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  Home > Genomes > ARID-like domains in all eukaryotic genomes


ARID-like superfamily domain assignments
in
all eukaryotic genomes

Assignment details

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25 selected genomes have 405 significant domains in 405 proteins.

Showing genomes 51 to 75 of 527
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Anolis carolinensis 76_2.0 has 15 significant domains in 15 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSACAP00000000033   1.31e-29   68-181   ARID domain  
ENSACAP00000001348   9.03e-33   297-397   ARID domain  
ENSACAP00000002345   7.06e-34   14-116   ARID domain  
ENSACAP00000003652   3.66e-23   605-711   ARID domain  
ENSACAP00000004863   0.000000000000733   1-53   ARID domain  
ENSACAP00000005063   1.31e-31   1162-1275   ARID domain  
ENSACAP00000005126   1.11e-30   75-191   ARID domain  
ENSACAP00000006488   0.0000000000000183   12-77   ARID domain  
ENSACAP00000010738   4.06e-33   125-235   ARID domain  
ENSACAP00000014391   4.06e-34   306-415   ARID domain  
ENSACAP00000014875   2.09e-35   206-320   ARID domain  
ENSACAP00000016351   1.96e-29   719-833   ARID domain  
ENSACAP00000021025   3.4e-27   1-89   ARID domain  
ENSACAP00000021851   1.09e-29   645-759   ARID domain  
ENSACAP00000022177   3.66e-23   603-709   ARID domain  
 
Weak hits:
ENSACAP00000018940   0.0497   1649-1725   ARID domain  

Xenopus laevis has 10 significant domains in 10 proteins.

     

Sequence ID   Evalue   Region   Family  
gi|147903567|ref|NP_001090096|   0.0000366   286-327   ARID domain  
gi|148225552|ref|NP_001088232|   2.09e-23   590-697   ARID domain  
gi|148231984|ref|NP_001085467|   5.62e-39   192-316   ARID domain  
gi|163915555|gb|AAI57423|   2.88e-39   195-319   ARID domain  
gi|49119116|gb|AAH72808|   5.62e-39   192-316   ARID domain  
gi|54037984|gb|AAH84217|   2.09e-23   590-697   ARID domain  
gi|58429893|gb|AAW78333|   5.62e-39   192-316   ARID domain  
gi|76779566|gb|AAI06446|   6.8e-34   210-324   ARID domain  
gi|76780134|gb|AAI06356|   0.0000366   286-327   ARID domain  
gi|82184626|sp|Q6GQD7|   5.62e-39   192-316   ARID domain  

Xenopus tropicalis 76_4.2 has 15 significant domains in 15 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSXETP00000015599   1.29e-29   61-176   ARID domain  
ENSXETP00000017471   5.49e-29   55-173   ARID domain  
ENSXETP00000023324   1.96e-34   190-305   ARID domain  
ENSXETP00000024535   1.31e-31   141-254   ARID domain  
ENSXETP00000026194   4.58e-35   288-410   ARID domain  
ENSXETP00000028658   1.7e-32   299-402   ARID domain  
ENSXETP00000028671   4.19e-33   299-402   ARID domain  
ENSXETP00000030678   1.02e-32   323-430   ARID domain  
ENSXETP00000032105   6.28e-33   13-116   ARID domain  
ENSXETP00000033680   1.12e-23   579-686   ARID domain  
ENSXETP00000044722   4.32e-30   667-781   ARID domain  
ENSXETP00000046714   5.62e-39   195-319   ARID domain  
ENSXETP00000056949   5.62e-39   195-319   ARID domain  
ENSXETP00000063212   1.1e-26   65-174   ARID domain  
ENSXETP00000063751   4.32e-34   302-412   ARID domain  

Latimeria chalumnae 76_1 has 18 significant domains in 18 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSLACP00000007578   1.22e-18   1-65   ARID domain  
ENSLACP00000008739   7.85e-24   429-537   ARID domain  
ENSLACP00000008943   1.22e-27   1-90   ARID domain  
ENSLACP00000008944   2.88e-20   15-86   ARID domain  
ENSLACP00000010032   4.19e-30   620-733   ARID domain  
ENSLACP00000013785   1.06e-29   167-285   ARID domain  
ENSLACP00000014279   2.09e-28   64-174   ARID domain  
ENSLACP00000014409   3.14e-30   58-173   ARID domain  
ENSLACP00000014410   3.14e-30   58-173   ARID domain  
ENSLACP00000015773   3.66e-31   99-210   ARID domain  
ENSLACP00000016039   9.03e-33   3-107   ARID domain  
ENSLACP00000017061   3.4e-33   313-428   ARID domain  
ENSLACP00000018259   1.11e-38   198-322   ARID domain  
ENSLACP00000021481   1.83e-34   298-408   ARID domain  
ENSLACP00000021482   1.83e-34   297-407   ARID domain  
ENSLACP00000022408   2.75e-33   119-234   ARID domain  
ENSLACP00000022687   4.58e-31   296-407   ARID domain  
ENSLACP00000023149   1.44e-29   56-170   ARID domain  

