SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


Acetoacetate decarboxylase-like superfamily domain assignments
in
Catenulispora acidiphila DSM 44928

Assignment details

(show help)


Catenulispora acidiphila DSM 44928 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|256390089|ref|YP_003111653.1|   0.000000000000497   24-175   Acetoacetate decarboxylase-like  
gi|256391481|ref|YP_003113045.1|   4.97e-47   28-232   Acetoacetate decarboxylase-like  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a Acetoacetate decarboxylase-like domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   35617 35617
No Yes Adineta vaga   1 1
No Yes Proterospongia sp. ATCC 50818   2 1
No Yes Monosiga brevicollis   2 1
No Yes Sporisorium reilianum 22   1 1
No Yes Ustilago maydis   1 1
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   2 2
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   2 2
No Yes Melampsora laricis-populina   2 2
No Yes Rhodotorula graminis WP1 v1.0   3 3
No Yes Microbotryum violaceum 22   1 1
No Yes Sphaerobolus stellatus v1.0   3 3
No Yes Amanita thiersii Skay4041 v1.0   3 3
No Yes Stereum hirsutum FP-91666 SS1 v1.0   1 1
No Yes Heterobasidion annosum   1 1
No Yes Phanerochaete chrysosporium RP-78 2.1   1 1
No Yes Dichomitus squalens   1 1
No Yes Trametes versicolor v1.0   1 1
No Yes Daldinia eschscholzii EC12 v1.0   1 1
No Yes Apiospora montagnei NRRL 25634 v1.0   3 3
No Yes Magnaporthe poae ATCC 64411 22   1 1
No Yes Magnaporthe grisea 70-15   1 1
No Yes Thielavia terrestris NRRL 8126   2 2
No Yes Chaetomium globosum CBS 148.51   1 1
No Yes Cryphonectria parasitica Chestnut blight fungus 1 1
No Yes Verticillium albo-atrum VaMs.102   3 3
No Yes Verticillium dahliae VdLs.17   1 1
No Yes Glomerella graminicola 22   3 3
No Yes Fusarium graminearum   3 3
No Yes Nectria haematococca mpVI   7 7
No Yes Fusarium oxysporum f. sp. lycopersici 4286   8 8
No Yes Fusarium verticillioides 7600   6 6
No Yes Trichoderma asperellum CBS 433.97 v1.0   4 4
No Yes Trichoderma atroviride   3 3
No Yes Trichoderma citrinoviride v1.0   1 1
No Yes Trichoderma reesei 1.2   1 1
No Yes Trichoderma virens Gv29-8   2 2
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   3 3
No Yes Amorphotheca resinae v1.0 Creosote fungus 1 1
No Yes Botrytis cinerea B05.10   1 1
No Yes Sclerotinia sclerotiorum   1 1
No Yes Didymella exigua CBS 183.55 v1.0   2 2
No Yes Leptosphaeria maculans 22   2 2
No Yes Setosphaeria turcica v1.0   6 6
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   3 3
No Yes Cochliobolus victoriae FI3 v1.0   3 3
No Yes Cochliobolus carbonum 26-R-13 v1.0   3 3
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 5 5
No Yes Alternaria brassicicola   1 1
No Yes Cochliobolus lunatus m118 v2.0   4 4
No Yes Pyrenophora teres f. teres 22   3 3
No Yes Pyrenophora tritici-repentis   4 4
No Yes Stagonospora nodorum   3 3
No Yes Mycosphaerella graminicola IPO323   2 2
No Yes Zasmidium cellare ATCC 36951 v1.0   4 4
No Yes Dothistroma septosporum   2 2
No Yes Septoria musiva v1.0   2 2
No Yes Mycosphaerella fijiensis CIRAD86   2 2
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   2 2
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Aspergillus zonatus v1.0   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   1 1
No Yes Penicillium chrysogenum v1.0   1 1
No Yes Aspergillus acidus v1.0   3 3
No Yes Aspergillus fumigatus Af293   2 2
No Yes Aspergillus brasiliensis v1.0   3 3
No Yes Aspergillus nidulans FGSC A4   3 3
No Yes Aspergillus sydowii v1.0   6 6
No Yes Aspergillus versicolor v1.0   7 7
No Yes Aspergillus glaucus   2 2
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Neosartorya fischeri NRRL 181   2 2
No Yes Aspergillus terreus NIH2624   2 2
No Yes Aspergillus tubingensis v1.0   3 3
No Yes Aspergillus wentii v1.0   2 2
No Yes Aspergillus oryzae RIB40   4 4
No Yes Aspergillus niger 22   3 3
No Yes Aspergillus niger ATCC 1015   3 3
No Yes Aspergillus flavus NRRL3357   5 5
No Yes Penicillium marneffei ATCC 18224   1 1
No Yes Selaginella moellendorffii   2 2
