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Pentapeptide repeat-like superfamily domain assignments
in
Capsaspora owczarzaki ATCC 30864

Assignment details

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Capsaspora owczarzaki ATCC 30864 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
CAOG_04978T0   0.000017   228-269   Pentapeptide repeats  
CAOG_05346T0   0.000000000116   1500-1554   Pentapeptide repeats  
 
Weak hits:
CAOG_05633T0   0.0589   899-926   Pentapeptide repeats  

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Select to display   Genome       Domains   Proteins
No Yes ALL   232794 232794
No Yes Homo sapiens 76_38 Human 16 16
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 7 7
No Yes Gorilla gorilla 76_3.1 Western gorilla 10 10
No Yes Pongo abelii 76_2 Sumatran orangutan 9 9
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 9 9
No Yes Papio anubis 76 Olive baboon 5 5
No Yes Macaca mulatta 76_1 Rhesus monkey 14 11
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 9 9
No Yes Otolemur garnettii 76_3 Small-eared galago 5 5
No Yes Microcebus murinus 76_1 Gray mouse lemur 4 4
No Yes Rattus norvegicus 76_5.0 Norway rat 8 8
No Yes Mus musculus 76_38 House mouse 12 12
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 5 5
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 5 5
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 7 7
No Yes Cavia porcellus 76_3 Domestic guinea pig 5 5
No Yes Oryctolagus cuniculus 76_2 Rabbit 5 5
No Yes Ochotona princeps 76 American pika 5 5
No Yes Tupaia belangeri 76 Northern tree shrew 3 3
No Yes Sus scrofa 76_10.2 Pig 4 4
No Yes Bos taurus 76_3.1 Cattle 6 6
No Yes Ovis aries 76_3.1 Sheep 6 6
No Yes Vicugna pacos 76_1 Alpaca 4 4
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 6 6
No Yes Mustela putorius furo 76_1.0 Domestic ferret 6 5
No Yes Ailuropoda melanoleuca 76_1 Giant panda 6 6
No Yes Canis familiaris 76_3.1 Dog 7 7
No Yes Felis catus 76_6.2 Domestic cat 10 8
No Yes Equus caballus 76_2 Horse 6 6
No Yes Myotis lucifugus 76_2.0 Little brown bat 6 6
No Yes Pteropus vampyrus 76_1 Large flying fox 5 5
No Yes Sorex araneus 76_1 European shrew 4 4
No Yes Erinaceus europaeus 76 Western European hedgehog 3 3
No Yes Procavia capensis 76_1 Cape rock hyrax 3 3
No Yes Loxodonta africana 76_3 African savanna elephant 5 5
No Yes Echinops telfairi 76 Small Madagascar hedgehog 4 4
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 9 9
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 2 2
No Yes Macropus eugenii 76_1.0 Tammar wallaby 4 4
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 7 7
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 9 9
No Yes Ornithorhynchus anatinus 76_5 Platypus 4 4
No Yes Saccoglossus kowalevskii v3.0   97 70
No Yes Petromyzon marinus 76_7.0 Sea lamprey 7 6
No Yes Meleagris gallopavo 76_2 Turkey 7 7
No Yes Gallus gallus 76_4 Chicken 9 6
No Yes Anas platyrhynchos 76_1.0 Mallard 5 5
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 4 4
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 5 5
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 10 7
No Yes Anolis carolinensis 76_2.0 Green anole 3 3
No Yes Xenopus laevis African clawed frog 2 2
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 5 5
No Yes Latimeria chalumnae 76_1 Coelacanth 8 7
No Yes Lepisosteus oculatus 76 Spotted gar 7 7
No Yes Gadus morhua 76_1 Atlantic cod 8 8
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 11 11
No Yes Takifugu rubripes 76_4 Torafugu 9 9
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 8 8
No Yes Oryzias latipes 76_1 Japanese medaka 10 10
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 10 8
No Yes Poecilia formosa 76 Amazon molly 7 7
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 9 9
No Yes Astyanax mexicanus 76 Mexican tetra 6 6
No Yes Danio rerio 76_9 Zebrafish 13 13
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 5 5
No Yes Ciona intestinalis 76 Vase tunicate 3 3
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 13 10
No Yes Adineta vaga   14 13
No Yes Octopus bimaculoides 280   12 9
No Yes Crassostrea gigas 22 Pacific oyster 1 1
No Yes Lottia gigantea Owl limpet 53 41
No Yes Helobdella robusta   10 8
No Yes Capitella sp. I   19 17
No Yes Danaus plexippus OGS1.0 Monarch butterfly 2 2
No Yes Heliconius melpomene Postman butterfly 2 2
No Yes Bombyx mori Domestic silkworm 2 2
No Yes Nasonia vitripennis Jewel wasp 2 2
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 2 2
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 5 5
No Yes Linepithema humile v1.1 Argentine ant 2 2
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 3 3
No Yes Solenopsis invicta v.2.2.3 Red fire ant 2 2
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 2 2
No Yes Atta cephalotes v1.1   2 2
No Yes Camponotus floridanus v3.3 Florida carpenter ant 6 6
No Yes Lucilia cuprina Australian sheep blowfly 3 3
No Yes Drosophila grimshawi 1.3   1 1
No Yes Drosophila willistoni 1.3   1 1
No Yes Drosophila pseudoobscura 2.13   2 2
No Yes Drosophila persimilis 1.3   2 2
No Yes Drosophila suzukii   1 1
No Yes Drosophila yakuba 1.3   1 1
No Yes Drosophila simulans 1.3   2 2
No Yes Drosophila sechellia 1.3   3 3
No Yes Drosophila melanogaster 76_5 Fruit fly 2 2
No Yes Drosophila erecta 1.3   1 1
No Yes Drosophila ananassae 1.3   1 1
No Yes Drosophila virilis 1.2   1 1
No Yes Drosophila mojavensis 1.3   2 2
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 2 2
No Yes Culex pipiens quinquefasciatus Southern house mosquito 4 4
No Yes Anopheles gambiae 49_3j African malaria mosquito 1 1
No Yes Tribolium castaneum 3.0 Red flour beetle 2 2
No Yes Pediculus humanus corporis (Early assembly) Human body louse 2 2
No Yes Rhodnius prolixus 22   3 3
No Yes Daphnia pulex Common water flea 13 13
No Yes Strigamia maritima 22   6 6
No Yes Sarcoptes scabiei   2 2
No Yes Tetranychus urticae Two-spotted spider mite 1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 12 10
No Yes Meloidogyne incognita Southern root-knot nematode 2 2
No Yes Onchocerca volvulus 22   4 4
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 1 1
No Yes Caenorhabditis japonica   18 14
No Yes Caenorhabditis remanei   2 2
No Yes Caenorhabditis briggsae 2   4 3
No Yes Mnemiopsis leidyi Sea walnut 4 4
No Yes Thelohanellus kitauei   1 1
No Yes Acropora digitifera v1.0   1 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 77 60
No Yes Hydra vulgaris   9 8
No Yes Amphimedon queenslandica   8 5
No Yes Proterospongia sp. ATCC 50818   17 6
No Yes Monosiga brevicollis   7 6
No Yes Sphaeroforma arctica JP610   5 5
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Mortierella verticillata NRRL 6337   2 2
No Yes Phycomyces blakesleeanus   1 1
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Melampsora laricis-populina   1 1
No Yes Rhodotorula graminis WP1 v1.0   1 1
No Yes Microbotryum violaceum 22   1 1
No Yes Piloderma croceum F 1598 v1.0   1 1
No Yes Amanita muscaria Koide v1.0 Fly agaric 1 1
No Yes Heterobasidion annosum   1 1
No Yes Postia placenta   2 2
No Yes Wolfiporia cocos MD-104 SS10 v1.0   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   1 1
No Yes Neurospora tetrasperma   1 1
No Yes Neurospora discreta FGSC 8579   1 1
No Yes Trichoderma asperellum CBS 433.97 v1.0   1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   1 1
No Yes Amorphotheca resinae v1.0 Creosote fungus 1 1
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Cochliobolus victoriae FI3 v1.0   2 2
No Yes Mycosphaerella graminicola IPO323   1 1
No Yes Zasmidium cellare ATCC 36951 v1.0   2 2
No Yes Dothistroma septosporum   2 2
No Yes Septoria musiva v1.0   3 2
No Yes Mycosphaerella fijiensis CIRAD86   15 15
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   2 2
No Yes Ajellomyces dermatitidis SLH14081   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Uncinocarpus reesii 1704   1 1
No Yes Aspergillus zonatus v1.0   1 1
No Yes Aspergillus acidus v1.0   1 1
No Yes Aspergillus fumigatus Af293   1 1
No Yes Aspergillus brasiliensis v1.0   1 1
No Yes Aspergillus nidulans FGSC A4   1 1
No Yes Aspergillus sydowii v1.0   1 1
No Yes Aspergillus versicolor v1.0   1 1
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Neosartorya fischeri NRRL 181   1 1
No Yes Aspergillus tubingensis v1.0   1 1
No Yes Aspergillus oryzae RIB40   1 1
No Yes Aspergillus niger 22   1 1
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Dekkera bruxellensis CBS 2499 v2.0   1 1
No Yes Lodderomyces elongisporus NRRL YB-4239   1 1
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   1 1
No Yes Catenaria anguillulae PL171 v1.0   1 1
No Yes Allomyces macrogynus ATCC 38327   2 2
No Yes Dictyostelium discoideum   5 5
No Yes Dictyostelium purpureum   7 7
No Yes Entamoeba invadens 1.2   16 12
No Yes Selaginella moellendorffii   9 9
No Yes Pinus taeda Loblolly pine 3 3
No Yes Picea abies Norway spruce 10 7
No Yes Eucalyptus grandis v201 Rose gum 14 14
No Yes Theobroma cacao B97-61/B2 v1 Cacao 4 4
No Yes Gossypium raimondii v221   23 23
No Yes Citrus clementina v165   10 9
No Yes Citrus sinensis v154 Sweet orange 13 13
No Yes Thellungiella halophila v173   6 6
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 4 4
No Yes Capsella rubella v183   4 4
No Yes Arabidopsis lyrata Lyrate rockcress 4 4
No Yes Arabidopsis thaliana 10 Thale cress 9 9
No Yes Carica papaya Papaya 3 3
No Yes Medicago truncatula Barrel medic 5 5
No Yes Phaseolus vulgaris v186 French bean 4 4
No Yes Glycine max v109 Soybean 13 13
No Yes Cucumis sativus v122 Cucumber 5 5
No Yes Fragaria vesca Wild strawberry 14 12
No Yes Malus domestica v196 Apple 25 24
No Yes Prunus persica v139 Peach 5 5
No Yes Linum usitatissimum v200 Flax 7 7
No Yes Manihot esculenta v147 Cassava 4 4
No Yes Populus trichocarpa v156 Black cottonwood 9 9
No Yes Vitis vinifera Wine grape 5 5
No Yes Mimulus guttatus v140 Spotted monkey flower 4 4
No Yes Solanum lycopersicum v.2.3 Tomato 4 4
No Yes Solanum tuberosum Potato 9 8
No Yes Actinidia chinensis Hongyang   4 4
No Yes Aquilegia coerulea v195   16 16
No Yes Triticum urartu 22   4 3
No Yes Triticum aestivum 22 Bread wheat 12 12
No Yes Aegilops tauschii 22   4 4
No Yes Brachypodium distachyon Stiff brome 5 5
No Yes Oryza barthii 22 African wild rice 8 8
No Yes Oryza meridionalis 22   5 5
No Yes Oryza glumaepatula 22   9 9
