SUPERFAMILY 1.75 HMM library and genome assignments server

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YbiA-like superfamily domain assignments
in
all eukaryotic genomes

Assignment details

(show help)

25 selected genomes have 263 significant domains in 230 proteins.

Showing genomes 1 to 25 of 261
  1 2 3 4 5 6 7 8 9 10 11   Next Last

Saccoglossus kowalevskii v3.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Sakowv30029770m   9.55e-51   5-162   YbiA-like  
 
Weak hits:
Sakowv30026382m   0.0109   30-84   YbiA-like  

Strongylocentrotus purpuratus v3.1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
SPU_027594   4.18e-52   6-165   YbiA-like  

Adineta vaga has 9 significant domains in 9 proteins.

     

Sequence ID   Evalue   Region   Family  
GSADVT00005085001   4.45e-53   6-147   YbiA-like  
GSADVT00006158001   2.35e-49   2-147   YbiA-like  
GSADVT00008920001   5.62e-41   32-187   YbiA-like  
GSADVT00021170001   1.96e-41   20-183   YbiA-like  
GSADVT00040173001   7.98e-53   5-147   YbiA-like  
GSADVT00046449001   3.27e-42   31-187   YbiA-like  
GSADVT00049249001   2.22e-51   2-148   YbiA-like  
GSADVT00056318001   1.31e-41   20-183   YbiA-like  
GSADVT00064622001   3.92e-49   2-147   YbiA-like  

Crassostrea gigas 22 has 58 significant domains in 57 proteins.

     

Sequence ID   Evalue   Region   Family  
EKC17401   0.00000706   1-67   YbiA-like  
EKC17438   0.0000288   64-119   YbiA-like  
EKC17645   6.15e-27   39-198   YbiA-like  
EKC18344   0.0000000000000222   1-109   YbiA-like  
EKC18895   0.00000523   4-61   YbiA-like  
EKC19626   0.0000000209   1-66   YbiA-like  
EKC20509   6.54e-30   663-803   YbiA-like  
EKC21256   9.55e-16   150-259   YbiA-like  
EKC21258   0.0000000000000484   50-163   YbiA-like  
EKC21846   0.00000719   485-567   YbiA-like  
EKC22550   0.00000575   1-67   YbiA-like  
EKC23840   0.000000000000144   1-109   YbiA-like  
EKC24031   0.000000000000628   71-166   YbiA-like  
EKC24474   7.72e-46   60-221   YbiA-like  
EKC25641   0.0000000000000131   1-109   YbiA-like  
EKC26167   9.02e-26   1222-1381   YbiA-like  
EKC26168   1.44e-19   3-131   YbiA-like  
EKC26453   0.00000000000116   3-113   YbiA-like  
EKC26558   0.00000000837   39-106   YbiA-like  
EKC26664   0.0000000628   3-113   YbiA-like  
EKC27249   0.0000000000589   183-287   YbiA-like  
EKC27409   0.0000915   3-55   YbiA-like  
EKC28933   3.92e-19   449-592   YbiA-like  
EKC29111   4.45e-18   48-208   YbiA-like  
EKC29236   1.44e-22   225-372   YbiA-like  
EKC29712   0.0000575   1-67   YbiA-like  
EKC31477   4.84e-22   130-280   YbiA-like  
EKC31800   8.5e-44   206-359   YbiA-like  
EKC31801   2.88e-30   442-547   YbiA-like  
EKC31802   5.36e-47   307-466   YbiA-like  
  3.4e-46   892-1045   YbiA-like  
EKC31803   6.93e-47   225-385   YbiA-like  
EKC31837   0.00000000706   1-67   YbiA-like  
EKC31855   0.00000641   3-65   YbiA-like  
EKC32328   0.000000000824   2-67   YbiA-like  
EKC32523   0.00000000000000837   4-118   YbiA-like  
EKC32665   1.14e-16   1-108   YbiA-like  
EKC33259   1.57e-18   3-131   YbiA-like  
EKC33426   2.35e-21   3-128   YbiA-like  
EKC34055   6.93e-19   661-817   YbiA-like  
EKC35297   3.53e-23   5-143   YbiA-like  
EKC35584   0.00000000288   8-85   YbiA-like  
EKC36165   2.48e-49   698-855   YbiA-like  
EKC38718   3.14e-31   1-121   YbiA-like  
EKC39028   1.26e-26   144-300   YbiA-like  
EKC39041   0.0000000000471   3-113   YbiA-like  
EKC39372   9.81e-29   185-293   YbiA-like  
EKC39377   5.1e-36   127-278   YbiA-like  
EKC39885   0.0000000000235   4-87   YbiA-like  
EKC40078   0.000000327   1-73   YbiA-like  
EKC40869   2.48e-22   225-372   YbiA-like  
EKC41070   0.0000602   1-66   YbiA-like  
EKC41168   1.09e-19   20-150   YbiA-like  
EKC41369   5.1e-18   15-160   YbiA-like  
EKC41859   0.000000107   116-202   YbiA-like  
EKC42965   0.0000000000114   132-246   YbiA-like  
EKC43087   0.00000000392   1-67   YbiA-like  
EKC43138   0.0000000000000262   16-116   YbiA-like  
 
Weak hits:
EKC22549   0.0314   36-70   YbiA-like  
EKC22767   0.000119   53-128   YbiA-like  
EKC26796   0.000275   348-403   YbiA-like  
EKC29396   0.00196   3-55   YbiA-like  
EKC30872   0.000222   26-69   YbiA-like  
EKC33024   0.000102   1-70   YbiA-like  
EKC34616   0.000523   138-182   YbiA-like  
EKC40322   0.000497   8-52   YbiA-like  
EKC41890   0.00101   3-70   YbiA-like  
EKC43044   0.000745   1-67   YbiA-like  

Lottia gigantea has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Lotgi1|220498|estExt_Genewise1Plus.C_sca_620184   2.09e-47   8-165   YbiA-like  
jgi|Lotgi1|77371|gw1.15.273.1   4.05e-28   3-114   YbiA-like  

Helobdella robusta has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Helro1|151912   8.24e-45   2-151   YbiA-like  
jgi|Helro1|151965   2.09e-45   2-153   YbiA-like  
jgi|Helro1|170125   1.7e-19   22-147   YbiA-like  

Capitella sp. I has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Capca1|222927|estExt_fgenesh1_pg.C_30016   7.98e-46   10-166   YbiA-like  
  1.44e-37   204-360   YbiA-like  
jgi|Capca1|78069|gw1.1589.3.1   8.63e-39   3-154   YbiA-like  

