SUPERFAMILY 1.75 HMM library and genome assignments server

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MAPEG domain-like superfamily domain assignments
in
Catenulispora acidiphila DSM 44928


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Select to display   Genome       Domains   Proteins
No Yes ALL   77146 77146
No Yes Homo sapiens 76_38 Human 22 22
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 6 6
No Yes Gorilla gorilla 76_3.1 Western gorilla 7 7
No Yes Pongo abelii 76_2 Sumatran orangutan 6 6
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 6 6
No Yes Papio anubis 76 Olive baboon 6 6
No Yes Macaca mulatta 76_1 Rhesus monkey 7 7
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 10 10
No Yes Otolemur garnettii 76_3 Small-eared galago 7 7
No Yes Microcebus murinus 76_1 Gray mouse lemur 5 5
No Yes Rattus norvegicus 76_5.0 Norway rat 7 7
No Yes Mus musculus 76_38 House mouse 14 14
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 4 4
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 6 6
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 5 5
No Yes Cavia porcellus 76_3 Domestic guinea pig 6 6
No Yes Oryctolagus cuniculus 76_2 Rabbit 7 7
No Yes Ochotona princeps 76 American pika 6 5
No Yes Tupaia belangeri 76 Northern tree shrew 4 4
No Yes Sus scrofa 76_10.2 Pig 7 7
No Yes Bos taurus 76_3.1 Cattle 6 6
No Yes Ovis aries 76_3.1 Sheep 6 6
No Yes Vicugna pacos 76_1 Alpaca 3 3
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 6 6
No Yes Mustela putorius furo 76_1.0 Domestic ferret 6 6
No Yes Ailuropoda melanoleuca 76_1 Giant panda 6 6
No Yes Canis familiaris 76_3.1 Dog 8 8
No Yes Felis catus 76_6.2 Domestic cat 6 6
No Yes Equus caballus 76_2 Horse 6 6
No Yes Myotis lucifugus 76_2.0 Little brown bat 5 5
No Yes Pteropus vampyrus 76_1 Large flying fox 5 5
No Yes Sorex araneus 76_1 European shrew 3 3
No Yes Erinaceus europaeus 76 Western European hedgehog 3 3
No Yes Procavia capensis 76_1 Cape rock hyrax 6 6
No Yes Loxodonta africana 76_3 African savanna elephant 7 7
No Yes Echinops telfairi 76 Small Madagascar hedgehog 5 5
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 9 9
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 4 4
No Yes Macropus eugenii 76_1.0 Tammar wallaby 5 5
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 5 5
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 6 6
No Yes Ornithorhynchus anatinus 76_5 Platypus 5 5
No Yes Saccoglossus kowalevskii v3.0   15 15
No Yes Petromyzon marinus 76_7.0 Sea lamprey 3 3
No Yes Meleagris gallopavo 76_2 Turkey 7 7
No Yes Gallus gallus 76_4 Chicken 8 8
No Yes Anas platyrhynchos 76_1.0 Mallard 7 7
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 7 7
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 6 6
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 8 8
No Yes Anolis carolinensis 76_2.0 Green anole 6 6
No Yes Xenopus laevis African clawed frog 13 13
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 7 7
No Yes Latimeria chalumnae 76_1 Coelacanth 10 10
No Yes Lepisosteus oculatus 76 Spotted gar 9 9
No Yes Gadus morhua 76_1 Atlantic cod 9 9
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 6 6
No Yes Takifugu rubripes 76_4 Torafugu 12 12
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 11 11
No Yes Oryzias latipes 76_1 Japanese medaka 6 6
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 7 7
No Yes Poecilia formosa 76 Amazon molly 7 7
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 8 8
No Yes Astyanax mexicanus 76 Mexican tetra 8 8
No Yes Danio rerio 76_9 Zebrafish 16 16
No Yes Oikopleura dioica   3 3
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 4 4
No Yes Ciona intestinalis 76 Vase tunicate 3 3
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 18 17
No Yes Adineta vaga   22 22
No Yes Octopus bimaculoides 280   1 1
No Yes Crassostrea gigas 22 Pacific oyster 8 7
No Yes Lottia gigantea Owl limpet 8 8
No Yes Helobdella robusta   3 3
No Yes Capitella sp. I   8 8
No Yes Danaus plexippus OGS1.0 Monarch butterfly 2 1
No Yes Heliconius melpomene Postman butterfly 3 1
No Yes Bombyx mori Domestic silkworm 2 1
No Yes Nasonia vitripennis Jewel wasp 1 1
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 5 5
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 2 2
No Yes Linepithema humile v1.1 Argentine ant 2 2
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 2 2
No Yes Solenopsis invicta v.2.2.3 Red fire ant 2 2
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 3 3
No Yes Atta cephalotes v1.1   2 2
No Yes Camponotus floridanus v3.3 Florida carpenter ant 2 2
No Yes Lucilia cuprina Australian sheep blowfly 4 2
No Yes Drosophila grimshawi 1.3   3 3
No Yes Drosophila willistoni 1.3   2 2
No Yes Drosophila pseudoobscura 2.13   3 3
No Yes Drosophila persimilis 1.3   3 3
No Yes Drosophila suzukii   3 2
No Yes Drosophila yakuba 1.3   3 3
No Yes Drosophila simulans 1.3   3 3
No Yes Drosophila sechellia 1.3   3 3
No Yes Drosophila melanogaster 76_5 Fruit fly 4 4
No Yes Drosophila erecta 1.3   3 3
No Yes Drosophila ananassae 1.3   3 3
No Yes Drosophila virilis 1.2   3 3
No Yes Drosophila mojavensis 1.3   3 3
No Yes Megaselia scalaris 22   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 3 3
No Yes Culex pipiens quinquefasciatus Southern house mosquito 5 5
No Yes Anopheles darlingi 22 American malaria mosquito 3 3
No Yes Anopheles gambiae 49_3j African malaria mosquito 3 3
No Yes Tribolium castaneum 3.0 Red flour beetle 4 3
No Yes Pediculus humanus corporis (Early assembly) Human body louse 2 2
No Yes Acyrthosiphon pisum Pea aphid 2 2
No Yes Rhodnius prolixus 22   1 1
No Yes Daphnia pulex Common water flea 5 5
No Yes Strigamia maritima 22   1 1
No Yes Sarcoptes scabiei   1 1
No Yes Tetranychus urticae Two-spotted spider mite 1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 1 1
No Yes Hymenolepis microstoma   2 2
No Yes Echinococcus multilocularis   1 1
No Yes Echinococcus granulosus   1 1
No Yes Taenia solium Pork tapeworm 1 1
No Yes Schistosoma mansoni   2 2
No Yes Mnemiopsis leidyi Sea walnut 2 1
No Yes Acropora digitifera v1.0   3 3
No Yes Nematostella vectensis 1.0 Starlet sea anemone 9 9
No Yes Hydra vulgaris   2 2
No Yes Amphimedon queenslandica   3 3
No Yes Trichoplax adhaerens   6 6
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   3 3
No Yes Sphaeroforma arctica JP610   3 3
No Yes Capsaspora owczarzaki ATCC 30864   2 2
No Yes Conidiobolus coronatus NRRL28638 v1.0   9 9
No Yes Mortierella verticillata NRRL 6337   3 3
No Yes Phycomyces blakesleeanus   2 2
No Yes Rhizopus oryzae RA 99-880   2 2
No Yes Mucor circinelloides   3 3
No Yes Rhizomucor miehei CAU432   3 3
No Yes Malassezia globosa CBS 7966   4 4
No Yes Sporisorium reilianum 22   5 5
No Yes Ustilago maydis   7 7
No Yes Mixia osmundae IAM 14324 v1.0   3 3
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   2 2
