SUPERFAMILY 1.75 HMM library and genome assignments server

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YheA/YmcA-like superfamily domain assignments
in
Pseudoalteromonas atlantica T6c


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Select to display   Genome       Domains   Proteins
No Yes ALL   70767 70767
No Yes Caenorhabditis brenneri   1 1
No Yes Aspergillus zonatus v1.0   2 2
No Yes Anaerolinea thermophila UNI-1   2 1
No Yes Finegoldia magna ATCC 29328   1 1
No Yes Veillonella parvula DSM 2008   1 1
No Yes Megasphaera elsdenii DSM 20460   1 1
No Yes Acidaminococcus intestini RyC-MR95   2 2
No Yes Acidaminococcus fermentans DSM 20731   1 1
No Yes Natranaerobius thermophilus JW/NM-WN-LF   1 1
No Yes Symbiobacterium thermophilum IAM 14863   2 2
No Yes Clostridium clariflavum DSM 19732   1 1
No Yes Eubacterium siraeum   1 1
No Yes Clostridium cellulolyticum H10   2 2
No Yes Clostridium thermocellum ATCC 27405   1 1
No Yes Ethanoligenens harbinense YUAN-3   1 1
No Yes Faecalibacterium prausnitzii   1 1
No Yes Ruminococcus sp.   1 1
No Yes Ruminococcus bromii   1 1
No Yes Ruminococcus albus 7   1 1
No Yes Candidatus Desulforudis audaxviator MP104C   2 2
No Yes Thermincola potens JR   2 2
No Yes Desulfosporosinus acidiphilus SJ4   4 4
No Yes Desulfosporosinus orientis DSM 765   4 4
No Yes Dehalobacter sp. DCA   1 1
No Yes Dehalobacter sp. CF   1 1
No Yes Syntrophobotulus glycolicus DSM 8271   2 2
No Yes Desulfitobacterium hafniense Y51   3 3
No Yes Desulfitobacterium dehalogenans ATCC 51507   3 3
No Yes Desulfotomaculum reducens MI-1   3 3
No Yes Desulfotomaculum acetoxidans DSM 771   3 3
No Yes Desulfotomaculum kuznetsovii DSM 6115   1 1
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   3 3
No Yes Desulfotomaculum ruminis DSM 2154   3 3
No Yes Acetobacterium woodii DSM 1030   1 1
No Yes Eubacterium eligens ATCC 27750   1 1
No Yes Eubacterium limosum KIST612   1 1
No Yes Coprococcus sp. ART55/1   1 1
No Yes Roseburia intestinalis   1 1
No Yes Syntrophothermus lipocalidus DSM 12680   1 1
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   2 2
No Yes Candidatus Arthromitus sp. SFB-mouse-Japan   1 1
No Yes Clostridium sp. BNL1100   2 2
No Yes Clostridium novyi NT   1 1
No Yes Clostridium ljungdahlii DSM 13528   1 1
No Yes Clostridium tetani E88   1 1
No Yes Mahella australiensis 50-1 BON   1 1
No Yes Thermosediminibacter oceani DSM 16646   1 1
No Yes Caldicellulosiruptor obsidiansis OB47   1 1
No Yes Caldicellulosiruptor kronotskyensis 2002   1 1
No Yes Caldicellulosiruptor hydrothermalis 108   1 1
No Yes Caldicellulosiruptor owensensis OL   1 1
No Yes Caldicellulosiruptor kristjanssonii 177R1B   1 1
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   1 1
No Yes Caldicellulosiruptor bescii DSM 6725   1 1
No Yes Thermoanaerobacterium xylanolyticum LX-11   2 2
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   2 2
No Yes Thermodesulfobium narugense DSM 14796   1 1
No Yes Tepidanaerobacter acetatoxydans Re1   1 1
No Yes Moorella thermoacetica ATCC 39073   1 1
No Yes Ammonifex degensii KC4   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   1 1
No Yes Thermoanaerobacter sp. X514   1 1
No Yes Thermoanaerobacter italicus Ab9   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   1 1
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   1 1
No Yes Acetohalobium arabaticum DSM 5501   1 1
No Yes Halothermothrix orenii H 168   2 2
