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Maleylpyruvate isomerase-like family domain assignments
in
all bacterial genomes

Assignment details

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25 selected genomes have 25 significant domains in 25 proteins.

Showing genomes 1 to 25 of 25
  1  

Acidimicrobium ferrooxidans DSM 10331 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|256371100|ref|YP_003108924.1|   1.25e-38   0.0000948   73-225   2nsf A:1-160  

Saccharomonospora viridis DSM 43017 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|257056076|ref|YP_003133908.1|   3.66e-47   0.0000134   22-177   2nsf A:1-160  
 
Weak hits:
gi|257055676|ref|YP_003133508.1|   1.19e-34   0.045   1-155   2nsf A:1-160  

Pseudonocardia dioxanivorans CB1190 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|331698815|ref|YP_004335054.1|   1.46e-40   0.0000694   5-155   2nsf A:1-160  
 
Weak hits:
gi|331697756|ref|YP_004333995.1|   6.59e-40   0.00011   4-154   2nsf A:1-160  
gi|331698178|ref|YP_004334417.1|   0.000000000000183   0.096   9-145   2nsf A:1-160  
gi|331698290|ref|YP_004334529.1|   3.2e-16   0.061   3-139   2nsf A:1-160  
gi|331698415|ref|YP_004334654.1|   0.0000000000142   0.059   5-113   2nsf A:1-160  
gi|331699459|ref|YP_004335698.1|   4.27e-21   0.063   3-142   2nsf A:1-160  

Rhodococcus jostii RHA1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|111018861|ref|YP_701833.1|   2.56e-45   0.00000541   6-154   2nsf A:1-160  
 
Weak hits:
gi|111017376|ref|YP_700348.1|   1.59e-20   0.056   4-133   2nsf A:1-160  
gi|111018585|ref|YP_701557.1|   1.08e-33   0.058   4-159   2nsf A:1-160  
gi|111018931|ref|YP_701903.1|   6.87e-38   0.07   1-153   2nsf A:1-160  
gi|111020591|ref|YP_703563.1|   2.29e-33   0.0035   22-170   2nsf A:1-160  
gi|111020785|ref|YP_703757.1|   0.00000000000382   0.075   6-174   2nsf A:1-160  
gi|111021105|ref|YP_704077.1|   0.000000000224   0.062   142-268   2nsf A:1-160  
gi|111021396|ref|YP_704368.1|   1.68e-24   0.077   7-147   2nsf A:1-160  

Rhodococcus equi 103S has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|312141514|ref|YP_004008850.1|   1.49e-44   0.00000767   4-156   2nsf A:1-160  
 
Weak hits:
gi|312137633|ref|YP_004004969.1|   2.14e-21   0.0091   8-134   2nsf A:1-160  
gi|312140991|ref|YP_004008327.1|   1.83e-36   0.049   1-152   2nsf A:1-160  

Rhodococcus opacus B4 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|226360956|ref|YP_002778734.1|   1.98e-45   0.00000648   8-154   2nsf A:1-160  
 
Weak hits:
gi|226359427|ref|YP_002777204.1|   0.0000000504   0.062   6-174   2nsf A:1-160  
gi|226360345|ref|YP_002778123.1|   1.31e-17   0.063   2-125   2nsf A:1-160  
gi|226360704|ref|YP_002778482.1|   1.14e-37   0.088   4-159   2nsf A:1-160  
gi|226362815|ref|YP_002780593.1|   2.75e-34   0.0034   9-156   2nsf A:1-160  
gi|226363409|ref|YP_002781191.1|   0.00000000000733   0.033   141-269   2nsf A:1-160  
gi|226363750|ref|YP_002781532.1|   1.98e-22   0.092   1-138   2nsf A:1-160  
gi|226364559|ref|YP_002782341.1|   2.47e-18   0.061   4-133   2nsf A:1-160  

Corynebacterium efficiens YS-314 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|25029414|ref|NP_739468.1|   4.21e-40   0.000000143   4-159   2nsf A:1-160  

Corynebacterium glutamicum R has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|145297009|ref|YP_001139830.1|   2.06e-42   0.000000044   3-157   2nsf A:1-160  

Microbacterium testaceum StLB037 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|323360054|ref|YP_004226450.1|   1.97e-42   0.0000145   30-183   2nsf A:1-160  

Intrasporangium calvum DSM 43043 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|317126526|ref|YP_004100638.1|   5.68e-39   0.0001   3-154   2nsf A:1-160  
 
Weak hits:
gi|317124760|ref|YP_004098872.1|   0.00000087   0.075   4-114   2nsf A:1-160  
gi|317124804|ref|YP_004098916.1|   2.38e-32   0.0029   11-154   2nsf A:1-160  
gi|317125688|ref|YP_004099800.1|   0.0000000000018   0.072   27-168   2nsf A:1-160  

Cellulomonas flavigena DSM 20109 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|296128150|ref|YP_003635400.1|   7.32e-43   0.0000116   11-160   2nsf A:1-160  
 
Weak hits:
gi|296128469|ref|YP_003635719.1|   6.77e-17   0.031   1-157   2nsf A:1-160  
gi|296129840|ref|YP_003637090.1|   0.00000641   0.037   5-114   2nsf A:1-160  

Arthrobacter phenanthrenivorans Sphe3 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|325965299|ref|YP_004243204.1|   1.65e-44   0.00000629   16-162   2nsf A:1-160  
 