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   2 1
No Yes Melampsora laricis-populina   2 2
No Yes Rhodotorula graminis WP1 v1.0   3 3
No Yes Sporobolomyces roseus IAM 13481   3 3
No Yes Microbotryum violaceum 22   5 5
No Yes Wallemia sebi v1.0   2 2
No Yes Sphaerobolus stellatus v1.0   3 3
No Yes Piloderma croceum F 1598 v1.0   3 3
No Yes Serpula lacrymans var. lacrymans S7.9   3 3
No Yes Coniophora puteana   4 4
No Yes Hydnomerulius pinastri v2.0   4 4
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   2 2
No Yes Pisolithus microcarpus 441 v1.0   2 2
No Yes Pisolithus tinctorius Marx 270 v1.0   1 1
No Yes Scleroderma citrinum Foug A v1.0   2 2
No Yes Coprinopsis cinerea okayama7 130 v3   4 4
No Yes Pleurotus ostreatus Oyster mushroom 4 4
No Yes Amanita thiersii Skay4041 v1.0   3 3
No Yes Amanita muscaria Koide v1.0 Fly agaric 4 4
No Yes Galerina marginata v1.0   7 7
No Yes Hebeloma cylindrosporum h7 v2.0   4 4
No Yes Laccaria bicolor S238N-H82   2 2
No Yes Agaricus bisporus var. bisporus   3 3
No Yes Schizophyllum commune   1 1
No Yes Stereum hirsutum FP-91666 SS1 v1.0   4 4
No Yes Heterobasidion annosum   1 1
No Yes Gloeophyllum trabeumv1.0   5 5
No Yes Punctularia strigosozonata v1.0   4 4
No Yes Sebacina vermifera MAFF 305830 v1.0   3 3
No Yes Fomitiporia mediterranea v1.0   4 4
No Yes Tulasnella calospora AL13/4D v1.0   7 7
No Yes Postia placenta   2 2
No Yes Wolfiporia cocos MD-104 SS10 v1.0   1 1
No Yes Fomitopsis pinicolav1.0   1 1
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   1 1
No Yes Phanerochaete chrysosporium RP-78 2.1   3 3
No Yes Dichomitus squalens   1 1
No Yes Trametes versicolor v1.0   1 1
No Yes Tremella mesenterica Witches' butter 3 3
No Yes Daldinia eschscholzii EC12 v1.0   4 4
No Yes Apiospora montagnei NRRL 25634 v1.0   6 6
No Yes Magnaporthe poae ATCC 64411 22   2 2
No Yes Magnaporthe grisea 70-15   1 1
No Yes Podospora anserina   4 4
No Yes Sporotrichum thermophile ATCC 42464   2 2
No Yes Thielavia terrestris NRRL 8126   1 1
No Yes Chaetomium globosum CBS 148.51   1 1
No Yes Neurospora tetrasperma   4 4
No Yes Neurospora discreta FGSC 8579   1 1
No Yes Neurospora crassa OR74A   4 4
No Yes Cryphonectria parasitica Chestnut blight fungus 3 3
No Yes Verticillium albo-atrum VaMs.102   1 1
No Yes Verticillium dahliae VdLs.17   1 1
No Yes Acremonium alcalophilumv 1.0   1 1
No Yes Glomerella graminicola 22   4 4
No Yes Fusarium graminearum   3 3
No Yes Nectria haematococca mpVI   2 2
No Yes Fusarium oxysporum f. sp. lycopersici 4286   4 4
No Yes Fusarium verticillioides 7600   2 2
No Yes Trichoderma asperellum CBS 433.97 v1.0   2 2
No Yes Trichoderma atroviride   2 2
No Yes Trichoderma citrinoviride v1.0   2 2
No Yes Trichoderma reesei 1.2   1 1
No Yes Trichoderma virens Gv29-8   2 2
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   1 1
No Yes Trichoderma harzianum CBS 226.95 v1.0   2 2
No Yes Amorphotheca resinae v1.0 Creosote fungus 2 2
No Yes Botrytis cinerea B05.10   3 3
No Yes Sclerotinia sclerotiorum   4 4
No Yes Blumeria graminis 22   1 1
No Yes Didymella exigua CBS 183.55 v1.0   6 6
No Yes Leptosphaeria maculans 22   4 4
No Yes Setosphaeria turcica v1.0   6 6
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   5 5
No Yes Cochliobolus victoriae FI3 v1.0   6 6
No Yes Cochliobolus carbonum 26-R-13 v1.0   6 6
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 6 6
No Yes Alternaria brassicicola   4 4
No Yes Cochliobolus lunatus m118 v2.0   6 6
No Yes Pyrenophora teres f. teres 22   4 4
No Yes Pyrenophora tritici-repentis   6 6
No Yes Stagonospora nodorum   5 5
No Yes Mycosphaerella graminicola IPO323   7 7
No Yes Zasmidium cellare ATCC 36951 v1.0   9 9
No Yes Dothistroma septosporum   12 12
No Yes Septoria musiva v1.0   7 7
No Yes Mycosphaerella fijiensis CIRAD86   5 5
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   4 4
No Yes Paracoccidioides brasiliensis Pb18   3 3
No Yes Coccidioides posadasii RMSCC 3488   2 2
No Yes Coccidioides immitis RS   2 2
No Yes Ajellomyces dermatitidis SLH14081   3 3
No Yes Histoplasma capsulatum class NAmI strain WU24   3 3
No Yes Microsporum canis CBS 113480   2 2
No Yes Trichophyton equinum CBS 127.97   2 2
No Yes Trichophyton verrucosum HKI 0517   2 2
No Yes Arthroderma benhamiae CBS 112371   2 2
No Yes Trichophyton tonsurans CBS 112818   2 2
No Yes Trichophyton rubrum CBS 118892   2 2
No Yes Uncinocarpus reesii 1704   1 1
No Yes Aspergillus zonatus v1.0   1 1
No Yes Penicillium chrysogenum Wisconsin 54-1255   3 3
No Yes Penicillium chrysogenum v1.0   3 3
No Yes Aspergillus acidus v1.0   2 2
No Yes Aspergillus fumigatus Af293   1 1
No Yes Aspergillus brasiliensis v1.0   2 2
No Yes Aspergillus nidulans FGSC A4   5 5
No Yes Aspergillus sydowii v1.0   5 5
No Yes Aspergillus versicolor v1.0   5 5
No Yes Aspergillus glaucus   2 2
No Yes Aspergillus carbonarius ITEM 5010   2 2
No Yes Neosartorya fischeri NRRL 181   2 2
No Yes Aspergillus terreus NIH2624   5 5
No Yes Aspergillus tubingensis v1.0   2 2
No Yes Aspergillus wentii v1.0   3 3
No Yes Aspergillus oryzae RIB40   3 3
No Yes Aspergillus niger 22   3 3
No Yes Aspergillus niger ATCC 1015   2 2
No Yes Aspergillus flavus NRRL3357   3 3
No Yes Aspergillus clavatus NRRL 1   2 2
No Yes Penicillium marneffei ATCC 18224   3 3
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Yarrowia lipolytica CLIB122   2 2
No Yes Catenaria anguillulae PL171 v1.0   4 4
No Yes Allomyces macrogynus ATCC 38327   11 11
No Yes Spizellomyces punctatus DAOM BR117   4 4
No Yes Dictyostelium discoideum   5 5
No Yes Dictyostelium purpureum   2 2
No Yes Selaginella moellendorffii   4 4
No Yes Pinus taeda Loblolly pine 3 3
No Yes Picea abies Norway spruce 1 1
No Yes Eucalyptus grandis v201 Rose gum 1 1
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221   2 2
No Yes Citrus clementina v165   2 2
No Yes Citrus sinensis v154 Sweet orange 1 1
No Yes Thellungiella halophila v173   1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 3 3
No Yes Capsella rubella v183   2 2
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 3 3
No Yes Carica papaya Papaya 1 1
No Yes Medicago truncatula Barrel medic 2 2
No Yes Cucumis sativus v122 Cucumber 1 1
No Yes Fragaria vesca Wild strawberry 1 1
No Yes Malus domestica v196 Apple 6 6
No Yes Prunus persica v139 Peach 1 1
No Yes Linum usitatissimum v200 Flax 4 4
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 2 2
No Yes Vitis vinifera Wine grape 2 2
No Yes Mimulus guttatus v140 Spotted monkey flower 2 2
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 1 1
No Yes Actinidia chinensis Hongyang   2 2
No Yes Aquilegia coerulea v195   4 4
No Yes Triticum urartu 22   3 3
No Yes Triticum aestivum 22 Bread wheat 7 7
No Yes Aegilops tauschii 22   3 3
No Yes Brachypodium distachyon Stiff brome 3 3
No Yes Oryza barthii 22 African wild rice 1 1