No Yes Picea abies Norway spruce 1 1
No Yes Eucalyptus grandis v201 Rose gum 2 2
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221   9 9
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 1 1
No Yes Thellungiella halophila v173   2 2
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 2 2
No Yes Capsella rubella v183   1 1
No Yes Arabidopsis thaliana 10 Thale cress 5 5
No Yes Carica papaya Papaya 1 1
No Yes Medicago truncatula Barrel medic 6 6
No Yes Phaseolus vulgaris v186 French bean 1 1
No Yes Glycine max v109 Soybean 1 1
No Yes Cucumis sativus v122 Cucumber 1 1
No Yes Fragaria vesca Wild strawberry 1 1
No Yes Malus domestica v196 Apple 1 1
No Yes Prunus persica v139 Peach 1 1
No Yes Linum usitatissimum v200 Flax 1 1
No Yes Manihot esculenta v147 Cassava 2 2
No Yes Populus trichocarpa v156 Black cottonwood 1 1
No Yes Vitis vinifera Wine grape 1 1
No Yes Mimulus guttatus v140 Spotted monkey flower 10 10
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 2 2
No Yes Aquilegia coerulea v195   10 10
No Yes Triticum aestivum 22 Bread wheat 1 1
No Yes Aegilops tauschii 22   1 1
No Yes Oryza barthii 22 African wild rice 1 1
No Yes Oryza meridionalis 22   7 7
No Yes Oryza glumaepatula 22   5 5
No Yes Oryza punctata 22   3 3
No Yes Oryza nivara 22   1 1
No Yes Oryza brachyantha 22 Malo sina 1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 3 3
No Yes Oryza sativa v193 Rice 3 3
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 1 1
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Setaria italica v164 Foxtail millet 1 1
No Yes Zea mays v181 Maize 5 5
No Yes Sorghum bicolor Sorghum 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Amborella trichopoda 22   1 1
No Yes Physcomitrella patens   2 2
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Ostreococcus sp. RCC809   1 1
No Yes Ostreococcus lucimarinus CCE9901   1 1
No Yes Ostreococcus tauri   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Micromonas sp. RCC299   2 2
No Yes Micromonas pusilla CCMP1545 v3.0   2 2
No Yes Bigelowiella natans CCMP2755 22   2 2
No Yes Trypanosoma congolense 2.4   1 1
No Yes Albugo laibachii 22   3 3
No Yes Tetrahymena thermophila SB210 1   2 1
No Yes Naegleria gruberi   2 1
No Yes Emiliania huxleyi CCMP1516   2 2
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Gloeobacter violaceus PCC 7421   1 1
No Yes Rivularia sp. PCC 7116   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes Nostoc punctiforme PCC 73102   2 2
No Yes Nostoc sp. PCC 7120   2 2
No Yes Nostoc sp. PCC 7524   1 1
No Yes Conexibacter woesei DSM 14684   2 2
No Yes Slackia heliotrinireducens DSM 20476   1 1
No Yes Olsenella uli DSM 7084   1 1
No Yes Rubrobacter xylanophilus DSM 9941   1 1
No Yes Ilumatobacter coccineus   3 3
No Yes Thermobispora bispora DSM 43833   1 1
No Yes Acidothermus cellulolyticus 11B   1 1
No Yes Modestobacter marinus   1 1
No Yes Geodermatophilus obscurus DSM 43160   2 2
No Yes Kineococcus radiotolerans SRS30216   1 1
No Yes Catenulispora acidiphila DSM 44928   2 2
No Yes Stackebrandtia nassauensis DSM 44728   1 1
No Yes Frankia sp. EAN1pec   2 2
No Yes Frankia alni ACN14a   3 3
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   1 1
No Yes Thermomonospora curvata DSM 43183   1 1
No Yes Streptosporangium roseum DSM 43021   3 3
No Yes Kitasatospora setae KM-6054   1 1
No Yes Streptomyces coelicolor A3(2)   1 1
No Yes Streptomyces sp. PAMC26508   1 1
No Yes Streptomyces flavogriseus ATCC 33331   1 1
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces griseus subsp. griseus NBRC 13350   2 2
No Yes Streptomyces bingchenggensis BCW-1   3 3
No Yes Streptomyces violaceusniger Tu 4113   2 2
No Yes Streptomyces avermitilis MA-4680   2 2
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   3 3
No Yes Streptomyces scabiei 87.22   1 1
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   2 2
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Saccharomonospora viridis DSM 43017   1 1
No Yes Pseudonocardia dioxanivorans CB1190   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   2 2