Lepisosteus oculatus 76 has 19 significant domains in 19 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSLOCP00000002797   1.44e-38   197-321   ARID domain  
ENSLOCP00000002813   1.44e-38   197-321   ARID domain  
ENSLOCP00000004543   7.72e-30   967-1080   ARID domain  
ENSLOCP00000006200   6.41e-35   13-118   ARID domain  
ENSLOCP00000008045   1.44e-37   241-363   ARID domain  
ENSLOCP00000008221   3.14e-33   308-429   ARID domain  
ENSLOCP00000010126   3.53e-23   689-797   ARID domain  
ENSLOCP00000010141   3.27e-23   614-722   ARID domain  
ENSLOCP00000011415   8.11e-33   301-410   ARID domain  
ENSLOCP00000012401   1.31e-29   53-168   ARID domain  
ENSLOCP00000015154   0.000000000183   838-889   ARID domain  
ENSLOCP00000018527   2.75e-35   19-125   ARID domain  
ENSLOCP00000018529   2.75e-35   56-162   ARID domain  
ENSLOCP00000018646   5.62e-36   242-357   ARID domain  
ENSLOCP00000018647   5.49e-36   242-357   ARID domain  
ENSLOCP00000019579   2.22e-32   304-404   ARID domain  
ENSLOCP00000020286   1.23e-32   13-116   ARID domain  
ENSLOCP00000020822   3.92e-31   923-1035   ARID domain  
ENSLOCP00000021020   3.01e-25   76-170   ARID domain  

Gadus morhua 76_1 has 19 significant domains in 19 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSGMOP00000001091   5.49e-29   904-1017   ARID domain  
ENSGMOP00000001262   1.24e-32   117-241   ARID domain  
ENSGMOP00000001567   2.49e-29   60-179   ARID domain  
ENSGMOP00000002793   4.97e-36   209-329   ARID domain  
ENSGMOP00000002812   2.22e-35   193-306   ARID domain  
ENSGMOP00000002825   2.62e-36   81-201   ARID domain  
ENSGMOP00000002837   1.96e-35   1-113   ARID domain  
ENSGMOP00000004288   2.49e-32   2-117   ARID domain  
ENSGMOP00000004305   1.31e-35   1-115   ARID domain  
ENSGMOP00000005295   7.46e-32   324-431   ARID domain  
ENSGMOP00000008645   6.28e-34   7-117   ARID domain  
ENSGMOP00000012883   6.15e-30   435-543   ARID domain  
ENSGMOP00000017190   2.75e-26   14-94   ARID domain  
ENSGMOP00000018683   3.27e-33   300-410   ARID domain  
ENSGMOP00000020159   5.49e-32   302-405   ARID domain  
ENSGMOP00000020326   1.44e-29   530-642   ARID domain  
ENSGMOP00000021019   4.58e-31   9-122   ARID domain  
ENSGMOP00000021028   4.45e-29   60-174   ARID domain  
ENSGMOP00000021154   1.83e-30   58-174   ARID domain  

Tetraodon nigroviridis 76_8 has 19 significant domains in 19 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTNIP00000000323   9.55e-31   63-171   ARID domain  
ENSTNIP00000000510   8.24e-30   60-180   ARID domain  
ENSTNIP00000002632   0.00000000249   1-47   ARID domain  
ENSTNIP00000005145   6.28e-33   296-405   ARID domain  
ENSTNIP00000007323   3.66e-29   626-738   ARID domain  
ENSTNIP00000008339   4.45e-29   950-1062   ARID domain  
ENSTNIP00000008486   6.93e-33   13-115   ARID domain  
ENSTNIP00000008487   6.93e-33   13-115   ARID domain  
ENSTNIP00000009038   3.01e-35   21-135   ARID domain  
ENSTNIP00000009503   7.19e-37   1-115   ARID domain  
ENSTNIP00000009577   1.1e-30   57-165   ARID domain  
ENSTNIP00000009875   3.01e-29   55-173   ARID domain  
ENSTNIP00000010287   7.33e-33   314-422   ARID domain  
ENSTNIP00000010428   0.000000000955   867-914   ARID domain  
ENSTNIP00000012537   1.7e-28   913-1026   ARID domain  
ENSTNIP00000015474   8.24e-30   62-182   ARID domain  
ENSTNIP00000016452   5.89e-33   21-123   ARID domain  
ENSTNIP00000019762   1.57e-33   292-396   ARID domain  
ENSTNIP00000020625   4.19e-30   404-513   ARID domain  
 
