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YxiM N-terminal domain-like family domain assignments
in
all bacterial and archaeal genomes

Assignment details

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25 selected genomes have 26 significant domains in 26 proteins.

Showing genomes 1 to 25 of 28
  1 2   Next Last

Arthrobacter chlorophenolicus A6 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|220914109|ref|YP_002489418.1|   1.79e-37   0.00000284   48-189   2o14 A:14-159  

Clostridium clariflavum DSM 19732 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|374297560|ref|YP_005047751.1|   5.78e-39   0.000001   33-175   2o14 A:14-159  

Clostridium thermocellum ATCC 27405 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|125975619|ref|YP_001039529.1|   2.38e-40   0.00000122   34-177   2o14 A:14-159  

Ruminococcus albus 7 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|317055207|ref|YP_004103674.1|   4.25e-30   0.0000347   41-179   2o14 A:14-159  
gi|317057182|ref|YP_004105649.1|   1.11e-28   0.0000201   46-179   2o14 A:14-159  

Paenibacillus terrae HPL-003 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|374323790|ref|YP_005076919.1|   1.45e-35   0.00000162   35-176   2o14 A:14-159  
 
Weak hits:
gi|374322171|ref|YP_005075300.1|   5.1e-25   0.0018   1-146   2o14 A:14-159  
gi|374322895|ref|YP_005076024.1|   1.28e-27   0.0015   31-167   2o14 A:14-159  

Paenibacillus mucilaginosus 3016 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|379722478|ref|YP_005314609.1|   7.23e-36   0.00000155   34-174   2o14 A:14-159  
 
Weak hits:
gi|379719250|ref|YP_005311381.1|   6.29e-28   0.00073   182-321   2o14 A:14-159  
  3.83e-27   0.0018   49-181   2o14 A:14-159  
gi|379720195|ref|YP_005312326.1|   4.85e-27   0.0029   3-140   2o14 A:14-159  
gi|379720230|ref|YP_005312361.1|   1.36e-24   0.0039   2-127   2o14 A:14-159  
gi|379721836|ref|YP_005313967.1|   0.0000349   0.051   47-178   2o14 A:14-159  
gi|379722384|ref|YP_005314515.1|   0.0000000000391   0.025   1104-1223   2o14 A:14-159  
gi|379722731|ref|YP_005314862.1|   6.21e-33   0.0017   4-142   2o14 A:14-159  

Paenibacillus polymyxa M1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386040860|ref|YP_005959814.1|   2.55e-37   0.00000176   34-175   2o14 A:14-159  
 
Weak hits:
gi|386039446|ref|YP_005958400.1|   2.55e-26   0.0018   1-144   2o14 A:14-159  
gi|386040002|ref|YP_005958956.1|   1.45e-26   0.0019   31-167   2o14 A:14-159  

Bacillus sp. JS has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386760603|ref|YP_006233820.1|   2.21e-40   0.000000194   30-173   2o14 A:14-159  

Bacillus atrophaeus 1942 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|311070443|ref|YP_003975366.1|   2.13e-39   0.000000247   30-173   2o14 A:14-159  

Bacillus subtilis subsp. subtilis str. 168 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|255767829|ref|NP_391791.2|   1.19e-40   0.000000148   30-173   2o14 A:14-159  

Clostridium thermocellum DSM 1313 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|385778058|ref|YP_005687223.1|   3.97e-39   0.00000118   34-177   2o14 A:14-159  

Ruminococcus champanellensis 18P13 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|479200969|ref|YP_007829987.1|   3.4e-36   0.00000506   40-181   2o14 A:14-159  
 
Weak hits:
gi|479200193|ref|YP_007829211.1|   0.000000000000368   0.039   867-1006   2o14 A:14-159  

Paenibacillus mucilaginosus KNP414 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|337749565|ref|YP_004643727.1|   6.63e-36   0.00000144   35-176   2o14 A:14-159  
 
Weak hits:
gi|337746257|ref|YP_004640419.1|   1.53e-27   0.0023   3-140   2o14 A:14-159  
gi|337746300|ref|YP_004640462.1|   2.38e-25   0.0025   6-142   2o14 A:14-159  
gi|337747679|ref|YP_004641841.1|   2.64e-27   0.00078   182-321   2o14 A:14-159  
  3.83e-27   0.0018   49-181   2o14 A:14-159  
gi|337748860|ref|YP_004643022.1|   0.000017   0.051   47-178   2o14 A:14-159  
gi|337749054|ref|YP_004643216.1|   0.00000000213   0.0063   439-618   2o14 A:14-159  
gi|337749458|ref|YP_004643620.1|   0.0000000000391   0.025   1104-1223   2o14 A:14-159  
gi|337749589|ref|YP_004643751.1|   2.3e-23   0.0011   1293-1432   2o14 A:14-159  
  0.000000000000145   0.0027   628-755   2o14 A:14-159  
gi|337749868|ref|YP_004644030.1|   4e-33   0.0016   4-142   2o14 A:14-159  