No Yes Halanaerobium hydrogeniformans   4 4
No Yes Halanaerobium praevalens DSM 2228   4 4
No Yes Carnobacterium sp. 17-4   1 1
No Yes Carnobacterium sp. WN1359   1 1
No Yes Aerococcus urinae ACS-120-V-Col10a   1 1
No Yes Tetragenococcus halophilus NBRC 12172   3 3
No Yes Melissococcus plutonius DAT561   3 3
No Yes Enterococcus sp. 7L76   2 2
No Yes Enterococcus hirae ATCC 9790   3 3
No Yes Enterococcus faecium Aus0004   3 3
No Yes Enterococcus faecalis 62   3 3
No Yes Weissella koreensis KACC 15510   1 1
No Yes Oenococcus oeni PSU-1   1 1
No Yes Leuconostoc sp. C2   1 1
No Yes Leuconostoc kimchii IMSNU 11154   1 1
No Yes Leuconostoc citreum KM20   1 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293   1 1
No Yes Leuconostoc gasicomitatum LMG 18811   1 1
No Yes Lactobacillus casei ATCC 334   1 1
No Yes Lactobacillus kefiranofaciens ZW3   1 1
No Yes Lactobacillus crispatus ST1   1 1
No Yes Lactobacillus rhamnosus Lc 705   1 1
No Yes Lactobacillus johnsonii FI9785   1 1
No Yes Lactobacillus sanfranciscensis TMW 1.1304   1 1
No Yes Lactobacillus ruminis ATCC 27782   1 1
No Yes Lactobacillus fermentum IFO 3956   1 1
No Yes Lactobacillus amylovorus GRL1118   1 1
No Yes Lactobacillus sakei subsp. sakei 23K   1 1
No Yes Lactobacillus reuteri DSM 20016   1 1
No Yes Lactobacillus gasseri ATCC 33323   1 1
No Yes Lactobacillus plantarum JDM1   1 1
No Yes Lactobacillus helveticus DPC 4571   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365   1 1
No Yes Lactobacillus buchneri NRRL B-30929   1 1
No Yes Lactobacillus buchneri   1 1
No Yes Lactobacillus brevis ATCC 367   1 1
No Yes Lactobacillus acidophilus 30SC   1 1
No Yes Pediococcus claussenii ATCC BAA-344   1 1
No Yes Pediococcus pentosaceus ATCC 25745   1 1
No Yes Lactococcus garvieae ATCC 49156   2 2
No Yes Lactococcus lactis subsp. cremoris MG1363   2 2
No Yes Streptococcus sp. I-P16   1 1
No Yes Streptococcus sp. I-G2   1 1
No Yes Streptococcus intermedius JTH08   1 1
No Yes Streptococcus gallolyticus UCN34   3 3
No Yes Streptococcus pseudopneumoniae IS7493   1 1
No Yes Streptococcus pasteurianus ATCC 43144   3 3
No Yes Streptococcus equi subsp. equi 4047   3 3
No Yes Streptococcus dysgalactiae subsp. equisimilis GGS_124   3 3
No Yes Streptococcus infantarius subsp. infantarius CJ18   3 3
No Yes Streptococcus macedonicus ACA-DC 198   3 3
No Yes Streptococcus mitis B6   1 1
No Yes Streptococcus uberis 0140J   3 3
No Yes Streptococcus parauberis KCTC 11537   3 3
No Yes Streptococcus parasanguinis ATCC 15912   1 1
No Yes Streptococcus pyogenes str. Manfredo   2 2
No Yes Streptococcus pneumoniae P1031   1 1
No Yes Streptococcus agalactiae A909   1 1
No Yes Streptococcus mutans NN2025   3 3
No Yes Streptococcus thermophilus LMD-9   3 3
No Yes Streptococcus suis P1/7   1 1
No Yes Streptococcus sanguinis SK36   1 1
No Yes Streptococcus salivarius 57.I   3 3
No Yes Streptococcus oralis Uo5   1 1
No Yes Streptococcus gordonii str. Challis substr. CH1   1 1
No Yes Exiguobacterium sp. MH3   3 3
No Yes Exiguobacterium sp. AT1b   3 3
No Yes Exiguobacterium sibiricum 255-15   3 3
No Yes Kyrpidia tusciae DSM 2912   3 3
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   3 3
No Yes Brevibacillus brevis NBRC 100599   2 2
No Yes Paenibacillus sp. JDR-2   2 2
No Yes Paenibacillus terrae HPL-003   3 3
No Yes Paenibacillus mucilaginosus 3016   2 2
No Yes Paenibacillus polymyxa M1   3 3
No Yes Bacillus selenitireducens MLS10   3 3
