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AGR C 984p-like superfamily domain assignments
in
all bacterial genomes

Assignment details

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25 selected genomes have 35 significant domains in 28 proteins.

Showing genomes 1 to 25 of 106
  1 2 3 4 5   Next Last

Hyphomonas neptunium ATCC 15444 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|114800299|ref|YP_758998.1|   2.35e-54   9-243   AGR C 984p-like  

Dinoroseobacter shibae DFL 12 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|159045898|ref|YP_001534692.1|   4.18e-68   9-246   AGR C 984p-like  

Phaeobacter gallaeciensis 2.10 has 5 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|400755026|ref|YP_006563394.1|   5.1e-37   10-124   AGR C 984p-like  
  7.59e-35   381-574   AGR C 984p-like  
  1.44e-19   129-211   AGR C 984p-like  
  0.00000000000745   224-286   AGR C 984p-like  
  0.0000000000157   289-358   AGR C 984p-like  

Pseudovibrio sp. FO-BEG1 has 2 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|374330534|ref|YP_005080718.1|   5.75e-50   2-208   AGR C 984p-like  
  6.54e-34   214-323   AGR C 984p-like  

Jannaschia sp. CCS1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|89056691|ref|YP_512142.1|   1.06e-68   9-244   AGR C 984p-like  

Ruegeria sp. TM1040 has 2 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|99082811|ref|YP_614965.1|   4.71e-52   9-165,209-267   AGR C 984p-like  
  1.83e-16   511-633   AGR C 984p-like  
  0.00157   422-503   AGR C 984p-like  
  0.0068   252-364   AGR C 984p-like  

Ruegeria pomeroyi DSS-3 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|56698279|ref|YP_168652.1|   7.59e-72   10-246   AGR C 984p-like  

Ketogulonicigenium vulgare Y25 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|310816824|ref|YP_003964788.1|   1.03e-68   8-246   AGR C 984p-like  

Ketogulonigenium vulgarum WSH-001 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|385234421|ref|YP_005795763.1|   1.03e-68   8-246   AGR C 984p-like  

Roseobacter litoralis Och 149 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|339505799|ref|YP_004693219.1|   8.24e-73   8-245   AGR C 984p-like  

Rhodobacter sphaeroides ATCC 17029 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|126464886|ref|YP_001041862.1|   8.63e-68   9-245   AGR C 984p-like  

Rhodobacter capsulatus SB 1003 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|294679038|ref|YP_003579653.1|   3.14e-67   9-246   AGR C 984p-like  

Paracoccus denitrificans PD1222 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|119384357|ref|YP_915413.1|   2.62e-58   10-244   AGR C 984p-like  

Rhodospirillum centenum SW has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|209963548|ref|YP_002296463.1|   1.7e-62   249-466   AGR C 984p-like  
  3.27e-58   17-238   AGR C 984p-like  
gi|209967005|ref|YP_002299920.1|   5.36e-62   6-222   AGR C 984p-like  

Azospirillum lipoferum 4B has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|374294101|ref|YP_005041126.1|   1.02e-73   1-223   AGR C 984p-like  

Azospirillum sp. B510 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|288962700|ref|YP_003452994.1|   4.71e-73   1-223   AGR C 984p-like  

Azospirillum brasilense Sp245 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|392379771|ref|YP_004986929.1|   7.59e-71   1-223   AGR C 984p-like  

Gluconacetobacter diazotrophicus PAl 5 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|162147451|ref|YP_001601912.1|   6.54e-51   21-238   AGR C 984p-like  

Acidiphilium multivorum AIU301 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|326402279|ref|YP_004282360.1|   4.84e-53   59-281   AGR C 984p-like  

Acidiphilium cryptum JF-5 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|148259125|ref|YP_001233252.1|   4.18e-53   46-268   AGR C 984p-like  

Gluconobacter oxydans 621H has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|58038542|ref|YP_190506.1|   1.57e-50   8-229   AGR C 984p-like  

