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Mib/herc2 domain-like superfamily domain assignments
in
all eukaryotic genomes

Assignment details

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25 selected genomes have 140 significant domains in 97 proteins.

Showing genomes 151 to 175 of 228
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Phytophthora ramorum 1.1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Phyra1_1|94524|C_scaffold_18000066   1.16e-17   482-549   Mib/herc2 domain  

Phytophthora sojae 1.1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Physo1_1|157725|C_scaffold_58000019   9.81e-18   466-533   Mib/herc2 domain  

Phytophthora infestans T30-4 has 4 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
PITG_01450   2.09e-17   3444-3512   Mib/herc2 domain  
PITG_03860   0.000000000000314   3824-3894   Mib/herc2 domain  
  0.0000000275   1984-2054   Mib/herc2 domain  
PITG_20204   2.48e-18   580-650   Mib/herc2 domain  

Phytophthora capsici has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|PhycaF7|123|gw1.5594.1.1   6.8e-18   511-578   Mib/herc2 domain  

Hyaloperonospora arabidopsidis 22 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
HpaP814299   2.09e-17   2004-2071   Mib/herc2 domain  

Fragilariopsis cylindrus has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Fracy1|232954|fgenesh2_pg.1_#_1152   0.000000222   331-402   Mib/herc2 domain  
 
Weak hits:
jgi|Fracy1|246323|fgenesh2_pg.17_#_268   0.0144   300-324   Mib/herc2 domain  
jgi|Fracy1|256991|fgenesh2_pg.84_#_16   0.0183   347-371   Mib/herc2 domain  

Symbiodinium minutum clade B1 v1.2 has 10 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
symbB.v1.2.016321.t1|scaffold1240.1|size129799|4   0.00000183   884-943   Mib/herc2 domain  
symbB.v1.2.016322.t1|scaffold1240.1|size129799|5   0.0000157   204-243   Mib/herc2 domain  
symbB.v1.2.025678.t1|scaffold2496.1|size77716|4   0.00000000000000863   406-465   Mib/herc2 domain  
symbB.v1.2.028588.t1|scaffold3043.1|size64820|1   0.00000902   76-152   Mib/herc2 domain  
symbB.v1.2.031474.t1|scaffold3658.1|size52500|5   2.48e-16   342-405   Mib/herc2 domain  
  9.15e-16   40-102   Mib/herc2 domain  
  0.00000000000000301   207-269   Mib/herc2 domain  
  0.000000000000085   271-335   Mib/herc2 domain  
  0.000000000144   108-179   Mib/herc2 domain  
symbB.v1.2.033308.t1|scaffold4119.1|size46439|3   0.00000000000122   151-209   Mib/herc2 domain  
 
Weak hits:
symbB.v1.2.003812.t1|scaffold192.1|size616647|23   0.00222   432-457   Mib/herc2 domain  
symbB.v1.2.025200.t1|scaffold2427.1|size79403|2   0.0523   164-202   Mib/herc2 domain  
symbB.v1.2.034577.t1|scaffold4490.1|size41704|2   0.0183   206-251   Mib/herc2 domain  

Guillardia theta CCMP2712 v1.0 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Guith1|135652|fgenesh2_pg.16_#_140   0.0000000000000124   1173-1238   Mib/herc2 domain  
jgi|Guith1|141283|fgenesh2_pg.53_#_44   0.0000017   32-69,102-121   Mib/herc2 domain  
jgi|Guith1|142744|fgenesh2_pg.67_#_27   0.0000000798   158-203   Mib/herc2 domain  
jgi|Guith1|156131|fgenesh2_kg.190_#_3_#_4384_1_CCFI_CCFN_EXTA_EXTB   0.0000327   7-56   Mib/herc2 domain  
 
