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Heme iron utilization protein-like superfamily domain assignments
in
Catenulispora acidiphila DSM 44928


No domain assignments for these genomes.


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Select to display   Genome       Domains   Proteins
No Yes ALL   32785 32785
No Yes Capitella sp. I   1 1
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 1 1
No Yes Caenorhabditis japonica   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Cyanidioschyzon merolae strain 10D 22   1 1
No Yes Cyanidioschyzon merolae   1 1
No Yes Porphyridium purpureum 02_2012   1 1
No Yes Ectocarpus siliculosus   1 1
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Thermosynechococcus sp. NK55   1 1
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Synechococcus sp. PCC 7502   1 1
No Yes Synechococcus sp. PCC 6312   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Trichodesmium erythraeum IMS101   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Gloeobacter violaceus PCC 7421   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes 'Nostoc azollae' 0708   1 1
No Yes Nostoc sp. PCC 7107   1 1
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Nostoc sp. PCC 7120   1 1
No Yes Nostoc sp. PCC 7524   1 1
No Yes Anabaena sp. 90   1 1
No Yes Segniliparus rotundus DSM 44985   1 1
No Yes Gordonia sp. KTR9   1 1
No Yes Gordonia polyisoprenivorans VH2   1 1
No Yes Gordonia bronchialis DSM 43247   1 1
No Yes Rhodococcus erythropolis PR4   1 1
No Yes Mycobacterium abscessus ATCC 19977   1 1
No Yes Saprospira grandis str. Lewin   1 1
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Salinibacter ruber M8   1 1
No Yes Belliella baltica DSM 15883   1 1
No Yes Cyclobacterium marinum DSM 745   1 1
No Yes Fibrella aestuarina   1 1
No Yes Leadbetterella byssophila DSM 17132   1 1
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Cytophaga hutchinsonii ATCC 33406   1 1
No Yes Fluviicola taffensis DSM 16823   1 1
No Yes Zunongwangia profunda SM-A87   1 1
No Yes Weeksella virosa DSM 16922   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   1 1
No Yes Desulfurispirillum indicum S5   1 1
No Yes Denitrovibrio acetiphilus DSM 12809   1 1
No Yes Candidatus Chloracidobacterium thermophilum B   1 1
No Yes Candidatus Nitrospira defluvii   1 1
No Yes Leptospirillum ferrooxidans C2-3   1 1
No Yes Campylobacter curvus 525.92   1 1
No Yes Stigmatella aurantiaca DW4/3-1   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Laribacter hongkongensis HLHK9   2 2
No Yes Chromobacterium violaceum ATCC 12472   1 1
No Yes Rubrivivax gelatinosus IL144   1 1
No Yes Cupriavidus metallidurans CH34   1 1
No Yes Burkholderia thailandensis E264   1 1
No Yes Burkholderia pseudomallei 1106a   1 1
No Yes Burkholderia mallei SAVP1   1 1
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Burkholderia cenocepacia HI2424   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia gladioli BSR3   1 1
No Yes Verminephrobacter eiseniae EF01-2   1 1
No Yes Delftia sp. Cs1-4   1 1
No Yes Delftia acidovorans SPH-1   1 1
No Yes Comamonas testosteroni CNB-2   1 1
No Yes Janthinobacterium sp. Marseille   1 1
No Yes Herbaspirillum seropedicae SmR1   1 1
No Yes Advenella kashmirensis WT001   1 1
No Yes Bordetella avium 197N   1 1
No Yes Bordetella pertussis Tohama I   1 1
No Yes Bordetella parapertussis 12822   1 1
No Yes Bordetella bronchiseptica RB50   1 1
No Yes Achromobacter xylosoxidans A8   1 1
No Yes Achromobacter xylosoxidans   1 1
No Yes Methylovorus sp. MP688   1 1