Tetranychus urticae has 11 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
tetur01g04500   0.00000000000000523   2-69   YbiA-like  
tetur02g13650   0.00000000000000471   65-173   YbiA-like  
tetur32g00330   1.7e-16   46-180   YbiA-like  
tetur32g00940   4.84e-17   61-170   YbiA-like  
tetur32g00960   0.00000262   94-164   YbiA-like  
tetur32g00970   3.4e-16   43-162   YbiA-like  
tetur32g00980   0.00000693   65-185   YbiA-like  
tetur32g00990   0.00000000327   64-150   YbiA-like  
tetur32g01000   0.0000000000000994   29-153   YbiA-like  
tetur32g01010   0.000000000000124   56-168   YbiA-like  
tetur32g01020   0.00000000000000628   38-163   YbiA-like  
 
Weak hits:
tetur32g00950   0.000118   38-93   YbiA-like  

Pristionchus pacificus has 14 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
PPA02183   1.57e-48   62-225   YbiA-like  
PPA06176   0.0000000131   99-148   YbiA-like  
PPA06177   0.0000000000000116   1-62   YbiA-like  
  0.0000000157   68-118   YbiA-like  
PPA06919   1.57e-19   90-253   YbiA-like  
PPA07815   5.62e-19   298-447,485-504   YbiA-like  
PPA10643   1.24e-27   66-206,244-262   YbiA-like  
PPA18114   6.93e-34   16-134   YbiA-like  
PPA24678   0.00000183   2-69   YbiA-like  
PPA24693   0.00000000471   12-74   YbiA-like  
PPA26359   2.09e-32   50-185,223-242   YbiA-like  
PPA28542   1.31e-18   187-324,359-378   YbiA-like  
  3.66e-16   404-543,575-592   YbiA-like  
  0.00000000000012   4-111,142-161   YbiA-like  
 
Weak hits:
PPA00932   0.00131   6-35   YbiA-like  
PPA08613   0.0144   224-303   YbiA-like  
PPA09234   0.00111   2-106   YbiA-like  
PPA11793   0.000327   3-111   YbiA-like  

Meloidogyne incognita has 55 significant domains in 51 proteins.

     

Sequence ID   Evalue   Region   Family  
gnl|MincDB|prot:Minc00027   1.57e-27   33-175   YbiA-like  
gnl|MincDB|prot:Minc00834   5.89e-26   461-625   YbiA-like  
gnl|MincDB|prot:Minc00841   4.32e-25   33-76,106-219   YbiA-like  
gnl|MincDB|prot:Minc01503   3.53e-26   27-70,100-213   YbiA-like  
gnl|MincDB|prot:Minc02550   6.28e-35   3-160   YbiA-like  
gnl|MincDB|prot:Minc02907   0.00000000000641   1-51   YbiA-like  
gnl|MincDB|prot:Minc03468   5.23e-30   4-117   YbiA-like  
gnl|MincDB|prot:Minc05066   1.44e-30   34-187   YbiA-like  
gnl|MincDB|prot:Minc05519   4.97e-36   768-918   YbiA-like  
gnl|MincDB|prot:Minc05683   2.88e-40   5-164   YbiA-like  
gnl|MincDB|prot:Minc05787   7.45e-35   2413-2568   YbiA-like  
gnl|MincDB|prot:Minc05806   2.62e-38   6-164   YbiA-like  
gnl|MincDB|prot:Minc07045   1.44e-25   27-176   YbiA-like  
gnl|MincDB|prot:Minc07111   7.32e-31   894-1058   YbiA-like  
gnl|MincDB|prot:Minc07662   1.57e-24   83-243   YbiA-like  
gnl|MincDB|prot:Minc07738   0.000000000575   1241-1321   YbiA-like  
gnl|MincDB|prot:Minc07939   1.7e-26   29-210   YbiA-like  
gnl|MincDB|prot:Minc08887   1.44e-29   23-177   YbiA-like  
gnl|MincDB|prot:Minc09126   7.32e-24   273-432   YbiA-like  
gnl|MincDB|prot:Minc09275   0.00000000000955   164-248   YbiA-like  
gnl|MincDB|prot:Minc09531   0.000000000157   1339-1420   YbiA-like  
gnl|MincDB|prot:Minc09995   4.97e-21   230-357,385-404   YbiA-like  
  0.00000000131   23-156,185-197   YbiA-like  
  0.00000000418   411-548,580-597   YbiA-like  
gnl|MincDB|prot:Minc10057   9.94e-28   13-145   YbiA-like  
gnl|MincDB|prot:Minc10330   0.00000000000183   65-167   YbiA-like  
gnl|MincDB|prot:Minc10332   5.75e-17   896-1022   YbiA-like  
gnl|MincDB|prot:Minc10589   1.07e-29   33-170   YbiA-like  
gnl|MincDB|prot:Minc10752   2.22e-29   443-599   YbiA-like  
gnl|MincDB|prot:Minc11402   7.32e-41   17-167   YbiA-like  
gnl|MincDB|prot:Minc11539   5.89e-30   267-392   YbiA-like  
gnl|MincDB|prot:Minc11956   1.57e-33   134-271,305-323   YbiA-like  
gnl|MincDB|prot:Minc12114   2.75e-30   12-165   YbiA-like  
gnl|MincDB|prot:Minc12116   7.19e-30   4-117   YbiA-like  
gnl|MincDB|prot:Minc12624   1.44e-41   17-167   YbiA-like  
gnl|MincDB|prot:Minc12854   0.000000000157   765-859   YbiA-like  
gnl|MincDB|prot:Minc13276   1.09e-35   1-156   YbiA-like  
gnl|MincDB|prot:Minc14205   4.32e-28   160-302   YbiA-like  
gnl|MincDB|prot:Minc14316   0.0000000000353   33-114   YbiA-like  
gnl|MincDB|prot:Minc14629   4.45e-33   535-689   YbiA-like  
gnl|MincDB|prot:Minc14713   5.23e-32   1989-2153   YbiA-like  
gnl|MincDB|prot:Minc14821   1.44e-40   31-203   YbiA-like  
gnl|MincDB|prot:Minc15345   1.44e-33   12-159   YbiA-like  
gnl|MincDB|prot:Minc15411   3.66e-29   32-175   YbiA-like  
gnl|MincDB|prot:Minc15928   3.92e-40   23-167   YbiA-like  
gnl|MincDB|prot:Minc16329   2.35e-25   220-351,385-404   YbiA-like  
  0.000000000000418   22-143,174-187   YbiA-like  
  0.000000000327   412-549,581-598   YbiA-like  
gnl|MincDB|prot:Minc16798   1.57e-33   134-271,305-323   YbiA-like  
gnl|MincDB|prot:Minc16886   5.75e-21   108-239,277-296   YbiA-like  
gnl|MincDB|prot:Minc17133   6.67e-39   237-384   YbiA-like  
gnl|MincDB|prot:Minc18041   3.01e-42   109-264   YbiA-like  
gnl|MincDB|prot:Minc18448   1.24e-39   241-388   YbiA-like  
gnl|MincDB|prot:Minc18729   7.85e-37   33-204   YbiA-like  
gnl|MincDB|prot:Minc19026   5.75e-21   108-239,277-296   YbiA-like  