Weak hits:
jgi|Guith1|103943|au.15_g5045   0.0183   238-284   Mib/herc2 domain  
jgi|Guith1|104647|au.17_g5749   0.00144   121-164   Mib/herc2 domain  
jgi|Guith1|110330|au.44_g11432   0.0196   39-68   Mib/herc2 domain  
jgi|Guith1|111726|au.54_g12828   0.0262   20-61   Mib/herc2 domain  
jgi|Guith1|114618|au.77_g15720   0.000942   777-822   Mib/herc2 domain  
jgi|Guith1|120195|au.173_g21297   0.00301   1115-1141   Mib/herc2 domain  
jgi|Guith1|122867|au.513_g23969   0.0011   312-360   Mib/herc2 domain  
jgi|Guith1|132127|fgenesh2_pg.3_#_97   0.0103   235-278   Mib/herc2 domain  
jgi|Guith1|152980|fgenesh2_kg.40_#_24_#_2279_1_CCFI_CCFN_EXTA_EXTB   0.0129   40-97   Mib/herc2 domain  
jgi|Guith1|165960|estExt_fgenesh2_pg.C_1250032   0.0288   83-140   Mib/herc2 domain  
jgi|Guith1|85125|estExt_Genewise1Plus.C_120155   0.000314   365-402   Mib/herc2 domain  
jgi|Guith1|99004|au.1_g106   0.0235   48-82   Mib/herc2 domain  

Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) has 11 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|170284530|gb|AAI61083|   8.76e-23   6-79   Mib/herc2 domain  
  1.03e-22   151-226   Mib/herc2 domain  
gi|183986655|ref|NP_001116916|   8.76e-23   6-79   Mib/herc2 domain  
  1.03e-22   151-226   Mib/herc2 domain  
gi|189442230|gb|AAI67461|   3.14e-23   145-220   Mib/herc2 domain  
  1.57e-19   11-73   Mib/herc2 domain  
gi|194018642|ref|NP_001123407|   3.14e-23   145-220   Mib/herc2 domain  
  1.57e-19   11-73   Mib/herc2 domain  
gi|197246313|gb|AAI68474|   0.000000000196   1291-1332   Mib/herc2 domain  
gi|212549599|ref|NP_001131085|   0.000000000196   1291-1332   Mib/herc2 domain  
gi|301615126|gb|XP_002937025|   1.7e-21   1864-1931   Mib/herc2 domain  

Drosophila melanogaster FlyBase 5.12 (FlyBase) has 6 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
FBpp0075275   2.22e-22   239-314   Mib/herc2 domain  
  2.48e-19   107-167   Mib/herc2 domain  
FBpp0079663   3.79e-19   1326-1390   Mib/herc2 domain  
FBpp0080686   5.36e-22   3-75   Mib/herc2 domain  
  4.71e-21   147-221   Mib/herc2 domain  
FBpp0290558   1.7e-19   1922-1989   Mib/herc2 domain  

Anopheles gambiae VectorBase AgamP3.6 (VectorBase) has 6 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
AGAP008851-PA|hypothetical   8.11e-23   146-221   Mib/herc2 domain  
  2.35e-20   3-74   Mib/herc2 domain  
AGAP009511-PA|hypothetical   1.19e-21   1379-1443   Mib/herc2 domain  
AGAP011823-PA|hypothetical   5.62e-19   1945-2011   Mib/herc2 domain  
AGAP011932-PA|hypothetical   1.7e-22   168-243   Mib/herc2 domain  
  2.35e-19   34-96   Mib/herc2 domain  
 
Weak hits:
AGAP002630-PA|hypothetical   0.051   30-82   Mib/herc2 domain  

Ascaris suum Victoria/Ghent has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
GS_07847   3.4e-18   1621-1683   Mib/herc2 domain  

Caenorhabditis elegans WormBase WS218 (WormBase) has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
C34D4.14   1.28e-18   1488-1545   Mib/herc2 domain  