Weak hits:
ENSTNIP00000019137   0.0173   205-233   ARID domain  

Takifugu rubripes 76_4 has 53 significant domains in 53 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTRUP00000000685   2.35e-29   54-168   ARID domain  
ENSTRUP00000000686   9.16e-30   61-180   ARID domain  
ENSTRUP00000000687   9.16e-30   60-179   ARID domain  
ENSTRUP00000000688   0.0000000000000144   61-138   ARID domain  
ENSTRUP00000000689   8.89e-30   58-177   ARID domain  
ENSTRUP00000000690   8.89e-30   58-177   ARID domain  
ENSTRUP00000000691   1.96e-29   54-168   ARID domain  
ENSTRUP00000000692   2.49e-30   54-173   ARID domain  
ENSTRUP00000003549   0.000000000667   854-902   ARID domain  
ENSTRUP00000003550   1.96e-31   332-425   ARID domain  
ENSTRUP00000005009   7.06e-31   78-191   ARID domain  
ENSTRUP00000005010   9.81e-31   77-188   ARID domain  
ENSTRUP00000005011   8.11e-31   64-177   ARID domain  
ENSTRUP00000005012   7.85e-31   54-167   ARID domain  
ENSTRUP00000006755   0.00000000000000183   28-125   ARID domain  
ENSTRUP00000006757   0.000000000000051   29-117   ARID domain  
ENSTRUP00000006758   0.00000000000000196   27-124   ARID domain  
ENSTRUP00000006759   0.0000000000000017   27-124   ARID domain  
ENSTRUP00000006760   0.0000000000000017   27-124   ARID domain  
ENSTRUP00000009662   2.75e-32   13-115   ARID domain  
ENSTRUP00000009663   2.62e-32   13-115   ARID domain  
ENSTRUP00000011152   3.14e-38   198-322   ARID domain  
ENSTRUP00000011153   3.01e-38   198-322   ARID domain  
ENSTRUP00000021442   2.62e-33   305-417   ARID domain  
ENSTRUP00000021443   2.49e-33   303-415   ARID domain  
ENSTRUP00000021444   2.49e-33   303-415   ARID domain  
ENSTRUP00000021445   2.49e-33   303-415   ARID domain  
ENSTRUP00000021446   1.96e-33   303-415   ARID domain  
ENSTRUP00000026934   6.15e-33   316-425   ARID domain  
ENSTRUP00000026935   6.15e-33   321-430   ARID domain  
ENSTRUP00000026936   3.4e-33   68-181   ARID domain  
ENSTRUP00000028363   1.31e-30   394-502   ARID domain  
ENSTRUP00000028364   1.28e-30   412-520   ARID domain  
ENSTRUP00000028365   1.27e-30   396-504   ARID domain  
ENSTRUP00000031204   6.8e-29   932-1044   ARID domain  
ENSTRUP00000031205   5.62e-29   659-771   ARID domain  
ENSTRUP00000031206   5.1e-29   514-626   ARID domain  
ENSTRUP00000031207   3.66e-29   632-744   ARID domain  
ENSTRUP00000033883   1.18e-29   55-173   ARID domain  
ENSTRUP00000033884   1.15e-29   55-173   ARID domain  
ENSTRUP00000033885   1.12e-29   55-173   ARID domain  
ENSTRUP00000034018   3.79e-28   917-1030   ARID domain  
ENSTRUP00000034019   2.88e-28   559-672   ARID domain  
ENSTRUP00000034020   2.88e-28   535-648   ARID domain  
ENSTRUP00000034021   2.88e-28   526-639   ARID domain  
ENSTRUP00000034022   3.14e-28   596-709   ARID domain  
ENSTRUP00000034613   1.03e-37   3-125   ARID domain  
ENSTRUP00000037693   2.49e-21   605-711   ARID domain  
ENSTRUP00000037694   2.49e-21   615-721   ARID domain  
ENSTRUP00000037695   2.09e-21   589-695   ARID domain  
ENSTRUP00000040053   7.72e-36   1-114   ARID domain  
ENSTRUP00000043755   4.84e-37   7-128   ARID domain  
ENSTRUP00000043756   1.09e-35   192-306   ARID domain  

Gasterosteus aculeatus 76_1 has 15 significant domains in 15 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSGACP00000000654   1.18e-29   60-180   ARID domain  
ENSGACP00000004645   2.22e-21   531-637   ARID domain  
ENSGACP00000005282   1.7e-33   291-407   ARID domain  
ENSGACP00000005290   7.46e-33   303-410   ARID domain  
ENSGACP00000005684   4.84e-32   304-407   ARID domain  
ENSGACP00000008925   8.24e-30   457-566   ARID domain  
ENSGACP00000009597   1.57e-27   917-1030   ARID domain  
ENSGACP00000010121   1.44e-29   533-645   ARID domain  
ENSGACP00000011075   7.46e-39   176-300   ARID domain  
ENSGACP00000014020   4.19e-32   321-428   ARID domain  
ENSGACP00000015717   7.19e-29   60-175   ARID domain  
ENSGACP00000016095   4.19e-30   58-177   ARID domain  
ENSGACP00000020914   3.01e-33   20-119   ARID domain  
ENSGACP00000025092   1.31e-29   54-165   ARID domain  
ENSGACP00000025804   8.24e-32   13-114   ARID domain  