Meloidogyne hapla has 11 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
MhA1_Contig1224.frz3.gene8   3.4e-32   557-710   YbiA-like  
MhA1_Contig1481.frz3.gene12   0.000000000000248   146-240   YbiA-like  
MhA1_Contig1483.frz3.gene4   0.0000000000183   35-117   YbiA-like  
MhA1_Contig1544.frz3.gene13   0.000000000000353   339-450   YbiA-like  
MhA1_Contig1576.frz3.gene7   1.57e-33   133-270,304-322   YbiA-like  
MhA1_Contig1737.frz3.gene6   0.0000915   88-110   YbiA-like  
MhA1_Contig1789.frz3.gene3   2.75e-18   129-262   YbiA-like  
MhA1_Contig1952.frz3.gene2   0.00000000392   43-146   YbiA-like  
MhA1_Contig215.frz3.gene4   1.16e-24   74-234   YbiA-like  
MhA1_Contig2756.frz3.gene2   8.11e-19   120-202   YbiA-like  
MhA1_Contig965.frz3.gene7   0.00000000641   37-98   YbiA-like  

Onchocerca volvulus 22 has 9 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
OVOC10589   1.44e-27   103-246,284-304   YbiA-like  
OVOC12609   3.66e-44   3-174   YbiA-like  
OVOC1903   1.7e-26   134-297   YbiA-like  
OVOC3439   1.57e-34   102-235,269-287   YbiA-like  
OVOC4753   5.36e-43   264-430   YbiA-like  
OVOC6592   5.49e-44   3-174   YbiA-like  
OVOC8553   1.7e-23   2-138,169-186   YbiA-like  
  3.27e-22   220-351,385-402   YbiA-like  
  0.0000000000000111   431-566,598-615   YbiA-like  

Brugia malayi WS250 has 16 significant domains in 12 proteins.

     

Sequence ID   Evalue   Region   Family  
Bm2323b   8.11e-24   215-351,385-402   YbiA-like  
  2.75e-23   2-138,169-186   YbiA-like  
  0.0000000000000034   431-566,598-615   YbiA-like  
Bm2323i   7.45e-24   175-311,345-362   YbiA-like  
  0.00000000000000314   391-526,558-575   YbiA-like  
  0.000000000000011   25-98,129-146   YbiA-like  
Bm2643   6.02e-43   255-421   YbiA-like  
Bm3968b   1.83e-27   87-230,268-288   YbiA-like  
Bm3968c   1.44e-27   52-195,233-253   YbiA-like  
Bm4088   2.35e-34   122-258,292-310   YbiA-like  
Bm5973   1.1e-43   3-174   YbiA-like  
Bm8174   0.00000000000000102   28-163,195-212   YbiA-like  
Bm8176   0.00000000000157   4-52,84-101   YbiA-like  
Bm8277   1.57e-26   132-295   YbiA-like  
Bm8278   0.00000000314   39-127   YbiA-like  
Bm9204   1.44e-26   174-337   YbiA-like  

Caenorhabditis japonica has 8 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
CJA00398   4.71e-29   200-352,391-411   YbiA-like  
CJA05861   4.05e-34   120-256,290-309   YbiA-like  
CJA06091   2.62e-40   13-177   YbiA-like  
CJA06883   2.75e-34   8-174   YbiA-like  
CJA09444   3.01e-24   223-351,387-404   YbiA-like  
  5.36e-23   2-138,169-188   YbiA-like  
  9.81e-20   420-565,597-614   YbiA-like  
CJA14595   4.58e-38   12-176   YbiA-like  
 
Weak hits:
CJA25540   0.00785   5-44   YbiA-like  

Caenorhabditis brenneri has 9 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
CBN01464   1.7e-23   223-351,388-405   YbiA-like  
  4.58e-20   3-138,169-188   YbiA-like  
  1.1e-16   425-566,598-615   YbiA-like  
CBN01786   2.62e-39   17-186   YbiA-like  
CBN03510   3.14e-35   127-263,297-316   YbiA-like  
CBN09449   7.72e-32   17-188   YbiA-like  
CBN22426   2.09e-29   195-347,386-406   YbiA-like  
CBN25550   5.49e-42   2-166   YbiA-like  
CBN32347   1.57e-43   9-184   YbiA-like  
 
Weak hits:
CBN19348   0.0484   55-88   YbiA-like  

Caenorhabditis remanei has 11 significant domains in 9 proteins.

     

Sequence ID   Evalue   Region   Family  
CRE01778   6.93e-31   222-374,413-432   YbiA-like  
CRE03132   1.57e-23   227-351,387-404   YbiA-like  
  5.1e-20   423-565,597-614   YbiA-like  
  3.66e-17   2-138,169-185   YbiA-like  
CRE08681   2.88e-38   8-173   YbiA-like  
CRE12189   2.35e-34   117-267,301-320   YbiA-like  
CRE18688   1.44e-40   16-188   YbiA-like  
CRE18689   2.62e-40   13-181   YbiA-like  
CRE18939   1.29e-35   8-177   YbiA-like  
CRE23389   1.15e-41   17-187   YbiA-like  
CRE27937   0.00000667   86-125   YbiA-like  