Homo sapiens 75_37 (old version GRC) has 37 significant domains in 23 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSP00000261537   3.14e-23   145-220   Mib/herc2 domain  
  6.67e-20   11-73   Mib/herc2 domain  
ENSP00000261609   2.62e-21   1863-1929   Mib/herc2 domain  
ENSP00000348081   3.92e-22   107-180   Mib/herc2 domain  
  4.45e-22   252-326   Mib/herc2 domain  
ENSP00000349741   3.79e-22   64-137   Mib/herc2 domain  
  4.18e-22   209-283   Mib/herc2 domain  
ENSP00000353713   3.53e-22   64-137   Mib/herc2 domain  
  4.05e-22   209-283   Mib/herc2 domain  
ENSP00000367980   3.27e-22   6-79   Mib/herc2 domain  
  3.66e-22   151-225   Mib/herc2 domain  
ENSP00000367982   3.53e-22   64-137   Mib/herc2 domain  
  4.05e-22   209-283   Mib/herc2 domain  
ENSP00000367984   2.48e-22   6-79   Mib/herc2 domain  
  0.0000000109   151-178,226-256   Mib/herc2 domain  
ENSP00000382269   2.22e-22   1268-1336   Mib/herc2 domain  
ENSP00000423221   5.75e-24   5-77   Mib/herc2 domain  
ENSP00000424615   2.88e-22   20-93   Mib/herc2 domain  
  3.14e-22   165-239   Mib/herc2 domain  
ENSP00000425032   9.55e-23   6-79   Mib/herc2 domain  
  1.07e-22   151-225   Mib/herc2 domain  
ENSP00000426103   4.05e-22   121-194   Mib/herc2 domain  
  4.45e-22   266-340   Mib/herc2 domain  
ENSP00000426128   3.53e-22   20-93   Mib/herc2 domain  
  3.92e-22   165-239   Mib/herc2 domain  
ENSP00000426603   1.24e-23   6-79   Mib/herc2 domain  
ENSP00000426865   1.96e-23   6-79   Mib/herc2 domain  
  0.00000115   151-175   Mib/herc2 domain  
ENSP00000427680   3.27e-22   60-134   Mib/herc2 domain  
ENSP00000428264   3.66e-22   121-194   Mib/herc2 domain  
  0.0000000196   266-293,341-371   Mib/herc2 domain  
ENSP00000428660   4.05e-22   121-194   Mib/herc2 domain  
  4.45e-22   266-340   Mib/herc2 domain  
ENSP00000450697   2.22e-22   1268-1336   Mib/herc2 domain  
ENSP00000451860   0.0000000000248   742-792   Mib/herc2 domain  
ENSP00000452233   0.00000000000811   99-138   Mib/herc2 domain  
ENSP00000458767   2.62e-21   1863-1929   Mib/herc2 domain  

Homo sapiens (NCBI version) has 14 significant domains in 8 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|118498337|ref|NP_056197.2|   2.22e-22   1268-1336   Mib/herc2 domain  
gi|126032348|ref|NP_004658.3|   2.62e-21   1863-1929   Mib/herc2 domain  
gi|282394030|ref|NP_543151.2|   4.05e-22   121-194   Mib/herc2 domain  
  4.45e-22   266-340   Mib/herc2 domain  
gi|282394032|ref|NP_001164157.1|   4.05e-22   121-194   Mib/herc2 domain  
  4.45e-22   266-340   Mib/herc2 domain  
gi|282394034|ref|NP_001164158.1|   3.92e-22   107-180   Mib/herc2 domain  
  4.45e-22   252-326   Mib/herc2 domain  
gi|282394036|ref|NP_001164159.1|   3.66e-22   121-194   Mib/herc2 domain  
  0.0000000196   266-293,341-371   Mib/herc2 domain  
gi|282394038|ref|NP_001164160.1|   2.48e-22   6-79   Mib/herc2 domain  
  0.0000000109   151-178,226-256   Mib/herc2 domain  
gi|30348954|ref|NP_065825.1|   3.14e-23   145-220   Mib/herc2 domain  
  6.67e-20   11-73   Mib/herc2 domain  