No Yes Oryza meridionalis 22   1 1
No Yes Oryza glumaepatula 22   1 1
No Yes Oryza glaberrima African rice 1 1
No Yes Oryza punctata 22   1 1
No Yes Oryza nivara 22   1 1
No Yes Oryza brachyantha 22 Malo sina 1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 1 1
No Yes Oryza sativa v193 Rice 1 1
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 3 3
No Yes Panicum virgatum v202 Switchgrass 4 4
No Yes Setaria italica v164 Foxtail millet 5 5
No Yes Zea mays subsp. mays Maize 2 2
No Yes Zea mays v181 Maize 2 2
No Yes Sorghum bicolor Sorghum 2 2
No Yes Musa balbisiana Balbis banana 2 2
No Yes Musa acuminata 22 Wild Malaysian banana 2 2
No Yes Amborella trichopoda 22   1 1
No Yes Physcomitrella patens   4 4
No Yes Coccomyxa subellipsoidea sp. C-169 v2   4 4
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Chlorella variabilis sp. NC64A   3 3
No Yes Chlorella vulgaris   4 4
No Yes Volvox carteri f. nagariensis   2 2
No Yes Volvox carteri v199   2 2
No Yes Chlamydomonas reinhardtii 4.0   2 2
No Yes Ostreococcus sp. RCC809   2 2
No Yes Ostreococcus lucimarinus CCE9901   1 1
No Yes Ostreococcus tauri   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Micromonas sp. RCC299   2 2
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Cyanidioschyzon merolae strain 10D 22   1 1
No Yes Cyanidioschyzon merolae   1 1
No Yes Porphyridium purpureum 02_2012   1 1
No Yes Thecamonas trahens ATCC 50062   2 2
No Yes Bigelowiella natans CCMP2755 22   10 10
No Yes Cyanophora paradoxa   3 3
No Yes Ectocarpus siliculosus   7 7
No Yes Aureococcus anophagefferens   5 5
No Yes Albugo laibachii 22   1 1
No Yes Pythium iwayamai DAOM BR242034 22   12 11
No Yes Pythium arrhenomanes ATCC 12531 22   12 12
No Yes Pythium ultimum v1.7-2   13 12
No Yes Pythium aphanidermatum DAOM BR444 22   14 14
No Yes Pythium irregulare DAOM BR486 22   11 11
No Yes Pythium vexans DAOM BR484 22   4 3
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 10 9
No Yes Phytophthora sojae 1.1   14 13
No Yes Phytophthora infestans T30-4   8 8
No Yes Phytophthora capsici   10 9
No Yes Hyaloperonospora arabidopsidis 22   6 6
No Yes Phaeodactylum tricornutumCCAP 1055/1   3 3
No Yes Fragilariopsis cylindrus   8 8
No Yes Thalassiosira pseudonana CCMP1335   5 5
No Yes Perkinsus marinus ATCC 50983   4 4
No Yes Tetrahymena thermophila SB210 1   6 6
No Yes Ichthyophthirius multifiliis strain G5   2 2
No Yes Neospora caninum   1 1
No Yes Toxoplasma gondii VEG   1 1
No Yes Toxoplasma gondii ME49   1 1
No Yes Toxoplasma gondii GT1   1 1
No Yes Symbiodinium minutum clade B1 v1.2   10 10
No Yes Naegleria gruberi   11 11
No Yes Guillardia theta CCMP2712 v1.0   4 4
No Yes Emiliania huxleyi CCMP1516   17 16
No Yes Leptolyngbya sp. PCC 7376   2 2
No Yes Pseudanabaena sp. PCC 7367   1 1
No Yes Acaryochloris marina MBIC11017   8 8
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Thermosynechococcus sp. NK55   1 1
No Yes Thermosynechococcus elongatus BP-1   1 1
No Yes Synechococcus sp. PCC 7502   2 2
No Yes Synechococcus sp. PCC 6312   1 1
No Yes Synechococcus sp. CC9311   1 1
No Yes Synechococcus elongatus PCC 7942   2 2
No Yes Prochlorococcus marinus str. MIT 9515   1 1
No Yes Microcoleus sp. PCC 7113   3 3
No Yes Trichodesmium erythraeum IMS101   1 1
No Yes Geitlerinema sp. PCC 7407   2 2
No Yes Cyanothece sp. PCC 8802   2 2
No Yes Gloeocapsa sp. PCC 7428   2 2
No Yes Halothece sp. PCC 7418   1 1
No Yes Microcystis aeruginosa NIES-843   1 1
No Yes Gloeobacter violaceus PCC 7421   2 2
No Yes Rivularia sp. PCC 7116   2 2
No Yes Calothrix sp. PCC 7507   1 1
No Yes Anabaena variabilis ATCC 29413   1 1
No Yes Nostoc sp. PCC 7107   2 2
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Nostoc sp. PCC 7120   3 3
No Yes Nostoc sp. PCC 7524   1 1
No Yes Anabaena sp. 90   2 2
No Yes Frankia sp. EAN1pec   1 1
No Yes Isosphaera pallida ATCC 43644   1 1
No Yes Turneriella parva DSM 21527   1 1
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. L550   1 1
No Yes Leptospira interrogans serovar Lai str. IPAV   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'   2 2
No Yes Bacteriovorax marinus SJ   1 1
No Yes Haliangium ochraceum DSM 14365   2 2
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Corallococcus coralloides DSM 2259   1 1
No Yes Chromobacterium violaceum ATCC 12472   2 2
No Yes Neisseria meningitidis alpha14   1 1
No Yes Neisseria meningitidis FAM18   1 1
No Yes Neisseria lactamica 020-06   1 1
No Yes Neisseria gonorrhoeae NCCP11945   1 1
No Yes Candidatus Accumulibacter phosphatis clade IIA str. UW-1   2 2
No Yes beta proteobacterium CB   1 1
No Yes Methylibium petroleiphilum PM1   2 2
No Yes Thiomonas arsenitoxydans   1 1
No Yes Thiomonas intermedia K12   1 1
No Yes Rubrivivax gelatinosus IL144   1 1
No Yes Burkholderia phytofirmans PsJN   1 1
No Yes Ralstonia eutropha JMP134   1 1
No Yes Cupriavidus taiwanensis LMG 19424   1 1
No Yes Cupriavidus metallidurans CH34   1 1
No Yes Cupriavidus necator N-1   1 1
No Yes Ralstonia eutropha H16   2 2
No Yes Ralstonia pickettii 12D   1 1
No Yes Ralstonia solanacearum CFBP2957   1 1
No Yes Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1   3 3
No Yes Burkholderia sp. RPE64   1 1
No Yes Burkholderia thailandensis E264   1 1
No Yes Burkholderia pseudomallei 1106a   1 1
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Burkholderia cenocepacia HI2424   2 2
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia vietnamiensis G4   2 2
No Yes Burkholderia gladioli BSR3   1 1
No Yes Burkholderia glumae BGR1   1 1
No Yes Verminephrobacter eiseniae EF01-2   1 1
No Yes Alicycliphilus denitrificans K601   1 1
No Yes Ramlibacter tataouinensis TTB310   1 1
No Yes Delftia sp. Cs1-4   1 1
No Yes Delftia acidovorans SPH-1   1 1
No Yes Polaromonas sp. JS666   1 1
No Yes Variovorax paradoxus S110   1 1
No Yes Acidovorax ebreus TPSY   1 1
No Yes Acidovorax sp. KKS102   1 1
No Yes Acidovorax sp. JS42   1 1
No Yes Acidovorax citrulli AAC00-1   1 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860   1 1
No Yes Herminiimonas arsenicoxydans   1 1
No Yes Collimonas fungivorans Ter331   1 1
No Yes Janthinobacterium sp. Marseille   1 1
No Yes Herbaspirillum seropedicae SmR1   1 1
No Yes Bordetella avium 197N   1 1
No Yes Bordetella pertussis Tohama I   1 1
No Yes Bordetella parapertussis 12822   1 1
No Yes Bordetella bronchiseptica RB50   1 1
No Yes Achromobacter xylosoxidans A8   1 1
No Yes Achromobacter xylosoxidans   1 1
No Yes Nitrosomonas eutropha C91   1 1
No Yes Methylotenera versatilis 301   1 1
No Yes Parvularcula bermudensis HTCC2503   3 3
No Yes Asticcacaulis excentricus CB 48   4 4
No Yes Brevundimonas subvibrioides ATCC 15264   2 2
No Yes Caulobacter sp. K31   4 4
No Yes Caulobacter crescentus NA1000   4 4
No Yes Caulobacter segnis ATCC 21756   4 4
No Yes Phenylobacterium zucineum HLK1   4 4
No Yes Erythrobacter litoralis HTCC2594   3 3