No Yes Amycolatopsis mediterranei U32   2 2
No Yes Kribbella flavida DSM 17836   1 1
No Yes Nocardioides sp. JS614   1 1
No Yes Microlunatus phosphovorus NM-1   1 1
No Yes Verrucosispora maris AB-18-032   2 2
No Yes Micromonospora sp. L5   2 2
No Yes Micromonospora aurantiaca ATCC 27029   2 2
No Yes Actinoplanes sp. N902-109   2 2
No Yes Actinoplanes sp. SE50/110   2 2
No Yes Actinoplanes missouriensis 431   2 2
No Yes Tsukamurella paurometabola DSM 20162   1 1
No Yes Gordonia sp. KTR9   2 2
No Yes Gordonia polyisoprenivorans VH2   3 3
No Yes Gordonia bronchialis DSM 43247   2 2
No Yes Rhodococcus jostii RHA1   4 4
No Yes Rhodococcus equi 103S   2 2
No Yes Rhodococcus opacus B4   2 2
No Yes Rhodococcus erythropolis PR4   2 2
No Yes Nocardia farcinica IFM 10152   1 1
No Yes Amycolicicoccus subflavus DQS3-9A1   4 4
No Yes Mycobacterium sp. JLS   1 1
No Yes Mycobacterium intracellulare ATCC 13950   2 2
No Yes Mycobacterium avium 104   2 2
No Yes Mycobacterium vanbaalenii PYR-1   2 2
No Yes Mycobacterium canettii CIPT 140010059   2 2
No Yes Mycobacterium africanum GM041182   1 1
No Yes Mycobacterium tuberculosis KZN 1435   1 1
No Yes Mycobacterium tuberculosis   1 1
No Yes Mycobacterium bovis BCG str. Pasteur 1173P2   1 1
No Yes Mycobacterium rhodesiae NBB3   3 3
No Yes Mycobacterium ulcerans Agy99   2 2
No Yes Mycobacterium gilvum PYR-GCK   1 1
No Yes Mycobacterium chubuense NBB4   1 1
No Yes Mycobacterium marinum M   3 3
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Microbacterium testaceum StLB037   1 1
No Yes Clavibacter michiganensis subsp. michiganensis NCPPB 382   1 1
No Yes Isoptericola variabilis 225   1 1
No Yes Cellulomonas flavigena DSM 20109   1 1
No Yes Cellulomonas fimi ATCC 484   3 3
No Yes [Cellvibrio] gilvus ATCC 13127   2 2
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Arthrobacter sp. FB24   2 2
No Yes Renibacterium salmoninarum ATCC 33209   1 1
No Yes Sphaerobacter thermophilus DSM 20745   1 1
No Yes Herpetosiphon aurantiacus DSM 785   2 2
No Yes Truepera radiovictrix DSM 17093   1 1
No Yes Deinococcus gobiensis I-0   2 2
No Yes Deinococcus deserti VCD115   1 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Deinococcus radiodurans R1   2 2
No Yes Acetobacterium woodii DSM 1030   1 1
No Yes Clostridium saccharolyticum WM1   1 1
No Yes Clostridium phytofermentans ISDg   1 1
No Yes Clostridium beijerinckii NCIMB 8052   1 1
No Yes Clostridium acetobutylicum ATCC 824   1 1
No Yes Lactobacillus casei ATCC 334   1 1
No Yes Lactobacillus salivarius CECT 5713   1 1
No Yes Lactobacillus plantarum JDM1   1 1
No Yes Exiguobacterium sp. MH3   1 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   1 1
No Yes Brevibacillus brevis NBRC 100599   1 1
No Yes Paenibacillus terrae HPL-003   1 1
No Yes Paenibacillus polymyxa M1   2 2
No Yes Solibacillus silvestris StLB046   1 1
No Yes Lysinibacillus sphaericus C3-41   1 1
No Yes Halobacillus halophilus DSM 2266   1 1
No Yes Bacillus sp. JS   1 1
No Yes Bacillus amyloliquefaciens FZB42   1 1
No Yes Bacillus atrophaeus 1942   2 2
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus pseudofirmus OF4   1 1
No Yes Bacillus clausii KSM-K16   1 1
No Yes Bacillus megaterium DSM 319   1 1
No Yes Staphylococcus carnosus subsp. carnosus TM300   1 1
No Yes Chlorobium phaeobacteroides DSM 266   1 1
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Salinibacter ruber M8   1 1
No Yes Cyclobacterium marinum DSM 745   1 1
No Yes Marivirga tractuosa DSM 4126   1 1
No Yes Cytophaga hutchinsonii ATCC 33406   1 1
No Yes Pedobacter saltans DSM 12145   1 1
No Yes Owenweeksia hongkongensis DSM 17368   1 1
No Yes Zunongwangia profunda SM-A87   1 1
No Yes Capnocytophaga canimorsus Cc5   1 1
No Yes Candidatus Protochlamydia amoebophila UWE25   1 1
No Yes Phycisphaera mikurensis NBRC 102666   1 1
No Yes Isosphaera pallida ATCC 43644   1 1
No Yes Coraliomargarita akajimensis DSM 45221   1 1
No Yes Thermovirga lienii DSM 17291   1 1
No Yes Turneriella parva DSM 21527   1 1
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   1 1