Oryzias latipes 76_1 has 16 significant domains in 16 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSORLP00000005534   6.93e-29   936-1049   ARID domain  
ENSORLP00000005984   1.7e-33   317-426   ARID domain  
ENSORLP00000010296   1.19e-38   205-329   ARID domain  
ENSORLP00000012097   0.00000000000353   2-56   ARID domain  
ENSORLP00000012849   2.35e-33   309-418   ARID domain  
ENSORLP00000014356   4.84e-31   58-172   ARID domain  
ENSORLP00000014562   1.26e-34   49-156   ARID domain  
ENSORLP00000015667   6.41e-34   302-405   ARID domain  
ENSORLP00000016413   1.44e-21   587-694   ARID domain  
ENSORLP00000018006   3.01e-30   58-168   ARID domain  
ENSORLP00000018507   2.75e-29   60-174   ARID domain  
ENSORLP00000018511   2.49e-30   55-176   ARID domain  
ENSORLP00000018513   3.14e-27   1-89   ARID domain  
ENSORLP00000018794   1.44e-29   53-167   ARID domain  
ENSORLP00000021704   1.05e-36   1-115   ARID domain  
ENSORLP00000022975   2.49e-31   307-400   ARID domain  

Xiphophorus maculatus 76_4.4.2 has 18 significant domains in 18 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSXMAP00000001880   8.5e-34   47-156   ARID domain  
ENSXMAP00000002616   1.06e-38   193-317   ARID domain  
ENSXMAP00000003405   1.57e-29   60-179   ARID domain  
ENSXMAP00000003655   1.7e-21   482-588   ARID domain  
ENSXMAP00000004574   2.22e-31   68-180   ARID domain  
ENSXMAP00000004926   7.06e-32   309-419   ARID domain  
ENSXMAP00000006361   7.59e-31   433-541   ARID domain  
ENSXMAP00000006567   5.23e-33   306-405   ARID domain  
ENSXMAP00000007405   2.35e-36   214-328   ARID domain  
ENSXMAP00000008984   4.19e-35   13-115   ARID domain  
ENSXMAP00000009979   1.96e-29   650-761   ARID domain  
ENSXMAP00000010758   1.31e-28   919-1031   ARID domain  
ENSXMAP00000011505   2.75e-29   60-173   ARID domain  
ENSXMAP00000011954   8.63e-32   16-118   ARID domain  
ENSXMAP00000012073   1.96e-29   915-1028   ARID domain  
ENSXMAP00000016833   5.1e-36   247-361   ARID domain  
ENSXMAP00000018248   2.09e-33   311-429   ARID domain  
ENSXMAP00000018338   5.36e-30   59-176   ARID domain  

Poecilia formosa 76 has 18 significant domains in 18 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPFOP00000002273   2.09e-29   935-1048   ARID domain  
ENSPFOP00000002676   1.27e-38   193-317   ARID domain  
ENSPFOP00000002786   9.42e-30   968-1085   ARID domain  
ENSPFOP00000007131   2.22e-29   60-173   ARID domain  
ENSPFOP00000007382   1.23e-30   872-980   ARID domain  
ENSPFOP00000009814   1.15e-28   924-1036   ARID domain  
ENSPFOP00000010012   1.57e-31   198-296   ARID domain  
ENSPFOP00000010723   5.23e-31   68-179   ARID domain  
ENSPFOP00000011367   4.45e-33   13-114   ARID domain  
ENSPFOP00000012178   4.32e-36   211-325   ARID domain  
ENSPFOP00000012393   1.96e-33   309-430   ARID domain  
ENSPFOP00000012791   8.5e-34   47-156   ARID domain  
ENSPFOP00000014618   2.09e-21   686-792   ARID domain  
ENSPFOP00000015417   1.23e-29   60-178   ARID domain  
ENSPFOP00000015475   4.97e-36   247-361   ARID domain  
ENSPFOP00000015634   3.14e-29   734-846   ARID domain  
ENSPFOP00000018747   8.24e-33   309-420   ARID domain  
ENSPFOP00000019553   4.71e-33   309-409   ARID domain  