No Yes Listeria welshimeri serovar 6b str. SLCC5334   3 3
No Yes Listeria innocua Clip11262   3 3
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   3 3
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   3 3
No Yes Listeria ivanovii subsp. ivanovii PAM 55   3 3
No Yes Solibacillus silvestris StLB046   3 3
No Yes Geobacillus thermoglucosidasius C56-YS93   3 3
No Yes Lysinibacillus sphaericus C3-41   3 3
No Yes Oceanobacillus iheyensis HTE831   3 3
No Yes Anoxybacillus flavithermus WK1   3 3
No Yes Geobacillus thermoleovorans CCB_US3_UF5   3 3
No Yes Geobacillus kaustophilus HTA426   3 3
No Yes Geobacillus sp. GHH01   3 3
No Yes Geobacillus sp. WCH70   3 3
No Yes Geobacillus thermodenitrificans NG80-2   3 3
No Yes Halobacillus halophilus DSM 2266   3 3
No Yes Bacillus sp. JS   3 3
No Yes Bacillus sp. 1NLA3E   3 3
No Yes Bacillus amyloliquefaciens FZB42   3 3
No Yes Bacillus atrophaeus 1942   3 3
No Yes Bacillus subtilis subsp. subtilis str. 168   3 3
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   3 3
No Yes Bacillus halodurans C-125   3 3
No Yes Bacillus weihenstephanensis KBAB4   3 3
No Yes Bacillus thuringiensis str. Al Hakam   3 3
No Yes Bacillus cereus 03BB102   3 3
No Yes Bacillus anthracis str. A0248   3 3
No Yes Bacillus pseudofirmus OF4   3 3
No Yes Bacillus clausii KSM-K16   3 3
No Yes Bacillus cellulosilyticus DSM 2522   3 3
No Yes Bacillus pumilus SAFR-032   3 3
No Yes Bacillus megaterium DSM 319   3 3
No Yes Bacillus coagulans 2-6   3 3
No Yes Macrococcus caseolyticus JCSC5402   3 3
No Yes Staphylococcus pseudintermedius HKU10-03   3 3
No Yes Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305   3 3
No Yes Staphylococcus lugdunensis HKU09-01   3 3
No Yes Staphylococcus haemolyticus JCSC1435   3 3
No Yes Staphylococcus epidermidis RP62A   3 3
No Yes Staphylococcus carnosus subsp. carnosus TM300   3 3
No Yes Staphylococcus aureus subsp. aureus JH1   3 3
No Yes Gemmatimonas aurantiaca T-27   1 1
No Yes Phycisphaera mikurensis NBRC 102666   1 1
No Yes Akkermansia muciniphila ATCC BAA-835   1 1
No Yes Spirochaeta africana DSM 8902   2 2
No Yes Thermovibrio ammonificans HB-1   1 1
No Yes Desulfurobacterium thermolithotrophum DSM 11699   1 1
No Yes halophilic archaeon DL31   1 1
No Yes Methanoplanus petrolearius DSM 11571   2 2
No Yes Ferroglobus placidus DSM 10642   1 1
No Yes Archaeoglobus profundus DSM 5631   1 1
No Yes Archaeoglobus veneficus SNP6   1 1
No Yes Archaeoglobus fulgidus DSM 4304   1 1
No Yes Salinarchaeum sp. Harcht-Bsk1   1 1
No Yes Halorubrum lacusprofundi ATCC 49239   3 3
No Yes Haloquadratum walsbyi DSM 16790   2 2
No Yes Halogeometricum borinquense DSM 11551   1 1
No Yes Haloferax mediterranei ATCC 33500   1 1
No Yes Haloferax volcanii DS2   1 1
No Yes Halomicrobium mukohataei DSM 12286   2 2
No Yes Haloarcula hispanica ATCC 33960   1 1
No Yes Haloarcula marismortui ATCC 43049   1 1
No Yes Halalkalicoccus jeotgali B3   1 1
No Yes Halobacterium salinarum R1   2 2
No Yes Halobacterium sp. NRC-1   1 1
No Yes Aciduliprofundum sp. MAR08-339   1 1
No Yes Aciduliprofundum boonei T469   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Eubacterium siraeum V10Sc8a   1 1
No Yes Clostridium thermocellum DSM 1313   1 1
No Yes Faecalibacterium prausnitzii L2-6   1 1
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Clostridium acidurici 9a   1 1
No Yes Desulfosporosinus meridiei DSM 13257   4 4