No Yes Methylovorus glucosetrophus SIP3-4   1 1
No Yes Methylobacillus flagellatus KT   1 1
No Yes Dinoroseobacter shibae DFL 12   1 1
No Yes Pseudovibrio sp. FO-BEG1   1 1
No Yes Jannaschia sp. CCS1   1 1
No Yes Ruegeria sp. TM1040   1 1
No Yes Ketogulonicigenium vulgare Y25   2 2
No Yes Ketogulonigenium vulgarum WSH-001   1 1
No Yes Roseobacter denitrificans OCh 114   1 1
No Yes Rhodobacter sphaeroides ATCC 17029   1 1
No Yes Rhodobacter capsulatus SB 1003   3 3
No Yes Paracoccus denitrificans PD1222   1 1
No Yes Rhodospirillum photometricum DSM 122   1 1
No Yes Tistrella mobilis KA081020-065   1 1
No Yes Rhodospirillum centenum SW   2 2
No Yes Azospirillum lipoferum 4B   2 2
No Yes Azospirillum brasilense Sp245   2 2
No Yes Polymorphum gilvum SL003B-26A1   1 1
No Yes Parvibaculum lavamentivorans DS-1   1 1
No Yes Ochrobactrum anthropi ATCC 49188   1 1
No Yes Sinorhizobium fredii NGR234   1 1
No Yes Sinorhizobium medicae WSM419   1 1
No Yes Sinorhizobium meliloti AK83   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   1 1
No Yes Rhizobium etli CIAT 652   1 1
No Yes Rhizobium leguminosarum bv. viciae 3841   1 1
No Yes Agrobacterium tumefaciens str. C58   1 1
No Yes Agrobacterium radiobacter K84   1 1
No Yes Agrobacterium sp. H13-3   1 1
No Yes Agrobacterium vitis S4   1 1
No Yes Mesorhizobium opportunistum WSM2075   2 2
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   2 2
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Rhodomicrobium vannielii ATCC 17100   2 2
No Yes Hyphomicrobium sp. MC1   1 1
No Yes Hyphomicrobium denitrificans ATCC 51888   2 2
No Yes Oligotropha carboxidovorans OM4   1 1
No Yes Rhodopseudomonas palustris BisA53   1 1
No Yes Nitrobacter winogradskyi Nb-255   1 1
No Yes Bradyrhizobium japonicum USDA 110   1 1
No Yes Bartonella tribocorum CIP 105476   1 1
No Yes Bartonella clarridgeiae 73   1 1
No Yes Bartonella henselae str. Houston-1   1 1
No Yes Bartonella grahamii as4aup   1 1
No Yes Bartonella quintana str. Toulouse   1 1
No Yes Bartonella bacilliformis KC583   1 1
No Yes Haemophilus somnus 129PT   1 1
No Yes Gallibacterium anatis UMN179   1 1
No Yes Pasteurella multocida subsp. multocida str. 3480   1 1
No Yes Haemophilus parasuis SH0165   1 1
No Yes Haemophilus ducreyi 35000HP   1 1
No Yes Actinobacillus pleuropneumoniae serovar 5b str. L20   1 1
No Yes Aeromonas veronii B565   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Aliivibrio salmonicida LFI1238   1 1
No Yes Vibrio fischeri MJ11   1 1
No Yes Vibrio sp. Ex25   1 1
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Vibrio parahaemolyticus RIMD 2210633   1 1
No Yes Vibrio splendidus LGP32   1 1
No Yes Vibrio anguillarum 775   1 1
No Yes Vibrio furnissii NCTC 11218   1 1
No Yes Vibrio vulnificus MO6-24/O   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Photobacterium profundum SS9   1 1
No Yes Ferrimonas balearica DSM 9799   2 2
No Yes Shewanella piezotolerans WP3   1 1
No Yes Shewanella halifaxensis HAW-EB4   1 1
No Yes Shewanella denitrificans OS217   1 1
No Yes Shewanella pealeana ATCC 700345   1 1
No Yes Shewanella oneidensis MR-1   1 1
No Yes Shewanella baltica OS185   1 1
No Yes Shewanella woodyi ATCC 51908   1 1
No Yes Shewanella violacea DSS12   1 1
No Yes Shewanella putrefaciens CN-32   1 1
No Yes Pseudoalteromonas haloplanktis TAC125   1 1
No Yes Marinobacter adhaerens HP15   1 1
No Yes Hahella chejuensis KCTC 2396   1 1
No Yes Alcanivorax borkumensis SK2   1 1
No Yes Marinomonas sp. MWYL1   1 1
No Yes Marinomonas mediterranea MMB-1   1 1