Oreochromis niloticus 76_1.0 has 27 significant domains in 27 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSONIP00000001125   1.83e-32   320-428   ARID domain  
ENSONIP00000003322   1.96e-21   510-616   ARID domain  
ENSONIP00000003692   4.45e-36   247-361   ARID domain  
ENSONIP00000003693   3.79e-36   216-330   ARID domain  
ENSONIP00000003694   3.53e-36   172-286   ARID domain  
ENSONIP00000008540   1.83e-29   908-1021   ARID domain  
ENSONIP00000009601   1.29e-29   919-1032   ARID domain  
ENSONIP00000010162   3.14e-31   500-608   ARID domain  
ENSONIP00000010598   1.03e-35   241-355   ARID domain  
ENSONIP00000010599   7.19e-37   182-303   ARID domain  
ENSONIP00000012262   2.49e-31   58-170   ARID domain  
ENSONIP00000012263   2.62e-31   54-165   ARID domain  
ENSONIP00000012699   4.84e-33   304-403   ARID domain  
ENSONIP00000013381   4.45e-34   49-156   ARID domain  
ENSONIP00000013862   3.79e-33   306-415   ARID domain  
ENSONIP00000014982   5.1e-32   13-114   ARID domain  
ENSONIP00000014983   4.97e-32   13-114   ARID domain  
ENSONIP00000015956   1.19e-38   199-323   ARID domain  
ENSONIP00000015957   1.16e-38   192-316   ARID domain  
ENSONIP00000017505   9.94e-38   203-324   ARID domain  
ENSONIP00000021125   3.92e-29   60-174   ARID domain  
ENSONIP00000021126   2.88e-29   53-169   ARID domain  
ENSONIP00000021218   1.96e-31   58-178   ARID domain  
ENSONIP00000023658   1.7e-30   859-970   ARID domain  
ENSONIP00000023659   1.7e-30   855-966   ARID domain  
ENSONIP00000023660   1.57e-30   772-883   ARID domain  
ENSONIP00000024196   7.59e-30   60-180   ARID domain  

Astyanax mexicanus 76 has 21 significant domains in 21 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSAMXP00000000419   6.67e-34   298-406   ARID domain  
ENSAMXP00000001037   3.92e-36   266-380   ARID domain  
ENSAMXP00000003731   4.06e-33   303-405   ARID domain  
ENSAMXP00000005534   1.83e-33   66-171   ARID domain  
ENSAMXP00000007087   8.37e-32   283-379   ARID domain  
ENSAMXP00000011698   1.7e-21   663-771   ARID domain  
ENSAMXP00000012345   4.45e-33   315-431   ARID domain  
ENSAMXP00000012550   1.57e-32   12-116   ARID domain  
ENSAMXP00000013190   8.5e-31   786-904   ARID domain  
ENSAMXP00000014011   2.35e-29   1006-1119   ARID domain  
ENSAMXP00000014012   2.35e-29   998-1111   ARID domain  
ENSAMXP00000018139   9.94e-22   593-701   ARID domain  
ENSAMXP00000018348   2.09e-29   61-171   ARID domain  
ENSAMXP00000018755   1.19e-31   815-927   ARID domain  
ENSAMXP00000018824   9.03e-31   417-529   ARID domain  
ENSAMXP00000019198   1.96e-29   60-173   ARID domain  
ENSAMXP00000019644   3.14e-38   206-329   ARID domain  
ENSAMXP00000020013   1.57e-37   234-355   ARID domain  
ENSAMXP00000020847   1.31e-29   978-1091   ARID domain  
ENSAMXP00000021376   2.88e-36   253-368   ARID domain  
ENSAMXP00000025438   3.4e-31   60-173   ARID domain  
 
Weak hits:
ENSAMXP00000007374   0.0301   44-95   ARID domain  
ENSAMXP00000007375   0.0275   22-73   ARID domain  

Danio rerio 76_9 has 32 significant domains in 32 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSDARP00000011701   1.28e-31   14-114   ARID domain  
ENSDARP00000023794   3.66e-29   60-173   ARID domain  
ENSDARP00000054091   6.8e-33   209-316   ARID domain  
ENSDARP00000058728   4.71e-30   53-167   ARID domain  
ENSDARP00000064411   8.63e-34   303-412   ARID domain  
ENSDARP00000078698   7.72e-30   973-1086   ARID domain  
ENSDARP00000080768   7.06e-22   549-656   ARID domain  
ENSDARP00000084269   6.28e-21   653-760   ARID domain  
ENSDARP00000088317   1.31e-37   216-338   ARID domain  
ENSDARP00000089428   1.96e-30   60-181   ARID domain  
ENSDARP00000094005   3.79e-34   303-412   ARID domain  
ENSDARP00000094246   4.71e-36   183-297   ARID domain  
ENSDARP00000095133   1.7e-36   186-307   ARID domain  
ENSDARP00000099617   1.28e-31   14-114   ARID domain  
ENSDARP00000102232   2.22e-29   60-175   ARID domain  
ENSDARP00000102999   7.72e-34   66-173   ARID domain  
ENSDARP00000107839   3.92e-33   305-409   ARID domain  
ENSDARP00000108603   9.94e-34   303-412   ARID domain  
ENSDARP00000110667   1.96e-30   60-181   ARID domain  
ENSDARP00000111639   1.57e-31   281-381   ARID domain  
ENSDARP00000112863   4.58e-28   303-387   ARID domain  
ENSDARP00000114402   8.76e-17   640-762   ARID domain  
ENSDARP00000114989   1.7e-35   10-124   ARID domain  
ENSDARP00000118182   7.72e-30   973-1086   ARID domain  
ENSDARP00000118392   2.35e-29   953-1066   ARID domain  
ENSDARP00000119606   2.62e-31   896-1012   ARID domain  
ENSDARP00000122212   4.71e-30   60-174   ARID domain  
ENSDARP00000123549   1.57e-31   274-374   ARID domain  
ENSDARP00000124215   4.19e-31   9-122   ARID domain  
ENSDARP00000124652   2.22e-29   11-126   ARID domain  
ENSDARP00000124925   4.84e-30   11-124   ARID domain  
ENSDARP00000126363   9.94e-34   303-412   ARID domain  