Paenibacillus mucilaginosus K02 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|511629315|ref|YP_006191565.2|   1.11e-35   0.00000144   34-175   2o14 A:14-159  
 
Weak hits:
gi|386721846|ref|YP_006188171.1|   2.89e-28   0.00073   182-321   2o14 A:14-159  
  8.5e-26   0.0017   49-181   2o14 A:14-159  
gi|386722788|ref|YP_006189114.1|   2.55e-27   0.0023   2-138   2o14 A:14-159  
gi|386722824|ref|YP_006189150.1|   1.36e-24   0.0039   2-127   2o14 A:14-159  
gi|386724756|ref|YP_006191082.1|   0.00000000349   0.0074   438-617   2o14 A:14-159  
gi|386725140|ref|YP_006191466.1|   0.0000000000391   0.025   1104-1223   2o14 A:14-159  
gi|386725504|ref|YP_006191830.1|   2.3e-31   0.0021   4-142   2o14 A:14-159  
gi|511629873|ref|YP_006190905.2|   0.0000357   0.051   60-191   2o14 A:14-159  

Paenibacillus polymyxa CR1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|565992125|ref|YP_008911809.1|   2.81e-37   0.00000181   34-175   2o14 A:14-159  
 
Weak hits:
gi|565990651|ref|YP_008910228.1|   5.78e-29   0.0012   1-146   2o14 A:14-159  
gi|565991342|ref|YP_008910992.1|   1.19e-26   0.0018   31-167   2o14 A:14-159  

Paenibacillus polymyxa SC2 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|310641865|ref|YP_003946623.1|   2.55e-37   0.00000176   34-175   2o14 A:14-159  
 
Weak hits:
gi|310640284|ref|YP_003945042.1|   2.55e-26   0.0018   1-144   2o14 A:14-159  
gi|310640902|ref|YP_003945660.1|   1.45e-26   0.0019   31-167   2o14 A:14-159  

Paenibacillus polymyxa E681 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|308068931|ref|YP_003870536.1|   2.81e-37   0.00000181   34-175   2o14 A:14-159  
 
Weak hits:
gi|308067513|ref|YP_003869118.1|   1.96e-26   0.0013   1-145   2o14 A:14-159  
gi|308068111|ref|YP_003869716.1|   2.21e-26   0.0015   31-167   2o14 A:14-159  

Bacillus subtilis PY79 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|560130952|ref|YP_008832093.1|   1.19e-40   0.000000148   30-173   2o14 A:14-159  

Bacillus subtilis XF-1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|449096375|ref|YP_007428866.1|   4.51e-40   0.000000178   30-173   2o14 A:14-159  

Bacillus subtilis QB928 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|402778076|ref|YP_006632020.1|   1.19e-40   0.000000148   31-174   2o14 A:14-159  

Bacillus subtilis BSn5 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|321313477|ref|YP_004205764.1|   4.51e-40   0.000000178   30-173   2o14 A:14-159  

Bacillus subtilis subsp. subtilis str. BAB-1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|472332306|ref|YP_007664582.1|   4.51e-40   0.000000178   30-173   2o14 A:14-159  

Bacillus subtilis subsp. subtilis str. BSP1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|430757510|ref|YP_007207570.1|   1.53e-40   0.000000155   30-173   2o14 A:14-159  

Bacillus subtilis subsp. subtilis str. RO-NN-1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|384177570|ref|YP_005558955.1|   8.5e-40   0.000000185   30-173   2o14 A:14-159  

Bacillus subtilis subsp. subtilis 6051-HGW has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|470164134|ref|YP_007535909.1|   1.19e-40   0.000000148   30-173   2o14 A:14-159  

  1 2   Next Last
Showing genomes 1 to 25 of 28

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Select to display   Genome       Domains   Proteins
No Yes ALL   525 525
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Clostridium clariflavum DSM 19732   1 1
No Yes Clostridium thermocellum ATCC 27405   1 1
No Yes Ruminococcus albus 7   2 2
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Paenibacillus mucilaginosus 3016   1 1
No Yes Paenibacillus polymyxa M1   1 1
No Yes Bacillus sp. JS   1 1
No Yes Bacillus atrophaeus 1942   1 1
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Clostridium thermocellum DSM 1313   1 1
No Yes Ruminococcus champanellensis 18P13   1 1
No Yes Paenibacillus mucilaginosus KNP414   1 1
No Yes Paenibacillus mucilaginosus K02   1 1
No Yes Paenibacillus polymyxa CR1   1 1
No Yes Paenibacillus polymyxa SC2   1 1
No Yes Paenibacillus polymyxa E681   1 1
No Yes Bacillus subtilis PY79   1 1
No Yes Bacillus subtilis XF-1   1 1
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis BSn5   1 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   1 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   1 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   1 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   1 1
No Yes Bacillus subtilis subsp. natto BEST195   1 1
No Yes NCBI 2017_08 genome   342 342
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   3 3
No Yes Uniprot 2018_03 genome   132 132
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   1 1
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   3 3
No Yes TargetDB (Targets)   2 2

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