Caenorhabditis elegans 76_235 has 15 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
C07G3.2   1.96e-43   15-184   YbiA-like  
C08E8.4   7.98e-40   5-184   YbiA-like  
C23G10.8.1   3.53e-24   223-351,387-404   YbiA-like  
  1.96e-22   2-138,169-188   YbiA-like  
  1.83e-20   421-567,599-616   YbiA-like  
C23G10.8.2   3.53e-24   223-351,387-404   YbiA-like  
  1.96e-22   2-138,169-188   YbiA-like  
  1.83e-20   421-567,599-616   YbiA-like  
C37C3.1a   4.05e-39   18-183   YbiA-like  
F40F8.11a.1   1.15e-29   219-371,410-429   YbiA-like  
F40F8.11a.2   1.15e-29   219-371,410-429   YbiA-like  
F40F8.11b.1   4.32e-30   73-225,264-283   YbiA-like  
F40F8.11b.2   4.32e-30   73-225,264-283   YbiA-like  
F44E2.8   1.96e-35   113-251,285-303   YbiA-like  
T24A6.7   1.44e-43   3-177   YbiA-like  
 
Weak hits:
C37C3.1b   0.0235   11-30   YbiA-like  

Caenorhabditis briggsae 2 has 9 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
CBG02959   1.05e-31   215-367,406-425   YbiA-like  
CBG06284   1.26e-29   15-149   YbiA-like  
CBG06909   8.63e-34   126-250,284-303   YbiA-like  
CBG20561   6.93e-35   9-178   YbiA-like  
CBG22901   4.18e-41   8-172   YbiA-like  
CBG23827   2.75e-39   16-186   YbiA-like  
CBG24263   5.49e-25   223-351,387-404   YbiA-like  
  6.15e-22   2-138,169-185   YbiA-like  
  1.31e-17   443-585,617-634   YbiA-like  
 
Weak hits:
CBG24916   0.0811   212-240   YbiA-like  

Trichinella spiralis 22 has 10 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
EFV48226   0.000000128   6-121   YbiA-like  
EFV48937   4.84e-19   40-168,203-219   YbiA-like  
  1.03e-16   267-394,435-454   YbiA-like  
EFV50474   9.94e-19   234-362,397-413   YbiA-like  
  8.24e-18   6-142,176-192   YbiA-like  
  0.0000000000144   471-538,579-598   YbiA-like  
EFV58067   1.31e-17   284-411,442-460   YbiA-like  
  9.15e-16   493-599,633-651   YbiA-like  
  0.000000000000183   22-165,203-221   YbiA-like  
  0.00000000144   913-1024,1055-1072   YbiA-like  
  0.000124   694-817,851-866   YbiA-like  

Mnemiopsis leidyi has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ML50514a-PA   2.09e-48   5-168   YbiA-like  

Thelohanellus kitauei has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
KII75096   3.66e-28   3-137   YbiA-like  

Acropora digitifera v1.0 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
adi_v1.08956   2.35e-17   64-233   YbiA-like  
adi_v1.16965   3.27e-21   65-239   YbiA-like  

Nematostella vectensis 1.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Nemve1|206998|fgenesh1_pg.scaffold_75000092   3.01e-25   3-176   YbiA-like  

Hydra vulgaris has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|449662908|ref|XP_004205641.1|   1.57e-24   33-143   YbiA-like  

Amphimedon queenslandica has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
Aqu1.203631|PACid:15702159   3.53e-35   9-122   YbiA-like  
Aqu1.217968|PACid:15716496   2.62e-47   18-173   YbiA-like  
 