No Yes Sphingopyxis alaskensis RB2256   4 4
No Yes Novosphingobium sp. PP1Y   2 2
No Yes Novosphingobium aromaticivorans DSM 12444   3 3
No Yes Sphingobium sp. SYK-6   2 2
No Yes Sphingobium japonicum UT26S   2 2
No Yes Sphingobium chlorophenolicum L-1   2 2
No Yes Sphingomonas sp. MM-1   1 1
No Yes Sphingomonas wittichii RW1   2 2
No Yes Zymomonas mobilis subsp. mobilis NCIMB 11163   1 1
No Yes Maricaulis maris MCS10   3 3
No Yes Hirschia baltica ATCC 49814   1 1
No Yes Hyphomonas neptunium ATCC 15444   3 3
No Yes Dinoroseobacter shibae DFL 12   1 1
No Yes Phaeobacter gallaeciensis 2.10   1 1
No Yes Pseudovibrio sp. FO-BEG1   3 3
No Yes Jannaschia sp. CCS1   4 4
No Yes Ruegeria sp. TM1040   2 2
No Yes Ruegeria pomeroyi DSS-3   3 3
No Yes Ketogulonicigenium vulgare Y25   1 1
No Yes Ketogulonigenium vulgarum WSH-001   1 1
No Yes Roseobacter litoralis Och 149   2 2
No Yes Roseobacter denitrificans OCh 114   2 2
No Yes Rhodobacter sphaeroides ATCC 17029   1 1
No Yes Paracoccus denitrificans PD1222   1 1
No Yes Magnetospirillum magneticum AMB-1   1 1
No Yes Rhodospirillum centenum SW   2 2
No Yes Azospirillum lipoferum 4B   1 1
No Yes Azospirillum sp. B510   1 1
No Yes Azospirillum brasilense Sp245   1 1
No Yes Gluconacetobacter diazotrophicus PAl 5   1 1
No Yes Acidiphilium multivorum AIU301   1 1
No Yes Acidiphilium cryptum JF-5   1 1
No Yes Gluconobacter oxydans 621H   1 1
No Yes Polymorphum gilvum SL003B-26A1   1 1
No Yes Candidatus Pelagibacter sp. IMCC9063   1 1
No Yes Starkeya novella DSM 506   2 2
No Yes Azorhizobium caulinodans ORS 571   2 2
No Yes Methylobacterium chloromethanicum CM4   1 1
No Yes Methylobacterium extorquens AM1   1 1
No Yes Methylobacterium sp. 4-46   1 1
No Yes Methylobacterium populi BJ001   1 1
No Yes Methylobacterium radiotolerans JCM 2831   1 1
No Yes Parvibaculum lavamentivorans DS-1   4 4
No Yes Ochrobactrum anthropi ATCC 49188   1 1
No Yes Brucella microti CCM 4915   1 1
No Yes Brucella pinnipedialis B2/94   1 1
No Yes Brucella canis ATCC 23365   1 1
No Yes Brucella suis ATCC 23445   1 1
No Yes Brucella melitensis ATCC 23457   1 1
No Yes Brucella abortus S19   1 1
No Yes Sinorhizobium fredii NGR234   1 1
No Yes Sinorhizobium medicae WSM419   1 1
No Yes Sinorhizobium meliloti AK83   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   2 2
No Yes Rhizobium etli CIAT 652   1 1
No Yes Rhizobium leguminosarum bv. viciae 3841   1 1
No Yes Agrobacterium tumefaciens str. C58   2 2
No Yes Agrobacterium radiobacter K84   1 1
No Yes Agrobacterium sp. H13-3   2 2
No Yes Agrobacterium vitis S4   2 2
No Yes Mesorhizobium opportunistum WSM2075   3 3
No Yes Mesorhizobium ciceri biovar biserrulae WSM1271   3 3
No Yes Mesorhizobium loti MAFF303099   1 1
No Yes Methylocella silvestris BL2   2 2
No Yes Beijerinckia indica subsp. indica ATCC 9039   2 2
No Yes Pelagibacterium halotolerans B2   3 3
No Yes Rhodomicrobium vannielii ATCC 17100   1 1
No Yes Hyphomicrobium sp. MC1   2 2
No Yes Hyphomicrobium denitrificans ATCC 51888   1 1
No Yes Oligotropha carboxidovorans OM4   2 2
No Yes Rhodopseudomonas palustris BisA53   3 3
No Yes Nitrobacter winogradskyi Nb-255   1 1
No Yes Nitrobacter hamburgensis X14   3 3
No Yes Bradyrhizobium japonicum USDA 110   5 5
No Yes Bradyrhizobium sp. ORS 278   4 4
No Yes Methylocystis sp. SC2   2 2
No Yes Saccharophagus degradans 2-40   1 1
No Yes Teredinibacter turnerae T7901   2 2
No Yes Cellvibrio japonicus Ueda107   1 1
No Yes Aeromonas veronii B565   2 2
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Vibrio sp. Ex25   1 1
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Vibrio parahaemolyticus RIMD 2210633   1 1
No Yes Vibrio splendidus LGP32   1 1
No Yes Vibrio anguillarum 775   1 1
No Yes Vibrio furnissii NCTC 11218   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Psychromonas ingrahamii 37   1 1
No Yes Psychromonas sp. CNPT3   1 1
No Yes Idiomarina loihiensis L2TR   3 3
No Yes Ferrimonas balearica DSM 9799   3 3
No Yes Shewanella piezotolerans WP3   4 4
No Yes Shewanella loihica PV-4   2 2
No Yes Shewanella halifaxensis HAW-EB4   2 2
No Yes Shewanella sediminis HAW-EB3   2 2
No Yes Shewanella denitrificans OS217   2 2
No Yes Shewanella pealeana ATCC 700345   2 2
No Yes Shewanella oneidensis MR-1   2 2
No Yes Shewanella baltica OS185   2 2
No Yes Shewanella woodyi ATCC 51908   3 3
No Yes Shewanella sp. MR-4   2 2
No Yes Shewanella amazonensis SB2B   2 2
No Yes Shewanella violacea DSS12   2 2
No Yes Shewanella frigidimarina NCIMB 400   2 2
No Yes Shewanella putrefaciens CN-32   2 2
No Yes Colwellia psychrerythraea 34H   1 1
No Yes Pseudoalteromonas sp. SM9913   4 4
No Yes Pseudoalteromonas atlantica T6c   3 3
No Yes Pseudoalteromonas haloplanktis TAC125   4 4
No Yes Glaciecola sp. 4H-3-7+YE-5   3 3
No Yes Glaciecola nitratireducens FR1064   5 5
No Yes Marinobacter adhaerens HP15   1 1
No Yes Marinobacter sp. BSs20148   1 1
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840   1 1
No Yes Marinobacter aquaeolei VT8   1 1
No Yes Alteromonas sp. SN2   2 2
No Yes Alteromonas macleodii str. 'Deep ecotype'   3 3
No Yes Kangiella koreensis DSM 16069   2 2
No Yes Alcanivorax borkumensis SK2   3 3
No Yes Marinomonas posidonica IVIA-Po-181   3 3
No Yes Marinomonas sp. MWYL1   1 1
No Yes Marinomonas mediterranea MMB-1   2 2
No Yes Methylomonas methanica MC09   1 1
No Yes Rhodanobacter denitrificans   3 3
No Yes Pseudoxanthomonas spadix BD-a59   2 2
No Yes Pseudoxanthomonas suwonensis 11-1   1 1
No Yes Stenotrophomonas maltophilia K279a   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas albilineans GPE PC73   1 1
No Yes Xanthomonas oryzae pv. oryzae PXO99A   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Spiribacter sp. UAH-SP71   1 1
No Yes Alkalilimnicola ehrlichii MLHE-1   1 1
No Yes Halorhodospira halophila SL1   1 1
No Yes Nitrosococcus watsonii C-113   1 1
No Yes Legionella longbeachae NSW150   1 1
No Yes Legionella pneumophila str. Corby   2 2
No Yes gamma proteobacterium HdN1   1 1
No Yes Photorhabdus asymbiotica   1 1
No Yes Photorhabdus luminescens subsp. laumondii TTO1   1 1
No Yes Xenorhabdus bovienii SS-2004   1 1
No Yes Xenorhabdus nematophila ATCC 19061   1 1
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Proteus mirabilis HI4320   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Edwardsiella tarda EIB202   1 1
No Yes Rahnella sp. Y9602   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia pestis Pestoides F   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   1 1
No Yes Serratia sp. AS12   1 1
No Yes Serratia sp. ATCC 39006   1 1
No Yes Serratia plymuthica AS9   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Dickeya dadantii Ech703   1 1
No Yes Dickeya zeae Ech1591   1 1
No Yes Pectobacterium wasabiae WPP163   1 1
No Yes Pectobacterium sp. SCC3193   1 1
