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Seryl-tRNA synthetase (SerRS) family domain assignments
in
all bacterial genomes

Assignment details

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7 selected genomes have 7 significant domains in 7 proteins.


Thermus sp. CCB_US3_UF1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|384439555|ref|YP_005654279.1|   1.67e-21   0.0000113   3-110   1set A:1-110  

Thermus scotoductus SA-01 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|320450406|ref|YP_004202502.1|   5.07e-23   0.00000974   1-110   1set A:1-110  

Thermus thermophilus HB27 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|46198828|ref|YP_004495.1|   8.78e-23   0.00000152   1-110   1set A:1-110  

Thermus oshimai JL-2 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|410732762|ref|YP_006972680.1|   8.37e-23   0.0000131   1-110   1set A:1-110  

Thermus thermophilus JL-18 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386360606|ref|YP_006058851.1|   6.8e-23   0.00000181   1-110   1set A:1-110  

Thermus thermophilus SG0.5JP17-16 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|384431061|ref|YP_005640421.1|   6.8e-23   0.00000181   1-110   1set A:1-110  

Thermus thermophilus HB8 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|55980844|ref|YP_144141.1|   4.81e-23   0.00000191   1-110   1set A:1-110  

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View all assignments containing a Seryl-tRNA synthetase (SerRS) domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   101 101
No Yes Thermus sp. CCB_US3_UF1   1 1
No Yes Thermus scotoductus SA-01   1 1
No Yes Thermus thermophilus HB27   1 1
No Yes Thermus oshimai JL-2   1 1
No Yes Thermus thermophilus JL-18   1 1
No Yes Thermus thermophilus SG0.5JP17-16   1 1
No Yes Thermus thermophilus HB8   1 1
No Yes 3_050719R (meta-genome)   4 4
No Yes Bath Hot Springs, planktonic community (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes NCBI 2017_08 genome   32 32
No Yes STRING v9.0.5 (STRING)   2 2
No Yes Uniprot 2018_03 genome   17 17
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   8 8
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   22 22
No Yes TargetDB (Targets)   1 1

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