Weak hits:
Aqu1.227357|PACid:15725885   0.00288   20-70   YbiA-like  

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Select to display   Genome       Domains   Proteins
No Yes ALL   29447 29447
No Yes Saccoglossus kowalevskii v3.0   1 1
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Adineta vaga   9 9
No Yes Crassostrea gigas 22 Pacific oyster 58 57
No Yes Lottia gigantea Owl limpet 2 2
No Yes Helobdella robusta   3 3
No Yes Capitella sp. I   3 2
No Yes Tetranychus urticae Two-spotted spider mite 11 11
No Yes Pristionchus pacificus   14 11
No Yes Meloidogyne incognita Southern root-knot nematode 55 51
No Yes Meloidogyne hapla   11 11
No Yes Onchocerca volvulus 22   9 7
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 16 12
No Yes Caenorhabditis japonica   8 6
No Yes Caenorhabditis brenneri   9 7
No Yes Caenorhabditis remanei   11 9
No Yes Caenorhabditis elegans 76_235 Roundworm 15 11
No Yes Caenorhabditis briggsae 2   9 7
No Yes Trichinella spiralis 22   10 4
No Yes Mnemiopsis leidyi Sea walnut 1 1
No Yes Thelohanellus kitauei   1 1
No Yes Acropora digitifera v1.0   2 2
No Yes Nematostella vectensis 1.0 Starlet sea anemone 1 1
No Yes Hydra vulgaris   1 1
No Yes Amphimedon queenslandica   2 2
No Yes Proterospongia sp. ATCC 50818   1 1
No Yes Monosiga brevicollis   1 1
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Mortierella verticillata NRRL 6337   2 2
No Yes Mucor circinelloides   1 1
No Yes Malassezia globosa CBS 7966   2 2
No Yes Sporisorium reilianum 22   1 1
No Yes Sphaerobolus stellatus v1.0   3 3
No Yes Piloderma croceum F 1598 v1.0   5 5
No Yes Serpula lacrymans var. lacrymans S7.9   8 7
No Yes Coniophora puteana   3 3
No Yes Hydnomerulius pinastri v2.0   4 4
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   4 4
No Yes Pisolithus microcarpus 441 v1.0   4 4
No Yes Pisolithus tinctorius Marx 270 v1.0   4 4
No Yes Scleroderma citrinum Foug A v1.0   4 4
No Yes Coprinopsis cinerea okayama7 130 v3   5 5
No Yes Pleurotus ostreatus Oyster mushroom 3 3
No Yes Amanita thiersii Skay4041 v1.0   11 11
No Yes Amanita muscaria Koide v1.0 Fly agaric 4 4
No Yes Galerina marginata v1.0   7 7
No Yes Hebeloma cylindrosporum h7 v2.0   3 3
No Yes Laccaria bicolor S238N-H82   6 6
No Yes Agaricus bisporus var. bisporus   2 2
No Yes Schizophyllum commune   7 7
No Yes Stereum hirsutum FP-91666 SS1 v1.0   6 6
No Yes Heterobasidion annosum   1 1
No Yes Gloeophyllum trabeumv1.0   3 3
No Yes Punctularia strigosozonata v1.0   3 3
No Yes Sebacina vermifera MAFF 305830 v1.0   9 9
No Yes Fomitiporia mediterranea v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   12 12
No Yes Postia placenta   5 5
No Yes Wolfiporia cocos MD-104 SS10 v1.0   3 3
No Yes Fomitopsis pinicolav1.0   6 6
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   5 5
No Yes Phanerochaete chrysosporium RP-78 2.1   7 5
No Yes Dichomitus squalens   2 2
No Yes Trametes versicolor v1.0   2 2
No Yes Tremella mesenterica Witches' butter 1 1
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   3 3
No Yes Podospora anserina   1 1
No Yes Sporotrichum thermophile ATCC 42464   1 1
No Yes Thielavia terrestris NRRL 8126   1 1
No Yes Chaetomium globosum CBS 148.51   1 1
No Yes Cryphonectria parasitica Chestnut blight fungus 1 1
No Yes Verticillium albo-atrum VaMs.102   2 2
No Yes Verticillium dahliae VdLs.17   3 3
No Yes Acremonium alcalophilumv 1.0   1 1
No Yes Glomerella graminicola 22   2 2
No Yes Fusarium graminearum   1 1
No Yes Nectria haematococca mpVI   3 2
No Yes Fusarium oxysporum f. sp. lycopersici 4286   2 1
No Yes Fusarium verticillioides 7600   2 1
No Yes Trichoderma asperellum CBS 433.97 v1.0   1 1
No Yes Trichoderma atroviride   1 1
No Yes Trichoderma citrinoviride v1.0   1 1
No Yes Trichoderma reesei 1.2   1 1
No Yes Trichoderma virens Gv29-8   1 1
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   1 1
No Yes Amorphotheca resinae v1.0 Creosote fungus 2 2
No Yes Sclerotinia sclerotiorum   3 3
No Yes Didymella exigua CBS 183.55 v1.0   1 1
No Yes Setosphaeria turcica v1.0   1 1
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   2 2
No Yes Cochliobolus victoriae FI3 v1.0   2 2
No Yes Cochliobolus carbonum 26-R-13 v1.0   2 2
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 1 1
No Yes Alternaria brassicicola   1 1
No Yes Cochliobolus lunatus m118 v2.0   2 2
No Yes Pyrenophora teres f. teres 22   1 1
No Yes Pyrenophora tritici-repentis   2 2
No Yes Stagonospora nodorum   3 3
No Yes Mycosphaerella graminicola IPO323   2 2
No Yes Zasmidium cellare ATCC 36951 v1.0   2 2
No Yes Dothistroma septosporum   3 3
No Yes Mycosphaerella fijiensis CIRAD86   2 2
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   3 3
No Yes Paracoccidioides brasiliensis Pb18   1 1
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   1 1
No Yes Ajellomyces dermatitidis SLH14081   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Microsporum canis CBS 113480   1 1
No Yes Trichophyton equinum CBS 127.97   1 1
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   1 1
No Yes Trichophyton tonsurans CBS 112818   1 1
No Yes Trichophyton rubrum CBS 118892   1 1
No Yes Uncinocarpus reesii 1704   1 1
No Yes Aspergillus zonatus v1.0   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus nidulans FGSC A4   1 1
No Yes Aspergillus sydowii v1.0   1 1
No Yes Aspergillus versicolor v1.0   1 1
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Aspergillus oryzae RIB40   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Penicillium marneffei ATCC 18224   1 1
No Yes Tuber melanosporum Mel28 22   2 2
No Yes Tuber melanosporum Vittad Perigord truffle 2 2
No Yes Catenaria anguillulae PL171 v1.0   6 5
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Dictyostelium discoideum   2 2
No Yes Dictyostelium purpureum   4 4
No Yes Entamoeba dispar 1.2   1 1
No Yes Entamoeba invadens 1.2   1 1
No Yes Entamoeba histolytica 1   1 1
No Yes Selaginella moellendorffii   3 3
No Yes Eucalyptus grandis v201 Rose gum 2 2
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221   4 4
No Yes Citrus clementina v165   6 6
No Yes Citrus sinensis v154 Sweet orange 1 1
No Yes Thellungiella halophila v173   1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 1 1
No Yes Capsella rubella v183   1 1
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 2 2
No Yes Carica papaya Papaya 2 2
No Yes Medicago truncatula Barrel medic 2 2
No Yes Phaseolus vulgaris v186 French bean 2 2
No Yes Glycine max v109 Soybean 2 2
No Yes Cucumis sativus v122 Cucumber 3 3
No Yes Fragaria vesca Wild strawberry 1 1
No Yes Malus domestica v196 Apple 3 3
No Yes Prunus persica v139 Peach 1 1
No Yes Linum usitatissimum v200 Flax 4 4