No Yes Leptospira interrogans serovar Lai str. IPAV   2 2
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   1 1
No Yes Mesotoga prima MesG1.Ag.4.2   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   2 2
No Yes Granulicella tundricola MP5ACTX9   1 1
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Terriglobus roseus DSM 18391   1 1
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Desulfomonile tiedjei DSM 6799   1 1
No Yes Desulfatibacillum alkenivorans AK-01   3 3
No Yes Desulfococcus oleovorans Hxd3   1 1
No Yes Desulfovibrio magneticus RS-1   1 1
No Yes Geobacter sulfurreducens KN400   1 1
No Yes Sorangium cellulosum 'So ce 56'   3 3
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Stigmatella aurantiaca DW4/3-1   5 5
No Yes Corallococcus coralloides DSM 2259   2 2
No Yes Myxococcus xanthus DK 1622   1 1
No Yes Myxococcus fulvus HW-1   1 1
No Yes Chromobacterium violaceum ATCC 12472   1 1
No Yes Thiomonas arsenitoxydans   1 1
No Yes Thiomonas intermedia K12   1 1
No Yes Rubrivivax gelatinosus IL144   1 1
No Yes Leptothrix cholodnii SP-6   1 1
No Yes Burkholderia phytofirmans PsJN   2 2
No Yes Burkholderia phymatum STM815   2 2
No Yes Burkholderia xenovorans LB400   2 2
No Yes Cupriavidus taiwanensis LMG 19424   1 1
No Yes Ralstonia pickettii 12D   1 1
No Yes Ralstonia solanacearum CFBP2957   1 1
No Yes Burkholderia sp. RPE64   1 1
No Yes Burkholderia thailandensis E264   1 1
No Yes Burkholderia pseudomallei 1106a   1 1
No Yes Burkholderia mallei SAVP1   1 1
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Burkholderia cenocepacia HI2424   2 2
No Yes Burkholderia multivorans ATCC 17616   2 2
No Yes Burkholderia vietnamiensis G4   2 2
No Yes Burkholderia gladioli BSR3   1 1
No Yes Burkholderia glumae BGR1   1 1
No Yes Delftia sp. Cs1-4   1 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860   1 1
No Yes Collimonas fungivorans Ter331   1 1
No Yes Bordetella avium 197N   1 1
No Yes Bordetella bronchiseptica RB50   1 1
No Yes Novosphingobium aromaticivorans DSM 12444   1 1
No Yes Sphingobium japonicum UT26S   1 1
No Yes Sphingomonas sp. MM-1   1 1
No Yes Sphingomonas wittichii RW1   3 3
No Yes Pseudovibrio sp. FO-BEG1   1 1
No Yes Tistrella mobilis KA081020-065   1 1
No Yes Azospirillum brasilense Sp245   1 1
No Yes Gluconacetobacter diazotrophicus PAl 5   1 1
No Yes Acidiphilium multivorum AIU301   1 1
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Starkeya novella DSM 506   1 1
No Yes Xanthobacter autotrophicus Py2   1 1
No Yes Azorhizobium caulinodans ORS 571   1 1
No Yes Methylobacterium sp. 4-46   1 1
No Yes Methylobacterium nodulans ORS 2060   2 2
No Yes Rhizobium leguminosarum bv. viciae 3841   1 1
No Yes Agrobacterium vitis S4   2 2
No Yes Mesorhizobium opportunistum WSM2075   1 1
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   1 1
No Yes Mesorhizobium loti MAFF303099   3 3
No Yes Methylocella silvestris BL2   2 2
No Yes Beijerinckia indica subsp. indica ATCC 9039   2 2
No Yes Hyphomicrobium sp. MC1   1 1
No Yes Hyphomicrobium denitrificans ATCC 51888   1 1
No Yes Rhodopseudomonas palustris BisA53   1 1
No Yes Bradyrhizobium japonicum USDA 110   4 4
No Yes Methylocystis sp. SC2   1 1
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Shewanella piezotolerans WP3   1 1
No Yes Shewanella pealeana ATCC 700345   1 1
No Yes Shewanella oneidensis MR-1   1 1
No Yes Shewanella baltica OS185   1 1
No Yes Shewanella woodyi ATCC 51908   1 1
No Yes Shewanella sp. MR-4   1 1
No Yes Shewanella violacea DSS12   1 1
No Yes Marinobacter adhaerens HP15   1 1
No Yes Hahella chejuensis KCTC 2396   1 1
No Yes Legionella longbeachae NSW150   2 2
No Yes Legionella pneumophila str. Corby   1 1
No Yes gamma proteobacterium HdN1   4 4
No Yes Pseudomonas sp. UW4   1 1
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   1 1
No Yes Pseudomonas entomophila L48   1 1
No Yes Pseudomonas putida F1   1 1
No Yes Pseudomonas protegens Pf-5   1 1
No Yes Pseudomonas mendocina ymp   1 1
No Yes Acinetobacter oleivorans DR1   2 2