No Yes Desulfitobacterium dichloroeliminans LMG P-21439   2 2
No Yes Desulfitobacterium hafniense DCB-2   3 3
No Yes Desulfotomaculum gibsoniae DSM 7213   2 2
No Yes Roseburia intestinalis XB6B4   1 1
No Yes Candidatus Arthromitus sp. SFB-rat-Yit   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Yit   1 1
No Yes Clostridium autoethanogenum DSM 10061   1 1
No Yes Clostridium tetani genome 12124569   1 1
No Yes Clostridium botulinum BKT015925   1 1
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   3 3
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   2 2
No Yes Thermacetogenium phaeum DSM 12270   2 2
No Yes Thermoanaerobacter sp. X513   1 1
No Yes Halobacteroides halobius DSM 5150   1 1
No Yes Carnobacterium maltaromaticum LMA28   3 3
No Yes Melissococcus plutonius ATCC 35311   3 3
No Yes Enterococcus mundtii QU 25   3 3
No Yes Enterococcus casseliflavus EC20   3 3
No Yes Enterococcus faecium Aus0085   3 3
No Yes Enterococcus faecium NRRL B-2354   3 3
No Yes Enterococcus faecium DO   3 3
No Yes Enterococcus faecalis str. Symbioflor 1   3 3
No Yes Enterococcus faecalis D32   3 3
No Yes Enterococcus faecalis OG1RF   3 3
No Yes Enterococcus faecalis V583   3 3
No Yes Leuconostoc carnosum JB16   1 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides J18   1 1
No Yes Leuconostoc gelidum JB7   1 1
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   1 1
No Yes Lactobacillus casei LOCK919   1 1
No Yes Lactobacillus casei W56   1 1
No Yes Lactobacillus casei LC2W   1 1
No Yes Lactobacillus casei BD-II   1 1
No Yes Lactobacillus casei BL23   1 1
No Yes Lactobacillus casei str. Zhang   1 1
No Yes Lactobacillus rhamnosus LOCK908   1 1
No Yes Lactobacillus rhamnosus LOCK900   1 1
No Yes Lactobacillus rhamnosus ATCC 8530   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus johnsonii N6.2   1 1
No Yes Lactobacillus johnsonii DPC 6026   1 1
No Yes Lactobacillus johnsonii NCC 533   1 1
No Yes Lactobacillus salivarius UCC118   1 1
No Yes Lactobacillus fermentum F-6   1 1
No Yes Lactobacillus fermentum CECT 5716   1 1
No Yes Lactobacillus amylovorus GRL 1112   1 1
No Yes Lactobacillus reuteri TD1   1 1
No Yes Lactobacillus reuteri I5007   1 1
No Yes Lactobacillus reuteri JCM 1112   1 1
No Yes Lactobacillus reuteri SD2112   1 1
No Yes Lactobacillus plantarum 16   1 1
No Yes Lactobacillus plantarum ZJ316   1 1
No Yes Lactobacillus plantarum subsp. plantarum ST-III   1 1
No Yes Lactobacillus plantarum subsp. plantarum P-8   1 1
No Yes Lactobacillus plantarum WCFS1   1 1
No Yes Lactobacillus helveticus R0052   1 1
No Yes Lactobacillus helveticus H10   1 1
No Yes Lactobacillus helveticus CNRZ32   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ND02   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus 2038   1 1
No Yes Lactobacillus brevis KB290   1 1
No Yes Lactobacillus acidophilus La-14   1 1
No Yes Lactobacillus acidophilus NCFM   1 1
No Yes Pediococcus pentosaceus SL4   1 1
No Yes Lactococcus garvieae Lg2   2 2
No Yes Lactococcus lactis subsp. lactis KLDS 4.0325   2 2
No Yes Lactococcus lactis subsp. lactis IO-1   2 2
No Yes Lactococcus lactis subsp. lactis CV56   2 2
No Yes Lactococcus lactis subsp. lactis KF147   2 2
No Yes Lactococcus lactis subsp. lactis Il1403   2 2
No Yes Lactococcus lactis subsp. cremoris KW2   2 2
No Yes Lactococcus lactis subsp. cremoris UC509.9   2 2
No Yes Lactococcus lactis subsp. cremoris A76   2 2
No Yes Lactococcus lactis subsp. cremoris NZ9000   2 2