No Yes Oryza glaberrima African rice 3 3
No Yes Oryza punctata 22   5 5
No Yes Oryza nivara 22   5 5
No Yes Oryza brachyantha 22 Malo sina 6 5
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 6 6
No Yes Oryza sativa v193 Rice 6 6
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 8 8
No Yes Panicum virgatum v202 Switchgrass 7 7
No Yes Setaria italica v164 Foxtail millet 5 5
No Yes Zea mays subsp. mays Maize 9 9
No Yes Zea mays v181 Maize 9 9
No Yes Sorghum bicolor Sorghum 4 4
No Yes Musa balbisiana Balbis banana 5 4
No Yes Musa acuminata 22 Wild Malaysian banana 4 4
No Yes Amborella trichopoda 22   4 4
No Yes Physcomitrella patens   12 12
No Yes Coccomyxa subellipsoidea sp. C-169 v2   2 2
No Yes Asterochloris sp. Cgr/DA1pho v1.0   3 3
No Yes Chlorella variabilis sp. NC64A   4 4
No Yes Chlorella vulgaris   3 3
No Yes Volvox carteri f. nagariensis   7 7
No Yes Volvox carteri v199   8 8
No Yes Chlamydomonas reinhardtii 4.0   4 4
No Yes Ostreococcus sp. RCC809   6 6
No Yes Ostreococcus lucimarinus CCE9901   5 5
No Yes Ostreococcus tauri   6 6
No Yes Bathycoccus prasinos   6 6
No Yes Micromonas sp. RCC299   13 9
No Yes Micromonas pusilla CCMP1545 v3.0   12 11
No Yes Cyanidioschyzon merolae strain 10D 22   4 4
No Yes Cyanidioschyzon merolae   4 4
No Yes Porphyridium purpureum 02_2012   18 12
No Yes Thecamonas trahens ATCC 50062   3 3
No Yes Bigelowiella natans CCMP2755 22   4 4
No Yes Cyanophora paradoxa   27 27
No Yes Leishmania mexicana 2.4   2 2
No Yes Leishmania major strain Friedlin   2 2
No Yes Leishmania infantum JPCM5 2.4   2 2
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   2 2
No Yes Trypanosoma vivax   2 2
No Yes Trypanosoma cruzi strain CL Brener   3 3
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   3 3
No Yes Trypanosoma brucei TREU927 v4.1   3 3
No Yes Ectocarpus siliculosus   5 5
No Yes Aureococcus anophagefferens   2 2
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Phytophthora capsici   1 1
No Yes Phaeodactylum tricornutumCCAP 1055/1   3 3
No Yes Fragilariopsis cylindrus   5 5
No Yes Thalassiosira pseudonana CCMP1335   3 3
No Yes Paramecium tetraurelia   79 79
No Yes Tetrahymena thermophila SB210 1   4 2
No Yes Ichthyophthirius multifiliis strain G5   1 1
No Yes Neospora caninum   3 1
No Yes Toxoplasma gondii VEG   1 1
No Yes Toxoplasma gondii ME49   1 1
No Yes Theileria annulata   1 1
No Yes Plasmodium falciparum 3D7   13 13
No Yes Plasmodium vivax SaI-1 7.0   8 8
No Yes Plasmodium knowlesi strain H   6 6
No Yes Plasmodium yoelii ssp. yoelii 1   9 9
No Yes Plasmodium chabaudi   3 3
No Yes Plasmodium berghei ANKA   6 5
No Yes Symbiodinium minutum clade B1 v1.2   11 9
No Yes Naegleria gruberi   24 16
No Yes Trichomonas vaginalis   5 5
No Yes Guillardia theta CCMP2712 v1.0   23 9
No Yes Emiliania huxleyi CCMP1516   137 101
No Yes Leptolyngbya sp. PCC 7376   30 20
No Yes Pseudanabaena sp. PCC 7367   85 58
No Yes Acaryochloris marina MBIC11017   111 85
No Yes Synechocystis sp. PCC 6803   22 17
No Yes Thermosynechococcus sp. NK55   20 15
No Yes Thermosynechococcus elongatus BP-1   21 15
No Yes Synechococcus sp. PCC 7502   33 21
No Yes Synechococcus sp. PCC 6312   25 19
No Yes Synechococcus sp. CC9311   6 6
No Yes Synechococcus elongatus PCC 7942   10 10
No Yes Prochlorococcus marinus str. MIT 9515   4 4
No Yes Microcoleus sp. PCC 7113   109 77
No Yes Trichodesmium erythraeum IMS101   39 30
No Yes Geitlerinema sp. PCC 7407   48 37
No Yes Cyanothece sp. PCC 8802   38 30
No Yes Gloeocapsa sp. PCC 7428   42 33
No Yes cyanobacterium UCYN-A   2 2
No Yes Halothece sp. PCC 7418   18 13
No Yes Microcystis aeruginosa NIES-843   21 18
No Yes Gloeobacter violaceus PCC 7421   31 23
No Yes Rivularia sp. PCC 7116   78 57
No Yes Calothrix sp. PCC 7507   38 32
No Yes Anabaena variabilis ATCC 29413   39 34
No Yes 'Nostoc azollae' 0708   21 18
No Yes Nostoc sp. PCC 7107   38 32
No Yes Nostoc punctiforme PCC 73102   56 43
No Yes Nostoc sp. PCC 7120   45 36
No Yes Nostoc sp. PCC 7524   30 24
No Yes Anabaena sp. 90   30 25
No Yes Mycoplasma leachii 99/014/6   2 2
No Yes Mycoplasma mycoides subsp. capri LC str. 95010   1 1
No Yes Mycoplasma bovis HB0801   1 1
No Yes Mycoplasma pulmonis UAB CTIP   1 1
No Yes Conexibacter woesei DSM 14684   1 1
No Yes Eggerthella sp. YY7918   2 2
No Yes Eggerthella lenta DSM 2243   2 2
No Yes Ilumatobacter coccineus   1 1
No Yes Acidimicrobium ferrooxidans DSM 10331   1 1
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Nakamurella multipartita DSM 44233   4 4
No Yes Acidothermus cellulolyticus 11B   2 2
No Yes Modestobacter marinus   4 4
No Yes Blastococcus saxobsidens DD2   2 2
No Yes Geodermatophilus obscurus DSM 43160   4 4
No Yes Kineococcus radiotolerans SRS30216   2 2
No Yes Catenulispora acidiphila DSM 44928   4 4
No Yes Stackebrandtia nassauensis DSM 44728   7 7
No Yes Frankia symbiont of Datisca glomerata   7 7
No Yes Frankia sp. EAN1pec   13 12
No Yes Frankia alni ACN14a   6 5
No Yes Thermobifida fusca YX   1 1
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   2 2
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   8 7
No Yes Kitasatospora setae KM-6054   6 6
No Yes Streptomyces coelicolor A3(2)   2 2
No Yes Streptomyces sp. PAMC26508   2 2
No Yes Streptomyces flavogriseus ATCC 33331   2 2
No Yes Streptomyces sp. SirexAA-E   2 2
No Yes Streptomyces griseus subsp. griseus NBRC 13350   2 2
No Yes Streptomyces bingchenggensis BCW-1   5 5
No Yes Streptomyces violaceusniger Tu 4113   5 5
No Yes Streptomyces avermitilis MA-4680   4 4
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   3 3
No Yes Streptomyces scabiei 87.22   3 3
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   4 4
No Yes Actinosynnema mirum DSM 43827   5 5
No Yes Saccharomonospora viridis DSM 43017   1 1
No Yes Pseudonocardia dioxanivorans CB1190   4 4
No Yes Saccharopolyspora erythraea NRRL 2338   5 5
No Yes Amycolatopsis mediterranei U32   6 6
No Yes Kribbella flavida DSM 17836   6 6
No Yes Nocardioides sp. JS614   4 4
No Yes Propionibacterium propionicum F0230a   1 1
No Yes Microlunatus phosphovorus NM-1   5 4
No Yes Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1   1 1
No Yes Salinispora arenicola CNS-205   7 7
No Yes Salinispora tropica CNB-440   5 5
No Yes Verrucosispora maris AB-18-032   3 3
No Yes Micromonospora sp. L5   4 4
No Yes Micromonospora aurantiaca ATCC 27029   7 7
No Yes Actinoplanes sp. N902-109   6 6
No Yes Actinoplanes sp. SE50/110   4 4
No Yes Actinoplanes missouriensis 431   5 5
No Yes Segniliparus rotundus DSM 44985   1 1
No Yes Tsukamurella paurometabola DSM 20162   1 1
No Yes Gordonia polyisoprenivorans VH2   3 2
No Yes Rhodococcus jostii RHA1   6 6
No Yes Rhodococcus equi 103S   5 5
No Yes Rhodococcus opacus B4   2 2
No Yes Rhodococcus erythropolis PR4   5 4
No Yes Nocardia cyriacigeorgica GUH-2   2 2
No Yes Amycolicicoccus subflavus DQS3-9A1   1 1
No Yes Mycobacterium abscessus ATCC 19977   1 1
No Yes Mycobacterium sp. JLS   1 1
No Yes Mycobacterium intracellulare ATCC 13950   1 1
No Yes Mycobacterium avium 104   1 1
No Yes Mycobacterium vanbaalenii PYR-1   2 2
No Yes Mycobacterium canettii CIPT 140010059   1 1
No Yes Mycobacterium africanum GM041182   1 1
No Yes Mycobacterium tuberculosis KZN 1435   1 1
No Yes Mycobacterium tuberculosis   1 1
No Yes Mycobacterium bovis BCG str. Pasteur 1173P2   1 1
No Yes Mycobacterium rhodesiae NBB3   1 1
No Yes Mycobacterium ulcerans Agy99   1 1
No Yes Mycobacterium gilvum PYR-GCK   1 1
No Yes Mycobacterium chubuense NBB4   1 1
No Yes Mycobacterium marinum M   1 1
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Corynebacterium variabile DSM 44702   1 1
No Yes Corynebacterium glutamicum R   1 1
No Yes Sanguibacter keddieii DSM 10542   3 3
No Yes Kytococcus sedentarius DSM 20547   1 1
No Yes Beutenbergia cavernae DSM 12333   5 5
No Yes Microbacterium testaceum StLB037   1 1
No Yes Clavibacter michiganensis subsp. michiganensis NCPPB 382   1 1
No Yes Jonesia denitrificans DSM 20603   1 1
No Yes Intrasporangium calvum DSM 43043   3 3
No Yes Brachybacterium faecium DSM 4810   1 1
No Yes Isoptericola variabilis 225   2 2
No Yes Xylanimonas cellulosilytica DSM 15894   2 2
No Yes Cellulomonas flavigena DSM 20109   3 3
No Yes Cellulomonas fimi ATCC 484   3 3
No Yes [Cellvibrio] gilvus ATCC 13127   3 3
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Arthrobacter chlorophenolicus A6   3 3
No Yes Arthrobacter aurescens TC1   2 2
No Yes Kocuria rhizophila DC2201   1 1
No Yes Rothia mucilaginosa DY-18   1 1
No Yes Rothia dentocariosa ATCC 17931   1 1
No Yes Arthrobacter sp. Rue61a   2 2
No Yes Arthrobacter sp. FB24   1 1
No Yes Bifidobacterium animalis subsp. lactis Bl-04   1 1
No Yes Bifidobacterium dentium Bd1   1 1
No Yes Actinomyces sp. F0330   1 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   4 3
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Sphaerobacter thermophilus DSM 20745   1 1
No Yes Herpetosiphon aurantiacus DSM 785   4 4
No Yes Chloroflexus sp. MS-G   2 1
No Yes Chloroflexus sp. Y-400-fl   2 1
No Yes Chloroflexus aggregans DSM 9485   2 1
No Yes Chloroflexus aurantiacus J-10-fl   2 1
No Yes Deinococcus gobiensis I-0   1 1
No Yes Deinococcus radiodurans R1   1 1
No Yes Acidaminococcus intestini RyC-MR95   2 1
No Yes Acidaminococcus fermentans DSM 20731   2 1
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   2 2
No Yes Erysipelothrix rhusiopathiae str. Fujisawa   1 1
No Yes Natranaerobius thermophilus JW/NM-WN-LF   1 1
No Yes Clostridium clariflavum DSM 19732   3 3
No Yes Eubacterium siraeum   2 2
No Yes Clostridium cellulolyticum H10   1 1
No Yes Faecalibacterium prausnitzii   2 2
No Yes Ruminococcus albus 7   2 2
No Yes Desulfosporosinus acidiphilus SJ4   3 3
No Yes Desulfosporosinus orientis DSM 765   2 2
No Yes Dehalobacter sp. DCA   2 2
No Yes Dehalobacter sp. CF   2 2
No Yes Syntrophobotulus glycolicus DSM 8271   1 1
No Yes Desulfitobacterium hafniense Y51   1 1
No Yes Desulfitobacterium dehalogenans ATCC 51507   1 1
No Yes Desulfotomaculum acetoxidans DSM 771   3 1
No Yes Desulfotomaculum ruminis DSM 2154   1 1
No Yes Acetobacterium woodii DSM 1030   3 3
No Yes Eubacterium limosum KIST612   2 2
No Yes Clostridium difficile 630   3 3
No Yes Clostridium sticklandii DSM 519   1 1
No Yes Clostridium saccharolyticum WM1   2 2
No Yes Clostridium phytofermentans ISDg   1 1