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Vitis vinifera Wine grape 1 1
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Actinidia chinensis Hongyang   1 1
No Yes Aquilegia coerulea v195   1 1
No Yes Triticum urartu 22   1 1
No Yes Triticum aestivum 22 Bread wheat 3 3
No Yes Aegilops tauschii 22   1 1
No Yes Brachypodium distachyon Stiff brome 1 1
No Yes Oryza barthii 22 African wild rice 1 1
No Yes Oryza meridionalis 22   1 1
No Yes Oryza glumaepatula 22   1 1
No Yes Oryza glaberrima African rice 1 1
No Yes Oryza punctata 22   1 1
No Yes Oryza nivara 22   1 1
No Yes Oryza brachyantha 22 Malo sina 1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 1 1
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 1 1
No Yes Panicum virgatum v202 Switchgrass 4 4
No Yes Setaria italica v164 Foxtail millet 2 2
No Yes Zea mays subsp. mays Maize 1 1
No Yes Zea mays v181 Maize 1 1
No Yes Sorghum bicolor Sorghum 1 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 1 1
No Yes Amborella trichopoda 22   2 2
No Yes Physcomitrella patens   4 4
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Chlorella vulgaris   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   2 2
No Yes Ostreococcus sp. RCC809   1 1
No Yes Ostreococcus lucimarinus CCE9901   1 1
No Yes Ostreococcus tauri   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Thecamonas trahens ATCC 50062   5 5
No Yes Bigelowiella natans CCMP2755 22   4 4
No Yes Cyanophora paradoxa   5 5
No Yes Leishmania mexicana 2.4   1 1
No Yes Leishmania major strain Friedlin   1 1
No Yes Leishmania infantum JPCM5 2.4   1 1
No Yes Leishmania braziliensis MHOM/BR/75/M2904 2.4   1 1
No Yes Trypanosoma vivax   2 2
No Yes Trypanosoma cruzi strain CL Brener   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Trypanosoma brucei gambiense v4.1   1 1
No Yes Trypanosoma brucei TREU927 v4.1   1 1
No Yes Ectocarpus siliculosus   4 4
No Yes Pythium iwayamai DAOM BR242034 22   1 1
No Yes Pythium arrhenomanes ATCC 12531 22   2 1
No Yes Pythium ultimum v1.7-2   1 1
No Yes Pythium aphanidermatum DAOM BR444 22   1 1
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Pythium vexans DAOM BR484 22   2 2
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Phytophthora capsici   1 1
No Yes Perkinsus marinus ATCC 50983   4 4
No Yes Paramecium tetraurelia   2 2
No Yes Tetrahymena thermophila SB210 1   4 4
No Yes Ichthyophthirius multifiliis strain G5   1 1
No Yes Neospora caninum   2 2
No Yes Toxoplasma gondii VEG   2 2
No Yes Toxoplasma gondii ME49   2 2
No Yes Toxoplasma gondii GT1   1 1
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Symbiodinium minutum clade B1 v1.2   7 7
No Yes Naegleria gruberi   5 5
No Yes Trichomonas vaginalis   1 1
No Yes Guillardia theta CCMP2712 v1.0   6 6
No Yes Emiliania huxleyi CCMP1516   11 11
No Yes Leptolyngbya sp. PCC 7376   1 1
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Acaryochloris marina MBIC11017   2 2
No Yes Thermosynechococcus sp. NK55   1 1
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Synechococcus sp. PCC 6312   1 1
No Yes Microcoleus sp. PCC 7113   2 2
No Yes Trichodesmium erythraeum IMS101   1 1
No Yes Geitlerinema sp. PCC 7407   1 1
No Yes Cyanothece sp. PCC 8802   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Halothece sp. PCC 7418   1 1
No Yes Rivularia sp. PCC 7116   2 2
No Yes Calothrix sp. PCC 7507   2 2
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes 'Nostoc azollae' 0708   1 1
No Yes Nostoc sp. PCC 7107   2 2
No Yes Nostoc punctiforme PCC 73102   2 2
No Yes Nostoc sp. PCC 7120   1 1
No Yes Nostoc sp. PCC 7524   2 2
No Yes Anabaena sp. 90   1 1
No Yes Nakamurella multipartita DSM 44233   1 1
No Yes Catenulispora acidiphila DSM 44928   2 2
No Yes Frankia symbiont of Datisca glomerata   1 1
No Yes Frankia alni ACN14a   1 1
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   1 1
No Yes Streptosporangium roseum DSM 43021   1 1
No Yes Kitasatospora setae KM-6054   1 1
No Yes Streptomyces coelicolor A3(2)   1 1
No Yes Streptomyces sp. PAMC26508   1 1
No Yes Streptomyces flavogriseus ATCC 33331   1 1
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   1 1
No Yes Streptomyces bingchenggensis BCW-1   1 1
No Yes Streptomyces avermitilis MA-4680   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces scabiei 87.22   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   1 1
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Amycolatopsis mediterranei U32   1 1
No Yes Kribbella flavida DSM 17836   1 1
No Yes Propionibacterium propionicum F0230a   1 1
No Yes Salinispora arenicola CNS-205   1 1
No Yes Salinispora tropica CNB-440   1 1
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Micromonospora sp. L5   1 1
No Yes Micromonospora aurantiaca ATCC 27029   1 1
No Yes Actinoplanes sp. N902-109   3 3
No Yes Actinoplanes sp. SE50/110   2 2
No Yes Actinoplanes missouriensis 431   2 2
No Yes Rothia dentocariosa ATCC 17931   1 1
No Yes Herpetosiphon aurantiacus DSM 785   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Deinococcus geothermalis DSM 11300   1 1
No Yes Deinococcus proteolyticus MRP   1 1
No Yes Deinococcus radiodurans R1   1 1
No Yes Ruminococcus sp.   1 1
No Yes Ruminococcus albus 7   1 1
No Yes butyrate-producing bacterium SM4/1   1 1
No Yes Candidatus Desulforudis audaxviator MP104C   1 1
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   1 1
No Yes Clostridium lentocellum DSM 5427   1 1
No Yes Eubacterium rectale M104/1   1 1
No Yes Eubacterium rectale ATCC 33656   1 1
No Yes Coprococcus sp. ART55/1   1 1
No Yes Clostridium beijerinckii NCIMB 8052   1 1
No Yes Clostridium perfringens ATCC 13124   1 1
No Yes Clostridium cellulovorans 743B   1 1
No Yes Streptococcus parasanguinis ATCC 15912   1 1
No Yes Brevibacillus brevis NBRC 100599   2 2
No Yes Paenibacillus sp. JDR-2   1 1
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Paenibacillus mucilaginosus 3016   1 1
No Yes Paenibacillus polymyxa M1   1 1
No Yes Listeria welshimeri serovar 6b str. SLCC5334   1 1
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   1 1
No Yes Haliscomenobacter hydrossis DSM 1100   2 2
No Yes Niastella koreensis GR20-10   1 1
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Flexibacter litoralis DSM 6794   1 1
No Yes Fibrella aestuarina   2 2
No Yes Spirosoma linguale DSM 74   1 1
No Yes Prevotella ruminicola 23   2 2
No Yes Solitalea canadensis DSM 3403   1 1
No Yes Capnocytophaga ochracea DSM 7271   1 1
No Yes Flavobacterium psychrophilum JIP02/86   1 1
No Yes Flavobacterium branchiophilum FL-15   1 1
No Yes Flavobacterium columnare ATCC 49512   1 1
No Yes Flavobacterium johnsoniae UW101   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Candidatus Protochlamydia amoebophila UWE25   1 1
