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AlaX-M N-terminal domain-like family domain assignments
in
all archaeal genomes

Assignment details

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16 selected genomes have 16 significant domains in 16 proteins.


Thermococcus sp. 4557 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|341581198|ref|YP_004761690.1|   4.24e-22   0.000014   1-84   2e1b A:1-87  
 
Weak hits:
gi|341582378|ref|YP_004762870.1|   0.00000000000000254   0.00065   1-89   2e1b A:1-87  
gi|341582406|ref|YP_004762898.1|   2.44e-18   0.00049   512-599   2e1b A:1-87  

Thermococcus onnurineus NA1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|212224048|ref|YP_002307284.1|   1.45e-21   0.0000172   1-84   2e1b A:1-87  
 
Weak hits:
gi|212224880|ref|YP_002308116.1|   5.65e-20   0.00024   512-595   2e1b A:1-87  
gi|212224908|ref|YP_002308144.1|   0.0000000000000494   0.0016   1-90   2e1b A:1-87  

Thermococcus kodakarensis KOD1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|57640919|ref|YP_183397.1|   3.18e-22   0.0000108   2-85   2e1b A:1-87  
 
Weak hits:
gi|57641502|ref|YP_183980.1|   8.47e-19   0.00045   516-600   2e1b A:1-87  
gi|57641542|ref|YP_184020.1|   0.00000000000000706   0.00068   1-90   2e1b A:1-87  

Thermococcus gammatolerans EJ3 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|240103692|ref|YP_002960001.1|   1.38e-21   0.0000115   1-84   2e1b A:1-87  
 
Weak hits:
gi|240102207|ref|YP_002958515.1|   1.34e-16   0.00078   1-90   2e1b A:1-87  
gi|240102368|ref|YP_002958676.1|   1.91e-19   0.00049   512-597   2e1b A:1-87  

Thermococcus sibiricus MM 739 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|242398217|ref|YP_002993641.1|   2.01e-21   0.0000256   1-83   2e1b A:1-87  
 
Weak hits:
gi|242399764|ref|YP_002995189.1|   0.00000000000000424   0.0016   1-90   2e1b A:1-87  
gi|242399787|ref|YP_002995212.1|   2.82e-18   0.00029   514-593   2e1b A:1-87  

Thermococcus barophilus MP has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|315230057|ref|YP_004070493.1|   1.38e-21   0.0000115   1-84   2e1b A:1-87  
 
Weak hits:
gi|315231455|ref|YP_004071891.1|   0.00000000000000706   0.00055   1-90   2e1b A:1-87  
gi|315231477|ref|YP_004071913.1|   3.43e-20   0.00022   512-595   2e1b A:1-87  

Pyrococcus sp. ST04 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|389851599|ref|YP_006353833.1|   3.18e-23   0.0000151   1-83   2e1b A:1-87  
 
Weak hits:
gi|389851781|ref|YP_006354015.1|   2.9e-18   0.00059   1-91   2e1b A:1-87  
gi|389851864|ref|YP_006354098.1|   1.91e-18   0.00037   508-592   2e1b A:1-87  

Pyrococcus yayanosii CH1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|337284929|ref|YP_004624403.1|   3.5e-22   0.0000193   1-82   2e1b A:1-87  
 
Weak hits:
gi|337284835|ref|YP_004624309.1|   1.41e-19   0.00028   512-597   2e1b A:1-87  
gi|337285043|ref|YP_004624517.1|   3.32e-19   0.00054   1-90   2e1b A:1-87  

Pyrococcus horikoshii OT3 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|14590056|ref|NP_142120.1|   4.3e-22   0.0000033   2-87   2e1b A:1-87  
 
Weak hits:
gi|14590220|ref|NP_142285.1|   6.36e-19   0.0006   514-601   2e1b A:1-87  
gi|14591706|ref|NP_143794.1|   1.84e-19   0.00081   2-91   2e1b A:1-87  

Pyrococcus abyssi GE5 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|14520326|ref|NP_125801.1|   2.9e-22   0.0000096   1-84   2e1b A:1-87  
 