No Yes Clostridium lentocellum DSM 5427   3 3
No Yes Alkaliphilus oremlandii OhILAs   2 2
No Yes Alkaliphilus metalliredigens QYMF   2 2
No Yes Clostridium sp. BNL1100   2 2
No Yes Clostridium ljungdahlii DSM 13528   2 2
No Yes Clostridium kluyveri DSM 555   1 1
No Yes Clostridium beijerinckii NCIMB 8052   8 8
No Yes Clostridium tetani E88   1 1
No Yes Clostridium perfringens ATCC 13124   2 2
No Yes Clostridium cellulovorans 743B   4 4
No Yes Clostridium botulinum A str. ATCC 3502   3 3
No Yes Clostridium acetobutylicum ATCC 824   5 5
No Yes Carnobacterium sp. 17-4   1 1
No Yes Carnobacterium sp. WN1359   1 1
No Yes Enterococcus sp. 7L76   1 1
No Yes Enterococcus hirae ATCC 9790   1 1
No Yes Enterococcus faecium Aus0004   2 2
No Yes Enterococcus faecalis 62   1 1
No Yes Leuconostoc gasicomitatum LMG 18811   1 1
No Yes Lactobacillus sakei subsp. sakei 23K   1 1
No Yes Lactobacillus plantarum JDM1   1 1
No Yes Lactobacillus buchneri NRRL B-30929   1 1
No Yes Lactobacillus buchneri   1 1
No Yes Lactobacillus brevis ATCC 367   2 2
No Yes Pediococcus pentosaceus ATCC 25745   1 1
No Yes Lactococcus garvieae ATCC 49156   2 2
No Yes Lactococcus lactis subsp. cremoris MG1363   1 1
No Yes Streptococcus sp. I-P16   1 1
No Yes Streptococcus infantarius subsp. infantarius CJ18   1 1
No Yes Exiguobacterium sp. MH3   2 2
No Yes Exiguobacterium sp. AT1b   2 2
No Yes Exiguobacterium sibiricum 255-15   2 2
No Yes Brevibacillus brevis NBRC 100599   6 6
No Yes Paenibacillus sp. JDR-2   9 7
No Yes Paenibacillus terrae HPL-003   5 5
No Yes Paenibacillus mucilaginosus 3016   7 5
No Yes Paenibacillus polymyxa M1   6 6
No Yes Listeria welshimeri serovar 6b str. SLCC5334   1 1
No Yes Listeria innocua Clip11262   1 1
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   1 1
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   1 1
No Yes Listeria ivanovii subsp. ivanovii PAM 55   1 1
No Yes Lysinibacillus sphaericus C3-41   3 3
No Yes Oceanobacillus iheyensis HTE831   1 1
No Yes Bacillus sp. JS   2 2
No Yes Bacillus sp. 1NLA3E   2 2
No Yes Bacillus amyloliquefaciens FZB42   2 2
No Yes Bacillus atrophaeus 1942   2 2
No Yes Bacillus subtilis subsp. subtilis str. 168   2 2
No Yes Bacillus halodurans C-125   1 1
No Yes Bacillus weihenstephanensis KBAB4   3 3
No Yes Bacillus thuringiensis str. Al Hakam   3 3
No Yes Bacillus cereus 03BB102   4 4
No Yes Bacillus anthracis str. A0248   2 2
No Yes Bacillus pseudofirmus OF4   1 1
No Yes Bacillus clausii KSM-K16   2 2
No Yes Bacillus cellulosilyticus DSM 2522   1 1
No Yes Bacillus pumilus SAFR-032   1 1
No Yes Bacillus megaterium DSM 319   1 1
No Yes Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305   1 1
No Yes Staphylococcus lugdunensis HKU09-01   1 1
No Yes Staphylococcus haemolyticus JCSC1435   1 1
No Yes Staphylococcus epidermidis RP62A   1 1
No Yes Gemmatimonas aurantiaca T-27   2 2
No Yes Pelodictyon phaeoclathratiforme BU-1   9 7
No Yes Chlorobium luteolum DSM 273   5 3
No Yes Chlorobium chlorochromatii CaD3   4 3
No Yes Chlorobium phaeobacteroides DSM 266   9 7
No Yes Chlorobium phaeovibrioides DSM 265   4 2
No Yes Chlorobium limicola DSM 245   6 4
No Yes Chlorobaculum parvum NCIB 8327   6 4
No Yes Chlorobium tepidum TLS   7 4
No Yes Chloroherpeton thalassium ATCC 35110   1 1
No Yes Prosthecochloris aestuarii DSM 271   5 3
No Yes Haliscomenobacter hydrossis DSM 1100   3 3
No Yes Saprospira grandis str. Lewin   2 2
No Yes Niastella koreensis GR20-10   2 2
No Yes Salinibacter ruber M8   1 1
No Yes Flexibacter litoralis DSM 6794   1 1
No Yes Belliella baltica DSM 15883   1 1
No Yes Cyclobacterium marinum DSM 745   1 1
No Yes Marivirga tractuosa DSM 4126   2 2
No Yes Fibrella aestuarina   5 3
No Yes Leadbetterella byssophila DSM 17132   1 1
No Yes Dyadobacter fermentans DSM 18053   4 4
No Yes Cytophaga hutchinsonii ATCC 33406   2 2
No Yes Spirosoma linguale DSM 74   2 2
No Yes Parabacteroides distasonis ATCC 8503   1 1
No Yes Paludibacter propionicigenes WB4   1 1
No Yes Bacteroides sp. CF50   1 1
No Yes Alistipes finegoldii DSM 17242   2 2
No Yes Bacteroides thetaiotaomicron VPI-5482   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Pedobacter saltans DSM 12145   1 1
No Yes Solitalea canadensis DSM 3403   2 2
No Yes Pedobacter heparinus DSM 2366   2 1
No Yes Fluviicola taffensis DSM 16823   4 3
No Yes Owenweeksia hongkongensis DSM 17368   1 1
No Yes Zunongwangia profunda SM-A87   1 1
No Yes Krokinobacter sp. 4H-3-7-5   1 1
No Yes Lacinutrix sp. 5H-3-7-4   1 1
No Yes Maribacter sp. HTCC2170   1 1
No Yes Croceibacter atlanticus HTCC2559   2 2
No Yes Aequorivita sublithincola DSM 14238   1 1
No Yes Zobellia galactanivorans   1 1
No Yes Muricauda ruestringensis DSM 13258   4 3
No Yes Cellulophaga algicola DSM 14237   1 1
No Yes Cellulophaga lytica DSM 7489   1 1
No Yes Flavobacteriaceae bacterium 3519-10   1 1
No Yes Polaribacter sp. MED152   1 1
No Yes Flavobacterium indicum GPTSA100-9   1 1
No Yes Flavobacterium psychrophilum JIP02/86   1 1
No Yes Flavobacterium branchiophilum FL-15   1 1
No Yes Flavobacterium columnare ATCC 49512   1 1
No Yes Flavobacterium johnsoniae UW101   4 4
No Yes Fibrobacter succinogenes subsp. succinogenes S85   3 1
No Yes Candidatus Protochlamydia amoebophila UWE25   5 5
No Yes Simkania negevensis Z   3 3
No Yes Planctomyces brasiliensis DSM 5305   1 1
No Yes Planctomyces limnophilus DSM 3776   1 1
No Yes Rhodopirellula baltica SH 1   2 2
No Yes Pirellula staleyi DSM 6068   1 1
No Yes Coraliomargarita akajimensis DSM 45221   2 1
No Yes Turneriella parva DSM 21527   1 1
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   1 1
No Yes Leptospira interrogans serovar Lai str. IPAV   2 2
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   1 1
No Yes Brachyspira murdochii DSM 12563   1 1
No Yes Brachyspira intermedia PWS/A   2 2
No Yes Brachyspira hyodysenteriae WA1   1 1
No Yes Spirochaeta smaragdinae DSM 11293   2 2
No Yes Sphaerochaeta pleomorpha str. Grapes   2 2
No Yes Sphaerochaeta globus str. Buddy   1 1
No Yes Sphaerochaeta coccoides DSM 17374   1 1
No Yes Spirochaeta caldaria DSM 7334   1 1
No Yes Treponema azotonutricium ZAS-9   1 1
No Yes Treponema primitia ZAS-2   1 1
No Yes Treponema brennaborense DSM 12168   1 1
No Yes Treponema paraluiscuniculi Cuniculi A   1 1
No Yes Treponema succinifaciens DSM 2489   2 2
No Yes Treponema pallidum subsp. pallidum SS14   2 2
No Yes Treponema denticola ATCC 35405   1 1
No Yes Spirochaeta africana DSM 8902   2 2
No Yes Spirochaeta thermophila DSM 6192   1 1
No Yes Thermodesulfatator indicus DSM 15286   1 1
No Yes Desulfurispirillum indicum S5   1 1
No Yes Sulfurihydrogenibium sp. YO3AOP1   1 1
No Yes Persephonella marina EX-H1   1 1
No Yes Hydrogenobaculum sp. SN   1 1
No Yes Hydrogenobaculum sp. HO   1 1
No Yes Hydrogenobaculum sp. Y04AAS1   1 1
No Yes Thermocrinis albus DSM 14484   1 1
No Yes Hydrogenobacter thermophilus TK-6   1 1
No Yes Candidatus Chloracidobacterium thermophilum B   2 1
No Yes Granulicella tundricola MP5ACTX9   4 3
No Yes Granulicella mallensis MP5ACTX8   2 2
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Candidatus Nitrospira defluvii   4 2
No Yes Leptospirillum ferrooxidans C2-3   4 2
No Yes Sebaldella termitidis ATCC 33386   3 3
No Yes Ilyobacter polytropus DSM 2926   1 1
No Yes Candidatus Methylomirabilis oxyfera   2 2
No Yes Bacteriovorax marinus SJ   2 2
No Yes Bdellovibrio bacteriovorus HD100   2 2
No Yes Sulfurospirillum barnesii SES-3   1 1
No Yes Arcobacter sp. L   1 1
No Yes Arcobacter nitrofigilis DSM 7299   2 2
No Yes uncultured Sulfuricurvum sp. RIFRC-1   2 2
No Yes Sulfuricurvum kujiense DSM 16994   3 3
No Yes Sulfurimonas autotrophica DSM 16294   1 1
No Yes Helicobacter cinaedi PAGU611   2 2
No Yes Sulfurovum sp. NBC37-1   1 1
No Yes Desulfarculus baarsii DSM 2075   1 1
No Yes Syntrophus aciditrophicus SB   3 2
No Yes Desulfomonile tiedjei DSM 6799   10 6
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfurivibrio alkaliphilus AHT2   4 1
No Yes Desulfotalea psychrophila LSv54   4 3
No Yes Desulfobulbus propionicus DSM 2032   4 3
No Yes Desulfatibacillum alkenivorans AK-01   4 4
No Yes Desulfobacterium autotrophicum HRM2   1 1
No Yes Desulfovibrio piezophilus   1 1
No Yes Desulfovibrio aespoeensis Aspo-2   1 1
No Yes Desulfovibrio magneticus RS-1   2 1
No Yes Desulfovibrio salexigens DSM 2638   7 4
No Yes Desulfovibrio africanus str. Walvis Bay   5 2
No Yes Geobacter sp. M21   2 2
No Yes Geobacter uraniireducens Rf4   11 3
No Yes Geobacter bemidjiensis Bem   1 1
No Yes Geobacter sulfurreducens KN400   2 2
No Yes Geobacter metallireducens GS-15   3 2
No Yes Pelobacter propionicus DSM 2379   2 1
No Yes Pelobacter carbinolicus DSM 2380   2 1
No Yes Haliangium ochraceum DSM 14365   4 3
No Yes Sorangium cellulosum 'So ce 56'   50 25
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Stigmatella aurantiaca DW4/3-1   2 2
No Yes Corallococcus coralloides DSM 2259   4 4
No Yes Myxococcus xanthus DK 1622   6 5
No Yes Myxococcus fulvus HW-1   5 4
No Yes Dechloromonas aromatica RCB   1 1
No Yes Thauera sp. MZ1T   2 1
No Yes Azoarcus sp. BH72   1 1
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   1 1
No Yes Methylibium petroleiphilum PM1   1 1
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Burkholderia xenovorans LB400   1 1
No Yes Ralstonia pickettii 12D   1 1
No Yes Burkholderia sp. RPE64   4 2
No Yes Burkholderia sp. CCGE1002   1 1
No Yes Burkholderia thailandensis E264   8 4
No Yes Burkholderia pseudomallei 1106a   13 6
No Yes Burkholderia mallei SAVP1   13 6
No Yes Burkholderia cenocepacia HI2424   1 1
No Yes Burkholderia vietnamiensis G4   1 1
No Yes Burkholderia glumae BGR1   5 2
No Yes Delftia sp. Cs1-4   2 1
No Yes Delftia acidovorans SPH-1   2 1
No Yes Polaromonas naphthalenivorans CJ2   5 3
No Yes Variovorax paradoxus S110   19 9
No Yes Acidovorax avenae subsp. avenae ATCC 19860   1 1
No Yes Janthinobacterium sp. Marseille   1 1
No Yes Pusillimonas sp. T7-7   9 4
No Yes Advenella kashmirensis WT001   14 6
No Yes Taylorella asinigenitalis MCE3   8 4
No Yes Taylorella equigenitalis MCE9   8 4
No Yes Bordetella petrii DSM 12804   14 6
No Yes Bordetella parapertussis 12822   2 1
No Yes Bordetella bronchiseptica RB50   4 2
No Yes Achromobacter xylosoxidans A8   5 3
No Yes Achromobacter xylosoxidans   1 1
No Yes Thiobacillus denitrificans ATCC 25259   1 1
No Yes Gallionella capsiferriformans ES-2   2 1