Polymorphum gilvum SL003B-26A1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|328545468|ref|YP_004305577.1|   3.14e-85   1-223   AGR C 984p-like  

Azorhizobium caulinodans ORS 571 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|158422870|ref|YP_001524162.1|   1.06e-76   45-267   AGR C 984p-like  
gi|158422871|ref|YP_001524163.1|   9.29e-75   36-259   AGR C 984p-like  
gi|158424043|ref|YP_001525335.1|   4.05e-74   73-293   AGR C 984p-like  

Methylobacterium chloromethanicum CM4 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|218528724|ref|YP_002419540.1|   4.58e-74   1-117,276-385   AGR C 984p-like  

Methylobacterium extorquens AM1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|240137254|ref|YP_002961723.1|   3.79e-74   1-117,276-385   AGR C 984p-like  

  1 2 3 4 5   Next Last
Showing genomes 1 to 25 of 106

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Select to display   Genome       Domains   Proteins
No Yes ALL   10480 10480
No Yes Hyphomonas neptunium ATCC 15444   1 1
No Yes Dinoroseobacter shibae DFL 12   1 1
No Yes Phaeobacter gallaeciensis 2.10   5 1
No Yes Pseudovibrio sp. FO-BEG1   2 1
No Yes Jannaschia sp. CCS1   1 1
No Yes Ruegeria sp. TM1040   2 1
No Yes Ruegeria pomeroyi DSS-3   1 1
No Yes Ketogulonicigenium vulgare Y25   1 1
No Yes Ketogulonigenium vulgarum WSH-001   1 1
No Yes Roseobacter litoralis Och 149   1 1
No Yes Rhodobacter sphaeroides ATCC 17029   1 1
No Yes Rhodobacter capsulatus SB 1003   1 1
No Yes Paracoccus denitrificans PD1222   1 1
No Yes Rhodospirillum centenum SW   3 2
No Yes Azospirillum lipoferum 4B   1 1
No Yes Azospirillum sp. B510   1 1
No Yes Azospirillum brasilense Sp245   1 1
No Yes Gluconacetobacter diazotrophicus PAl 5   1 1
No Yes Acidiphilium multivorum AIU301   1 1
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Gluconobacter oxydans 621H   1 1
No Yes Polymorphum gilvum SL003B-26A1   1 1
No Yes Azorhizobium caulinodans ORS 571   3 3
No Yes Methylobacterium chloromethanicum CM4   1 1
No Yes Methylobacterium extorquens AM1   1 1
No Yes Methylobacterium sp. 4-46   2 2
No Yes Methylobacterium populi BJ001   1 1
No Yes Methylobacterium radiotolerans JCM 2831   3 1
No Yes Ochrobactrum anthropi ATCC 49188   1 1
No Yes Brucella microti CCM 4915   1 1
No Yes Brucella pinnipedialis B2/94   1 1
No Yes Brucella canis ATCC 23365   1 1
No Yes Brucella suis ATCC 23445   1 1
No Yes Brucella melitensis ATCC 23457   1 1
No Yes Brucella ovis ATCC 25840   1 1
No Yes Brucella abortus S19   1 1
No Yes Sinorhizobium fredii NGR234   6 2
No Yes Sinorhizobium medicae WSM419   6 2
No Yes Sinorhizobium meliloti AK83   6 2
No Yes Genome sequence of Rhizobium sp. strain IRBG74   11 3
No Yes Rhizobium etli CIAT 652   9 2
No Yes Rhizobium leguminosarum bv. viciae 3841   12 2
No Yes Agrobacterium tumefaciens str. C58   11 3
No Yes Agrobacterium radiobacter K84   6 1
No Yes Agrobacterium sp. H13-3   11 3
No Yes Agrobacterium vitis S4   5 1
No Yes Candidatus Liberibacter asiaticus str. psy62   4 1
No Yes Mesorhizobium sp. BNC1   1 1
No Yes Mesorhizobium opportunistum WSM2075   2 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   4 1
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Methylocella silvestris BL2   1 1
No Yes Beijerinckia indica subsp. indica ATCC 9039   1 1
No Yes Rhodomicrobium vannielii ATCC 17100   1 1
No Yes Hyphomicrobium sp. MC1   5 1
