z   1 1
No Yes Planctomyces brasiliensis DSM 5305   1 1
No Yes Planctomyces limnophilus DSM 3776   1 1
No Yes Rhodopirellula baltica SH 1   1 1
No Yes Pirellula staleyi DSM 6068   1 1
No Yes Granulicella mallensis MP5ACTX8   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Babela massiliensis   1 1
No Yes Sorangium cellulosum 'So ce 56'   2 2
No Yes Acidovorax avenae subsp. avenae ATCC 19860   1 1
No Yes Asticcacaulis excentricus CB 48   1 1
No Yes Sphingobium sp. SYK-6   1 1
No Yes Ruegeria pomeroyi DSS-3   1 1
No Yes Methylobacterium nodulans ORS 2060   1 1
No Yes Methylobacterium radiotolerans JCM 2831   1 1
No Yes Rhizobium etli CIAT 652   1 1
No Yes Agrobacterium radiobacter K84   1 1
No Yes Rhodomicrobium vannielii ATCC 17100   1 1
No Yes Bradyrhizobium sp. ORS 278   1 1
No Yes Hahella chejuensis KCTC 2396   1 1
No Yes Thiocystis violascens DSM 198   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   1 1
No Yes Pseudomonas fulva 12-X   1 1
No Yes Pseudomonas protegens Pf-5   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 2 2
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 1 1
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 1 1
No Yes Ascaris suum Victoria/Ghent Pig roundworm 1 1
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Chamaesiphon minutus PCC 6605   1 1
No Yes Synechococcus sp. PCC 7002   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Oscillatoria acuminata PCC 6304   1 1
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Cylindrospermum stagnale PCC 7417   1 1
No Yes Anabaena cylindrica PCC 7122   2 2
No Yes Nocardiopsis alba ATCC BAA-2165   1 1
No Yes Streptomyces rapamycinicus NRRL 5491   1 1
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Streptomyces fulvissimus DSM 40593   1 1
No Yes Amycolatopsis mediterranei RB   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis orientalis HCCB10007   1 1
No Yes Actinoplanes friuliensis DSM 7358   1 1
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Thermus oshimai JL-2   1 1
No Yes Clostridium thermocellum DSM 1313   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   1 1
No Yes Paenibacillus mucilaginosus KNP414   1 1
No Yes Paenibacillus mucilaginosus K02   1 1
No Yes Paenibacillus polymyxa SC2   1 1
No Yes Bacillus thuringiensis Bt407   1 1
No Yes Singulisphaera acidiphila DSM 18658   1 1
No Yes Sorangium cellulosum So0157-2   2 2
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Ralstonia pickettii 12J   1 1
No Yes Variovorax paradoxus EPS   1 1
No Yes Paracoccus aminophilus JCM 7686   1 1
No Yes Bradyrhizobium sp. BTAi1   1 1
No Yes Bradyrhizobium oligotrophicum S58   1 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   1 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   1 1
No Yes Pseudomonas protegens CHA0   1 1
No Yes Pseudomonas fluorescens R124   1 1
No Yes Pseudomonas fluorescens Pf0-1   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 14 14
No Yes Homo sapiens (NCBI version) Human 6 6
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 2 2
No Yes Heliconius numata (Incomplete)   1 1
No Yes Loa loa v3.3 (Request) Eye worm 4 4
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 2 2
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 2
No Yes Homo sapiens 69_37 Human 2 2
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 2 2
No Yes Gorilla gorilla 69_3.1 Western gorilla 2 2
No Yes Pongo abelii 69_2 Sumatran orangutan 2 2
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 2 2
No Yes Macaca mulatta 69_1 Rhesus monkey 2 2
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 2 2
No Yes Otolemur garnettii 69_3 Small-eared galago 2 2
No Yes Microcebus murinus 69_1 Gray mouse lemur 3 2
No Yes Rattus norvegicus 69_3.4 Norway rat 2 2
No Yes Mus musculus 69_38 House mouse 2 2
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 3 2
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 2 2
No Yes Cavia porcellus 69_3 Domestic guinea pig 4 4
No Yes Oryctolagus cuniculus 69_2 Rabbit 2 2
No Yes Ochotona princeps 69 American pika 2 2
No Yes Tupaia belangeri 69 Northern tree shrew 3 2
No Yes Sus scrofa 69_10.2 Pig 1 1
No Yes Bos taurus 69_3.1 Cattle 2 2
No Yes Vicugna pacos 69_1 Alpaca 1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 2 2
No Yes Mustela putorius furo 69_1.0 Domestic ferret 2 2
No Yes Ailuropoda melanoleuca 69_1 Giant panda 2 2
No Yes Canis familiaris 69_3.1 Dog 2 2
No Yes Felis catus 69 Domestic cat 2 2
No Yes Equus caballus 69_2 Horse 2 2
No Yes Myotis lucifugus 69_2.0 Little brown bat 2 2
No Yes Pteropus vampyrus 69_1 Large flying fox 2 2
No Yes Sorex araneus 69_1 European shrew 3 2
No Yes Erinaceus europaeus 69 Western European hedgehog 2 2
No Yes Procavia capensis 69_1 Cape rock hyrax 3 2
No Yes Loxodonta africana 69_3 African savanna elephant 2 2
No Yes Echinops telfairi 69 Small Madagascar hedgehog 2 2
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 2 2
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 2 1
No Yes Macropus eugenii 69_1.0 Tammar wallaby 3 2
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 2 2
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 2 2
No Yes Ornithorhynchus anatinus 69_5 Platypus 2 2
No Yes Petromyzon marinus 69_7.0 Sea lamprey 1 1
No Yes Meleagris gallopavo 69_2 Turkey 1 1
No Yes Gallus gallus 69_2 Chicken 1 1
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 1 1
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 1 1
No Yes Anolis carolinensis 69_2.0 Green anole 2 2
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 69_1 Coelacanth 2 1
No Yes Gadus morhua 69_1 Atlantic cod 2 2
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 3 3
No Yes Takifugu rubripes 69_4 Torafugu 2 2
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 1 1
No Yes Oryzias latipes 69_1 Japanese medaka 2 2
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 2 2
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 1 1
No Yes Danio rerio 69_9 Zebrafish 2 2
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 2 2
No Yes Ciona intestinalis 69 Vase tunicate 2 2
No Yes Drosophila melanogaster 69_5 Fruit fly 1 1
No Yes Caenorhabditis elegans 69_215 Roundworm 1 1
No Yes 3_050719R (meta-genome)   3 3
No Yes 4_050719Q (meta-genome)   6 6
No Yes 5_050719P (meta-genome)   7 7
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   2 2
No Yes Bath Hot Springs, planktonic community (meta-genome)   1 1
No Yes Combined (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   4 4
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   13 13
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   2 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   9 9
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   6 6
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes NCBI 2017_08 genome   6900 6882
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   3 3
No Yes Protozoadb 2010_08 (Protozoadb)   7 4
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   9 9
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   10 10
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   11 11
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   14 14
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   14 14
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   10 10
No Yes STRING v9.0.5 (STRING)   145 142
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   2 2
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   7 7
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   4 4
No Yes Uniprot 2018_03 genome   2444 2383
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   28 28
No Yes NCBI plasmid sequences (Plasmids)   8 8
No Yes NCBI viral sequences (Viral)   19 19
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   6 6
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   11 11
No Yes TargetDB (Targets)   7 7
No Yes The Salmonella enterica Pan-genome (meta-genome)   18 18
No Yes UniProt viral sequences (Viral)   9 9

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