No Yes Methylotenera versatilis 301   1 1
No Yes Magnetococcus marinus MC-1   21 2
No Yes Parvularcula bermudensis HTCC2503   4 4
No Yes Asticcacaulis excentricus CB 48   9 4
No Yes Brevundimonas subvibrioides ATCC 15264   10 5
No Yes Caulobacter sp. K31   12 6
No Yes Caulobacter crescentus NA1000   13 6
No Yes Caulobacter segnis ATCC 21756   10 4
No Yes Phenylobacterium zucineum HLK1   9 4
No Yes Erythrobacter litoralis HTCC2594   1 1
No Yes Novosphingobium sp. PP1Y   1 1
No Yes Novosphingobium aromaticivorans DSM 12444   2 2
No Yes Sphingobium sp. SYK-6   1 1
No Yes Sphingobium japonicum UT26S   1 1
No Yes Sphingomonas sp. MM-1   1 1
No Yes Sphingomonas wittichii RW1   1 1
No Yes Maricaulis maris MCS10   10 5
No Yes Hirschia baltica ATCC 49814   1 1
No Yes Hyphomonas neptunium ATCC 15444   2 2
No Yes Dinoroseobacter shibae DFL 12   4 4
No Yes Phaeobacter gallaeciensis 2.10   1 1
No Yes Pseudovibrio sp. FO-BEG1   6 5
No Yes Jannaschia sp. CCS1   2 2
No Yes Roseobacter litoralis Och 149   1 1
No Yes Roseobacter denitrificans OCh 114   1 1
No Yes Rhodobacter capsulatus SB 1003   1 1
No Yes Paracoccus denitrificans PD1222   1 1
No Yes Rhodospirillum photometricum DSM 122   3 1
No Yes Tistrella mobilis KA081020-065   1 1
No Yes Magnetospirillum magneticum AMB-1   4 4
No Yes Rhodospirillum centenum SW   18 7
No Yes Rhodospirillum rubrum F11   1 1
No Yes Azospirillum lipoferum 4B   23 9
No Yes Azospirillum sp. B510   22 9
No Yes Azospirillum brasilense Sp245   28 12
No Yes Granulibacter bethesdensis CGDNIH1   1 1
No Yes Polymorphum gilvum SL003B-26A1   1 1
No Yes Micavibrio aeruginosavorus ARL-13   5 3
No Yes alpha proteobacterium HIMB5   1 1
No Yes Candidatus Midichloria mitochondrii IricVA   2 1
No Yes Neorickettsia sennetsu str. Miyayama   3 1
No Yes Neorickettsia risticii str. Illinois   3 1
No Yes Wolbachia endosymbiont of Culex quinquefasciatus Pel   4 1
No Yes Wolbachia sp. wRi   3 1
No Yes Ehrlichia chaffeensis str. Arkansas   4 1
No Yes Ehrlichia canis str. Jake   4 1
No Yes Ehrlichia ruminantium str. Gardel   5 2
No Yes Anaplasma phagocytophilum HZ   3 1
No Yes Anaplasma marginale str. Florida   3 1
No Yes Anaplasma centrale str. Israel   4 1
No Yes Orientia tsutsugamushi str. Boryong   6 2
No Yes Rickettsia bellii OSU 85-389   4 1
No Yes Rickettsia canadensis str. McKiel   8 3
No Yes Rickettsia typhi str. Wilmington   5 2
No Yes Rickettsia prowazekii str. BuV67-CWPP   5 2
No Yes Rickettsia philipii str. 364D   8 2
No Yes Rickettsia heilongjiangensis 054   8 3
No Yes Rickettsia peacockii str. Rustic   9 3
No Yes Rickettsia felis URRWXCal2   9 3
No Yes Rickettsia slovaca 13-B   9 3
No Yes Rickettsia parkeri str. Portsmouth   8 3
No Yes Rickettsia massiliae MTU5   8 3
No Yes Rickettsia japonica YH   8 4
No Yes Rickettsia africae ESF-5   8 3
No Yes Rickettsia rhipicephali str. 3-7-female6-CWPP   9 3
No Yes Rickettsia montanensis str. OSU 85-930   9 3
No Yes Candidatus Rickettsia amblyommii str. GAT-30V   8 3
No Yes Rickettsia australis str. Cutlack   8 3
No Yes Rickettsia akari str. Hartford   9 3
No Yes Rickettsia rickettsii str. 'Sheila Smith'   7 2
No Yes Rickettsia conorii str. Malish 7   8 3
No Yes Starkeya novella DSM 506   2 1
No Yes Azorhizobium caulinodans ORS 571   2 2
No Yes Methylobacterium chloromethanicum CM4   2 1
No Yes Methylobacterium extorquens AM1   5 5
No Yes Methylobacterium sp. 4-46   2 2
No Yes Methylobacterium populi BJ001   1 1
No Yes Methylobacterium nodulans ORS 2060   2 2
No Yes Methylobacterium radiotolerans JCM 2831   3 2
No Yes Parvibaculum lavamentivorans DS-1   3 2
No Yes Sinorhizobium fredii NGR234   1 1
No Yes Sinorhizobium medicae WSM419   1 1
No Yes Sinorhizobium meliloti AK83   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   2 2
No Yes Rhizobium etli CIAT 652   1 1
No Yes Rhizobium leguminosarum bv. viciae 3841   2 2
No Yes Agrobacterium tumefaciens str. C58   2 2
No Yes Agrobacterium radiobacter K84   2 2
No Yes Agrobacterium sp. H13-3   2 2
No Yes Agrobacterium vitis S4   1 1
No Yes Mesorhizobium sp. BNC1   2 1
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Methylocella silvestris BL2   4 3
No Yes Beijerinckia indica subsp. indica ATCC 9039   1 1
No Yes Pelagibacterium halotolerans B2   2 1
No Yes Rhodomicrobium vannielii ATCC 17100   1 1
No Yes Hyphomicrobium sp. MC1   7 5
No Yes Hyphomicrobium denitrificans ATCC 51888   3 3
No Yes Bradyrhizobium japonicum USDA 110   3 2
No Yes Methylocystis sp. SC2   4 3
No Yes Saccharophagus degradans 2-40   3 2
No Yes Cellvibrio japonicus Ueda107   3 2
No Yes Aggregatibacter aphrophilus NJ8700   1 1
No Yes Pasteurella multocida subsp. multocida str. 3480   1 1
No Yes Actinobacillus succinogenes 130Z   1 1
No Yes Aeromonas veronii B565   2 2
No Yes Aeromonas salmonicida subsp. salmonicida A449   3 3
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   2 2
No Yes Aliivibrio salmonicida LFI1238   2 1
No Yes Vibrio fischeri MJ11   2 1
No Yes Vibrio sp. Ex25   2 1
No Yes Vibrio harveyi ATCC BAA-1116   2 1
No Yes Vibrio parahaemolyticus RIMD 2210633   3 2
No Yes Vibrio splendidus LGP32   2 2
No Yes Vibrio anguillarum 775   1 1
No Yes Vibrio furnissii NCTC 11218   1 1
No Yes Vibrio vulnificus MO6-24/O   5 3
No Yes Photobacterium profundum SS9   4 2
No Yes Psychromonas ingrahamii 37   9 4
No Yes Psychromonas sp. CNPT3   2 2
No Yes Shewanella piezotolerans WP3   3 3
No Yes Shewanella loihica PV-4   3 2
No Yes Shewanella halifaxensis HAW-EB4   6 5
No Yes Shewanella sediminis HAW-EB3   5 3
No Yes Shewanella denitrificans OS217   1 1
No Yes Shewanella pealeana ATCC 700345   5 4
No Yes Shewanella oneidensis MR-1   1 1
No Yes Shewanella baltica OS185   1 1
No Yes Shewanella woodyi ATCC 51908   2 2
No Yes Shewanella sp. MR-4   1 1
No Yes Shewanella amazonensis SB2B   2 2
No Yes Shewanella violacea DSS12   5 4
No Yes Shewanella frigidimarina NCIMB 400   3 3
No Yes Shewanella putrefaciens CN-32   2 2
No Yes Colwellia psychrerythraea 34H   1 1
No Yes Pseudoalteromonas sp. SM9913   1 1
No Yes Pseudoalteromonas atlantica T6c   1 1
No Yes Pseudoalteromonas haloplanktis TAC125   1 1
No Yes Glaciecola sp. 4H-3-7+YE-5   2 2
No Yes Marinobacter adhaerens HP15   2 2
No Yes Marinobacter sp. BSs20148   1 1
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   3 3
No Yes Marinobacter aquaeolei VT8   1 1
No Yes Alteromonas sp. SN2   1 1
No Yes Kangiella koreensis DSM 16069   2 1
No Yes Hahella chejuensis KCTC 2396   2 2
No Yes Marinomonas sp. MWYL1   4 3
No Yes Marinomonas mediterranea MMB-1   1 1
No Yes Methylomicrobium alcaliphilum   2 1
No Yes Methylomonas methanica MC09   2 1
No Yes Frateuria aurantia DSM 6220   4 2
No Yes Stenotrophomonas maltophilia K279a   1 1
No Yes Xanthomonas albilineans GPE PC73   1 1
No Yes Thioalkalivibrio sp. K90mix   1 1
No Yes Halorhodospira halophila SL1   1 1
No Yes Allochromatium vinosum DSM 180   2 1
No Yes Nitrosococcus watsonii C-113   5 5
No Yes Nitrosococcus halophilus Nc4   3 3
No Yes Nitrosococcus oceani ATCC 19707   4 4
No Yes Coxiella burnetii Dugway 5J108-111   3 1
No Yes Legionella longbeachae NSW150   7 2
No Yes Legionella pneumophila str. Corby   2 1
No Yes gamma proteobacterium HdN1   5 2
No Yes Photorhabdus asymbiotica   7 3
No Yes Xenorhabdus bovienii SS-2004   6 4
No Yes Xenorhabdus nematophila ATCC 19061   4 2
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Edwardsiella ictaluri 93-146   2 1
No Yes Rahnella sp. Y9602   2 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   3 2
No Yes Yersinia pseudotuberculosis IP 31758   7 4
No Yes Yersinia pestis Pestoides F   5 2
No Yes Serratia sp. AS12   1 1
No Yes Serratia sp. ATCC 39006   4 2
No Yes Serratia plymuthica AS9   1 1
No Yes Serratia proteamaculans 568   5 3
No Yes Dickeya zeae Ech1591   1 1
No Yes Pectobacterium wasabiae WPP163   5 3
No Yes Pectobacterium sp. SCC3193   4 3
No Yes Sodalis glossinidius str. 'morsitans'   3 3
No Yes Pantoea sp. At-9b   1 1
No Yes Pantoea vagans C9-1   1 1
No Yes Pantoea ananatis LMG 20103   3 3
No Yes Erwinia tasmaniensis Et1/99   1 1
No Yes Erwinia sp. Ejp617   2 2
No Yes Erwinia billingiae Eb661   1 1
No Yes Erwinia pyrifoliae Ep1/96   2 2
No Yes Erwinia amylovora ATCC 49946   2 2
No Yes Cronobacter sakazakii ES15   4 2
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   2 2
No Yes Shigella sonnei Ss046   3 3
No Yes Shigella flexneri 5 str. 8401   3 3
No Yes Shigella dysenteriae Sd197   1 1
No Yes Shigella boydii CDC 3083-94   1 1
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   2 2
No Yes Klebsiella oxytoca E718   2 1
No Yes Enterobacter aerogenes KCTC 2190   4 2
No Yes Escherichia fergusonii ATCC 35469   2 2
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   3 3
No Yes Enterobacter sp. R4-368   4 2
No Yes Enterobacter asburiae LF7a   1 1
No Yes Citrobacter rodentium ICC168   1 1
No Yes Azotobacter vinelandii DJ   5 2
No Yes Pseudomonas sp. TKP   2 2
No Yes Pseudomonas sp. UW4   1 1
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   2 2
No Yes Pseudomonas entomophila L48   1 1
No Yes Pseudomonas syringae pv. tomato str. DC3000   2 2
No Yes Pseudomonas stutzeri A1501   1 1
No Yes Pseudomonas fulva 12-X   1 1
No Yes Pseudomonas putida F1   1 1
No Yes Pseudomonas protegens Pf-5   3 3
No Yes Pseudomonas fluorescens SBW25   2 2
No Yes Pseudomonas mendocina ymp   2 2
No Yes Pseudomonas aeruginosa UCBPP-PA14   2 2
No Yes Pseudomonas sp. VLB120   1 1
No Yes Psychrobacter sp. G   1 1
No Yes Psychrobacter sp. PRwf-1   1 1
No Yes Psychrobacter arcticus 273-4   2 2
No Yes Psychrobacter cryohalolentis K5   1 1
No Yes Methylophaga sp. JAM1   3 3
No Yes Francisella noatunensis subsp. orientalis str. Toba 04   1 1
No Yes Candidatus Nitrosopumilus sp. AR2   1 1
No Yes Methanocella arvoryzae MRE50   1 1
No Yes Methanocella conradii HZ254   2 1
No Yes Methanocella paludicola SANAE   2 1
No Yes Methanosaeta harundinacea 6Ac   6 4
No Yes Methanosaeta thermophila PT   6 2
No Yes Methanosaeta concilii GP6   6 2
No Yes Methanosalsum zhilinae DSM 4017   1 1
No Yes Methanococcoides burtonii DSM 6242   1 1
No Yes Methanosarcina acetivorans C2A   8 5
No Yes Methanosarcina mazei Go1   2 2
No Yes Methanosarcina barkeri str. Fusaro   15 10
No Yes Methanosphaerula palustris E1-9c   1 1
No Yes Methanospirillum hungatei JF-1   1 1
No Yes Methanocorpusculum labreanum Z   2 2
No Yes Methanoplanus petrolearius DSM 11571   2 2