Oikopleura dioica has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
GSOIDT00007509001   2.09e-37   188-310   ARID domain  
GSOIDT00009751001   1.57e-21   61-165   ARID domain  
GSOIDT00012150001   6.54e-32   19-135   ARID domain  
GSOIDT00015559001   1.31e-31   21-132   ARID domain  
GSOIDT00015903001   0.00000000000107   433-485   ARID domain  

Ciona savignyi 76_2.0 has 11 significant domains in 11 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCSAVP00000000871   2.22e-27   60-167   ARID domain  
ENSCSAVP00000000872   1.57e-28   57-165   ARID domain  
ENSCSAVP00000000873   9.29e-29   55-165   ARID domain  
ENSCSAVP00000000874   6.54e-28   57-167   ARID domain  
ENSCSAVP00000000876   9.16e-29   67-177   ARID domain  
ENSCSAVP00000000877   1.05e-27   55-165   ARID domain  
ENSCSAVP00000000878   8.76e-28   55-166   ARID domain  
ENSCSAVP00000000879   3.01e-27   53-163   ARID domain  
ENSCSAVP00000000880   1.96e-27   48-155   ARID domain  
ENSCSAVP00000009980   0.00000000562   8-50   ARID domain  
ENSCSAVP00000014825   4.97e-37   219-341   ARID domain  

Ciona intestinalis 76 has 5 significant domains in 5 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCINP00000021703   7.46e-26   9-103   ARID domain  
ENSCINP00000023772   9.16e-31   314-412   ARID domain  
ENSCINP00000024499   1.57e-29   35-125   ARID domain  
ENSCINP00000031824   2.75e-30   57-165   ARID domain  
ENSCINP00000036568   2.88e-37   232-354   ARID domain  
 
Weak hits:
ENSCINP00000000993   0.0384   61-96   ARID domain  
ENSCINP00000012442   0.0235   2-22   ARID domain  

Strongylocentrotus purpuratus v3.1 has 9 significant domains in 9 proteins.

     

Sequence ID   Evalue   Region   Family  
SPU_003500   0.0000000000994   58-116   ARID domain  
SPU_005718   1.01e-36   187-308   ARID domain  
SPU_009801   1.28e-22   287-361   ARID domain  
SPU_011640   4.58e-32   172-275   ARID domain  
SPU_017106   1.01e-36   187-308   ARID domain  
SPU_020287   3.27e-30   11-114   ARID domain  
SPU_023530   3.79e-29   1329-1442   ARID domain  
SPU_023640   6.02e-21   1186-1292   ARID domain  
SPU_025601   1.01e-36   187-308   ARID domain  
 
Weak hits:
SPU_000964   0.00916   24-61   ARID domain  
SPU_015205   0.0785   198-237   ARID domain  
SPU_020569   0.00706   160-200   ARID domain  

Adineta vaga has 16 significant domains in 16 proteins.

     

Sequence ID   Evalue   Region   Family  
GSADVT00003760001   1.44e-36   39-161   ARID domain  
GSADVT00004350001   6.8e-26   327-423   ARID domain  
GSADVT00006623001   1.07e-25   58-168   ARID domain  
GSADVT00010454001   4.32e-26   327-423   ARID domain  
GSADVT00011082001   0.00000000000000968   287-344   ARID domain  
GSADVT00012688001   1.44e-19   235-356   ARID domain  
GSADVT00018682001   3.4e-37   17-139   ARID domain  
GSADVT00027268001   3.27e-19   560-669   ARID domain  
GSADVT00028297001   1.16e-36   107-228   ARID domain  
GSADVT00036033001   2.09e-25   311-409   ARID domain  
GSADVT00037525001   4.84e-20   144-265   ARID domain  
GSADVT00039899001   1.57e-27   66-161   ARID domain  
GSADVT00045770001   7.46e-28   79-177   ARID domain  
GSADVT00048030001   2.22e-36   16-135   ARID domain  
GSADVT00049180001   1.44e-25   58-168   ARID domain  
GSADVT00058634001   2.88e-19   126-235   ARID domain  

Octopus bimaculoides 280 has 14 significant domains in 14 proteins.