No Yes Pectobacterium atrosepticum SCRI1043   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   1 1
No Yes Sodalis glossinidius str. 'morsitans'   1 1
No Yes Pantoea vagans C9-1   1 1
No Yes Pantoea ananatis LMG 20103   1 1
No Yes Erwinia tasmaniensis Et1/99   1 1
No Yes Erwinia sp. Ejp617   1 1
No Yes Erwinia billingiae Eb661   1 1
No Yes Erwinia pyrifoliae Ep1/96   1 1
No Yes Erwinia amylovora ATCC 49946   1 1
No Yes Escherichia blattae DSM 4481   1 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Cronobacter sakazakii ES15   1 1
No Yes Enterobacteriaceae bacterium strain FGI 57   1 1
No Yes Shigella sonnei Ss046   1 1
No Yes Shigella flexneri 5 str. 8401   1 1
No Yes Shigella dysenteriae Sd197   1 1
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   1 1
No Yes Klebsiella oxytoca E718   1 1
No Yes Klebsiella variicola At-22   1 1
No Yes Klebsiella pneumoniae NTUH-K2044   1 1
No Yes Enterobacter aerogenes KCTC 2190   2 2
No Yes Escherichia fergusonii ATCC 35469   1 1
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   1 1
No Yes Enterobacter sp. R4-368   1 1
No Yes Enterobacter sp. 638   1 1
No Yes Enterobacter asburiae LF7a   1 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   1 1
No Yes Citrobacter rodentium ICC168   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Pseudomonas sp. TKP   1 1
No Yes Pseudomonas sp. UW4   3 3
No Yes Pseudomonas brassicacearum subsp. brassicacearum NFM421   1 1
No Yes Pseudomonas entomophila L48   1 1
No Yes Pseudomonas syringae pv. tomato str. DC3000   1 1
No Yes Pseudomonas fulva 12-X   1 1
No Yes Pseudomonas putida F1   2 2
No Yes Pseudomonas protegens Pf-5   1 1
No Yes Pseudomonas fluorescens SBW25   2 2
No Yes Pseudomonas mendocina ymp   2 2
No Yes Pseudomonas aeruginosa UCBPP-PA14   2 2
No Yes Pseudomonas sp. VLB120   1 1
No Yes Psychrobacter sp. G   1 1
No Yes Psychrobacter sp. PRwf-1   1 1
No Yes Psychrobacter arcticus 273-4   1 1
No Yes Psychrobacter cryohalolentis K5   1 1
No Yes Moraxella catarrhalis RH4   1 1
No Yes Acinetobacter oleivorans DR1   1 1
No Yes Acinetobacter calcoaceticus PHEA-2   1 1
No Yes Acinetobacter baumannii ATCC 17978   1 1
No Yes Acinetobacter sp. ADP1   1 1
No Yes Methylophaga sp. JAM1   3 3
No Yes Cycloclasticus sp. P1   4 4
No Yes Francisella noatunensis subsp. orientalis str. Toba 04   1 1
No Yes Francisella sp. TX077308   1 1
No Yes Francisella philomiragia subsp. philomiragia ATCC 25017   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 17 17
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 4 4
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 3 3
No Yes Cryptococcus neoformans var. grubii H99   2 2
No Yes Cryptococcus neoformans B-3501A   2 2
No Yes Cryptococcus neoformans JEC21   2 2
No Yes Paracoccidioides brasiliensis Pb01   3 3
No Yes Paracoccidioides brasiliensis Pb03   3 3
No Yes Coccidioides posadasii str. Silveira   2 2
No Yes Coccidioides immitis RMSCC 3703   2 2
No Yes Coccidioides immitis RMSCC 2394   2 2
No Yes Coccidioides immitis H538.4   2 2
No Yes Ajellomyces dermatitidis ER-3   3 3
No Yes Histoplasma capsulatum H143   3 3
No Yes Histoplasma capsulatum H88   3 3
No Yes Histoplasma capsulatum G186AR   3 3
No Yes Aspergillus fumigatus A1163   1 1
No Yes Batrachochytrium dendrobatidis JEL423   3 3
No Yes Batrachochytrium dendrobatidis JAM81   3 3
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 1 1
No Yes Hordeum vulgare 22 Domesticated barley 2 2
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Neospora caninum Nc-Liverpool 6.2   1 1
No Yes Chroococcidiopsis thermalis PCC 7203   2 2
No Yes Chamaesiphon minutus PCC 6605   3 3
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Cyanobium gracile PCC 6307   2 2
No Yes Dactylococcopsis salina PCC 8305   1 1
No Yes Synechococcus sp. JA-2-3B'a(2-13)   1 1
No Yes Synechococcus sp. JA-3-3Ab   1 1
No Yes Synechococcus sp. CC9902   1 1
No Yes Synechococcus sp. RCC307   1 1
No Yes Synechococcus sp. CC9605   1 1
No Yes Synechococcus sp. WH 8102   1 1
No Yes Synechococcus sp. WH 7803   1 1
No Yes Synechococcus sp. PCC 7002   1 1
No Yes Synechococcus elongatus PCC 6301   2 2
No Yes Prochlorococcus marinus str. NATL1A   1 1
No Yes Prochlorococcus marinus str. MIT 9301   1 1
No Yes Prochlorococcus marinus str. AS9601   1 1
No Yes Prochlorococcus marinus subsp. pastoris str. CCMP1986   1 1
No Yes Prochlorococcus marinus str. MIT 9215   1 1
No Yes Prochlorococcus marinus str. MIT 9313   2 2
No Yes Prochlorococcus marinus str. MIT 9312   1 1
No Yes Prochlorococcus marinus str. MIT 9303   2 2
No Yes Prochlorococcus marinus str. NATL2A   1 1
No Yes Crinalium epipsammum PCC 9333   2 2
No Yes Oscillatoria nigro-viridis PCC 7112   5 5
No Yes Oscillatoria acuminata PCC 6304   1 1
No Yes Arthrospira platensis NIES-39   1 1
No Yes Cyanothece sp. PCC 7822   2 2
No Yes Cyanothece sp. PCC 7425   2 2
No Yes Cyanothece sp. PCC 7424   2 2
No Yes Cyanothece sp. ATCC 51142   1 1
No Yes Cyanothece sp. PCC 8801   2 2
No Yes Cyanobacterium aponinum PCC 10605   1 1
No Yes Cyanobacterium stanieri PCC 7202   1 1
No Yes Gloeobacter kilaueensis Gloeobacter sp. JS   1 1
No Yes Pleurocapsa minor Pleurocapsa sp. PCC 7327   1 1
No Yes Stanieria cyanosphaera PCC 7437   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   2 2
No Yes Cylindrospermum stagnale PCC 7417   2 2
No Yes Anabaena cylindrica PCC 7122   2 2
No Yes Frankia sp. EuI1c   1 1
No Yes Leptospira borgpetersenii serovar Hardjo-bovis str. JB197   1 1
No Yes Leptospira interrogans serovar Lai str. 56601   1 1
No Yes Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130   1 1
No Yes Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'   2 2
No Yes Bdellovibrio exovorus JSS   1 1
No Yes Neisseria meningitidis WUE 2594   1 1
No Yes Neisseria meningitidis G2136   1 1
No Yes Neisseria meningitidis M04-240196   1 1
No Yes Neisseria meningitidis M01-240149   1 1
No Yes Neisseria meningitidis NZ-05/33   1 1
No Yes Neisseria meningitidis M01-240355   1 1
No Yes Neisseria meningitidis 8013   1 1
No Yes Neisseria meningitidis 053442   1 1
No Yes Neisseria meningitidis Z2491   1 1
No Yes Neisseria meningitidis H44/76   1 1
No Yes Neisseria meningitidis alpha710   1 1
No Yes Neisseria meningitidis MC58   1 1
No Yes Neisseria gonorrhoeae TCDC-NG08107   1 1
No Yes Neisseria gonorrhoeae FA 1090   1 1
No Yes Ralstonia pickettii 12J   1 1
No Yes Ralstonia solanacearum FQY_4   1 1
No Yes Ralstonia solanacearum Po82   1 1
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Ralstonia solanacearum CMR15   1 1
No Yes Ralstonia solanacearum GMI1000   1 1
No Yes Polynucleobacter necessarius subsp. necessarius STIR1   2 2
No Yes Burkholderia sp. YI23   2 2
No Yes Burkholderia sp. KJ006   2 2
No Yes Burkholderia thailandensis MSMB121   2 2
No Yes Burkholderia pseudomallei MSHR305   1 1
No Yes Burkholderia pseudomallei NCTC 13179   1 1
No Yes Burkholderia pseudomallei BPC006   1 1