Weak hits:
gi|325962884|ref|YP_004240790.1|   3.66e-29   0.016   2-161   2nsf A:1-160  
gi|325964837|ref|YP_004242743.1|   5.49e-32   0.0012   3-155   2nsf A:1-160  

Arthrobacter aurescens TC1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|119964110|ref|YP_946146.1|   7.32e-45   0.00000909   11-162   2nsf A:1-160  
 
Weak hits:
gi|119952585|ref|YP_950228.1|   0.000000238   0.075   12-73,104-169   2nsf A:1-160  
gi|119964012|ref|YP_947405.1|   1.53e-33   0.0083   2-153   2nsf A:1-160  

Arthrobacter sp. FB24 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|116670597|ref|YP_831530.1|   1.92e-43   0.00000854   9-163   2nsf A:1-160  
 
Weak hits:
gi|116670066|ref|YP_830999.1|   6.78e-35   0.015   4-157   2nsf A:1-160  
gi|116672637|ref|YP_833570.1|   0.0000000549   0.055   6-169   2nsf A:1-160  

Paracoccus denitrificans PD1222 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|119382924|ref|YP_913980.1|   4.27e-34   0.0000635   19-172   2nsf A:1-160  

Streptomyces davawensis JCM 4913 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|471326984|ref|YP_007526014.1|   8.06e-38   0.000043   8-148   2nsf A:1-160  
 
Weak hits:
gi|471323861|ref|YP_007522891.1|   6.87e-31   0.045   3-159   2nsf A:1-160  
gi|471324421|ref|YP_007523451.1|   1.98e-40   0.065   14-168   2nsf A:1-160  
gi|471324445|ref|YP_007523475.1|   0.00000000000000158   0.049   164-328   2nsf A:1-160  
gi|471324584|ref|YP_007523614.1|   0.00000000137   0.038   3-125   2nsf A:1-160  
gi|471325875|ref|YP_007524905.1|   0.000000137   0.043   12-114   2nsf A:1-160  
gi|471325998|ref|YP_007525028.1|   1.77e-38   0.0013   1-146   2nsf A:1-160  
gi|471326123|ref|YP_007525153.1|   0.0000000000366   0.025   80-239   2nsf A:1-160  

Corynebacterium maris DSM 45190 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|529055243|ref|YP_008370832.1|   1.19e-40   0.000000916   10-161   2nsf A:1-160  
 
Weak hits:
gi|529055952|ref|YP_008371541.1|   0.0000000033   0.03   7-118   2nsf A:1-160  

Corynebacterium halotolerans YIM 70093 = DSM 44683 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|451943676|ref|YP_007464312.1|   2.24e-40   0.000000844   7-160   2nsf A:1-160  
 
Weak hits:
gi|451944435|ref|YP_007465071.1|   0.000000311   0.079   4-113   2nsf A:1-160  

Corynebacterium callunae DSM 20147 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|470159927|ref|YP_007531856.1|   1.19e-41   0.000000227   5-155   2nsf A:1-160  

Corynebacterium glutamicum MB001 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|530316890|ref|YP_008402854.1|   2.06e-42   0.000000044   3-157   2nsf A:1-160  

Corynebacterium glutamicum SCgG2 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|511058714|ref|YP_008070684.1|   2.06e-42   0.000000044   3-157   2nsf A:1-160  

Corynebacterium glutamicum SCgG1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|511055476|ref|YP_008067659.1|   2.06e-42   0.000000044   3-157   2nsf A:1-160  

Corynebacterium glutamicum ATCC 13032 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|62391869|ref|YP_227271.1|   2.06e-42   0.000000044   3-157   2nsf A:1-160  

Corynebacterium glutamicum ATCC 13032 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|62391869|ref|YP_227271.1|   2.06e-42   0.000000044   3-157   2nsf A:1-160  

Corynebacterium glutamicum ATCC 13032 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|62391869|ref|YP_227271.1|   2.06e-42   0.000000044   3-157   2nsf A:1-160  

  1  
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Select to display   Genome       Domains   Proteins
No Yes ALL   864 864
No Yes Acidimicrobium ferrooxidans DSM 10331   1 1
No Yes Saccharomonospora viridis DSM 43017   1 1
No Yes Pseudonocardia dioxanivorans CB1190   1 1
No Yes Rhodococcus jostii RHA1   1 1
No Yes Rhodococcus equi 103S   1 1
No Yes Rhodococcus opacus B4   1 1
No Yes Corynebacterium efficiens YS-314   1 1
No Yes Corynebacterium glutamicum R   1 1
No Yes Microbacterium testaceum StLB037   1 1
No Yes Intrasporangium calvum DSM 43043   1 1
No Yes Cellulomonas flavigena DSM 20109   1 1
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Arthrobacter aurescens TC1   1 1
No Yes Arthrobacter sp. FB24   1 1
No Yes Paracoccus denitrificans PD1222   1 1
No Yes Streptomyces davawensis JCM 4913   1 1
No Yes Corynebacterium maris DSM 45190   1 1
No Yes Corynebacterium halotolerans YIM 70093 = DSM 44683   1 1
No Yes Corynebacterium callunae DSM 20147   1 1
No Yes Corynebacterium glutamicum MB001   1 1
No Yes Corynebacterium glutamicum SCgG2   1 1
No Yes Corynebacterium glutamicum SCgG1   1 1
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Corynebacterium glutamicum ATCC 13032   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes NCBI 2017_08 genome   516 516
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   10 10
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   281 281
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes NCBI plasmid sequences (Plasmids)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   2 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   6 6
No Yes TargetDB (Targets)   1 1

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