     

Sequence ID   Evalue   Region   Family  
Ocbimv22018108m.p   1.57e-16   444-541   ARID domain  
Ocbimv22018109m.p   1.57e-16   444-541   ARID domain  
Ocbimv22018110m.p   1.57e-16   444-541   ARID domain  
Ocbimv22018111m.p   1.57e-16   444-541   ARID domain  
Ocbimv22018112m.p   1.7e-16   444-541   ARID domain  
Ocbimv22018113m.p   1.7e-16   444-541   ARID domain  
Ocbimv22018114m.p   1.7e-16   444-541   ARID domain  
Ocbimv22018115m.p   1.7e-16   444-541   ARID domain  
Ocbimv22018673m.p   3.92e-30   293-398   ARID domain  
Ocbimv22026349m.p   2.49e-27   1-89   ARID domain  
Ocbimv22026350m.p   1.83e-23   2-80   ARID domain  
Ocbimv22026989m.p   4.97e-30   324-422   ARID domain  
Ocbimv22032810m.p   4.45e-30   188-304   ARID domain  
Ocbimv22039568m.p   1.29e-24   678-786   ARID domain  

Crassostrea gigas 22 has 7 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
EKC19962   0.00000000000000497   1224-1343   ARID domain  
EKC20059   2.88e-30   882-989   ARID domain  
EKC30576   3.92e-34   173-294   ARID domain  
EKC30603   0.00000000000432   353-425   ARID domain  
EKC32936   1.83e-22   11-65,105-149   ARID domain  
EKC38036   3.01e-29   59-168   ARID domain  
EKC38538   5.89e-30   300-401   ARID domain  
 
Weak hits:
EKC33087   0.000196   211-244   ARID domain  
EKC38574   0.00562   39-96   ARID domain  

Lottia gigantea has 6 significant domains in 6 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Lotgi1|119273|e_gw1.30.298.1   1.83e-25   288-371   ARID domain  
jgi|Lotgi1|131492|e_gw1.74.68.1   2.35e-31   3-109   ARID domain  
jgi|Lotgi1|205701|estExt_fgenesh2_pm.C_sca_40039   3.01e-27   60-168   ARID domain  
jgi|Lotgi1|235330|estExt_fgenesh2_pg.C_sca_630040   5.23e-22   1459-1571   ARID domain  
jgi|Lotgi1|237297|estExt_fgenesh2_pg.C_sca_1010042   8.63e-30   12-115   ARID domain  
jgi|Lotgi1|93934|gw1.34.309.1   7.33e-36   2-114   ARID domain  
 
Weak hits:
jgi|Lotgi1|176521|fgenesh2_pg.C_sca_1878000001   0.000157   4-34   ARID domain  
jgi|Lotgi1|228597|estExt_fgenesh2_pg.C_sca_30204   0.068   267-316   ARID domain  

Helobdella robusta has 10 significant domains in 10 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Helro1|122964   6.41e-37   9-124   ARID domain  
jgi|Helro1|126316   7.59e-28   1-88   ARID domain  
jgi|Helro1|137241   9.29e-31   4-112   ARID domain  
jgi|Helro1|192533   3.4e-30   382-497   ARID domain  
jgi|Helro1|194466   0.00000000000602   59-153   ARID domain  
jgi|Helro1|62031   5.49e-25   3-81   ARID domain  
jgi|Helro1|64754   5.89e-37   2-115   ARID domain  
jgi|Helro1|69268   1.05e-27   59-168   ARID domain  
jgi|Helro1|75856   5.23e-27   62-174   ARID domain  
jgi|Helro1|76486   2.22e-31   4-115   ARID domain  

Capitella sp. I has 7 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Capca1|108943|e_gw1.166.14.1   1.7e-17   13-68   ARID domain  
jgi|Capca1|146844|e_gw1.151.77.1   5.76e-24   2-81   ARID domain  
jgi|Capca1|147496|e_gw1.514.28.1   1.44e-29   60-171   ARID domain  
jgi|Capca1|198746|fgenesh1_pg.C_scaffold_16000095   7.19e-18   255-330   ARID domain  
jgi|Capca1|220448|estExt_fgenesh1_pg.C_150088   9.55e-31   346-445   ARID domain  
jgi|Capca1|226262|estExt_fgenesh1_pg.C_550034   3.01e-29   631-739   ARID domain  
jgi|Capca1|64285|gw1.153.44.1   1.57e-37   18-133   ARID domain  