No Yes Thermococcus sp. 4557   1 1
No Yes Thermococcus gammatolerans EJ3   1 1
No Yes Thermoplasmatales archaeon BRNA1   3 1
No Yes Halopiger xanaduensis SH-6   1 1
No Yes Haloterrigena turkmenica DSM 5511   1 1
No Yes Haloquadratum walsbyi DSM 16790   2 2
No Yes Halogeometricum borinquense DSM 11551   1 1
No Yes Haloarcula hispanica ATCC 33960   1 1
No Yes Haloarcula marismortui ATCC 43049   2 1
No Yes Halalkalicoccus jeotgali B3   4 4
No Yes Halobacterium salinarum R1   1 1
No Yes Halobacterium sp. NRC-1   1 1
No Yes Methanocaldococcus sp. FS406-22   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 9 8
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 2 2
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Coccidioides posadasii str. Silveira   3 3
No Yes Coccidioides immitis RMSCC 3703   1 1
No Yes Coccidioides immitis RMSCC 2394   1 1
No Yes Ajellomyces dermatitidis ER-3   1 1
No Yes Histoplasma capsulatum H143   2 2
No Yes Histoplasma capsulatum H88   2 2
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Aspergillus fumigatus A1163   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 4 4
No Yes Hordeum vulgare 22 Domesticated barley 12 12
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 6 6
No Yes Trypanosoma brucei Lister 427 v4.1   3 3
No Yes Neospora caninum Nc-Liverpool 6.2   3 1
No Yes Plasmodium falciparum HB3   13 13
No Yes Plasmodium falciparum Dd2   14 14
No Yes Chroococcidiopsis thermalis PCC 7203   30 27
No Yes Chamaesiphon minutus PCC 6605   44 38
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   20 16
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   20 16
No Yes Synechocystis sp. PCC 6803 substr. GT-I   21 16
No Yes Synechocystis sp. PCC 6803   22 17
No Yes Cyanobium gracile PCC 6307   8 7
No Yes Dactylococcopsis salina PCC 8305   10 8
No Yes Synechococcus sp. JA-2-3B'a(2-13)   20 15
No Yes Synechococcus sp. JA-3-3Ab   17 15
No Yes Synechococcus sp. CC9902   5 5
No Yes Synechococcus sp. RCC307   6 6
No Yes Synechococcus sp. CC9605   5 5
No Yes Synechococcus sp. WH 8102   6 6
No Yes Synechococcus sp. WH 7803   6 6
No Yes Synechococcus sp. PCC 7002   24 16
No Yes Synechococcus elongatus PCC 6301   10 10
No Yes Prochlorococcus marinus str. NATL1A   4 4
No Yes Prochlorococcus marinus str. MIT 9301   4 4
No Yes Prochlorococcus marinus str. AS9601   4 4
No Yes Prochlorococcus marinus subsp. marinus str. CCMP1375   4 4
No Yes Prochlorococcus marinus subsp. pastoris str. CCMP1986   4 4
No Yes Prochlorococcus marinus str. MIT 9215   4 4
No Yes Prochlorococcus marinus str. MIT 9211   4 4
No Yes Prochlorococcus marinus str. MIT 9313   7 7
No Yes Prochlorococcus marinus str. MIT 9312   4 4
No Yes Prochlorococcus marinus str. MIT 9303   7 7
No Yes Prochlorococcus marinus str. NATL2A   4 4
No Yes Crinalium epipsammum PCC 9333   43 31
No Yes Oscillatoria nigro-viridis PCC 7112   84 55
No Yes Oscillatoria acuminata PCC 6304   88 57
No Yes Arthrospira platensis NIES-39   59 41
No Yes Cyanothece sp. PCC 7822   46 39
No Yes Cyanothece sp. PCC 7425   42 34
No Yes Cyanothece sp. PCC 7424   44 35
No Yes Cyanothece sp. ATCC 51142   46 38
No Yes Cyanothece sp. PCC 8801   40 31
No Yes Cyanobacterium aponinum PCC 10605   33 25
No Yes Cyanobacterium stanieri PCC 7202   26 20
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   37 25
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   40 33
No Yes Stanieria cyanosphaera PCC 7437   39 29
No Yes Calothrix parietina Calothrix sp. PCC 6303   62 48
No Yes Cylindrospermum stagnale PCC 7417   51 42
No Yes Anabaena cylindrica PCC 7122   51 40
No Yes Mycoplasma leachii PG50   3 3
No Yes Mycoplasma mycoides subsp. mycoides SC str. Gladysdale   1 1
No Yes Mycoplasma mycoides subsp. mycoides SC str. PG1   1 1
No Yes Mycoplasma bovis Hubei-1   1 1
No Yes Gordonibacter pamelaeae 7-10-1-b   1 1
No Yes Adlercreutzia equolifaciens DSM 19450   1 1
No Yes Frankia sp. EuI1c   5 5
No Yes Frankia sp. CcI3   1 1
No Yes Nocardiopsis alba ATCC BAA-2165   4 4
No Yes Streptomyces albus J1074   2 2
No Yes Streptomyces rapamycinicus NRRL 5491   4 4
No Yes Streptomyces davawensis JCM 4913   4 4
No Yes Streptomyces fulvissimus DSM 40593   3 3
No Yes Streptomyces venezuelae ATCC 10712   4 3
No Yes Streptomyces collinus Tu 365   4 4
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   3 3
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   4 4
No Yes Saccharothrix espanaensis DSM 44229   12 12
No Yes Amycolatopsis mediterranei RB   6 6
No Yes Amycolatopsis mediterranei S699   6 6
No Yes Amycolatopsis mediterranei S699   6 6
No Yes Amycolatopsis orientalis HCCB10007   5 5
No Yes Propionibacterium acidipropionici ATCC 4875   1 1
No Yes Actinoplanes friuliensis DSM 7358   7 7
No Yes Rhodococcus pyridinivorans SB3094   1 1
No Yes Rhodococcus erythropolis CCM2595   5 4
No Yes Nocardia brasiliensis ATCC 700358   3 3
No Yes Mycobacterium sp. MOTT36Y   1 1
No Yes Mycobacterium abscessus subsp. bolletii 50594   1 1
No Yes Mycobacterium liflandii 128FXT   1 1
No Yes Mycobacterium sp. KMS   1 1
No Yes Mycobacterium sp. MCS   1 1
No Yes Mycobacterium yongonense 05-1390   1 1
No Yes Mycobacterium intracellulare MOTT-64   1 1
No Yes Mycobacterium indicus pranii MTCC 9506   1 1
No Yes Mycobacterium intracellulare MOTT-02   1 1
No Yes Mycobacterium avium subsp. paratuberculosis MAP4   1 1
No Yes Mycobacterium avium subsp. paratuberculosis K-10   1 1
No Yes Mycobacterium canettii CIPT 140060008   1 1
No Yes Mycobacterium canettii CIPT 140070008   1 1
No Yes Mycobacterium canettii CIPT 140070010   1 1
No Yes Mycobacterium tuberculosis EAI5/NITR206   2 2
No Yes Mycobacterium tuberculosis EAI5   1 1
No Yes Mycobacterium tuberculosis CAS/NITR204   2 2
No Yes Mycobacterium tuberculosis str. Beijing/NITR203   1 1
No Yes Mycobacterium tuberculosis UT205   1 1
No Yes Mycobacterium tuberculosis RGTB423   1 1
No Yes Mycobacterium tuberculosis RGTB327   1 1
No Yes Mycobacterium tuberculosis CTRI-2   1 1
No Yes Mycobacterium tuberculosis str. Erdman = ATCC 35801   1 1
No Yes Mycobacterium tuberculosis KZN 605   1 1
No Yes Mycobacterium tuberculosis KZN 4207   1 1
No Yes Mycobacterium tuberculosis CCDC5180   2 2
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis H37Ra   2 2
No Yes Mycobacterium tuberculosis str. Haarlem   1 1
No Yes Mycobacterium tuberculosis F11   1 1
No Yes Mycobacterium tuberculosis H37Rv   2 2
No Yes Mycobacterium tuberculosis CDC1551   1 1
No Yes Mycobacterium bovis AF2122/97   1 1
No Yes Mycobacterium bovis BCG str. Korea 1168P   1 1
No Yes Mycobacterium bovis BCG str. Mexico   1 1
No Yes Mycobacterium bovis BCG str. Tokyo 172   1 1
No Yes Mycobacterium gilvum Spyr1   1 1
No Yes Mycobacterium smegmatis str. MC2 155   2 2
No Yes Mycobacterium kansasii ATCC 12478   2 2
No Yes Corynebacterium callunae DSM 20147   2 2
No Yes Corynebacterium glutamicum MB001   1 1
No Yes Corynebacterium glutamicum SCgG2   3 2
No Yes Corynebacterium glutamicum SCgG1   3 2
No Yes Corynebacterium glutamicum ATCC 13032   2 2
No Yes Corynebacterium glutamicum ATCC 13032   2 2
No Yes Corynebacterium glutamicum ATCC 13032   2 2
No Yes Corynebacterium diphtheriae C7 (beta)   1 1
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   1 1
No Yes Bifidobacterium longum subsp. infantis 157F   1 1
No Yes Bifidobacterium animalis subsp. animalis ATCC 25527   1 1
No Yes Bifidobacterium animalis subsp. lactis Bl12   1 1
No Yes Bifidobacterium animalis subsp. lactis B420   1 1
No Yes Bifidobacterium animalis subsp. lactis ATCC 27673   1 1
No Yes Bifidobacterium animalis subsp. lactis BLC1   1 1
No Yes Bifidobacterium animalis subsp. lactis CNCM I-2494   1 1
No Yes Bifidobacterium animalis subsp. lactis Bi-07   1 1
No Yes Bifidobacterium animalis subsp. lactis V9   1 1
No Yes Bifidobacterium animalis subsp. lactis DSM 10140   1 1
No Yes Bifidobacterium animalis subsp. lactis BB-12   1 1
No Yes Bifidobacterium animalis subsp. lactis AD011   1 1
No Yes Actinomyces graevenitzii C83   1 1
No Yes Actinomyces odontolyticus ATCC 17982   1 1
No Yes Actinomyces viscosus C505   1 1
No Yes Erysipelothrix rhusiopathiae SY1027   1 1
No Yes Eubacterium siraeum V10Sc8a   1 1
No Yes Faecalibacterium prausnitzii L2-6   1 1
No Yes Clostridium acidurici 9a   1 1
No Yes Desulfosporosinus meridiei DSM 13257   2 2
No Yes Desulfitobacterium hafniense DCB-2   1 1
No Yes Desulfotomaculum gibsoniae DSM 7213   2 2
No Yes Clostridium difficile BI1   3 3
No Yes Clostridium difficile R20291   3 3
No Yes Clostridium difficile CD196   3 3
No Yes Roseburia intestinalis XB6B4   1 1
No Yes Clostridium saccharobutylicum DSM 13864   4 4
No Yes Clostridium autoethanogenum DSM 10061   2 2
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   5 5
No Yes Clostridium tetani genome 12124569   1 1
No Yes Clostridium perfringens SM101   1 1
No Yes Clostridium perfringens str. 13   2 2
No Yes Clostridium pasteurianum BC1   1 1
No Yes Clostridium botulinum H04402 065   2 2
No Yes Clostridium botulinum F str. 230613   3 3
No Yes Clostridium botulinum F str. Langeland   3 3
No Yes Clostridium botulinum E3 str. Alaska E43   3 3
No Yes Clostridium botulinum B1 str. Okra   3 3
No Yes Clostridium botulinum Ba4 str. 657   3 3
No Yes Clostridium botulinum A2 str. Kyoto   3 3
No Yes Clostridium botulinum A3 str. Loch Maree   3 3
No Yes Clostridium botulinum A str. Hall   3 3
No Yes Clostridium botulinum A str. ATCC 19397   3 3
No Yes Clostridium acetobutylicum DSM 1731   5 5
No Yes Clostridium acetobutylicum EA 2018   5 5
No Yes Carnobacterium maltaromaticum LMA28   2 2
No Yes Enterococcus mundtii QU 25   1 1
No Yes Enterococcus casseliflavus EC20   1 1
No Yes Enterococcus faecium Aus0085   2 2
No Yes Enterococcus faecium NRRL B-2354   2 2
No Yes Enterococcus faecium DO   2 2
No Yes Enterococcus faecalis str. Symbioflor 1   1 1
No Yes Enterococcus faecalis D32   1 1
No Yes Enterococcus faecalis OG1RF   1 1
No Yes Enterococcus faecalis V583   1 1
No Yes Leuconostoc gelidum JB7   1 1
No Yes Lactobacillus reuteri I5007   1 1
No Yes Lactobacillus plantarum 16   1 1
No Yes Lactobacillus plantarum ZJ316   1 1
No Yes Lactobacillus plantarum subsp. plantarum ST-III   1 1
No Yes Lactobacillus plantarum subsp. plantarum P-8   1 1
No Yes Lactobacillus plantarum WCFS1   1 1
No Yes Lactobacillus brevis KB290   1 1
No Yes Pediococcus pentosaceus SL4   1 1
No Yes Lactococcus garvieae Lg2   2 2