No Yes Lactococcus lactis subsp. cremoris SK11   2 2
No Yes Streptococcus constellatus subsp. pharyngis C1050   1 1
No Yes Streptococcus constellatus subsp. pharyngis C818   1 1
No Yes Streptococcus constellatus subsp. pharyngis C232   1 1
No Yes Streptococcus intermedius B196   1 1
No Yes Streptococcus intermedius C270   1 1
No Yes Streptococcus anginosus C238   1 1
No Yes Streptococcus anginosus C1051   1 1
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069   3 3
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC 43143   3 3
No Yes Streptococcus lutetiensis 033   3 3
No Yes Streptococcus equi subsp. zooepidemicus ATCC 35246   3 3
No Yes Streptococcus equi subsp. zooepidemicus MGCS10565   3 3
No Yes Streptococcus equi subsp. zooepidemicus   3 3
No Yes Streptococcus dysgalactiae subsp. equisimilis 167   3 3
No Yes Streptococcus dysgalactiae subsp. equisimilis AC-2713   3 3
No Yes Streptococcus dysgalactiae subsp. equisimilis ATCC 12394   3 3
No Yes Streptococcus dysgalactiae subsp. equisimilis RE378   3 3
No Yes Streptococcus oligofermentans AS 1.3089   1 1
No Yes Streptococcus iniae SF1   3 3
No Yes Streptococcus parasanguinis FW213   1 1
No Yes Streptococcus pyogenes HSC5   2 2
No Yes Streptococcus pyogenes A20   2 2
No Yes Streptococcus pyogenes MGAS1882   2 2
No Yes Streptococcus pyogenes MGAS15252   2 2
No Yes Streptococcus pyogenes Alab49   2 2
No Yes Streptococcus pyogenes MGAS10750   2 2
No Yes Streptococcus pyogenes MGAS10270   1 1
No Yes Streptococcus pyogenes MGAS2096   1 1
No Yes Streptococcus pyogenes MGAS9429   1 1
No Yes Streptococcus pyogenes MGAS6180   2 2
No Yes Streptococcus pyogenes NZ131   1 1
No Yes Streptococcus pyogenes MGAS8232   2 2
No Yes Streptococcus pyogenes MGAS10394   1 1
No Yes Streptococcus pyogenes MGAS315   2 2
No Yes Streptococcus pyogenes SSI-1   2 2
No Yes Streptococcus pyogenes M1 476   1 1
No Yes Streptococcus pyogenes MGAS5005   2 2
No Yes Streptococcus pyogenes M1 GAS   2 2
No Yes Streptococcus pneumoniae A026   1 1
No Yes Streptococcus pneumoniae ST556   1 1
No Yes Streptococcus pneumoniae SPNA45   1 1
No Yes Streptococcus pneumoniae SPN994039   1 1
No Yes Streptococcus pneumoniae SPN994038   1 1
No Yes Streptococcus pneumoniae SPN034183   1 1
No Yes Streptococcus pneumoniae SPN034156   1 1
No Yes Streptococcus pneumoniae INV104   1 1
No Yes Streptococcus pneumoniae INV200   1 1
No Yes Streptococcus pneumoniae OXC141   1 1
No Yes Streptococcus pneumoniae gamPNI0373   1 1
No Yes Streptococcus pneumoniae AP200   2 2
No Yes Streptococcus pneumoniae ATCC 700669   1 1
No Yes Streptococcus pneumoniae TCH8431/19A   1 1
No Yes Streptococcus pneumoniae CGSP14   1 1
No Yes Streptococcus pneumoniae G54   1 1
No Yes Streptococcus pneumoniae JJA   1 1
No Yes Streptococcus pneumoniae 70585   1 1
No Yes Streptococcus pneumoniae Hungary19A-6   1 1
No Yes Streptococcus pneumoniae Taiwan19F-14   1 1
No Yes Streptococcus pneumoniae D39   1 1
No Yes Streptococcus pneumoniae 670-6B   1 1
No Yes Streptococcus pneumoniae R6   1 1
No Yes Streptococcus pneumoniae TIGR4   1 1
No Yes Streptococcus agalactiae ILRI112   1 1
No Yes Streptococcus agalactiae ILRI005   1 1
No Yes Streptococcus agalactiae 09mas018883   1 1
No Yes Streptococcus agalactiae 2-22   1 1
No Yes Streptococcus agalactiae SA20-06   1 1
No Yes Streptococcus agalactiae GD201008-001   1 1
No Yes Streptococcus agalactiae NEM316   1 1