Mus musculus 63_37 (longest transcript per gene) (Duplicate) has 6 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000046766   2.22e-22   1268-1336   Mib/herc2 domain  
ENSMUSP00000054428   3.14e-23   145-220   Mib/herc2 domain  
  6.67e-20   11-73   Mib/herc2 domain  
ENSMUSP00000075579   2.48e-21   1864-1930   Mib/herc2 domain  
ENSMUSP00000076814   2.75e-22   151-225   Mib/herc2 domain  
  3.14e-22   6-79   Mib/herc2 domain  

Loa loa v3.3 (Request) has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
LOAG_00153T0   2.88e-18   1495-1555   Mib/herc2 domain  
LOAG_00153T1   2.35e-18   1495-1555   Mib/herc2 domain  

Wuchereria bancrofti v1.0 (Request) has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
WUBG_09575T0   2.48e-19   285-345   Mib/herc2 domain  

Brugia malayi v1.0 (Duplicate) has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Bm1_38845   1.16e-18   1461-1522   Mib/herc2 domain  

Homo sapiens 69_37 has 7 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSP00000261537   3.14e-23   145-220   Mib/herc2 domain  
  6.67e-20   11-73   Mib/herc2 domain  
ENSP00000261609   2.62e-21   1863-1929   Mib/herc2 domain  
ENSP00000382269   2.22e-22   1268-1336   Mib/herc2 domain  
ENSP00000428660   4.05e-22   121-194   Mib/herc2 domain  
  4.45e-22   266-340   Mib/herc2 domain  
ENSP00000458379   2.62e-21   1863-1929   Mib/herc2 domain  

Pan troglodytes 69_2.1.4 has 4 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPTRP00000016856   3.14e-23   144-219   Mib/herc2 domain  
  5.89e-16   11-68   Mib/herc2 domain  
ENSPTRP00000051666   2.48e-21   1764-1830   Mib/herc2 domain  
ENSPTRP00000057753   2.22e-22   1270-1338   Mib/herc2 domain  

Gorilla gorilla 69_3.1 has 6 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSGGOP00000012422   3.14e-23   145-220   Mib/herc2 domain  
  6.67e-20   11-73   Mib/herc2 domain  
ENSGGOP00000012529   2.48e-21   1834-1900   Mib/herc2 domain  
ENSGGOP00000018566   3.01e-22   6-79   Mib/herc2 domain  
  3.4e-22   151-225   Mib/herc2 domain  
ENSGGOP00000020816   2.22e-22   1270-1338   Mib/herc2 domain  

Pongo abelii 69_2 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPPYP00000002312   4.18e-22   48-121   Mib/herc2 domain  
ENSPPYP00000006507   2.22e-22   1268-1336   Mib/herc2 domain  
ENSPPYP00000007118   6.8e-22   781-847   Mib/herc2 domain  

Nomascus leucogenys 69_1.0 has 5 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSNLEP00000000151   3.92e-22   106-179   Mib/herc2 domain  
ENSNLEP00000008295   3.01e-23   134-209   Mib/herc2 domain  
  0.0000000157   4-62   Mib/herc2 domain  
ENSNLEP00000012856   2.75e-22   590-656   Mib/herc2 domain  
ENSNLEP00000019362   2.22e-22   1269-1337   Mib/herc2 domain  

