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BLUF domain family domain assignments
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PDB chains (SCOP 1.75)

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PDB chains (SCOP 1.75) (PDB) has 4 significant domains in 4 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
1x0pA   5.61e-50   0.000011   5-137   1x0p A:102-243  
1yrxA   2.68e-42   0.0000151   8-105   1yrx A:17-130  
2bunA   8.05e-42   0.0000114   16-112   2bun A:5-125  
2bycA   1.12e-39   0.0000139   5-103   2byc A:1-136  

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Select to display   Genome       Domains   Proteins
No Yes ALL   274 274
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Thermosynechococcus sp. NK55   1 1
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Synechococcus sp. PCC 7502   1 1
No Yes Synechococcus sp. PCC 6312   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Rhodobacter sphaeroides ATCC 17029   2 2
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Synechococcus sp. PCC 7002   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Rhodobacter sphaeroides KD131   2 2
No Yes Rhodobacter sphaeroides ATCC 17025   2 2
No Yes Rhodobacter sphaeroides 2.4.1   3 3
No Yes 4_050719Q (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes NCBI 2017_08 genome   60 60
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   13 13
No Yes Uniprot 2018_03 genome   33 33
No Yes NCBI plasmid sequences (Plasmids)   5 5
No Yes PDB chains (SCOP 1.75) (PDB)   4 4
No Yes Protein Data Bank (all PDB sequenc)   24 24
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   96 96

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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