No Yes Streptococcus agalactiae 2603V/R   1 1
No Yes Streptococcus mutans GS-5   3 3
No Yes Streptococcus mutans LJ23   3 3
No Yes Streptococcus mutans UA159   3 3
No Yes Streptococcus thermophilus MN-ZLW-002   3 3
No Yes Streptococcus thermophilus JIM 8232   3 3
No Yes Streptococcus thermophilus ND03   3 3
No Yes Streptococcus thermophilus CNRZ1066   3 3
No Yes Streptococcus thermophilus LMG 18311   3 3
No Yes Streptococcus suis T15   1 1
No Yes Streptococcus suis TL13   1 1
No Yes Streptococcus suis SC070731   1 1
No Yes Streptococcus suis S735   1 1
No Yes Streptococcus suis ST3   1 1
No Yes Streptococcus suis D9   1 1
No Yes Streptococcus suis SS12   1 1
No Yes Streptococcus suis D12   1 1
No Yes Streptococcus suis ST1   1 1
No Yes Streptococcus suis A7   1 1
No Yes Streptococcus suis JS14   1 1
No Yes Streptococcus suis BM407   1 1
No Yes Streptococcus suis SC84   1 1
No Yes Streptococcus suis GZ1   1 1
No Yes Streptococcus suis 98HAH33   1 1
No Yes Streptococcus suis 05ZYH33   1 1
No Yes Streptococcus salivarius CCHSS3   3 3
No Yes Streptococcus salivarius JIM8777   3 3
No Yes Exiguobacterium antarcticum B7   3 3
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1   3 3
No Yes Thermobacillus composti KWC4   2 2
No Yes Paenibacillus sp. Y412MC10   3 3
No Yes Paenibacillus mucilaginosus KNP414   2 2
No Yes Paenibacillus mucilaginosus K02   2 2
No Yes Paenibacillus larvae subsp. larvae DSM 25430   3 3
No Yes Paenibacillus polymyxa CR1   3 3
No Yes Paenibacillus polymyxa SC2   3 3
No Yes Paenibacillus polymyxa E681   3 3
No Yes Listeria monocytogenes EGD sequence   3 3
No Yes Listeria monocytogenes N53-1   3 3
No Yes Listeria monocytogenes La111   3 3
No Yes Listeria monocytogenes serotype 4b str. LL195   3 3
No Yes Listeria monocytogenes 07PF0776   3 3
No Yes Listeria monocytogenes M7   3 3
No Yes Listeria monocytogenes J1-220   3 3
No Yes Listeria monocytogenes J1816   3 3
No Yes Listeria monocytogenes SLCC2376   3 3
No Yes Listeria monocytogenes SLCC5850   3 3
No Yes Listeria monocytogenes ATCC 19117   3 3
No Yes Listeria monocytogenes L312   3 3
No Yes Listeria monocytogenes SLCC2479   3 3
No Yes Listeria monocytogenes SLCC7179   3 3
No Yes Listeria monocytogenes SLCC2540   3 3
No Yes Listeria monocytogenes SLCC2378   3 3
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   3 3
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   3 3
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   3 3
No Yes Listeria monocytogenes 08-5578   3 3
No Yes Listeria monocytogenes 08-5923   3 3
No Yes Listeria monocytogenes L99   3 3
No Yes Listeria monocytogenes HCC23   3 3
No Yes Listeria monocytogenes 10403S   3 3
No Yes Listeria monocytogenes J0161   3 3
No Yes Listeria monocytogenes Finland 1998   3 3
No Yes Listeria monocytogenes FSL R2-561   3 3
No Yes Listeria monocytogenes serotype 4b str. F2365   3 3
No Yes Listeria monocytogenes EGD-e   3 3
No Yes Geobacillus sp. C56-T3   3 3
No Yes Geobacillus sp. Y4.1MC1   3 3
No Yes Geobacillus sp. Y412MC52   3 3
No Yes Geobacillus sp. Y412MC61   3 3
No Yes Amphibacillus xylanus NBRC 15112   3 3
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   3 3
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   3 3
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   3 3
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   3 3
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   3 3
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   3 3
