SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


E6 C-terminal domain-like superfamily domain assignments
in
Gorilla gorilla 69_3.1

Network of domain occurrence in all genomes



No domain assignments for these genomes.


Add assignments from groups of genomes

View all assignments containing a E6 C-terminal domain-like domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   6321 6321
No Yes Desulfotomaculum carboxydivorans CO-1-SRB   1 1
No Yes Caldicellulosiruptor lactoaceticus 6A   1 1
No Yes Caldicellulosiruptor kristjanssonii 177R1B   1 1
No Yes Candidatus Methylomirabilis oxyfera   1 1
No Yes Sorangium cellulosum 'So ce 56'   1 1
No Yes Mesorhizobium sp. BNC1   1 1
No Yes Nitrobacter winogradskyi Nb-255   1 1
No Yes Aciduliprofundum boonei T469   1 1
No Yes Rhodobacter sphaeroides 2.4.1   1 1
No Yes 2_050719S (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   1 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   338 202
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   4 4
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   4528 2351
No Yes NCBI viral sequences (Viral)   228 117
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   16 11
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   19 19
No Yes TargetDB (Targets)   1 1
No Yes UniProt viral sequences (Viral)   1162 606

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]