No Yes Acinetobacter calcoaceticus PHEA-2   1 1
No Yes Acinetobacter baumannii ATCC 17978   1 1
No Yes Francisella sp. TX077308   1 1
No Yes Francisella philomiragia subsp. philomiragia ATCC 25017   1 1
No Yes Francisella cf. novicida 3523   1 1
No Yes Francisella novicida U112   1 1
No Yes Candidatus Korarchaeum cryptofilum OPF8   1 1
No Yes Metallosphaera cuprina Ar-4   1 1
No Yes Metallosphaera sedula DSM 5348   1 1
No Yes Sulfolobus tokodaii str. 7   1 1
No Yes Sulfolobus islandicus Y.N.15.51   3 3
No Yes Sulfolobus solfataricus P2   2 2
No Yes Sulfolobus acidocaldarius DSM 639   1 1
No Yes Vulcanisaeta moutnovskia 768-28   2 2
No Yes Vulcanisaeta distributa DSM 14429   2 2
No Yes Pyrobaculum oguniense TE7   1 1
No Yes halophilic archaeon DL31   1 1
No Yes Methanosaeta concilii GP6   1 1
No Yes Methanospirillum hungatei JF-1   1 1
No Yes Methanoplanus petrolearius DSM 11571   1 1
No Yes Methanoculleus bourgensis MS2   1 1
No Yes Methanoculleus marisnigri JR1   1 1
No Yes Archaeoglobus fulgidus DSM 4304   2 2
No Yes Halopiger xanaduensis SH-6   3 3
No Yes Haloterrigena turkmenica DSM 5511   3 3
No Yes Natrinema sp. J7-2   3 3
No Yes Natrialba magadii ATCC 43099   1 1
No Yes Halorubrum lacusprofundi ATCC 49239   1 1
No Yes Haloquadratum walsbyi DSM 16790   1 1
No Yes Halogeometricum borinquense DSM 11551   1 1
No Yes Haloferax mediterranei ATCC 33500   1 1
No Yes Haloferax volcanii DS2   1 1
No Yes Halomicrobium mukohataei DSM 12286   2 2
No Yes Halorhabdus utahensis DSM 12940   2 2
No Yes Natronomonas pharaonis DSM 2160   1 1
No Yes Haloarcula hispanica ATCC 33960   2 2
No Yes Haloarcula marismortui ATCC 43049   2 2
No Yes Halalkalicoccus jeotgali B3   1 1
No Yes Halobacterium salinarum R1   1 1
No Yes Halobacterium sp. NRC-1   1 1
No Yes Complete genome sequence of Methanobacterium sp. Mb1   1 1
No Yes Ajellomyces dermatitidis ER-3   1 1
No Yes Histoplasma capsulatum H143   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Aspergillus fumigatus A1163   2 2
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 1 1
No Yes Hordeum vulgare 22 Domesticated barley 2 2
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Chroococcidiopsis thermalis PCC 7203   1 1
No Yes Chamaesiphon minutus PCC 6605   1 1
No Yes Cyanobium gracile PCC 6307   1 1
No Yes Crinalium epipsammum PCC 9333   1 1
No Yes Oscillatoria nigro-viridis PCC 7112   1 1
No Yes Oscillatoria acuminata PCC 6304   1 1
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7425   1 1
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   1 1
No Yes Cylindrospermum stagnale PCC 7417   2 2
No Yes Anabaena cylindrica PCC 7122   4 4
No Yes Frankia sp. EuI1c   2 2
No Yes Frankia sp. CcI3   1 1
No Yes Streptomyces rapamycinicus NRRL 5491   3 3
No Yes Streptomyces fulvissimus DSM 40593   2 2
No Yes Streptomyces venezuelae ATCC 10712   2 2
No Yes Streptomyces collinus Tu 365   3 3
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   3 3
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   2 2
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Amycolatopsis mediterranei RB   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis mediterranei S699   2 2
No Yes Amycolatopsis orientalis HCCB10007   3 3
No Yes Actinoplanes friuliensis DSM 7358   2 2
No Yes Rhodococcus pyridinivorans SB3094   2 2
No Yes Rhodococcus erythropolis CCM2595   2 2
No Yes Nocardia brasiliensis ATCC 700358   2 2
No Yes Mycobacterium sp. MOTT36Y   2 2
No Yes Mycobacterium sp. JDM601   2 2
No Yes Mycobacterium liflandii 128FXT   3 3
No Yes Mycobacterium sp. KMS   1 1
No Yes Mycobacterium sp. MCS   1 1
No Yes Mycobacterium yongonense 05-1390   2 2
No Yes Mycobacterium intracellulare MOTT-64   2 2
No Yes Mycobacterium indicus pranii MTCC 9506   2 2
No Yes Mycobacterium intracellulare MOTT-02   1 1
No Yes Mycobacterium avium subsp. paratuberculosis MAP4   2 2
No Yes Mycobacterium avium subsp. paratuberculosis K-10   2 2
No Yes Mycobacterium canettii CIPT 140070017   2 2
No Yes Mycobacterium canettii CIPT 140060008   2 2
No Yes Mycobacterium canettii CIPT 140070008   2 2