No Yes Lactococcus lactis subsp. lactis KLDS 4.0325   1 1
No Yes Lactococcus lactis subsp. lactis IO-1   1 1
No Yes Lactococcus lactis subsp. lactis CV56   1 1
No Yes Lactococcus lactis subsp. lactis KF147   1 1
No Yes Lactococcus lactis subsp. lactis Il1403   1 1
No Yes Lactococcus lactis subsp. cremoris KW2   1 1
No Yes Lactococcus lactis subsp. cremoris UC509.9   1 1
No Yes Lactococcus lactis subsp. cremoris A76   1 1
No Yes Lactococcus lactis subsp. cremoris NZ9000   1 1
No Yes Lactococcus lactis subsp. cremoris SK11   1 1
No Yes Streptococcus suis JS14   1 1
No Yes Streptococcus salivarius JIM8777   1 1
No Yes Exiguobacterium antarcticum B7   1 1
No Yes Paenibacillus sp. Y412MC10   3 3
No Yes Paenibacillus mucilaginosus KNP414   9 5
No Yes Paenibacillus mucilaginosus K02   7 5
No Yes Paenibacillus polymyxa CR1   6 6
No Yes Paenibacillus polymyxa SC2   6 6
No Yes Paenibacillus polymyxa E681   4 4
No Yes Listeria monocytogenes EGD sequence   1 1
No Yes Listeria monocytogenes N53-1   1 1
No Yes Listeria monocytogenes La111   1 1
No Yes Listeria monocytogenes serotype 4b str. LL195   1 1
No Yes Listeria monocytogenes 07PF0776   1 1
No Yes Listeria monocytogenes M7   2 2
No Yes Listeria monocytogenes J1-220   1 1
No Yes Listeria monocytogenes J1816   1 1
No Yes Listeria monocytogenes SLCC2376   1 1
No Yes Listeria monocytogenes SLCC5850   1 1
No Yes Listeria monocytogenes ATCC 19117   1 1
No Yes Listeria monocytogenes L312   1 1
No Yes Listeria monocytogenes SLCC2479   2 2
No Yes Listeria monocytogenes SLCC7179   2 2
No Yes Listeria monocytogenes SLCC2540   2 2
No Yes Listeria monocytogenes SLCC2378   1 1
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   1 1
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   2 2
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   1 1
No Yes Listeria monocytogenes 08-5578   2 2
No Yes Listeria monocytogenes 08-5923   2 2
No Yes Listeria monocytogenes L99   2 2
No Yes Listeria monocytogenes HCC23   2 2
No Yes Listeria monocytogenes 10403S   1 1
No Yes Listeria monocytogenes J0161   3 3
No Yes Listeria monocytogenes Finland 1998   1 1
No Yes Listeria monocytogenes FSL R2-561   4 4
No Yes Listeria monocytogenes serotype 4b str. F2365   1 1
No Yes Listeria monocytogenes EGD-e   2 2
No Yes Amphibacillus xylanus NBRC 15112   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   2 2
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   3 3
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   2 2
No Yes Bacillus amyloliquefaciens LFB112   1 1
No Yes Bacillus amyloliquefaciens CC178   2 2
No Yes Bacillus amyloliquefaciens Y2   1 1
No Yes Bacillus amyloliquefaciens IT-45   1 1
No Yes Bacillus amyloliquefaciens XH7   1 1
No Yes Bacillus amyloliquefaciens LL3   1 1
No Yes Bacillus amyloliquefaciens TA208   1 1
No Yes Bacillus amyloliquefaciens DSM 7   1 1
No Yes Bacillus subtilis PY79   2 2
No Yes Bacillus subtilis XF-1   2 2
No Yes Bacillus subtilis QB928   2 2
No Yes Bacillus subtilis BSn5   2 2
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   2 2
No Yes Bacillus subtilis subsp. subtilis str. BSP1   2 2
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   2 2
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   2 2
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   2 2
No Yes Bacillus subtilis subsp. spizizenii str. W23   1 1
No Yes Bacillus subtilis subsp. natto BEST195   2 2
No Yes Bacillus infantis NRRL B-14911   1 1
No Yes Bacillus toyonensis BCT-7112   3 3
No Yes Bacillus thuringiensis HD-771   4 4
No Yes Bacillus thuringiensis HD-789   6 5
No Yes Bacillus thuringiensis MC28   3 3
No Yes Bacillus thuringiensis serovar chinensis CT-43   3 3
No Yes Bacillus thuringiensis YBT-1518   3 3
No Yes Bacillus thuringiensis Bt407   3 3
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   3 3
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   3 3
No Yes Bacillus thuringiensis BMB171   5 4
No Yes Bacillus thuringiensis serovar finitimus YBT-020   2 2
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   3 3
No Yes Bacillus cereus FRI-35   3 3
No Yes Bacillus cereus biovar anthracis str. CI   4 4
No Yes Bacillus cereus AH820   3 3
No Yes Bacillus cereus AH187   3 3
No Yes Bacillus cereus B4264   5 4
No Yes Bacillus cereus G9842   3 3
No Yes Bacillus cereus Q1   3 3
No Yes Bacillus cereus F837/76   3 3
No Yes Bacillus cereus NC7401   3 3
No Yes Bacillus cereus E33L   3 3
No Yes Bacillus cereus ATCC 14579   4 4
No Yes Bacillus cereus ATCC 10987   3 3
No Yes Bacillus anthracis str. H9401   3 3
No Yes Bacillus anthracis str. CDC 684   3 3
No Yes Bacillus anthracis str. 'Ames Ancestor'   2 2
No Yes Bacillus anthracis str. Sterne   2 2
No Yes Bacillus anthracis str. Ames   2 2
No Yes Bacillus megaterium WSH-002   1 1
No Yes Bacillus megaterium QM B1551   4 3
No Yes Staphylococcus pasteuri SP1   1 1
No Yes Staphylococcus lugdunensis N920143   1 1
No Yes Staphylococcus warneri SG1   1 1
No Yes Staphylococcus epidermidis ATCC 12228   1 1
No Yes Chlorobium phaeobacteroides BS1   6 4
No Yes Echinicola vietnamensis DSM 17526   1 1
No Yes Emticicia oligotrophica DSM 17448   1 1
No Yes Porphyromonas gingivalis TDC60   1 1
No Yes Porphyromonas gingivalis W83   1 1
No Yes Alistipes shahii WAL 8301   1 1
No Yes Bacteroides xylanisolvens XB1A   1 1
No Yes Bacteroides fragilis 638R   1 1
No Yes Bacteroides fragilis NCTC 9343   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   3 1
No Yes Singulisphaera acidiphila DSM 18658   4 4
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   1 1
No Yes Leptospira interrogans serovar Lai str. 56601   2 2
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   2 2
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   1 1
No Yes Treponema pedis str. T A4   1 1
No Yes Treponema pallidum str. Fribourg-Blanc   1 1
No Yes Treponema pallidum subsp. pertenue str. Gauthier   1 1
No Yes Treponema pallidum subsp. pertenue str. CDC2   1 1
No Yes Treponema pallidum subsp. pertenue str. SamoaD   1 1
No Yes Treponema pallidum subsp. pallidum str. Mexico A   1 1
No Yes Treponema pallidum subsp. pallidum str. Chicago   1 1
No Yes Treponema pallidum subsp. pallidum DAL-1   1 1
No Yes Treponema pallidum subsp. pallidum str. Nichols   1 1
No Yes Spirochaeta thermophila DSM 6578   1 1
No Yes Hydrogenobacter thermophilus TK-6   1 1
No Yes Bdellovibrio exovorus JSS   1 1
No Yes Bdellovibrio bacteriovorus str. Tiberius   3 3
No Yes Campylobacter jejuni Waterborne C.jejuni Outbreak   1 1
No Yes Campylobacter jejuni RM1221   1 1
No Yes Desulfocapsa sulfexigens DSM 10523   7 4
No Yes Desulfobacula toluolica Tol2   2 2
No Yes Desulfovibrio hydrothermalis AM13 = DSM 14728   14 8
No Yes Desulfovibrio gigas DSM 1382 = ATCC 19364   5 4
No Yes Desulfovibrio desulfuricans ND132   1 1
No Yes Geobacter sp. M18   1 1
No Yes Geobacter sulfurreducens PCA   2 2
No Yes Sorangium cellulosum So0157-2   55 27
No Yes Anaeromyxobacter dehalogenans 2CP-C   2 1
No Yes Myxococcus stipitatus DSM 14675   8 6
No Yes Pandoraea pnomenusa 3kgm   2 1
No Yes Burkholderia sp. YI23   10 5
No Yes Burkholderia sp. CCGE1001   1 1
No Yes Burkholderia sp. KJ006   1 1
No Yes Burkholderia thailandensis MSMB121   13 6
No Yes Burkholderia pseudomallei MSHR305   13 6
No Yes Burkholderia pseudomallei NCTC 13179   14 7
No Yes Burkholderia pseudomallei BPC006   12 6
No Yes Burkholderia pseudomallei 1026b   13 6
No Yes Burkholderia pseudomallei 668   11 6
No Yes Burkholderia pseudomallei 1710b   13 6
No Yes Burkholderia pseudomallei K96243   13 6
No Yes Burkholderia mallei NCTC 10229   13 6
No Yes Burkholderia mallei NCTC 10247   11 5
No Yes Burkholderia mallei ATCC 23344   8 4
No Yes Burkholderia ambifaria MC40-6   1 1
No Yes Burkholderia cenocepacia AU 1054   1 1
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Variovorax paradoxus B4   12 6
No Yes Variovorax paradoxus EPS   14 8
No Yes Taylorella asinigenitalis 14/45   9 5
No Yes Taylorella equigenitalis 14/56   7 4
No Yes Taylorella equigenitalis ATCC 35865   8 4
No Yes Bordetella parapertussis Bpp5   4 3
No Yes Bordetella bronchiseptica MO149   4 2
No Yes Bordetella bronchiseptica 253   5 3
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   1 1
No Yes Sulfuricella denitrificans skB26   3 2
No Yes Caulobacter crescentus CB15   13 6
No Yes Phaeobacter gallaeciensis DSM 17395   1 1
No Yes Phaeobacter gallaeciensis DSM 26640   2 2
No Yes Octadecabacter antarcticus 307   2 2
No Yes Octadecabacter arcticus 238   2 2
No Yes Magnetospirillum gryphiswaldense MSR-1 v2   4 4
No Yes Rhodospirillum rubrum ATCC 11170   1 1
No Yes Micavibrio aeruginosavorus EPB   6 3
No Yes Candidatus Pelagibacter ubique HTCC1062   1 1
No Yes Wolbachia endosymbiont of Drosophila melanogaster   3 1
No Yes Wolbachia endosymbiont of Onchocerca ochengi str. Adamawa_Cameroon   3 1
No Yes Wolbachia endosymbiont strain TRS of Brugia malayi   3 1
No Yes Wolbachia endosymbiont of Drosophila simulans wHa   3 1
No Yes Wolbachia endosymbiont of Drosophila simulans wNo   4 1
No Yes Ehrlichia muris AS145   4 1
No Yes Ehrlichia ruminantium str. Welgevonden   4 1
No Yes Ehrlichia ruminantium str. Welgevonden   4 1
No Yes Anaplasma phagocytophilum str. Dog2   3 1
No Yes Anaplasma phagocytophilum str. HZ2   3 1
No Yes Anaplasma phagocytophilum str. JM   3 1
No Yes Anaplasma marginale str. Dawn   3 1
No Yes Anaplasma marginale str. Gypsy Plains   3 1
No Yes Anaplasma marginale str. St. Maries   4 1
No Yes Orientia tsutsugamushi str. Ikeda   7 2
No Yes Rickettsia bellii RML369-C   4 1
No Yes Rickettsia canadensis str. CA410   8 3
No Yes Rickettsia typhi str. B9991CWPP   5 2
No Yes Rickettsia typhi str. TH1527   5 2
No Yes Rickettsia prowazekii str. Breinl   5 2
No Yes Rickettsia prowazekii str. NMRC Madrid E   5 2
No Yes Rickettsia prowazekii str. RpGvF24   5 2
No Yes Rickettsia prowazekii str. GvV257   5 2
No Yes Rickettsia prowazekii str. Dachau   4 1
No Yes Rickettsia prowazekii str. Katsinyian   5 2
No Yes Rickettsia prowazekii str. Chernikova   5 2
No Yes Rickettsia prowazekii Rp22   5 2
No Yes Rickettsia prowazekii str. Madrid E   5 2
No Yes Rickettsia slovaca str. D-CWPP   9 3
No Yes Rickettsia massiliae str. AZT80   9 3
No Yes Rickettsia rickettsii str. Arizona   8 3
No Yes Rickettsia rickettsii str. Brazil   8 3
No Yes Rickettsia rickettsii str. Hauke   8 3
No Yes Rickettsia rickettsii str. Colombia   8 3
