SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


STIV B116-like superfamily domain assignments
in
Physcomitrella patens

Network of domain occurrence in all genomes



No domain assignments for these genomes.


Add assignments from groups of genomes

View all assignments containing a STIV B116-like domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   697 697
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Clostridium lentocellum DSM 5427   1 1
No Yes Alkaliphilus metalliredigens QYMF   1 1
No Yes Clostridium beijerinckii NCIMB 8052   1 1
No Yes Bacillus sp. JS   1 1
No Yes Bacillus atrophaeus 1942   1 1
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Marinitoga piezophila KA3   2 2
No Yes Candidatus Chloracidobacterium thermophilum B   1 1
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   1 1
No Yes Pectobacterium wasabiae WPP163   1 1
No Yes Caldivirga maquilingensis IC-167   1 1
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   2 2
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   1 1
No Yes Listeria monocytogenes SLCC2540   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Bacillus subtilis subsp. natto BEST195   1 1
No Yes Sulfolobus islandicus M.14.25   1 1
No Yes 1_050719N (meta-genome)   5 5
No Yes 2_050719S (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   2 2
No Yes 5_050719P (meta-genome)   1 1
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome)   1 1
No Yes Crater Hills (meta-genome)   2 2
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   10 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   5 5
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   12 12
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   2 2
No Yes NCBI 2017_08 genome   305 305
No Yes Nymph Lake Bulk Water (meta-genome)   1 1
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   2 2
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   7 7
No Yes Uniprot 2018_03 genome   194 194
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   2 2
No Yes NCBI plasmid sequences (Plasmids)   3 3
No Yes NCBI viral sequences (Viral)   16 16
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   8 8
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   16 16
No Yes TargetDB (Targets)   1 1
No Yes UniProt viral sequences (Viral)   14 14

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]