No Yes Burkholderia pseudomallei 1026b   1 1
No Yes Burkholderia pseudomallei 668   1 1
No Yes Burkholderia pseudomallei 1710b   1 1
No Yes Burkholderia pseudomallei K96243   1 1
No Yes Burkholderia lata   2 2
No Yes Burkholderia ambifaria MC40-6   2 2
No Yes Burkholderia cenocepacia MC0-3   2 2
No Yes Burkholderia cenocepacia AU 1054   2 2
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Burkholderia multivorans ATCC 17616   1 1
No Yes Burkholderia cepacia GG4   1 1
No Yes Alicycliphilus denitrificans BC   1 1
No Yes Variovorax paradoxus B4   2 2
No Yes Variovorax paradoxus EPS   1 1
No Yes Bordetella pertussis CS   1 1
No Yes Bordetella parapertussis 18323   1 1
No Yes Bordetella parapertussis Bpp5   1 1
No Yes Bordetella bronchiseptica MO149   1 1
No Yes Bordetella bronchiseptica 253   1 1
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   1 1
No Yes Caulobacter crescentus CB15   3 3
No Yes Zymomonas mobilis subsp. mobilis ATCC 29191   1 1
No Yes Zymomonas mobilis subsp. mobilis CP4   1 1
No Yes Zymomonas mobilis subsp. mobilis ATCC 10988   1 1
No Yes Zymomonas mobilis subsp. mobilis ZM4   1 1
No Yes Zymomonas mobilis subsp. pomaceae ATCC 29192   1 1
No Yes Phaeobacter gallaeciensis DSM 17395   1 1
No Yes Phaeobacter gallaeciensis DSM 26640   1 1
No Yes Leisingera methylohalidivorans DSM 14336   2 2
No Yes Octadecabacter antarcticus 307   2 2
No Yes Octadecabacter arcticus 238   4 4
No Yes Rhodobacter sphaeroides KD131   1 1
No Yes Rhodobacter sphaeroides 2.4.1   1 1
No Yes Paracoccus aminophilus JCM 7686   1 1
No Yes Gluconacetobacter diazotrophicus PAl 5   1 1
No Yes Gluconobacter oxydans H24   1 1
No Yes Methylobacterium extorquens DM4   1 1
No Yes Methylobacterium extorquens PA1   1 1
No Yes Brucella ceti TE10759-12   1 1
No Yes Brucella ceti TE28753-12   1 1
No Yes Brucella canis HSK A52141   1 1
No Yes Brucella suis VBI22   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella suis 1330   1 1
No Yes Brucella melitensis NI   1 1
No Yes Brucella melitensis M5-90   1 1
No Yes Brucella melitensis M28   1 1
No Yes Brucella melitensis bv. 1 str. 16M   1 1
No Yes Brucella abortus A13334   1 1
No Yes Brucella melitensis biovar Abortus 2308   1 1
No Yes Brucella abortus bv. 1 str. 9-941   1 1
No Yes Sinorhizobium fredii USDA 257   1 1
No Yes Sinorhizobium fredii HH103   1 1
No Yes Sinorhizobium meliloti 2011   1 1
No Yes Sinorhizobium meliloti GR4   1 1
No Yes Sinorhizobium meliloti Rm41   1 1
No Yes Sinorhizobium meliloti SM11   1 1
No Yes Sinorhizobium meliloti BL225C   1 1
No Yes Sinorhizobium meliloti 1021   1 1
No Yes Rhizobium etli CFN 42   1 1
No Yes Rhizobium etli bv. mimosae str. Mim1   1 1
No Yes Rhizobium tropici CIAT 899   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM2304   1 1
No Yes Rhizobium leguminosarum bv. trifolii WSM1325   1 1
No Yes Mesorhizobium australicum WSM2073   1 1
No Yes Hyphomicrobium nitrativorans NL23   1 1
No Yes Hyphomicrobium denitrificans 1NES1   1 1
No Yes Oligotropha carboxidovorans OM5   2 2
No Yes Oligotropha carboxidovorans OM5   2 2
No Yes Rhodopseudomonas palustris DX-1   2 2
No Yes Rhodopseudomonas palustris TIE-1   2 2
No Yes Rhodopseudomonas palustris HaA2   3 3
No Yes Rhodopseudomonas palustris BisB5   3 3
No Yes Rhodopseudomonas palustris BisB18   4 4
No Yes Rhodopseudomonas palustris CGA009   2 2
No Yes Bradyrhizobium sp. S23321   4 4
No Yes Bradyrhizobium sp. BTAi1   4 4
No Yes Bradyrhizobium oligotrophicum S58   3 3
No Yes Bradyrhizobium japonicum USDA 6   5 5
No Yes Simiduia agarivorans SA1 = DSM 21679   2 2
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Vibrio sp. EJY3   1 1
No Yes Vibrio parahaemolyticus BB22OP   1 1
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   1 1
No Yes Vibrio anguillarum Listonella anguillarum M3   1 1
No Yes Vibrio nigripulchritudo VibrioScope   4 4
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   1 1
No Yes Idiomarina loihiensis GSL 199   3 3
No Yes Shewanella sp. W3-18-1   2 2
No Yes Shewanella sp. ANA-3   2 2
No Yes Shewanella baltica BA175   1 1
No Yes Shewanella baltica OS678   2 2
No Yes Shewanella baltica OS117   2 2
No Yes Shewanella baltica OS223   2 2
No Yes Shewanella baltica OS195   2 2
No Yes Shewanella baltica OS155   2 2
No Yes Shewanella sp. MR-7   3 3
No Yes Shewanella putrefaciens 200   2 2
No Yes Glaciecola psychrophila 170   5 5
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   3 3
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   3 3
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   4 4
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   4 4
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   4 4
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   3 3
No Yes Alteromonas macleodii str. 'English Channel 615'   3 3
No Yes Alteromonas macleodii AltDE1   3 3
No Yes Alteromonas macleodii str. 'English Channel 673'   3 3
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   3 3
No Yes Alteromonas macleodii str. 'Black Sea 11'   3 3
No Yes Alteromonas macleodii ATCC 27126   3 3
No Yes Alcanivorax dieselolei B5   3 3
No Yes Thalassolituus oleivorans MIL-1   1 1
No Yes Stenotrophomonas maltophilia D457   1 1
No Yes Stenotrophomonas maltophilia JV3   1 1
No Yes Stenotrophomonas maltophilia R551-3   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   2 2
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas oryzae pv. oryzicola BLS256   1 1
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   1 1
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Spiribacter salinus M19-40   1 1
No Yes Legionella pneumophila str. Paris   2 2
No Yes Legionella pneumophila str. Lens   2 2
No Yes Legionella pneumophila subsp. pneumophila LPE509   3 3
No Yes Legionella pneumophila subsp. pneumophila str. Thunder Bay   3 3
No Yes Legionella pneumophila subsp. pneumophila str. Philadelphia 1   3 3
No Yes Legionella pneumophila subsp. pneumophila   2 2
No Yes Legionella pneumophila subsp. pneumophila   2 2
No Yes Legionella pneumophila subsp. pneumophila ATCC 43290   3 3
No Yes Legionella pneumophila 2300/99 Alcoy   2 2
No Yes Proteus mirabilis BB2000   1 1
No Yes Morganella morganii subsp. morganii KT   1 1
No Yes Edwardsiella tarda C07-087   1 1
No Yes Edwardsiella tarda FL6-60   1 1
No Yes Rahnella aquatilis HX2   1 1
No Yes Yersinia pseudotuberculosis PB1/+   1 1
No Yes Yersinia pseudotuberculosis YPIII   1 1
No Yes Yersinia pseudotuberculosis IP 32953   1 1
No Yes Yersinia pestis biovar Microtus str. 91001   1 1
No Yes Yersinia pestis A1122   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   1 1
No Yes Yersinia pestis Nepal516   1 1
No Yes Yersinia pestis Antiqua   1 1
No Yes Yersinia pestis Angola   1 1
No Yes Yersinia pestis CO92   1 1
No Yes Yersinia pestis KIM10+   1 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   1 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   1 1