No Yes Rickettsia rickettsii str. Hlp#2   8 3
No Yes Rickettsia rickettsii str. Hino   8 3
No Yes Rickettsia rickettsii str. Iowa   8 3
No Yes Methylobacterium extorquens DM4   2 2
No Yes Methylobacterium extorquens PA1   1 1
No Yes Sinorhizobium fredii USDA 257   1 1
No Yes Sinorhizobium fredii HH103   1 1
No Yes Sinorhizobium meliloti 2011   1 1
No Yes Sinorhizobium meliloti GR4   1 1
No Yes Sinorhizobium meliloti Rm41   1 1
No Yes Sinorhizobium meliloti SM11   1 1
No Yes Sinorhizobium meliloti BL225C   1 1
No Yes Sinorhizobium meliloti 1021   1 1
No Yes Rhizobium etli CFN 42   1 1
No Yes Rhizobium etli bv. mimosae str. Mim1   1 1
No Yes Rhizobium tropici CIAT 899   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   2 2
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   1 1
No Yes Hyphomicrobium nitrativorans NL23   8 6
No Yes Hyphomicrobium denitrificans 1NES1   5 4
No Yes Rhodopseudomonas palustris DX-1   2 2
No Yes Rhodopseudomonas palustris HaA2   2 2
No Yes Rhodopseudomonas palustris BisB5   2 1
No Yes Rhodopseudomonas palustris BisB18   1 1
No Yes Rhodopseudomonas palustris CGA009   2 1
No Yes Bradyrhizobium sp. S23321   1 1
No Yes Bradyrhizobium sp. BTAi1   2 1
No Yes Bradyrhizobium oligotrophicum S58   3 3
No Yes Bradyrhizobium japonicum USDA 6   5 3
No Yes Pasteurella multocida 36950   1 1
No Yes Pasteurella multocida subsp. multocida str. HN06   1 1
No Yes Pasteurella multocida subsp. multocida str. Pm70   2 1
No Yes Haemophilus influenzae R2846   1 1
No Yes Aeromonas hydrophila ML09-119   2 2
No Yes Vibrio fischeri ES114   3 2
No Yes Vibrio parahaemolyticus BB22OP   2 1
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   3 2
No Yes Vibrio nigripulchritudo VibrioScope   2 2
No Yes Vibrio vulnificus CMCP6   3 2
No Yes Vibrio vulnificus YJ016   3 2
No Yes Shewanella sp. W3-18-1   1 1
No Yes Shewanella sp. ANA-3   1 1
No Yes Shewanella baltica BA175   1 1
No Yes Shewanella baltica OS678   1 1
No Yes Shewanella baltica OS117   1 1
No Yes Shewanella baltica OS223   1 1
No Yes Shewanella baltica OS195   1 1
No Yes Shewanella baltica OS155   1 1
No Yes Shewanella sp. MR-7   1 1
No Yes Shewanella putrefaciens 200   2 2
No Yes Glaciecola psychrophila 170   1 1
No Yes Alteromonas macleodii str. 'English Channel 615'   1 1
No Yes Alteromonas macleodii str. 'English Channel 673'   2 2
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   1 1
No Yes Alteromonas macleodii ATCC 27126   1 1
No Yes Alcanivorax dieselolei B5   1 1
No Yes Thalassolituus oleivorans MIL-1   1 1
No Yes Stenotrophomonas maltophilia D457   1 1
No Yes Stenotrophomonas maltophilia JV3   1 1
No Yes Stenotrophomonas maltophilia R551-3   1 1
No Yes Thioalkalivibrio nitratireducens DSM 14787   3 2
No Yes Thioflavicoccus mobilis 8321   3 2
No Yes Coxiella burnetii CbuK_Q154   3 1
No Yes Coxiella burnetii CbuG_Q212   3 1
No Yes Coxiella burnetii RSA 331   3 1
No Yes Coxiella burnetii RSA 493   3 1
No Yes Legionella pneumophila str. Paris   2 1
No Yes Legionella pneumophila str. Lens   2 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   2 1
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   2 1
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   2 1
No Yes Legionella pneumophila subsp. pneumophila   2 1
No Yes Legionella pneumophila subsp. pneumophila   2 1
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   2 1
No Yes Legionella pneumophila 2300/99 Alcoy   2 1
No Yes Morganella morganii subsp. morganii KT   1 1
No Yes Rahnella aquatilis HX2   3 2
No Yes Yersinia pseudotuberculosis PB1/+   6 3
No Yes Yersinia pseudotuberculosis YPIII   5 2
No Yes Yersinia pseudotuberculosis IP 32953   5 2
No Yes Yersinia pestis biovar Microtus str. 91001   5 2
No Yes Yersinia pestis A1122   2 1
No Yes Yersinia pestis Z176003   5 2
No Yes Yersinia pestis D182038   5 2
No Yes Yersinia pestis D106004   5 2
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   5 2
No Yes Yersinia pestis Nepal516   5 2
No Yes Yersinia pestis Antiqua   5 2
No Yes Yersinia pestis Angola   3 1
No Yes Yersinia pestis CO92   2 1
No Yes Yersinia pestis KIM10+   5 2
No Yes Serratia sp. AS13   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Serratia plymuthica 4Rx13   1 1
No Yes Serratia marcescens FGI94   4 2
No Yes Serratia marcescens WW4   9 5
No Yes Serratia liquefaciens ATCC 27592   2 2
No Yes Dickeya dadantii 3937   1 1
No Yes Pantoea ananatis LMG 5342   5 3
No Yes Pantoea ananatis PA13   8 6
No Yes Pantoea ananatis AJ13355   5 3
No Yes Erwinia pyrifoliae DSM 12163   1 1
No Yes Erwinia amylovora CFBP1430   2 2
No Yes Cronobacter sakazakii CMCC 45402   5 3
No Yes Shigella sonnei 53G   5 5
No Yes Shigella flexneri 2002017   4 3
No Yes Shigella flexneri 2a str. 2457T   3 2
No Yes Shigella flexneri 2a str. 301   4 3
No Yes Shigella boydii Sb227   3 3
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   3 3
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   3 3
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   2 2
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   3 3
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   3 3
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   3 3
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   3 3
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   3 3
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   3 3
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   3 3
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   2 2
No Yes Salmonella enterica serovar Bovismorbificans genomics   3 3
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   3 3
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   3 3
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   3 3
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   3 3
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   2 2
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   2 2
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   2 2
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   3 3
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   3 3
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   3 3
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   3 3
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   2 2
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   2 2
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   2 2
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   3 3
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   1 1
No Yes Enterobacter aerogenes EA1509E   4 2
No Yes Escherichia coli E24377A   5 4
No Yes Escherichia coli LY180   5 4
No Yes Escherichia coli APEC O78   5 4
No Yes Escherichia coli O7:K1 str. CE10   6 6
No Yes Escherichia coli O104:H4 str. 2009EL-2050   6 5
No Yes Escherichia coli O104:H4 str. 2009EL-2071   6 5
No Yes Escherichia coli O104:H4 str. 2011C-3493   6 5
No Yes Escherichia coli P12b   5 4
No Yes Escherichia coli 042   9 9
No Yes Escherichia coli Xuzhou21   14 12
No Yes Escherichia coli UMNK88   5 4
No Yes Escherichia coli KO11FL   3 2
No Yes Escherichia coli KO11FL   3 2
No Yes Escherichia coli IAI39   6 6
No Yes Escherichia coli UMN026   12 11
No Yes Escherichia coli 55989   5 4
No Yes Escherichia coli S88   2 1
No Yes Escherichia coli IAI1   6 5
No Yes Escherichia coli W   5 4
No Yes Escherichia coli W   5 4
No Yes Escherichia coli DH1   5 4
No Yes Escherichia coli DH1   5 4
No Yes Escherichia coli ATCC 8739   3 2
No Yes Escherichia coli BL21(DE3)   2 2
No Yes Escherichia coli BL21(DE3)   2 2
No Yes Escherichia coli SMS-3-5   8 7
No Yes Escherichia coli SE11   6 5
No Yes Escherichia coli O103:H2 str. 12009   3 3
No Yes Escherichia coli HS   3 3
No Yes Escherichia coli ETEC H10407   7 6
No Yes Escherichia coli O55:H7 str. RM12579   10 8
No Yes Escherichia coli O55:H7 str. CB9615   11 9
No Yes Escherichia coli O26:H11 str. 11368   3 3
No Yes Escherichia coli O111:H- str. 11128   3 3
No Yes Escherichia coli O127:H6 str. E2348/69   1 1
No Yes Escherichia coli O157:H7 str. TW14359   12 10
No Yes Escherichia coli O157:H7 str. EC4115   11 9
No Yes Escherichia coli O157:H7 str. Sakai   14 12
No Yes Escherichia coli O157:H7 str. EDL933   14 12
No Yes Escherichia coli str. K-12 substr. MDS42   4 3
No Yes Escherichia coli BW2952   1 1
No Yes Escherichia coli str. K-12 substr. MG1655   3 2
No Yes Escherichia coli str. K-12 substr. W3110   5 4
No Yes Escherichia coli str. K-12 substr. DH10B   5 4
No Yes Escherichia coli B str. REL606   6 5
No Yes Azotobacter vinelandii CA6   5 2
No Yes Azotobacter vinelandii CA   5 2
No Yes Pseudomonas syringae pv. phaseolicola 1448A   1 1
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes Pseudomonas stutzeri CCUG 29243   1 1
No Yes Pseudomonas stutzeri DSM 10701   1 1
No Yes Pseudomonas stutzeri DSM 4166   1 1
No Yes Pseudomonas stutzeri RCH2   1 1
No Yes Pseudomonas stutzeri ATCC 17588 = LMG 11199   1 1
No Yes Pseudomonas monteilii SB3101   1 1
No Yes Pseudomonas monteilii SB3078   1 1
No Yes Pseudomonas putida H8234   1 1
No Yes Pseudomonas putida HB3267   1 1
No Yes Pseudomonas putida NBRC 14164   1 1
No Yes Pseudomonas putida DOT-T1E   1 1
No Yes Pseudomonas putida S16   1 1
No Yes Pseudomonas putida BIRD-1   1 1
No Yes Pseudomonas putida ND6   1 1
No Yes Pseudomonas putida KT2440   1 1
No Yes Pseudomonas putida GB-1   1 1
No Yes Pseudomonas protegens CHA0   3 3
No Yes Pseudomonas poae RE*1-1-14   2 2
No Yes Pseudomonas fluorescens F113   2 2
No Yes Pseudomonas fluorescens A506   2 2
No Yes Pseudomonas fluorescens R124   1 1
No Yes Pseudomonas fluorescens Pf0-1   1 1
No Yes Pseudomonas resinovorans NBRC 106553   2 2
No Yes Pseudomonas mendocina NK-01   2 2
No Yes Pseudomonas aeruginosa SCV20265   2 2
No Yes Pseudomonas aeruginosa MTB-1   2 2
No Yes Pseudomonas aeruginosa LES431   2 2
No Yes Pseudomonas aeruginosa RP73   2 2
No Yes Pseudomonas aeruginosa B136-33   3 3
No Yes Pseudomonas aeruginosa PA1R   1 1
No Yes Pseudomonas aeruginosa PA1   2 2
No Yes Pseudomonas aeruginosa DK2   2 2
No Yes Pseudomonas aeruginosa NCGM2.S1   2 2
No Yes Pseudomonas aeruginosa M18   2 2
No Yes Pseudomonas aeruginosa LESB58   2 2
No Yes Pseudomonas aeruginosa PA7   2 2
No Yes Pseudomonas aeruginosa PAO1   3 3
No Yes Acinetobacter baumannii ATCC 19606   1 1
No Yes Methylophaga sp. JAM7   4 4
No Yes Francisella noatunensis subsp. orientalis LADL--07-285A   2 2