No Yes Mycobacterium canettii CIPT 140070010   2 2
No Yes Mycobacterium tuberculosis EAI5/NITR206   1 1
No Yes Mycobacterium tuberculosis EAI5   1 1
No Yes Mycobacterium tuberculosis CAS/NITR204   1 1
No Yes Mycobacterium tuberculosis str. Beijing/NITR203   1 1
No Yes Mycobacterium tuberculosis UT205   1 1
No Yes Mycobacterium tuberculosis RGTB423   1 1
No Yes Mycobacterium tuberculosis RGTB327   1 1
No Yes Mycobacterium tuberculosis CTRI-2   1 1
No Yes Mycobacterium tuberculosis str. Erdman = ATCC 35801   1 1
No Yes Mycobacterium tuberculosis KZN 605   1 1
No Yes Mycobacterium tuberculosis KZN 4207   1 1
No Yes Mycobacterium tuberculosis CCDC5180   1 1
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis CCDC5079   1 1
No Yes Mycobacterium tuberculosis H37Ra   1 1
No Yes Mycobacterium tuberculosis str. Haarlem/NITR202   1 1
No Yes Mycobacterium tuberculosis str. Haarlem   1 1
No Yes Mycobacterium tuberculosis F11   1 1
No Yes Mycobacterium tuberculosis H37Rv   1 1
No Yes Mycobacterium bovis AF2122/97   1 1
No Yes Mycobacterium bovis BCG str. Korea 1168P   1 1
No Yes Mycobacterium bovis BCG str. Mexico   1 1
No Yes Mycobacterium bovis BCG str. Tokyo 172   1 1
No Yes Mycobacterium gilvum Spyr1   1 1
No Yes Mycobacterium smegmatis str. MC2 155   1 1
No Yes Mycobacterium kansasii ATCC 12478   3 3
No Yes Clavibacter michiganensis subsp. sepedonicus   1 1
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   1 1
No Yes Chthonomonas calidirosea T49   1 1
No Yes Deinococcus peraridilitoris DSM 19664   2 2
No Yes Clostridium saccharobutylicum DSM 13864   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   1 1
No Yes Clostridium pasteurianum BC1   1 1
No Yes Clostridium acetobutylicum DSM 1731   1 1
No Yes Clostridium acetobutylicum EA 2018   1 1
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   1 1
No Yes Lactobacillus casei LOCK919   1 1
No Yes Lactobacillus casei W56   1 1
No Yes Lactobacillus casei LC2W   1 1
No Yes Lactobacillus casei BD-II   1 1
No Yes Lactobacillus casei BL23   1 1
No Yes Lactobacillus casei str. Zhang   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus rhamnosus GG   1 1
No Yes Lactobacillus salivarius UCC118   1 1
No Yes Lactobacillus plantarum 16   1 1
No Yes Lactobacillus plantarum ZJ316   1 1
No Yes Lactobacillus plantarum subsp. plantarum ST-III   1 1
No Yes Lactobacillus plantarum subsp. plantarum P-8   1 1
No Yes Lactobacillus plantarum WCFS1   1 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1   1 1
No Yes Paenibacillus mucilaginosus KNP414   1 1
No Yes Paenibacillus mucilaginosus K02   1 1
No Yes Paenibacillus polymyxa CR1   1 1
No Yes Paenibacillus polymyxa SC2   2 2
No Yes Paenibacillus polymyxa E681   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   1 1
No Yes Bacillus amyloliquefaciens LFB112   1 1
No Yes Bacillus amyloliquefaciens CC178   1 1
No Yes Bacillus amyloliquefaciens Y2   1 1
No Yes Bacillus amyloliquefaciens IT-45   1 1
No Yes Bacillus licheniformis 9945A   1 1
No Yes Bacillus subtilis PY79   1 1
No Yes Bacillus subtilis XF-1   1 1
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis BSn5   1 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   1 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   1 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   1 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   1 1
No Yes Bacillus subtilis subsp. natto BEST195   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   1 1
No Yes Bacillus infantis NRRL B-14911   1 1
No Yes Bacillus megaterium WSH-002   1 1
No Yes Bacillus megaterium QM B1551   1 1
No Yes Emticicia oligotrophica DSM 17448   1 1
No Yes Singulisphaera acidiphila DSM 18658   1 1
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   1 1
No Yes Leptospira interrogans serovar Lai str. 56601   2 2
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   2 2
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   1 1
No Yes Geobacter sulfurreducens PCA   1 1
No Yes Sorangium cellulosum So0157-2   3 3