No Yes Serratia sp. AS13   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Serratia plymuthica 4Rx13   1 1
No Yes Serratia marcescens FGI94   1 1
No Yes Serratia marcescens WW4   1 1
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Dickeya dadantii Ech586   1 1
No Yes Dickeya dadantii 3937   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   1 1
No Yes Pantoea ananatis LMG 5342   1 1
No Yes Pantoea ananatis PA13   1 1
No Yes Pantoea ananatis AJ13355   1 1
No Yes Erwinia pyrifoliae DSM 12163   1 1
No Yes Erwinia amylovora CFBP1430   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Cronobacter sakazakii SP291   1 1
No Yes Cronobacter sakazakii ATCC BAA-894   1 1
No Yes Raoultella ornithinolytica B6   1 1
No Yes Shigella sonnei 53G   1 1
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella flexneri 2a str. 2457T   1 1
No Yes Shigella flexneri 2a str. 301   1 1
No Yes Shigella dysenteriae 1617   1 1
No Yes Shigella boydii Sb227   1 1
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   1 1
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   1 1
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   1 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   1 1
No Yes Klebsiella oxytoca KCTC 1686   1 1
No Yes Klebsiella pneumoniae JM45   1 1
No Yes Klebsiella pneumoniae CG43   1 1
No Yes Klebsiella pneumoniae KCTC 2242   1 1
No Yes Klebsiella pneumoniae 342   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   1 1
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   1 1
No Yes Enterobacter aerogenes EA1509E   2 2
No Yes Escherichia coli E24377A   1 1
No Yes Escherichia coli E. coli PMV-1   1 1
No Yes Escherichia coli JJ1886   1 1
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli APEC O78   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2050   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   1 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli NA114   1 1
No Yes Escherichia coli P12b   1 1
No Yes Escherichia coli str. 'clone D i2'   1 1
No Yes Escherichia coli str. 'clone D i14'   1 1
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli Xuzhou21   1 1
No Yes Escherichia coli IHE3034   1 1
No Yes Escherichia coli UMNK88   1 1
No Yes Escherichia coli O83:H1 str. NRG 857C   1 1
No Yes Escherichia coli ABU 83972   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli LF82   1 1
No Yes Escherichia coli ED1a   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Escherichia coli UMN026   1 1
No Yes Escherichia coli 55989   1 1
No Yes Escherichia coli S88   1 1
No Yes Escherichia coli IAI1   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli ATCC 8739   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SMS-3-5   1 1
No Yes Escherichia coli SE15   1 1
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli APEC O1   1 1
No Yes Escherichia coli O103:H2 str. 12009   1 1
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli 536   1 1
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli O55:H7 str. RM12579   1 1
No Yes Escherichia coli O55:H7 str. CB9615   1 1
No Yes Escherichia coli O26:H11 str. 11368   1 1
No Yes Escherichia coli CFT073   1 1
No Yes Escherichia coli O111:H- str. 11128   1 1
No Yes Escherichia coli O127:H6 str. E2348/69   1 1
No Yes Escherichia coli O157:H7 str. TW14359   1 1
No Yes Escherichia coli O157:H7 str. EC4115   1 1
No Yes Escherichia coli O157:H7 str. Sakai   1 1
No Yes Escherichia coli O157:H7 str. EDL933   1 1
No Yes Escherichia coli str. K-12 substr. MDS42   1 1
No Yes Escherichia coli BW2952   1 1
No Yes Escherichia coli str. K-12 substr. MG1655   1 1
No Yes Escherichia coli str. K-12 substr. W3110   1 1
No Yes Escherichia coli str. K-12 substr. DH10B   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Enterobacter cloacae SCF1   1 1
No Yes Enterobacter cloacae EcWSU1   1 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   1 1
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   1 1
No Yes Pseudomonas denitrificans ATCC 13867   2 2
No Yes Pseudomonas syringae pv. phaseolicola 1448A   1 1
No Yes Pseudomonas syringae pv. syringae B728a   1 1
No Yes Pseudomonas stutzeri DSM 10701   1 1
No Yes Pseudomonas monteilii SB3101   2 2
No Yes Pseudomonas monteilii SB3078   2 2
No Yes Pseudomonas putida H8234   1 1
No Yes Pseudomonas putida HB3267   1 1
No Yes Pseudomonas putida NBRC 14164   2 2
No Yes Pseudomonas putida DOT-T1E   2 2
No Yes Pseudomonas putida S16   1 1
No Yes Pseudomonas putida BIRD-1   2 2
No Yes Pseudomonas putida W619   1 1
No Yes Pseudomonas putida ND6   2 2
No Yes Pseudomonas putida KT2440   2 2
No Yes Pseudomonas putida GB-1   2 2
No Yes Pseudomonas protegens CHA0   1 1
No Yes Pseudomonas poae RE*1-1-14   1 1
No Yes Pseudomonas fluorescens F113   1 1
No Yes Pseudomonas fluorescens A506   1 1
No Yes Pseudomonas fluorescens R124   2 2
No Yes Pseudomonas fluorescens Pf0-1   2 2
No Yes Pseudomonas resinovorans NBRC 106553   2 2
No Yes Pseudomonas mendocina NK-01   3 3
No Yes Pseudomonas aeruginosa SCV20265   2 2
No Yes Pseudomonas aeruginosa MTB-1   2 2
No Yes Pseudomonas aeruginosa LES431   2 2
No Yes Pseudomonas aeruginosa RP73   2 2
No Yes Pseudomonas aeruginosa B136-33   2 2
No Yes Pseudomonas aeruginosa PA1R   2 2
No Yes Pseudomonas aeruginosa PA1   2 2
No Yes Pseudomonas aeruginosa DK2   2 2
No Yes Pseudomonas aeruginosa NCGM2.S1   2 2
No Yes Pseudomonas aeruginosa M18   2 2
No Yes Pseudomonas aeruginosa LESB58   2 2
No Yes Pseudomonas aeruginosa PA7   2 2
No Yes Pseudomonas aeruginosa PAO1   2 2
No Yes Acinetobacter genomosp. 13TU RUH2624   1 1
No Yes Acinetobacter sp. SH024   1 1
No Yes Acinetobacter calcoaceticus ruh2202   1 1
No Yes Acinetobacter baumannii ZW85-1   1 1
No Yes Acinetobacter baumannii TYTH-1   1 1
No Yes Acinetobacter baumannii BJAB0868   1 1
No Yes Acinetobacter baumannii BJAB0715   1 1
No Yes Acinetobacter baumannii BJAB07104   1 1
No Yes Acinetobacter baumannii TCDC-AB0715   1 1
No Yes Acinetobacter baumannii D1279779   1 1
No Yes Acinetobacter baumannii MDR-TJ   1 1
No Yes Acinetobacter baumannii 1656-2   1 1
No Yes Acinetobacter baumannii ATCC 19606   1 1
No Yes Acinetobacter baumannii AB307-0294   1 1
No Yes Acinetobacter baumannii AYE   1 1
No Yes Acinetobacter baumannii SDF   1 1
No Yes Acinetobacter baumannii MDR-ZJ06   1 1
No Yes Acinetobacter baumannii AB0057   1 1
No Yes Acinetobacter baumannii ACICU   1 1
No Yes Acinetobacter radioresistens SH164   1 1
No Yes Acinetobacter junii SH205   1 1
No Yes Acinetobacter johnsonii SH046   1 1
No Yes Acinetobacter lwoffii SH145   1 1
No Yes Methylophaga sp. JAM7   1 1
No Yes Cycloclasticus zancles 7-ME   3 3
No Yes Francisella noatunensis subsp. orientalis LADL--07-285A   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 21 21
No Yes Homo sapiens (NCBI version) Human 13 13