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   3 3
No Yes Bacillus amyloliquefaciens LFB112   3 3
No Yes Bacillus amyloliquefaciens CC178   3 3
No Yes Bacillus amyloliquefaciens Y2   3 3
No Yes Bacillus amyloliquefaciens IT-45   3 3
No Yes Bacillus amyloliquefaciens XH7   3 3
No Yes Bacillus amyloliquefaciens LL3   3 3
No Yes Bacillus amyloliquefaciens TA208   3 3
No Yes Bacillus amyloliquefaciens DSM 7   3 3
No Yes Bacillus licheniformis 9945A   3 3
No Yes Bacillus subtilis PY79   3 3
No Yes Bacillus subtilis XF-1   3 3
No Yes Bacillus subtilis QB928   3 3
No Yes Bacillus subtilis BSn5   3 3
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   3 3
No Yes Bacillus subtilis subsp. subtilis str. BSP1   3 3
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   3 3
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   3 3
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   3 3
No Yes Bacillus subtilis subsp. spizizenii str. W23   3 3
No Yes Bacillus subtilis subsp. natto BEST195   3 3
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   3 3
No Yes Bacillus infantis NRRL B-14911   4 4
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   3 3
No Yes Bacillus toyonensis BCT-7112   3 3
No Yes Bacillus thuringiensis HD-771   3 3
No Yes Bacillus thuringiensis HD-789   3 3
No Yes Bacillus thuringiensis MC28   3 3
No Yes Bacillus thuringiensis serovar chinensis CT-43   3 3
No Yes Bacillus thuringiensis YBT-1518   3 3
No Yes Bacillus thuringiensis Bt407   3 3
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   3 3
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   3 3
No Yes Bacillus thuringiensis BMB171   3 3
No Yes Bacillus thuringiensis serovar finitimus YBT-020   3 3
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   3 3
No Yes Bacillus cereus FRI-35   3 3
No Yes Bacillus cereus biovar anthracis str. CI   3 3
No Yes Bacillus cereus AH820   3 3
No Yes Bacillus cereus AH187   3 3
No Yes Bacillus cereus B4264   3 3
No Yes Bacillus cereus G9842   3 3
No Yes Bacillus cereus Q1   3 3
No Yes Bacillus cereus F837/76   3 3
No Yes Bacillus cereus NC7401   3 3
No Yes Bacillus cereus E33L   3 3
No Yes Bacillus cereus ATCC 14579   3 3
No Yes Bacillus cereus ATCC 10987   3 3
No Yes Bacillus anthracis str. H9401   3 3
No Yes Bacillus anthracis str. CDC 684   3 3
No Yes Bacillus anthracis str. 'Ames Ancestor'   3 3
No Yes Bacillus anthracis str. Sterne   3 3
No Yes Bacillus anthracis str. Ames   3 3
No Yes Bacillus megaterium WSH-002   3 3
No Yes Bacillus megaterium QM B1551   3 3
No Yes Bacillus coagulans 36D1   3 3
No Yes Staphylococcus aureus subsp. aureus MSHR1132   3 3
No Yes Staphylococcus pseudintermedius ED99   3 3
No Yes Staphylococcus pasteuri SP1   3 3
No Yes Staphylococcus lugdunensis N920143   3 3
No Yes Staphylococcus warneri SG1   3 3
No Yes Staphylococcus epidermidis ATCC 12228   3 3
No Yes Staphylococcus aureus CA-347   3 3
No Yes Staphylococcus aureus Bmb9393   3 3
No Yes Staphylococcus aureus M1   3 3
No Yes Staphylococcus aureus 08BA02176   3 3
No Yes Staphylococcus aureus 04-02981   3 3
No Yes Staphylococcus aureus RF122   3 3
No Yes Staphylococcus aureus subsp. aureus Z172   3 3
No Yes Staphylococcus aureus subsp. aureus 6850   3 3
No Yes Staphylococcus aureus subsp. aureus SA957   3 3
No Yes Staphylococcus aureus subsp. aureus CN1   3 3
No Yes Staphylococcus aureus subsp. aureus SA40   3 3