No Yes Parachlamydia acanthamoebae UV-7   2 2
No Yes Simkania negevensis Z   3 3
No Yes Isosphaera pallida ATCC 43644   1 1
No Yes Planctomyces brasiliensis DSM 5305   1 1
No Yes Planctomyces limnophilus DSM 3776   1 1
No Yes Rhodopirellula baltica SH 1   1 1
No Yes Brachyspira murdochii DSM 12563   1 1
No Yes Brachyspira intermedia PWS/A   1 1
No Yes Brachyspira hyodysenteriae WA1   1 1
No Yes Treponema primitia ZAS-2   1 1
No Yes Sebaldella termitidis ATCC 33386   1 1
No Yes candidate division WWE3 bacterium RAAC2_WWE3_1   1 1
No Yes Bacteriovorax marinus SJ   1 1
No Yes Bdellovibrio bacteriovorus HD100   1 1
No Yes Campylobacter concisus 13826   1 1
No Yes Geobacter sp. M21   1 1
No Yes Geobacter bemidjiensis Bem   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Methylibium petroleiphilum PM1   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Ralstonia pickettii 12D   2 2
No Yes Burkholderia vietnamiensis G4   1 1
No Yes Burkholderia gladioli BSR3   3 3
No Yes Delftia sp. Cs1-4   1 1
No Yes Delftia acidovorans SPH-1   1 1
No Yes Polaromonas sp. JS666   1 1
No Yes Rhodoferax ferrireducens T118   1 1
No Yes Comamonas testosteroni CNB-2   1 1
No Yes Pusillimonas sp. T7-7   1 1
No Yes Bordetella parapertussis 12822   1 1
No Yes Bordetella bronchiseptica RB50   1 1
No Yes Magnetococcus marinus MC-1   1 1
No Yes Brevundimonas subvibrioides ATCC 15264   1 1
No Yes Erythrobacter litoralis HTCC2594   1 1
No Yes Jannaschia sp. CCS1   1 1
No Yes Ruegeria sp. TM1040   1 1
No Yes Methylocystis sp. SC2   1 1
No Yes Saccharophagus degradans 2-40   1 1
No Yes Teredinibacter turnerae T7901   1 1
No Yes Vibrio sp. Ex25   1 1
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Vibrio parahaemolyticus RIMD 2210633   1 1
No Yes Vibrio splendidus LGP32   1 1
No Yes Vibrio vulnificus MO6-24/O   1 1
No Yes Photobacterium profundum SS9   1 1
No Yes Shewanella baltica OS185   1 1
No Yes Marinobacter adhaerens HP15   1 1
No Yes Marinobacter sp. BSs20148   1 1
No Yes Hahella chejuensis KCTC 2396   2 2
No Yes Thioalkalivibrio sulfidophilus HL-EbGr7   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes Legionella pneumophila str. Corby   1 1
No Yes Xenorhabdus bovienii SS-2004   1 1
No Yes Xenorhabdus nematophila ATCC 19061   1 1
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Shigella sonnei Ss046   1 1
No Yes Shigella flexneri 5 str. 8401   1 1
No Yes Shigella boydii CDC 3083-94   1 1
No Yes Enterobacter aerogenes KCTC 2190   1 1
No Yes Escherichia fergusonii ATCC 35469   2 2
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   1 1
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   1 1
No Yes Pseudomonas protegens Pf-5   1 1
No Yes Pseudomonas aeruginosa UCBPP-PA14   1 1
No Yes Acinetobacter oleivorans DR1   1 1
No Yes Acinetobacter baumannii ATCC 17978   1 1
No Yes Methanosphaera stadtmanae DSM 3091   1 1
No Yes Methanobrevibacter ruminantium M1   1 1
No Yes Ascaris suum Victoria/Ghent Pig roundworm 10 8
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 9 7
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Coccidioides immitis RMSCC 2394   1 1
No Yes Ajellomyces dermatitidis ER-3   1 1
No Yes Histoplasma capsulatum H143   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 2 1
No Yes Hordeum vulgare 22 Domesticated barley 6 6
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Trypanosoma brucei Lister 427 v4.1   1 1
No Yes Neospora caninum Nc-Liverpool 6.2   2 2
No Yes Plasmodium falciparum Dd2   1 1
No Yes Chroococcidiopsis thermalis PCC 7203   1 1
No Yes Chamaesiphon minutus PCC 6605   4 4
No Yes Dactylococcopsis salina PCC 8305   1 1
No Yes Synechococcus sp. PCC 7002   1 1
No Yes Crinalium epipsammum PCC 9333   2 2
No Yes Oscillatoria nigro-viridis PCC 7112   2 2
No Yes Oscillatoria acuminata PCC 6304   2 2
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   1 1
No Yes Stanieria cyanosphaera PCC 7437   2 2
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Cylindrospermum stagnale PCC 7417   2 2
No Yes Anabaena cylindrica PCC 7122   3 3
No Yes Frankia sp. EuI1c   1 1
No Yes Streptomyces albus J1074   1 1
No Yes Streptomyces davawensis JCM 4913   2 2
No Yes Streptomyces fulvissimus DSM 40593   2 2
No Yes Streptomyces venezuelae ATCC 10712   1 1
No Yes Streptomyces collinus Tu 365   1 1
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   1 1
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Amycolatopsis mediterranei RB   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis orientalis HCCB10007   2 2
No Yes Actinoplanes friuliensis DSM 7358   1 1
No Yes Nocardia brasiliensis ATCC 700358   2 2
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   3 3
No Yes Roseburia intestinalis XB6B4   1 1
No Yes Clostridium sp. SY8519   2 2
No Yes Clostridium saccharobutylicum DSM 13864   2 2
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   2 2
No Yes Clostridium perfringens SM101   2 2
No Yes Clostridium perfringens str. 13   1 1
No Yes Clostridium botulinum B1 str. Okra   1 1
No Yes Clostridium botulinum Ba4 str. 657   1 1
No Yes Enterococcus mundtii QU 25   1 1
No Yes Streptococcus oligofermentans AS 1.3089   1 1
No Yes Paenibacillus sp. Y412MC10   1 1
No Yes Paenibacillus mucilaginosus KNP414   1 1
No Yes Paenibacillus mucilaginosus K02   1 1
No Yes Paenibacillus polymyxa CR1   1 1
No Yes Paenibacillus polymyxa SC2   1 1
No Yes Paenibacillus polymyxa E681   1 1
No Yes Listeria monocytogenes EGD sequence   1 1
No Yes Listeria monocytogenes serotype 4b str. LL195   1 1
No Yes Listeria monocytogenes 07PF0776   1 1
No Yes Listeria monocytogenes M7   3 3
No Yes Listeria monocytogenes J1-220   1 1
No Yes Listeria monocytogenes SLCC2376   1 1
No Yes Listeria monocytogenes SLCC5850   1 1
No Yes Listeria monocytogenes ATCC 19117   1 1
No Yes Listeria monocytogenes L312   1 1
No Yes Listeria monocytogenes SLCC7179   1 1
No Yes Listeria monocytogenes SLCC2540   1 1
No Yes Listeria monocytogenes SLCC2378   1 1
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   1 1
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   2 2
No Yes Listeria monocytogenes L99   3 3
No Yes Listeria monocytogenes HCC23   3 3
No Yes Listeria monocytogenes 10403S   1 1
No Yes Listeria monocytogenes Finland 1998   1 1
No Yes Listeria monocytogenes serotype 4b str. F2365   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Brachyspira pilosicoli B2904   1 1
No Yes Fusobacterium nucleatum subsp. animalis 4_8   1 1
No Yes Bdellovibrio exovorus JSS   1 1
No Yes Bdellovibrio bacteriovorus str. Tiberius   1 1
No Yes Desulfobacula toluolica Tol2   1 1
No Yes Sorangium cellulosum So0157-2   2 2