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 5 5
No Yes Heliconius numata (Incomplete)   4 4
No Yes Moniliophthora perniciosa FA553 (Genome survey)   2 2
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   1 1
No Yes Malus x domestica (Duplicate) Apple 6 6
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   2 2
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Phoenix dactylifera (Early draft) Date palm 2 2
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes Homo sapiens 69_37 Human 6 6
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 6 6
No Yes Gorilla gorilla 69_3.1 Western gorilla 6 6
No Yes Pongo abelii 69_2 Sumatran orangutan 6 6
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 6 6
No Yes Macaca mulatta 69_1 Rhesus monkey 6 6
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 6 6
No Yes Otolemur garnettii 69_3 Small-eared galago 7 7
No Yes Microcebus murinus 69_1 Gray mouse lemur 5 5
No Yes Rattus norvegicus 69_3.4 Norway rat 7 7
No Yes Mus musculus 69_38 House mouse 5 5
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 4 4
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 6 6
No Yes Cavia porcellus 69_3 Domestic guinea pig 6 6
No Yes Oryctolagus cuniculus 69_2 Rabbit 6 6
No Yes Ochotona princeps 69 American pika 6 5
No Yes Tupaia belangeri 69 Northern tree shrew 4 4
No Yes Sus scrofa 69_10.2 Pig 7 7
No Yes Bos taurus 69_3.1 Cattle 6 6
No Yes Vicugna pacos 69_1 Alpaca 3 3
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 6 6
No Yes Mustela putorius furo 69_1.0 Domestic ferret 6 6
No Yes Ailuropoda melanoleuca 69_1 Giant panda 6 6
No Yes Canis familiaris 69_3.1 Dog 8 8
No Yes Felis catus 69 Domestic cat 6 6
No Yes Equus caballus 69_2 Horse 6 6
No Yes Myotis lucifugus 69_2.0 Little brown bat 5 5
No Yes Pteropus vampyrus 69_1 Large flying fox 5 5
No Yes Sorex araneus 69_1 European shrew 3 3
No Yes Erinaceus europaeus 69 Western European hedgehog 3 3
No Yes Procavia capensis 69_1 Cape rock hyrax 6 6
No Yes Loxodonta africana 69_3 African savanna elephant 7 7
No Yes Echinops telfairi 69 Small Madagascar hedgehog 5 5
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 6 6
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 4 4
No Yes Macropus eugenii 69_1.0 Tammar wallaby 5 5
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 5 5
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 6 6
No Yes Ornithorhynchus anatinus 69_5 Platypus 5 5
No Yes Petromyzon marinus 69_7.0 Sea lamprey 3 3
No Yes Meleagris gallopavo 69_2 Turkey 7 7
No Yes Gallus gallus 69_2 Chicken 8 8
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 7 7
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 8 8
No Yes Anolis carolinensis 69_2.0 Green anole 5 5
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 7 7
No Yes Latimeria chalumnae 69_1 Coelacanth 8 8
No Yes Gadus morhua 69_1 Atlantic cod 9 9
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 6 6
No Yes Takifugu rubripes 69_4 Torafugu 7 7
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 8 8
No Yes Oryzias latipes 69_1 Japanese medaka 5 5
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 7 7
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 7 7
No Yes Danio rerio 69_9 Zebrafish 9 9
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 4 4
No Yes Ciona intestinalis 69 Vase tunicate 2 2
No Yes Drosophila melanogaster 69_5 Fruit fly 3 3
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 1_Upper_euphotic (meta-genome)   1 1
No Yes 2_Base_of_chrolophyll_max (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   4 4
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   9 9
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   12 12
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   6 6
No Yes Combined (meta-genome)   17 17
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   9 9
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   4 4
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   7 7
No Yes Dump bottom (Dump bottom) (meta-genome)   28 28
No Yes Dump top (Dump top) (meta-genome)   22 22
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   3 3
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   8 8
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   12 12
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   5 5
No Yes Fungus garden combined (combined) (meta-genome)   8 8
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   13 13
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   17 17
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   2 2
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   3 3
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   9 9
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   31 31
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   9 9
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   6 6
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   9 9
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   5 5
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   9 9
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   6 6
No Yes NCBI 2017_08 genome   54005 53981
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   12 12
No Yes Protozoadb 2010_08 (Protozoadb)   2 2
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   15 15
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   12 12
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   20 20
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   6 6
No Yes Sludge/US, Jazz Assembly (meta-genome)   6 6
No Yes Sludge/US, Phrap Assembly (meta-genome)   9 9
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   12 12
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   30 30
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   17 17
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   14 14
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   12 12
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   14 14
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   23 23
No Yes STRING v9.0.5 (STRING)   861 859
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   5 5
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   20 20
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   7 7
No Yes Uniprot 2018_03 genome   15592 15549
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   5 5
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   4 4
No Yes Global Ocean Sampling Expedition (GOS)   1178 1178
No Yes NCBI plasmid sequences (Plasmids)   7 7
No Yes PDB chains (SCOP 1.75) (PDB)   4 4
No Yes Protein Data Bank (all PDB sequenc)   60 60
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   138 138
No Yes TargetDB (Targets)   3 3
No Yes The Salmonella enterica Pan-genome (meta-genome)   31 31

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