Macaca mulatta 69_1 has 6 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMMUP00000004175   1.83e-22   783-851   Mib/herc2 domain  
ENSMMUP00000005845   2.48e-21   1683-1749   Mib/herc2 domain  
ENSMMUP00000013391   3.14e-23   145-220   Mib/herc2 domain  
  6.67e-20   11-73   Mib/herc2 domain  
ENSMMUP00000017013   3.79e-22   63-136   Mib/herc2 domain  
  6.28e-22   209-282   Mib/herc2 domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   11271 11271
No Yes Homo sapiens 76_38 Human 31 20
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 4 3
No Yes Gorilla gorilla 76_3.1 Western gorilla 10 7
No Yes Pongo abelii 76_2 Sumatran orangutan 3 3
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 5 4
No Yes Papio anubis 76 Olive baboon 6 4
No Yes Macaca mulatta 76_1 Rhesus monkey 16 11
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 12 9
No Yes Otolemur garnettii 76_3 Small-eared galago 7 4
No Yes Microcebus murinus 76_1 Gray mouse lemur 4 3
No Yes Rattus norvegicus 76_5.0 Norway rat 6 4
No Yes Mus musculus 76_38 House mouse 11 8
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 4 4
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 4 3
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 6 4
No Yes Cavia porcellus 76_3 Domestic guinea pig 5 4
No Yes Oryctolagus cuniculus 76_2 Rabbit 4 3
No Yes Ochotona princeps 76 American pika 3 3
No Yes Tupaia belangeri 76 Northern tree shrew 2 2
No Yes Sus scrofa 76_10.2 Pig 8 5
No Yes Bos taurus 76_3.1 Cattle 7 5
No Yes Ovis aries 76_3.1 Sheep 5 4
No Yes Vicugna pacos 76_1 Alpaca 4 3
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 6 4
No Yes Mustela putorius furo 76_1.0 Domestic ferret 6 4
No Yes Ailuropoda melanoleuca 76_1 Giant panda 6 4
No Yes Canis familiaris 76_3.1 Dog 9 6
No Yes Felis catus 76_6.2 Domestic cat 4 4
No Yes Equus caballus 76_2 Horse 6 5
No Yes Myotis lucifugus 76_2.0 Little brown bat 3 3
No Yes Pteropus vampyrus 76_1 Large flying fox 5 4
No Yes Sorex araneus 76_1 European shrew 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 2 2
No Yes Procavia capensis 76_1 Cape rock hyrax 4 4
No Yes Loxodonta africana 76_3 African savanna elephant 7 5
No Yes Echinops telfairi 76 Small Madagascar hedgehog 4 2
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 6 5
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 3 2
No Yes Macropus eugenii 76_1.0 Tammar wallaby 5 4
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 8 7
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 6 4
No Yes Ornithorhynchus anatinus 76_5 Platypus 4 3
No Yes Saccoglossus kowalevskii v3.0   24 20
No Yes Petromyzon marinus 76_7.0 Sea lamprey 4 2
No Yes Meleagris gallopavo 76_2 Turkey 5 4
No Yes Gallus gallus 76_4 Chicken 6 4
No Yes Anas platyrhynchos 76_1.0 Mallard 5 4
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 7 5
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 6 4
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 6 4
No Yes Anolis carolinensis 76_2.0 Green anole 5 4
No Yes Xenopus laevis African clawed frog 14 7
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 11 7
No Yes Latimeria chalumnae 76_1 Coelacanth 8 5
No Yes Lepisosteus oculatus 76 Spotted gar 9 7
No Yes Gadus morhua 76_1 Atlantic cod 6 4
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 6 4
No Yes Takifugu rubripes 76_4 Torafugu 16 9
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 6 4
No Yes Oryzias latipes 76_1 Japanese medaka 8 5
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 6 4
No Yes Poecilia formosa 76 Amazon molly 6 4
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 9 7
No Yes Astyanax mexicanus 76 Mexican tetra 6 4
No Yes Danio rerio 76_9 Zebrafish 5 4
No Yes Oikopleura dioica   2 1
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 24 15
No Yes Ciona intestinalis 76 Vase tunicate 7 4
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 38 29
No Yes Adineta vaga   4 2