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Burkholderia ambifaria MC40-6   1 1
No Yes Bordetella parapertussis Bpp5   1 1
No Yes Bordetella bronchiseptica MO149   1 1
No Yes Bordetella bronchiseptica 253   1 1
No Yes Bradyrhizobium oligotrophicum S58   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   1 1
No Yes Vibrio parahaemolyticus BB22OP   1 1
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   1 1
No Yes Vibrio vulnificus CMCP6   1 1
No Yes Vibrio vulnificus YJ016   1 1
No Yes Shewanella baltica OS678   1 1
No Yes Shewanella baltica OS195   1 1
No Yes Thalassolituus oleivorans MIL-1   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Legionella pneumophila str. Paris   1 1
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Shigella sonnei 53G   1 1
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella flexneri 2a str. 2457T   1 1
No Yes Shigella flexneri 2a str. 301   1 1
No Yes Shigella boydii Sb227   1 1
No Yes Escherichia coli E24377A   1 1
No Yes Escherichia coli JJ1886   1 1
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli APEC O78   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2050   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   1 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli NA114   1 1
No Yes Escherichia coli P12b   1 1
No Yes Escherichia coli str. 'clone D i2'   1 1
No Yes Escherichia coli str. 'clone D i14'   1 1
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli IHE3034   1 1
No Yes Escherichia coli UMNK88   1 1
No Yes Escherichia coli ABU 83972   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli ED1a   1 1
No Yes Escherichia coli UMN026   1 1
No Yes Escherichia coli 55989   1 1
No Yes Escherichia coli S88   1 1
No Yes Escherichia coli IAI1   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli ATCC 8739   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SMS-3-5   1 1
No Yes Escherichia coli SE15   1 1
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli APEC O1   1 1
No Yes Escherichia coli O103:H2 str. 12009   1 1
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli 536   1 1
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli O26:H11 str. 11368   1 1
No Yes Escherichia coli CFT073   1 1
No Yes Escherichia coli O111:H- str. 11128   1 1
No Yes Escherichia coli O127:H6 str. E2348/69   1 1
No Yes Escherichia coli str. K-12 substr. MDS42   1 1
No Yes Escherichia coli BW2952   1 1
No Yes Escherichia coli str. K-12 substr. MG1655   1 1
No Yes Escherichia coli str. K-12 substr. W3110   1 1
No Yes Escherichia coli str. K-12 substr. DH10B   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Pseudomonas protegens CHA0   1 1
No Yes Pseudomonas mendocina NK-01   1 1
No Yes Pseudomonas aeruginosa SCV20265   1 1
No Yes Pseudomonas aeruginosa MTB-1   1 1
No Yes Pseudomonas aeruginosa LES431   1 1
No Yes Pseudomonas aeruginosa RP73   1 1
No Yes Pseudomonas aeruginosa B136-33   1 1
No Yes Pseudomonas aeruginosa PA1R   1 1
No Yes Pseudomonas aeruginosa PA1   1 1
No Yes Pseudomonas aeruginosa DK2   1 1
No Yes Pseudomonas aeruginosa NCGM2.S1   1 1
No Yes Pseudomonas aeruginosa M18   1 1
No Yes Pseudomonas aeruginosa LESB58   1 1
No Yes Pseudomonas aeruginosa PA7   2 2
No Yes Pseudomonas aeruginosa PAO1   1 1
No Yes Acinetobacter genomosp. 13TU RUH2624   1 1
No Yes Acinetobacter calcoaceticus ruh2202   1 1
No Yes Acinetobacter baumannii ZW85-1   1 1
No Yes Acinetobacter baumannii TYTH-1   1 1
No Yes Acinetobacter baumannii BJAB0868   1 1
No Yes Acinetobacter baumannii BJAB0715   1 1
No Yes Acinetobacter baumannii BJAB07104   1 1
No Yes Acinetobacter baumannii TCDC-AB0715   1 1
No Yes Acinetobacter baumannii D1279779   1 1
No Yes Acinetobacter baumannii MDR-TJ   1 1
No Yes Acinetobacter baumannii 1656-2   1 1
No Yes Acinetobacter baumannii ATCC 19606   1 1
No Yes Acinetobacter baumannii SDF   1 1
No Yes Acinetobacter baumannii MDR-ZJ06   1 1
No Yes Acinetobacter baumannii ACICU   1 1
No Yes Loa loa v3.3 (Request) Eye worm 11 9
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 8 6
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 10 9
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Malus x domestica (Duplicate) Apple 3 3
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   2 2
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Phoenix dactylifera (Early draft) Date palm 1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes Caenorhabditis elegans 69_215 Roundworm 9 7
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 4_Deep_abyss (meta-genome)   1 1
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   2 2
No Yes Combined (meta-genome)   6 6
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   1 1
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   5 5
No Yes Dump top (Dump top) (meta-genome)   6 6
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   5 5
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   5 5
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Human Gut Community Subject 8 (meta-genome)   2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   10 10
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   4 4
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   2 2
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes Mouse Gut Community ob2 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   19983 19949
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   8 7
No Yes Protozoadb 2010_08 (Protozoadb)   25 25
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   5 5
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   3 3
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   2 2
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Sludge/US, Jazz Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   9 9
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   5 5
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   5 5
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   10 10
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   6 6
No Yes STRING v9.0.5 (STRING)   252 242
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   1 1
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   4 4
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   3 3
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   6584 6236
No Yes Global Ocean Sampling Expedition (GOS)   140 140
No Yes NCBI plasmid sequences (Plasmids)   22 22
No Yes NCBI viral sequences (Viral)   105 105
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   1 1
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   2 2
No Yes TargetDB (Targets)   23 19
No Yes UniProt viral sequences (Viral)   138 138

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