Weak hits:
gi|14521870|ref|NP_127346.1|   8.12e-20   0.00063   514-600   2e1b A:1-87  
gi|14521955|ref|NP_127432.1|   2.72e-16   0.00063   3-91   2e1b A:1-87  

Pyrococcus furiosus COM1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|397652200|ref|YP_006492781.1|   8.83e-22   0.0000144   1-83   2e1b A:1-87  
 
Weak hits:
gi|397650768|ref|YP_006491349.1|   1.13e-19   0.00046   514-601   2e1b A:1-87  
gi|397652102|ref|YP_006492683.1|   8.12e-18   0.00078   2-90   2e1b A:1-87  

Thermococcus sp. AM4 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|223478202|ref|YP_002582677.1|   1.66e-21   0.0000131   1-84   2e1b A:1-87  
 
Weak hits:
gi|223477585|ref|YP_002582010.1|   7.77e-19   0.00047   512-597   2e1b A:1-87  
gi|350525931|ref|YP_004885464.1|   3.25e-17   0.00055   1-89   2e1b A:1-87  

Thermococcus sp. CL1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|390961966|ref|YP_006425800.1|   9.89e-21   0.0000133   1-84   2e1b A:1-87  
 
Weak hits:
gi|390961091|ref|YP_006424925.1|   0.00000000000000812   0.00082   1-89   2e1b A:1-87  
gi|390961120|ref|YP_006424954.1|   5.65e-19   0.00052   512-597   2e1b A:1-87  

Thermococcus litoralis DSM 5473 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|530548210|ref|YP_008428746.1|   1.31e-21   0.0000213   1-83   2e1b A:1-87  
 
Weak hits:
gi|530548761|ref|YP_008429307.1|   0.0000000000000215   0.001   1-90   2e1b A:1-87  
gi|530548789|ref|YP_008429337.1|   1.31e-20   0.00026   510-593   2e1b A:1-87  

Pyrococcus sp. NA2 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|332158282|ref|YP_004423561.1|   6e-22   0.0000114   1-84   2e1b A:1-87  
 
Weak hits:
gi|332158482|ref|YP_004423761.1|   2.05e-19   0.00034   1-91   2e1b A:1-87  
gi|332158554|ref|YP_004423833.1|   3.88e-19   0.00051   515-601   2e1b A:1-87  

Pyrococcus furiosus DSM 3638 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|18976458|ref|NP_577815.1|   8.83e-22   0.0000144   1-83   2e1b A:1-87  
 
Weak hits:
gi|18976557|ref|NP_577914.1|   8.12e-18   0.00078   2-90   2e1b A:1-87  
gi|18976642|ref|NP_577999.1|   1.13e-19   0.00046   514-601   2e1b A:1-87  

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Select to display   Genome       Domains   Proteins
No Yes ALL   125 125
No Yes Thermococcus sp. 4557   1 1
No Yes Thermococcus onnurineus NA1   1 1
No Yes Thermococcus kodakarensis KOD1   1 1
No Yes Thermococcus gammatolerans EJ3   1 1
No Yes Thermococcus sibiricus MM 739   1 1
No Yes Thermococcus barophilus MP   1 1
No Yes Pyrococcus sp. ST04   1 1
No Yes Pyrococcus yayanosii CH1   1 1
No Yes Pyrococcus horikoshii OT3   1 1
No Yes Pyrococcus abyssi GE5   1 1
No Yes Pyrococcus furiosus COM1   1 1
No Yes Thermococcus sp. AM4   1 1
No Yes Thermococcus sp. CL1   1 1
No Yes Thermococcus litoralis DSM 5473   1 1
No Yes Pyrococcus sp. NA2   1 1
No Yes Pyrococcus furiosus DSM 3638   1 1
No Yes NCBI 2017_08 genome   46 46
No Yes STRING v9.0.5 (STRING)   7 7
No Yes Uniprot 2018_03 genome   38 38
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   1 1
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   2 2
No Yes TargetDB (Targets)   4 4

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