No Yes Octopus bimaculoides 280   11 11
No Yes Crassostrea gigas 22 Pacific oyster 72 42
No Yes Lottia gigantea Owl limpet 7 4
No Yes Helobdella robusta   4 3
No Yes Capitella sp. I   2 2
No Yes Danaus plexippus OGS1.0 Monarch butterfly 2 2
No Yes Heliconius melpomene Postman butterfly 4 3
No Yes Bombyx mori Domestic silkworm 2 2
No Yes Nasonia vitripennis Jewel wasp 4 3
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 7 5
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 6 4
No Yes Linepithema humile v1.1 Argentine ant 6 4
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 6 4
No Yes Solenopsis invicta v.2.2.3 Red fire ant 6 4
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 6 4
No Yes Atta cephalotes v1.1   6 4
No Yes Camponotus floridanus v3.3 Florida carpenter ant 6 4
No Yes Lucilia cuprina Australian sheep blowfly 7 5
No Yes Drosophila grimshawi 1.3   8 5
No Yes Drosophila willistoni 1.3   6 4
No Yes Drosophila pseudoobscura 2.13   5 3
No Yes Drosophila persimilis 1.3   6 4
No Yes Drosophila suzukii   6 5
No Yes Drosophila yakuba 1.3   6 4
No Yes Drosophila simulans 1.3   6 3
No Yes Drosophila sechellia 1.3   6 4
No Yes Drosophila melanogaster 76_5 Fruit fly 8 5
No Yes Drosophila erecta 1.3   6 4
No Yes Drosophila ananassae 1.3   6 4
No Yes Drosophila virilis 1.2   6 4
No Yes Drosophila mojavensis 1.3   6 4
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 7 5
No Yes Culex pipiens quinquefasciatus Southern house mosquito 6 4
No Yes Anopheles darlingi 22 American malaria mosquito 6 4
No Yes Anopheles gambiae 49_3j African malaria mosquito 6 4
No Yes Tribolium castaneum 3.0 Red flour beetle 6 4
No Yes Pediculus humanus corporis (Early assembly) Human body louse 6 4
No Yes Acyrthosiphon pisum Pea aphid 3 2
No Yes Rhodnius prolixus 22   5 4
No Yes Daphnia pulex Common water flea 8 5
No Yes Strigamia maritima 22   6 4
No Yes Sarcoptes scabiei   2 1
No Yes Tetranychus urticae Two-spotted spider mite 3 2
No Yes Ixodes scapularis (Preliminary) Black-legged tick 6 3
No Yes Pristionchus pacificus   1 1
No Yes Onchocerca volvulus 22   1 1
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 4 4
No Yes Caenorhabditis japonica   1 1
No Yes Caenorhabditis brenneri   1 1
No Yes Caenorhabditis remanei   1 1
No Yes Caenorhabditis elegans 76_235 Roundworm 1 1
No Yes Caenorhabditis briggsae 2   1 1
No Yes Hymenolepis microstoma   4 2
No Yes Echinococcus multilocularis   2 1
No Yes Echinococcus granulosus   3 1
No Yes Taenia solium Pork tapeworm 3 1
No Yes Schistosoma mansoni   2 1
No Yes Mnemiopsis leidyi Sea walnut 1 1
No Yes Acropora digitifera v1.0   13 8
No Yes Nematostella vectensis 1.0 Starlet sea anemone 5 4
No Yes Hydra vulgaris   3 2
No Yes Amphimedon queenslandica   8 6
No Yes Trichoplax adhaerens   1 1
No Yes Proterospongia sp. ATCC 50818   3 3
No Yes Monosiga brevicollis   1 1
No Yes Entamoeba dispar 1.2   6 3
No Yes Entamoeba invadens 1.2   8 4
No Yes Entamoeba histolytica 1   5 3
No Yes Chlamydomonas reinhardtii 4.0   6 5
No Yes Cyanophora paradoxa   8 4
No Yes Trypanosoma vivax   1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Ectocarpus siliculosus   3 3
No Yes Albugo laibachii 22   1 1
No Yes Pythium iwayamai DAOM BR242034 22   4 3
No Yes Pythium arrhenomanes ATCC 12531 22   2 2
No Yes Pythium ultimum v1.7-2   3 2
No Yes Pythium aphanidermatum DAOM BR444 22   3 3
No Yes Pythium irregulare DAOM BR486 22   3 2
No Yes Pythium vexans DAOM BR484 22   4 3
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 1 1
No Yes Phytophthora sojae 1.1   1 1
No Yes Phytophthora infestans T30-4   4 3
No Yes Phytophthora capsici   1 1
No Yes Hyaloperonospora arabidopsidis 22   1 1
No Yes Fragilariopsis cylindrus   1 1
No Yes Symbiodinium minutum clade B1 v1.2   10 6
No Yes Guillardia theta CCMP2712 v1.0   4 4
No Yes Alkaliphilus metalliredigens QYMF   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 11 7