No Yes Staphylococcus aureus subsp. aureus 11819-97   3 3
No Yes Staphylococcus aureus subsp. aureus M013   3 3
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412   3 3
No Yes Staphylococcus aureus subsp. aureus VC40   3 3
No Yes Staphylococcus aureus subsp. aureus T0131   3 3
No Yes Staphylococcus aureus subsp. aureus LGA251   3 3
No Yes Staphylococcus aureus subsp. aureus ECT-R 2   3 3
No Yes Staphylococcus aureus subsp. aureus JKD6159   3 3
No Yes Staphylococcus aureus subsp. aureus ED133   3 3
No Yes Staphylococcus aureus subsp. aureus ED98   3 3
No Yes Staphylococcus aureus subsp. aureus TW20   3 3
No Yes Staphylococcus aureus subsp. aureus 55/2053   3 3
No Yes Staphylococcus aureus subsp. aureus TCH60   3 3
No Yes Staphylococcus aureus subsp. aureus str. JKD6008   3 3
No Yes Staphylococcus aureus subsp. aureus 71193   3 3
No Yes Staphylococcus aureus subsp. aureus S0385   3 3
No Yes Staphylococcus aureus subsp. aureus str. Newman   2 2
No Yes Staphylococcus aureus subsp. aureus Mu3   3 3
No Yes Staphylococcus aureus subsp. aureus USA300_TCH1516   3 3
No Yes Staphylococcus aureus subsp. aureus USA300_FPR3757   3 3
No Yes Staphylococcus aureus subsp. aureus JH9   3 3
No Yes Staphylococcus aureus subsp. aureus MSSA476   3 3
No Yes Staphylococcus aureus subsp. aureus MRSA252   3 3
No Yes Staphylococcus aureus subsp. aureus MW2   3 3
No Yes Staphylococcus aureus subsp. aureus N315   3 3
No Yes Staphylococcus aureus subsp. aureus Mu50   3 3
No Yes Staphylococcus aureus subsp. aureus COL   3 3
No Yes Staphylococcus aureus subsp. aureus NCTC 8325   3 3
No Yes Octadecabacter arcticus 238   1 1
No Yes Archaeoglobus sulfaticallidus PM70-1   1 1
No Yes Haloquadratum walsbyi C23   1 1
No Yes Natronomonas moolapensis 8.8.11   2 2
No Yes Haloarcula hispanica N601   1 1
No Yes 2_050719S (meta-genome)   1 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Combined (meta-genome)   1 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   4 4
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   4 4
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   5 5
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   4 4
No Yes Human Gut Community Subject 7 (meta-genome)   3 3
No Yes Human Gut Community Subject 8 (meta-genome)   4 4
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   4 4
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   2 2
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   4 4
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   3 3
No Yes Mouse Gut Community lean1 (meta-genome)   1 1
No Yes Mouse Gut Community ob2 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   61212 61211
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   4 4
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   2 2
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   2 2
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   4 4
No Yes STRING v9.0.5 (STRING)   342 342
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   7543 7542
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   4 4
No Yes Global Ocean Sampling Expedition (GOS)   5 5
No Yes NCBI plasmid sequences (Plasmids)   4 4
No Yes NCBI viral sequences (Viral)   4 4
No Yes PDB chains (SCOP 1.75) (PDB)   4 4
No Yes Protein Data Bank (all PDB sequenc)   12 12
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   36 36
No Yes TargetDB (Targets)   47 47

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