No Yes Halomonas elongata DSM 2581   1 1
No Yes Methylomicrobium alcaliphilum   2 2
No Yes Methylomonas methanica MC09   1 1
No Yes Methylococcus capsulatus str. Bath   2 2
No Yes Rhodanobacter denitrificans   1 1
No Yes Frateuria aurantia DSM 6220   2 2
No Yes Stenotrophomonas maltophilia K279a   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas oryzae pv. oryzae PXO99A   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Halorhodospira halophila SL1   1 1
No Yes Allochromatium vinosum DSM 180   2 2
No Yes Thiocystis violascens DSM 198   2 2
No Yes Nitrosococcus watsonii C-113   1 1
No Yes Nitrosococcus halophilus Nc4   1 1
No Yes Nitrosococcus oceani ATCC 19707   1 1
No Yes Photorhabdus asymbiotica   1 1
No Yes Photorhabdus luminescens subsp. laumondii TTO1   1 1
No Yes Xenorhabdus bovienii SS-2004   1 1
No Yes Xenorhabdus nematophila ATCC 19061   1 1
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Proteus mirabilis HI4320   1 1
No Yes Edwardsiella ictaluri 93-146   2 2
No Yes Edwardsiella tarda EIB202   2 2
No Yes Rahnella sp. Y9602   2 2
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Yersinia pseudotuberculosis IP 31758   2 2
No Yes Yersinia pestis Pestoides F   2 2
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   3 3
No Yes Serratia sp. AS12   1 1
No Yes Serratia plymuthica AS9   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Dickeya dadantii Ech703   1 1
No Yes Dickeya zeae Ech1591   2 2
No Yes Pectobacterium wasabiae WPP163   2 2
No Yes Pectobacterium sp. SCC3193   2 2
No Yes Pectobacterium atrosepticum SCRI1043   2 2
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   2 2
No Yes Sodalis glossinidius str. 'morsitans'   1 1
No Yes Pantoea sp. At-9b   1 1
No Yes Pantoea vagans C9-1   1 1
No Yes Erwinia tasmaniensis Et1/99   1 1
No Yes Erwinia sp. Ejp617   1 1
No Yes Erwinia billingiae Eb661   1 1
No Yes Erwinia pyrifoliae Ep1/96   1 1
No Yes Erwinia amylovora ATCC 49946   1 1
No Yes Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)   1 1
No Yes Enterobacteriaceae bacterium strain FGI 57   2 2
No Yes Shigella dysenteriae Sd197   2 2
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Klebsiella oxytoca E718   1 1
No Yes Klebsiella variicola At-22   1 1
No Yes Klebsiella pneumoniae NTUH-K2044   1 1
No Yes Enterobacter aerogenes KCTC 2190   1 1
No Yes Enterobacter sp. 638   1 1
No Yes Enterobacter asburiae LF7a   1 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   1 1
No Yes Citrobacter koseri ATCC BAA-895   2 2
No Yes Pseudomonas aeruginosa UCBPP-PA14   1 1
No Yes Psychrobacter sp. G   1 1
No Yes Psychrobacter sp. PRwf-1   1 1
No Yes Cenarchaeum symbiosum A   1 1
No Yes Candidatus Nitrosopumilus sp. AR2   1 1
No Yes Nitrosopumilus maritimus SCM1   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Chroococcidiopsis thermalis PCC 7203   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Arthrospira platensis NIES-39   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Cylindrospermum stagnale PCC 7417   1 1
No Yes Anabaena cylindrica PCC 7122   1 1
No Yes Rhodococcus erythropolis CCM2595   1 1
No Yes Mycobacterium abscessus subsp. bolletii 50594   1 1
No Yes Salinibacter ruber DSM 13855   1 1
No Yes Echinicola vietnamensis DSM 17526   1 1
No Yes Singulisphaera acidiphila DSM 18658   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   1 1
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Pandoraea pnomenusa 3kgm   1 1
No Yes Ralstonia solanacearum FQY_4   1 1
No Yes Ralstonia solanacearum Po82   1 1