No Yes Hyphomicrobium denitrificans ATCC 51888   5 1
No Yes Rhodopseudomonas palustris BisA53   6 2
No Yes Bradyrhizobium japonicum USDA 110   5 2
No Yes Bartonella clarridgeiae 73   1 1
No Yes Bartonella bacilliformis KC583   1 1
No Yes Phaeobacter gallaeciensis DSM 17395   5 1
No Yes Phaeobacter gallaeciensis DSM 26640   5 1
No Yes Leisingera methylohalidivorans DSM 14336   5 1
No Yes Rhodobacter sphaeroides KD131   1 1
No Yes Rhodobacter sphaeroides 2.4.1   1 1
No Yes Paracoccus aminophilus JCM 7686   1 1
No Yes Gluconacetobacter diazotrophicus PAl 5   1 1
No Yes Gluconobacter oxydans H24   1 1
No Yes Methylobacterium extorquens DM4   1 1
No Yes Methylobacterium extorquens PA1   1 1
No Yes Brucella ceti TE10759-12   1 1
No Yes Brucella ceti TE28753-12   1 1
No Yes Brucella canis HSK A52141   1 1
No Yes Brucella suis VBI22   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella melitensis NI   1 1
No Yes Brucella melitensis M5-90   1 1
No Yes Brucella melitensis M28   1 1
No Yes Brucella melitensis bv. 1 str. 16M   1 1
No Yes Brucella abortus A13334   1 1
No Yes Brucella melitensis biovar Abortus 2308   1 1
No Yes Brucella abortus bv. 1 str. 9-941   1 1
No Yes Sinorhizobium fredii USDA 257   6 2
No Yes Sinorhizobium fredii HH103   6 2
No Yes Sinorhizobium meliloti 2011   6 2
No Yes Sinorhizobium meliloti GR4   6 2
No Yes Sinorhizobium meliloti Rm41   6 2
No Yes Sinorhizobium meliloti SM11   6 2
No Yes Sinorhizobium meliloti BL225C   6 2
No Yes Sinorhizobium meliloti 1021   6 2
No Yes Rhizobium etli CFN 42   13 2
No Yes Rhizobium etli bv. mimosae str. Mim1   8 1
No Yes Rhizobium tropici CIAT 899   11 2
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   12 2
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   13 2
No Yes Liberibacter crescens BT-1   5 1
No Yes Candidatus Liberibacter solanacearum CLso-ZC1   5 1
No Yes Candidatus Liberibacter americanus str. Sao Paulo   4 1
No Yes Candidatus Liberibacter asiaticus str. gxpsy   4 1
No Yes Mesorhizobium australicum WSM2073   4 1
No Yes Hyphomicrobium nitrativorans NL23   6 2
No Yes Hyphomicrobium denitrificans 1NES1   5 1
No Yes Rhodopseudomonas palustris BisB18   5 1
No Yes Bradyrhizobium sp. S23321   5 2
No Yes Bradyrhizobium japonicum USDA 6   5 2
No Yes Ricinus communis (Early assembly) Castor bean 2 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   2 2
No Yes Dump bottom (Dump bottom) (meta-genome)   8 7
No Yes Dump top (Dump top) (meta-genome)   12 12
No Yes Endophytic microbiome from Rice (meta-genome)   4 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   4 4
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   1 1
No Yes NCBI 2017_08 genome   6167 2544
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   2 2
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   5 4
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   4 4
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   7 6
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   164 68
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   3472 1422
No Yes Global Ocean Sampling Expedition (GOS)   19 17
No Yes NCBI plasmid sequences (Plasmids)   35 15
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   2 2
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   8 8
No Yes TargetDB (Targets)   11 3

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