No Yes Candidatus Nitrososphaera gargensis Ga9.2   1 1
No Yes Sulfolobus acidocaldarius SUSAZ   1 1
No Yes Methanolobus psychrophilus R15   2 2
No Yes Methanoregula formicica Methanoregula formicicum SMSP   1 1
No Yes Archaeoglobus sulfaticallidus PM70-1   1 1
No Yes Thermococcus sp. CL1   1 1
No Yes Thermococcus litoralis DSM 5473   1 1
No Yes Halovivax ruber XH-70   2 1
No Yes Natrinema pellirubrum DSM 15624   3 1
No Yes Natronococcus occultus SP4   1 1
No Yes Haloquadratum walsbyi C23   5 3
No Yes Halorhabdus tiamatea SARL4B   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 18 18
No Yes Homo sapiens (NCBI version) Human 7 7
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 6 6
No Yes Heliconius numata (Incomplete)   1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 2 1
No Yes Picea sitchensis (Incomplete) Sitka spruce 3 3
No Yes Lotus japonicus (Early assembly)   3 3
No Yes Malus x domestica (Duplicate) Apple 25 24
No Yes Ricinus communis (Early assembly) Castor bean 4 4
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   9 9
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 4 4
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 4 4
No Yes Phoenix dactylifera (Early draft) Date palm 6 6
No Yes Mycobacterium tuberculosis H37Rv (Duplicate of ex)   2 2
No Yes Wolbachia endosymbiont of Brugia malayi v1.0 (Broad Institute)   3 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   2 1
No Yes Homo sapiens 69_37 Human 7 7
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 6 6
No Yes Gorilla gorilla 69_3.1 Western gorilla 9 9
No Yes Pongo abelii 69_2 Sumatran orangutan 8 8
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 7 7
No Yes Macaca mulatta 69_1 Rhesus monkey 11 9
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 5 5
No Yes Otolemur garnettii 69_3 Small-eared galago 5 5
No Yes Microcebus murinus 69_1 Gray mouse lemur 4 4
No Yes Rattus norvegicus 69_3.4 Norway rat 9 7
No Yes Mus musculus 69_38 House mouse 6 6
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 5 5
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 5 5
No Yes Cavia porcellus 69_3 Domestic guinea pig 5 5
No Yes Oryctolagus cuniculus 69_2 Rabbit 5 5
No Yes Ochotona princeps 69 American pika 5 5
No Yes Tupaia belangeri 69 Northern tree shrew 3 3
No Yes Sus scrofa 69_10.2 Pig 4 4
No Yes Bos taurus 69_3.1 Cattle 6 6
No Yes Vicugna pacos 69_1 Alpaca 4 4
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 6 6
No Yes Mustela putorius furo 69_1.0 Domestic ferret 6 5
No Yes Ailuropoda melanoleuca 69_1 Giant panda 6 6
No Yes Canis familiaris 69_3.1 Dog 5 5
No Yes Felis catus 69 Domestic cat 4 4
No Yes Equus caballus 69_2 Horse 6 6
No Yes Myotis lucifugus 69_2.0 Little brown bat 6 6
No Yes Pteropus vampyrus 69_1 Large flying fox 5 5
No Yes Sorex araneus 69_1 European shrew 4 4
No Yes Erinaceus europaeus 69 Western European hedgehog 3 3
No Yes Procavia capensis 69_1 Cape rock hyrax 3 3
No Yes Loxodonta africana 69_3 African savanna elephant 5 5
No Yes Echinops telfairi 69 Small Madagascar hedgehog 4 4
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 5 5
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 2 2
No Yes Macropus eugenii 69_1.0 Tammar wallaby 4 4
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 5 5
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 9 9
No Yes Ornithorhynchus anatinus 69_5 Platypus 4 4
No Yes Petromyzon marinus 69_7.0 Sea lamprey 7 6
No Yes Meleagris gallopavo 69_2 Turkey 4 4
No Yes Gallus gallus 69_2 Chicken 7 7
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 4 4
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 9 6
No Yes Anolis carolinensis 69_2.0 Green anole 3 3
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 5 5
No Yes Latimeria chalumnae 69_1 Coelacanth 6 5
No Yes Gadus morhua 69_1 Atlantic cod 8 8
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 9 9
No Yes Takifugu rubripes 69_4 Torafugu 7 7
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 6 6
No Yes Oryzias latipes 69_1 Japanese medaka 7 7
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 10 8
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 8 8
No Yes Danio rerio 69_9 Zebrafish 8 8
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 4 4
No Yes Ciona intestinalis 69 Vase tunicate 3 3
No Yes Drosophila melanogaster 69_5 Fruit fly 2 2
No Yes Arabidopsis thaliana 10 Thale cress 4 4
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_Base_of_chrolophyll_max (meta-genome)   2 2
No Yes 3_050719R (meta-genome)   2 2
No Yes 3_Below_base_of_euphotic (meta-genome)   8 8
No Yes 4_050719Q (meta-genome)   104 88
No Yes 4_Deep_abyss (meta-genome)   10 9
No Yes 5_050719P (meta-genome)   61 50
No Yes 5_Below_upper_mesopelagic (meta-genome)   8 8
No Yes 6_Upper_euphotic (meta-genome)   4 4
No Yes 7_Oxygen_minimum_layer (meta-genome)   16 12
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   4 4
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   23 19
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   18 13
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   15 11
No Yes Bath Hot Springs, planktonic community (meta-genome)   2 2
No Yes Combined (meta-genome)   55 45
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   34 30
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   9 9
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   8 8
No Yes Dump bottom (Dump bottom) (meta-genome)   59 59
No Yes Dump top (Dump top) (meta-genome)   72 70
No Yes Endophytic microbiome from Rice (meta-genome)   17 14
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   12 10
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   16 14
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   9 9
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   12 11
No Yes Fungus garden combined (combined) (meta-genome)   25 24
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   30 29
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   31 29
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   4 4
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   50 45
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   35 26
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   16 16
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   9 8
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   7 7
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   11 10
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   5 4
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   6 6
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   21 19
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP10 from Narrow Gauge (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   24 19
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   11 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   4 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   10 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   94 79
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   54 48
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   5 5
No Yes Human Gut Community Subject 8 (meta-genome)   2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   15 12
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   21 21
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   9 9
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   13 10
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   84 75
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   26 24
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   7 7
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   24 21
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   21 17
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   7 7
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   33 33
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   7 7
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   10 10
No Yes Mouse Gut Community lean2 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   158700 133321
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   33 29
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   6 5
No Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome)   2 2
No Yes Olavius algarvensis endosymbiont metagenome Gamma1 (meta-genome)   2 2
No Yes Olavius algarvensis endosymbiont metagenome Gamma3 (meta-genome)   4 3
No Yes Protozoadb 2010_08 (Protozoadb)   92 90
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   84 76
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   37 37
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   39 37
No Yes Single-cell genome from subgingival tooth surface TM7a (meta-genome)   1 1
No Yes Single-cell genome from subgingival tooth surface TM7c (meta-genome)   1 1
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   12 12
No Yes Sludge/US, Jazz Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   8 6
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   49 43
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   110 110
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   153 151
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   82 82
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   170 169
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   82 82
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   83 83
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   10 10
No Yes STRING v9.0.5 (STRING)   2840 2195
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   10 10
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   51 51
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   8 8
No Yes Termite Protist Endosymbiont Community (meta-genome)   5 5
No Yes Uniprot 2018_03 genome   50077 40835
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   29 20
No Yes Global Ocean Sampling Expedition (GOS)   2722 2499
No Yes NCBI plasmid sequences (Plasmids)   293 209
No Yes NCBI viral sequences (Viral)   69 69
No Yes PDB chains (SCOP 1.75) (PDB)   4 4
No Yes Protein Data Bank (all PDB sequenc)   92 84
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   124 116
No Yes TargetDB (Targets)   71 58
No Yes The Salmonella enterica Pan-genome (meta-genome)   78 78
No Yes UniProt viral sequences (Viral)   17 17

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