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Ralstonia solanacearum GMI1000   1 1
No Yes Burkholderia thailandensis MSMB121   1 1
No Yes Burkholderia pseudomallei MSHR305   1 1
No Yes Burkholderia pseudomallei NCTC 13179   1 1
No Yes Burkholderia pseudomallei BPC006   1 1
No Yes Burkholderia pseudomallei 1026b   1 1
No Yes Burkholderia pseudomallei 668   1 1
No Yes Burkholderia pseudomallei 1710b   1 1
No Yes Burkholderia pseudomallei K96243   1 1
No Yes Burkholderia mallei NCTC 10229   1 1
No Yes Burkholderia mallei NCTC 10247   1 1
No Yes Burkholderia mallei ATCC 23344   1 1
No Yes Burkholderia lata   1 1
No Yes Burkholderia ambifaria MC40-6   1 1
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Burkholderia cenocepacia AU 1054   1 1
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Variovorax paradoxus EPS   1 1
No Yes Bordetella pertussis CS   1 1
No Yes Bordetella parapertussis 18323   1 1
No Yes Bordetella parapertussis Bpp5   1 1
No Yes Bordetella bronchiseptica MO149   1 1
No Yes Bordetella bronchiseptica 253   1 1
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   1 1
No Yes Phaeobacter gallaeciensis DSM 26640   1 1
No Yes Octadecabacter antarcticus 307   1 1
No Yes Rhodobacter sphaeroides ATCC 17025   1 1
No Yes Rhodobacter sphaeroides 2.4.1   1 1
No Yes Paracoccus aminophilus JCM 7686   2 2
No Yes Sinorhizobium fredii USDA 257   1 1
No Yes Sinorhizobium fredii HH103   1 1
No Yes Sinorhizobium meliloti 2011   1 1
No Yes Sinorhizobium meliloti GR4   1 1
No Yes Sinorhizobium meliloti Rm41   1 1
No Yes Sinorhizobium meliloti SM11   1 1
No Yes Sinorhizobium meliloti BL225C   1 1
No Yes Sinorhizobium meliloti 1021   1 1
No Yes Rhizobium etli CFN 42   1 1
No Yes Rhizobium etli bv. mimosae str. Mim1   1 1
No Yes Rhizobium tropici CIAT 899   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   1 1
No Yes Mesorhizobium australicum WSM2073   2 2
No Yes Hyphomicrobium nitrativorans NL23   2 2
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Oligotropha carboxidovorans OM5   1 1
No Yes Rhodopseudomonas palustris DX-1   1 1
No Yes Rhodopseudomonas palustris TIE-1   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Rhodopseudomonas palustris BisB5   1 1
No Yes Rhodopseudomonas palustris BisB18   1 1
No Yes Rhodopseudomonas palustris CGA009   1 1
No Yes Bradyrhizobium sp. S23321   1 1
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Bartonella australis Aust/NH1   1 1
No Yes Bartonella vinsonii subsp. berkhoffii str. Winnie   1 1
No Yes Bartonella quintana RM-11   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   1 1
No Yes Bibersteinia trehalosi USDA-ARS-USMARC-192   1 1
No Yes Haemophilus somnus 2336   1 1
No Yes Mannheimia haemolytica USMARC_2286   2 2
No Yes Mannheimia haemolytica M42548   2 2
No Yes Mannheimia haemolytica D174   2 2
No Yes Mannheimia haemolytica D171   2 2
No Yes Mannheimia haemolytica D153   2 2
No Yes Mannheimia haemolytica USDA-ARS-USMARC-183   2 2
No Yes Mannheimia haemolytica USDA-ARS-USMARC-185   2 2
No Yes Pasteurella multocida 36950   1 1
No Yes Pasteurella multocida subsp. multocida str. HN06   1 1
No Yes Pasteurella multocida subsp. multocida str. Pm70   1 1
No Yes Haemophilus parasuis ZJ0906   1 1
No Yes Actinobacillus suis H91-0380   1 1
No Yes Actinobacillus pleuropneumoniae serovar 3 str. JL03   1 1
No Yes Actinobacillus pleuropneumoniae serovar 7 str. AP76   1 1
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Vibrio fischeri ES114   1 1
No Yes Vibrio sp. EJY3   1 1
No Yes Vibrio parahaemolyticus BB22OP   1 1