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 6 4
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 6 4
No Yes Ascaris suum Victoria/Ghent Pig roundworm 1 1
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 37 23
No Yes Homo sapiens (NCBI version) Human 14 8
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 6 4
No Yes Loa loa v3.3 (Request) Eye worm 2 2
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 1 1
No Yes Homo sapiens 69_37 Human 7 5
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 4 3
No Yes Gorilla gorilla 69_3.1 Western gorilla 6 4
No Yes Pongo abelii 69_2 Sumatran orangutan 3 3
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 5 4
No Yes Macaca mulatta 69_1 Rhesus monkey 6 4
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 5 4
No Yes Otolemur garnettii 69_3 Small-eared galago 5 3
No Yes Microcebus murinus 69_1 Gray mouse lemur 4 3
No Yes Rattus norvegicus 69_3.4 Norway rat 6 4
No Yes Mus musculus 69_38 House mouse 6 4
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 4 4
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 4 3
No Yes Cavia porcellus 69_3 Domestic guinea pig 5 4
No Yes Oryctolagus cuniculus 69_2 Rabbit 6 4
No Yes Ochotona princeps 69 American pika 3 3
No Yes Tupaia belangeri 69 Northern tree shrew 2 2
No Yes Sus scrofa 69_10.2 Pig 6 4
No Yes Bos taurus 69_3.1 Cattle 6 4
No Yes Vicugna pacos 69_1 Alpaca 4 3
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 6 4
No Yes Mustela putorius furo 69_1.0 Domestic ferret 6 4
No Yes Ailuropoda melanoleuca 69_1 Giant panda 6 4
No Yes Canis familiaris 69_3.1 Dog 6 4
No Yes Felis catus 69 Domestic cat 2 2
No Yes Equus caballus 69_2 Horse 5 4
No Yes Myotis lucifugus 69_2.0 Little brown bat 3 3
No Yes Pteropus vampyrus 69_1 Large flying fox 5 4
No Yes Sorex araneus 69_1 European shrew 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 2 2
No Yes Procavia capensis 69_1 Cape rock hyrax 4 4
No Yes Loxodonta africana 69_3 African savanna elephant 5 4
No Yes Echinops telfairi 69 Small Madagascar hedgehog 4 2
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 4 3
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 3 2
No Yes Macropus eugenii 69_1.0 Tammar wallaby 5 4
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 5 4
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 6 4
No Yes Ornithorhynchus anatinus 69_5 Platypus 4 3
No Yes Petromyzon marinus 69_7.0 Sea lamprey 4 2
No Yes Meleagris gallopavo 69_2 Turkey 5 4
No Yes Gallus gallus 69_2 Chicken 7 5
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 7 5
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 6 4
No Yes Anolis carolinensis 69_2.0 Green anole 5 4
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 6 4
No Yes Latimeria chalumnae 69_1 Coelacanth 7 4
No Yes Gadus morhua 69_1 Atlantic cod 6 4
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 6 4
No Yes Takifugu rubripes 69_4 Torafugu 6 4
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 6 4
No Yes Oryzias latipes 69_1 Japanese medaka 6 4
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 6 4
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 6 4
No Yes Danio rerio 69_9 Zebrafish 4 3
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 4 3
No Yes Ciona intestinalis 69 Vase tunicate 7 4
No Yes Drosophila melanogaster 69_5 Fruit fly 6 4
No Yes Caenorhabditis elegans 69_215 Roundworm 1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   5646 3979
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes Protozoadb 2010_08 (Protozoadb)   22 12
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   303 216
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   3021 2111
No Yes Global Ocean Sampling Expedition (GOS)   7 4
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   8 5
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   10 10
No Yes TargetDB (Targets)   2 2

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