No Yes Myxococcus stipitatus DSM 14675   2 2
No Yes Burkholderia phenoliruptrix BR3459a   1 1
No Yes Ralstonia pickettii 12J   1 1
No Yes Ralstonia solanacearum FQY_4   1 1
No Yes Ralstonia solanacearum Po82   1 1
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Ralstonia solanacearum CMR15   1 1
No Yes Ralstonia solanacearum GMI1000   1 1
No Yes Burkholderia sp. YI23   1 1
No Yes Burkholderia sp. CCGE1001   1 1
No Yes Burkholderia sp. KJ006   2 2
No Yes Burkholderia thailandensis MSMB121   1 1
No Yes Burkholderia pseudomallei MSHR305   1 1
No Yes Burkholderia pseudomallei NCTC 13179   1 1
No Yes Burkholderia pseudomallei BPC006   1 1
No Yes Burkholderia pseudomallei 1026b   1 1
No Yes Burkholderia pseudomallei 668   1 1
No Yes Burkholderia pseudomallei 1710b   1 1
No Yes Burkholderia pseudomallei K96243   1 1
No Yes Burkholderia mallei NCTC 10229   1 1
No Yes Burkholderia mallei NCTC 10247   1 1
No Yes Burkholderia mallei ATCC 23344   1 1
No Yes Burkholderia lata   3 3
No Yes Burkholderia ambifaria MC40-6   2 2
No Yes Burkholderia cenocepacia MC0-3   2 2
No Yes Burkholderia cenocepacia AU 1054   2 2
No Yes Burkholderia cenocepacia J2315   2 2
No Yes Burkholderia multivorans ATCC 17616   2 2
No Yes Burkholderia cepacia GG4   1 1
No Yes Variovorax paradoxus B4   1 1
No Yes Variovorax paradoxus EPS   1 1
No Yes Bordetella bronchiseptica MO149   1 1
No Yes Bordetella bronchiseptica 253   1 1
No Yes Zymomonas mobilis subsp. mobilis ZM4   1 1
No Yes Gluconacetobacter diazotrophicus PAl 5   1 1
No Yes Sinorhizobium fredii USDA 257   2 2
No Yes Rhizobium etli bv. mimosae str. Mim1   1 1
No Yes Rhizobium tropici CIAT 899   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   2 2
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Hyphomicrobium denitrificans 1NES1   1 1
No Yes Bradyrhizobium sp. BTAi1   1 1
No Yes Bradyrhizobium japonicum USDA 6   5 5
No Yes Vibrio nigripulchritudo VibrioScope   1 1
No Yes Shewanella sp. ANA-3   1 1
No Yes Shewanella baltica BA175   1 1
No Yes Shewanella baltica OS678   1 1
No Yes Shewanella baltica OS117   1 1
No Yes Shewanella baltica OS223   1 1
No Yes Shewanella baltica OS195   1 1
No Yes Shewanella baltica OS155   1 1
No Yes Shewanella sp. MR-7   1 1
No Yes Glaciecola psychrophila 170   1 1
No Yes Legionella pneumophila str. Paris   1 1
No Yes Legionella pneumophila str. Lens   1 1
No Yes Legionella pneumophila subsp. pneumophila LPE509   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   1 1
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila   1 1
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   1 1
No Yes Legionella pneumophila 2300/99 Alcoy   1 1
No Yes Pseudomonas putida DOT-T1E   1 1
No Yes Pseudomonas putida KT2440   1 1
No Yes Pseudomonas fluorescens A506   1 1
No Yes Pseudomonas aeruginosa PA7   1 1
No Yes Acinetobacter genomosp. 13TU RUH2624   1 1
No Yes Acinetobacter sp. SH024   1 1
No Yes Acinetobacter calcoaceticus ruh2202   1 1
No Yes Acinetobacter baumannii ZW85-1   1 1
No Yes Acinetobacter baumannii TYTH-1   2 2
No Yes Acinetobacter baumannii BJAB0868   2 2
No Yes Acinetobacter baumannii BJAB0715   1 1
No Yes Acinetobacter baumannii BJAB07104   2 2
No Yes Acinetobacter baumannii TCDC-AB0715   2 2
No Yes Acinetobacter baumannii D1279779   1 1
No Yes Acinetobacter baumannii MDR-TJ   2 2
No Yes Acinetobacter baumannii 1656-2   2 2
No Yes Acinetobacter baumannii ATCC 19606   1 1
No Yes Acinetobacter baumannii AB307-0294   2 2
No Yes Acinetobacter baumannii AYE   2 2
No Yes Acinetobacter baumannii MDR-ZJ06   2 2
No Yes Acinetobacter baumannii AB0057   2 2
No Yes Acinetobacter baumannii ACICU   2 2
No Yes Acinetobacter radioresistens SH164   1 1
No Yes Acinetobacter johnsonii SH046   1 1
No Yes Acinetobacter lwoffii SH145   1 1
No Yes Francisella tularensis subsp. holarctica F92   1 1
No Yes Francisella tularensis subsp. holarctica OSU18   1 1
No Yes Francisella tularensis subsp. holarctica LVS   1 1
No Yes Francisella tularensis subsp. tularensis NE061598   1 1
No Yes Francisella cf. novicida Fx1   1 1