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   1 1
No Yes Vibrio anguillarum Listonella anguillarum M3   1 1
No Yes Vibrio nigripulchritudo VibrioScope   1 1
No Yes Vibrio vulnificus CMCP6   1 1
No Yes Vibrio vulnificus YJ016   1 1
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   1 1
No Yes Shewanella sp. W3-18-1   1 1
No Yes Shewanella sp. ANA-3   1 1
No Yes Shewanella baltica BA175   1 1
No Yes Shewanella baltica OS678   1 1
No Yes Shewanella baltica OS117   1 1
No Yes Shewanella baltica OS223   1 1
No Yes Shewanella baltica OS195   1 1
No Yes Shewanella baltica OS155   1 1
No Yes Shewanella putrefaciens 200   1 1
No Yes Alcanivorax dieselolei B5   1 1
No Yes Stenotrophomonas maltophilia D457   1 1
No Yes Stenotrophomonas maltophilia JV3   1 1
No Yes Stenotrophomonas maltophilia R551-3   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas oryzae pv. oryzicola BLS256   1 1
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   1 1
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Thioalkalivibrio nitratireducens DSM 14787   2 2
No Yes Proteus mirabilis BB2000   1 1
No Yes Morganella morganii subsp. morganii KT   1 1
No Yes Edwardsiella tarda C07-087   2 2
No Yes Edwardsiella tarda FL6-60   2 2
No Yes Rahnella aquatilis HX2   2 2
No Yes Yersinia pseudotuberculosis PB1/+   2 2
No Yes Yersinia pseudotuberculosis YPIII   2 2
No Yes Yersinia pseudotuberculosis IP 32953   2 2
No Yes Yersinia pestis biovar Microtus str. 91001   2 2
No Yes Yersinia pestis A1122   2 2
No Yes Yersinia pestis Z176003   2 2
No Yes Yersinia pestis D182038   2 2
No Yes Yersinia pestis D106004   2 2
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   2 2
No Yes Yersinia pestis Nepal516   2 2
No Yes Yersinia pestis Antiqua   2 2
No Yes Yersinia pestis Angola   2 2
No Yes Yersinia pestis CO92   2 2
No Yes Yersinia pestis KIM10+   2 2
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   3 3
No Yes Yersinia enterocolitica subsp. palearctica Y11   3 3
No Yes Serratia sp. AS13   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Serratia plymuthica 4Rx13   1 1
No Yes Serratia marcescens FGI94   1 1
No Yes Serratia marcescens WW4   1 1
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Dickeya dadantii 3937   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   2 2
No Yes Erwinia pyrifoliae DSM 12163   1 1
No Yes Erwinia amylovora CFBP1430   1 1
No Yes Raoultella ornithinolytica B6   1 1
No Yes Shigella dysenteriae 1617   2 2
No Yes Salmonella bongori N268-08   1 1
No Yes Klebsiella oxytoca KCTC 1686   1 1
No Yes Klebsiella pneumoniae JM45   1 1
No Yes Klebsiella pneumoniae CG43   1 1
No Yes Klebsiella pneumoniae KCTC 2242   1 1
No Yes Klebsiella pneumoniae 342   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   1 1
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   1 1
No Yes Enterobacter aerogenes EA1509E   1 1
No Yes Escherichia coli E. coli PMV-1   2 2
No Yes Escherichia coli JJ1886   2 2
No Yes Escherichia coli O7:K1 str. CE10   2 2
No Yes Escherichia coli NA114   2 2
No Yes Escherichia coli str. 'clone D i2'   2 2
No Yes Escherichia coli str. 'clone D i14'   2 2
No Yes Escherichia coli UM146   2 2
No Yes Escherichia coli 042   2 2
No Yes Escherichia coli Xuzhou21   2 2
No Yes Escherichia coli IHE3034   2 2
No Yes Escherichia coli O83:H1 str. NRG 857C   2 2
No Yes Escherichia coli ABU 83972   2 2
No Yes Escherichia coli LF82   2 2
No Yes Escherichia coli ED1a   2 2
No Yes Escherichia coli IAI39   2 2
No Yes Escherichia coli UMN026   2 2
