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Agglutinin HPA-like superfamily domain assignments
in
Burkholderia mallei NCTC 10247

Assignment details

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Burkholderia mallei NCTC 10247 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|126446923|ref|YP_001079006.1|   0.0000418   41-91   Agglutinin HPA-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   5005 5005
No Yes Crassostrea gigas 22 Pacific oyster 9 8
No Yes Lottia gigantea Owl limpet 1 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1 1
No Yes Coprinopsis cinerea okayama7 130 v3   7 3
No Yes Amanita muscaria Koide v1.0 Fly agaric 9 3
No Yes Stereum hirsutum FP-91666 SS1 v1.0   3 1
No Yes Punctularia strigosozonata v1.0   3 1
No Yes Tulasnella calospora AL13/4D v1.0   19 7
No Yes Postia placenta   6 2
No Yes Wolfiporia cocos MD-104 SS10 v1.0   1 1
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Magnaporthe poae ATCC 64411 22   2 1
No Yes Verticillium albo-atrum VaMs.102   6 2
No Yes Verticillium dahliae VdLs.17   3 1
No Yes Fusarium graminearum   9 5
No Yes Nectria haematococca mpVI   3 1
No Yes Fusarium verticillioides 7600   6 2
No Yes Trichoderma citrinoviride v1.0   3 2
No Yes Trichoderma reesei 1.2   4 2
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   2 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   4 3
No Yes Botrytis cinerea B05.10   3 1
No Yes Didymella exigua CBS 183.55 v1.0   3 1
No Yes Leptosphaeria maculans 22   2 1
No Yes Cochliobolus lunatus m118 v2.0   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   5 2
No Yes Dothistroma septosporum   5 2
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   3 1
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   2 1
No Yes Aspergillus glaucus   3 1
No Yes Aspergillus wentii v1.0   6 2
No Yes Aspergillus oryzae RIB40   3 1
No Yes Aspergillus niger 22   2 1
No Yes Aspergillus niger ATCC 1015   2 1
No Yes Aspergillus flavus NRRL3357   3 1
No Yes Tuber melanosporum Vittad Perigord truffle 6 2
No Yes Dictyostelium discoideum   14 14
No Yes Dictyostelium purpureum   14 14
No Yes Entamoeba dispar 1.2   1 1
No Yes Entamoeba histolytica 1   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   2 1
No Yes Bigelowiella natans CCMP2755 22   1 1
No Yes Cyanophora paradoxa   1 1
No Yes Paramecium tetraurelia   54 50
No Yes Tetrahymena thermophila SB210 1   35 34
No Yes Neospora caninum   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   1 1
No Yes Herpetosiphon aurantiacus DSM 785   1 1
No Yes Megasphaera elsdenii DSM 20460   1 1
No Yes Ignavibacterium album JCM 16511   2 2
No Yes Deferribacter desulfuricans SSM1   1 1
No Yes Nautilia profundicola AmH   1 1
No Yes Nitratifractor salsuginis DSM 16511   1 1
No Yes Desulfobulbus propionicus DSM 2032   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Burkholderia thailandensis E264   1 1
No Yes Burkholderia pseudomallei 1106a   1 1
No Yes Magnetococcus marinus MC-1   1 1
No Yes Dinoroseobacter shibae DFL 12   1 1
No Yes Phaeobacter gallaeciensis 2.10   1 1
No Yes Jannaschia sp. CCS1   1 1
No Yes Ruegeria sp. TM1040   1 1
No Yes Ruegeria pomeroyi DSS-3   1 1
No Yes Ketogulonicigenium vulgare Y25   2 2
No Yes Ketogulonigenium vulgarum WSH-001   2 2
No Yes Rhodobacter capsulatus SB 1003   1 1
No Yes Paracoccus denitrificans PD1222   1 1
No Yes Shewanella denitrificans OS217   1 1
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Coccidioides immitis H538.4   1 1
No Yes Neospora caninum Nc-Liverpool 6.2   1 1
No Yes Streptomyces fulvissimus DSM 40593   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   1 1
No Yes Bacillus thuringiensis HD-789   2 2
No Yes Bacillus thuringiensis MC28   1 1
No Yes Bacillus thuringiensis serovar chinensis CT-43   1 1
No Yes Bacillus thuringiensis Bt407   1 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   1 1
No Yes Singulisphaera acidiphila DSM 18658   1 1
No Yes Burkholderia thailandensis MSMB121   1 1
No Yes Burkholderia pseudomallei MSHR305   1 1
No Yes Burkholderia pseudomallei NCTC 13179   1 1
No Yes Burkholderia pseudomallei BPC006   1 1
No Yes Burkholderia pseudomallei 1026b   1 1
No Yes Burkholderia pseudomallei 1710b   1 1
No Yes Burkholderia pseudomallei K96243   1 1
No Yes Burkholderia mallei NCTC 10229   1 1
No Yes Burkholderia mallei NCTC 10247   1 1
No Yes Phaeobacter gallaeciensis DSM 17395   1 1
No Yes Phaeobacter gallaeciensis DSM 26640   1 1
No Yes Leisingera methylohalidivorans DSM 14336   1 1
No Yes Octadecabacter antarcticus 307   2 2
No Yes Octadecabacter arcticus 238   1 1
No Yes Paracoccus aminophilus JCM 7686   1 1
No Yes 2_050719S (meta-genome)   1 1
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   4 4
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   2 2
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes NCBI 2017_08 genome   2348 2229
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   4 3
No Yes Protozoadb 2010_08 (Protozoadb)   4 4
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   3 3
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   2 2
No Yes STRING v9.0.5 (STRING)   139 117
No Yes Uniprot 2018_03 genome   1694 1347
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   29 29
No Yes NCBI plasmid sequences (Plasmids)   2 2
No Yes NCBI viral sequences (Viral)   26 26
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   45 45
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   38 38
No Yes UniProt viral sequences (Viral)   2 2

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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