No Yes Sulfolobus islandicus REY15A   1 1
No Yes Sulfolobus islandicus HVE10/4   1 1
No Yes Sulfolobus islandicus Y.G.57.14   1 1
No Yes Sulfolobus islandicus L.S.2.15   2 2
No Yes Sulfolobus islandicus M.16.27   1 1
No Yes Sulfolobus islandicus M.14.25   1 1
No Yes Sulfolobus islandicus M.16.4   3 3
No Yes Sulfolobus islandicus L.D.8.5   2 2
No Yes Sulfolobus acidocaldarius SUSAZ   1 1
No Yes Sulfolobus acidocaldarius Ron12/I   1 1
No Yes Sulfolobus acidocaldarius N8   1 1
No Yes Archaeoglobus sulfaticallidus PM70-1   1 1
No Yes Halovivax ruber XH-70   2 2
No Yes Natrinema pellirubrum DSM 15624   3 3
No Yes Natronococcus occultus SP4   3 3
No Yes Haloquadratum walsbyi C23   1 1
No Yes Halorhabdus tiamatea SARL4B   1 1
No Yes Natronomonas moolapensis 8.8.11   1 1
No Yes Haloarcula hispanica N601   2 2
No Yes Moniliophthora perniciosa FA553 (Genome survey)   1 1
No Yes Malus x domestica (Duplicate) Apple 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   3 3
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Mycobacterium tuberculosis H37Rv (Duplicate of ex)   1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 2_050719S (meta-genome)   2 2
No Yes 3_050719R (meta-genome)   5 5
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   3 3
No Yes 4_Deep_abyss (meta-genome)   2 2
No Yes 5_050719P (meta-genome)   3 3
No Yes 7_Oxygen_minimum_layer (meta-genome)   2 2
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   2 2
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Combined (meta-genome)   3 3
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   4 4
No Yes Dump bottom (Dump bottom) (meta-genome)   15 15
No Yes Dump top (Dump top) (meta-genome)   11 11
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   3 3
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome)   1 1
No Yes Hot Spring microbial communities from Yellowstone Obsidian Hot Spring, Sample 10594 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   3 3
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   4 4
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   7 7
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   24 24
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   7 7
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   5 5
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   7 7
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   2 2
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   4 4
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   5 5
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   2 2
No Yes NCBI 2017_08 genome   24534 24529
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   11 11
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   5 5
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   2 2
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   7 7
No Yes Sludge/US, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   8 8
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   20 20
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   30 30
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   25 25
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   25 25
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   26 26
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   32 32
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   8 8
No Yes STRING v9.0.5 (STRING)   307 305
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   5 5
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   18 18
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   4 4
No Yes Uniprot 2018_03 genome   8325 8317
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   3 3
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   9 9
No Yes Global Ocean Sampling Expedition (GOS)   193 193
No Yes NCBI plasmid sequences (Plasmids)   29 29
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   40 40
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   88 88
No Yes TargetDB (Targets)   49 49

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]