No Yes Escherichia coli S88   2 2
No Yes Escherichia coli SMS-3-5   2 2
No Yes Escherichia coli SE15   2 2
No Yes Escherichia coli APEC O1   2 2
No Yes Escherichia coli UTI89   2 2
No Yes Escherichia coli 536   2 2
No Yes Escherichia coli O55:H7 str. RM12579   2 2
No Yes Escherichia coli O55:H7 str. CB9615   2 2
No Yes Escherichia coli CFT073   2 2
No Yes Escherichia coli O127:H6 str. E2348/69   2 2
No Yes Escherichia coli O157:H7 str. TW14359   2 2
No Yes Escherichia coli O157:H7 str. EC4115   2 2
No Yes Escherichia coli O157:H7 str. Sakai   2 2
No Yes Escherichia coli O157:H7 str. EDL933   2 2
No Yes Enterobacter cloacae SCF1   1 1
No Yes Enterobacter cloacae EcWSU1   1 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   1 1
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   1 1
No Yes Pseudomonas resinovorans NBRC 106553   1 1
No Yes Pseudomonas mendocina NK-01   1 1
No Yes Pseudomonas aeruginosa SCV20265   1 1
No Yes Pseudomonas aeruginosa MTB-1   1 1
No Yes Pseudomonas aeruginosa LES431   1 1
No Yes Pseudomonas aeruginosa B136-33   1 1
No Yes Pseudomonas aeruginosa PA1R   1 1
No Yes Pseudomonas aeruginosa PA1   1 1
No Yes Pseudomonas aeruginosa DK2   1 1
No Yes Pseudomonas aeruginosa NCGM2.S1   1 1
No Yes Pseudomonas aeruginosa M18   1 1
No Yes Pseudomonas aeruginosa LESB58   1 1
No Yes Pseudomonas aeruginosa PA7   1 1
No Yes Pseudomonas aeruginosa PAO1   1 1
No Yes Methylophaga sp. JAM7   1 1
No Yes Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1   1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes 1_050719N (meta-genome)   1 1
No Yes 2_050719S (meta-genome)   1 1
No Yes 3_050719R (meta-genome)   2 2
No Yes 4_050719Q (meta-genome)   6 6
No Yes 5_050719P (meta-genome)   1 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   12 12
No Yes Bath Hot Springs, planktonic community (meta-genome)   2 2
No Yes Combined (meta-genome)   38 38
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   27 27
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   7 7
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   10 10
No Yes Dump bottom (Dump bottom) (meta-genome)   26 26
No Yes Dump top (Dump top) (meta-genome)   41 41
No Yes Endophytic microbiome from Rice (meta-genome)   3 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   4 4
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   17 17
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   39 39
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   37 37
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   1 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   3 3
No Yes NCBI 2017_08 genome   26430 26423
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   5 5
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   9 9
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   4 4
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   1 1
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Sludge/US, Jazz Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   5 5
No Yes STRING v9.0.5 (STRING)   234 234
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   2 2
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   4737 4731
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   46 46
No Yes NCBI plasmid sequences (Plasmids)   18 18
No Yes PDB chains (SCOP 1.75) (PDB)   5 5
No Yes Protein Data Bank (all PDB sequenc)   25 25
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   87 87
No Yes TargetDB (Targets)   17 17

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