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Select to display   Genome       Domains   Proteins
No Yes ALL   28697 28697
No Yes Homo sapiens 76_38 Human 50 50
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 15 15
No Yes Gorilla gorilla 76_3.1 Western gorilla 21 21
No Yes Pongo abelii 76_2 Sumatran orangutan 15 15
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 15 15
No Yes Papio anubis 76 Olive baboon 15 15
No Yes Macaca mulatta 76_1 Rhesus monkey 25 25
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 36 36
No Yes Otolemur garnettii 76_3 Small-eared galago 13 13
No Yes Microcebus murinus 76_1 Gray mouse lemur 12 12
No Yes Rattus norvegicus 76_5.0 Norway rat 18 18
No Yes Mus musculus 76_38 House mouse 47 46
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 13 13
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 12 12
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 13 13
No Yes Cavia porcellus 76_3 Domestic guinea pig 10 10
No Yes Oryctolagus cuniculus 76_2 Rabbit 14 14
No Yes Ochotona princeps 76 American pika 10 10
No Yes Tupaia belangeri 76 Northern tree shrew 10 10
No Yes Sus scrofa 76_10.2 Pig 14 14
No Yes Bos taurus 76_3.1 Cattle 16 16
No Yes Ovis aries 76_3.1 Sheep 15 15
No Yes Vicugna pacos 76_1 Alpaca 9 9
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 14 14
No Yes Mustela putorius furo 76_1.0 Domestic ferret 15 15
No Yes Ailuropoda melanoleuca 76_1 Giant panda 15 15
No Yes Canis familiaris 76_3.1 Dog 19 19
No Yes Felis catus 76_6.2 Domestic cat 14 14
No Yes Equus caballus 76_2 Horse 15 15
No Yes Myotis lucifugus 76_2.0 Little brown bat 15 15
No Yes Pteropus vampyrus 76_1 Large flying fox 13 13
No Yes Sorex araneus 76_1 European shrew 11 11
No Yes Erinaceus europaeus 76 Western European hedgehog 11 11
No Yes Procavia capensis 76_1 Cape rock hyrax 14 14
No Yes Loxodonta africana 76_3 African savanna elephant 24 24
No Yes Echinops telfairi 76 Small Madagascar hedgehog 10 10
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 16 16
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 10 10
No Yes Macropus eugenii 76_1.0 Tammar wallaby 14 14
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 16 16
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 12 12
No Yes Ornithorhynchus anatinus 76_5 Platypus 15 15
No Yes Saccoglossus kowalevskii v3.0   30 30
No Yes Petromyzon marinus 76_7.0 Sea lamprey 9 9
No Yes Meleagris gallopavo 76_2 Turkey 13 13
No Yes Gallus gallus 76_4 Chicken 13 13
No Yes Anas platyrhynchos 76_1.0 Mallard 11 11
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 12 12
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 13 13
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 12 12
No Yes Anolis carolinensis 76_2.0 Green anole 15 15
No Yes Xenopus laevis African clawed frog 10 10
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 15 15
No Yes Latimeria chalumnae 76_1 Coelacanth 18 18
No Yes Lepisosteus oculatus 76 Spotted gar 19 19
No Yes Gadus morhua 76_1 Atlantic cod 19 19
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 19 19
No Yes Takifugu rubripes 76_4 Torafugu 53 53
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 15 15
No Yes Oryzias latipes 76_1 Japanese medaka 16 16
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 18 18
No Yes Poecilia formosa 76 Amazon molly 18 18
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 27 27
No Yes Astyanax mexicanus 76 Mexican tetra 21 21
No Yes Danio rerio 76_9 Zebrafish 32 32
No Yes Oikopleura dioica   5 5
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 11 11
No Yes Ciona intestinalis 76 Vase tunicate 5 5
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 9 9
No Yes Adineta vaga   16 16
No Yes Octopus bimaculoides 280   14 14
No Yes Crassostrea gigas 22 Pacific oyster 7 7
No Yes Lottia gigantea Owl limpet 6 6
No Yes Helobdella robusta   10 10
No Yes Capitella sp. I   7 7
No Yes Danaus plexippus OGS1.0 Monarch butterfly 8 8
No Yes Heliconius melpomene Postman butterfly 7 7
No Yes Bombyx mori Domestic silkworm 4 4
No Yes Nasonia vitripennis Jewel wasp 6 6
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 13 13
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 7 7
No Yes Linepithema humile v1.1 Argentine ant 7 7
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 7 7
No Yes Solenopsis invicta v.2.2.3 Red fire ant 6 6
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 7 7
No Yes Atta cephalotes v1.1   7 7
No Yes Camponotus floridanus v3.3 Florida carpenter ant 7 7
No Yes Lucilia cuprina Australian sheep blowfly 6 6
No Yes Drosophila grimshawi 1.3   7 7
No Yes Drosophila willistoni 1.3   13 13
No Yes Drosophila pseudoobscura 2.13   6 6
No Yes Drosophila persimilis 1.3   5 5
No Yes Drosophila suzukii   5 5
No Yes Drosophila yakuba 1.3   6 6
No Yes Drosophila simulans 1.3   6 6
No Yes Drosophila sechellia 1.3   7 7
No Yes Drosophila melanogaster 76_5 Fruit fly 15 15
No Yes Drosophila erecta 1.3   6 6
No Yes Drosophila ananassae 1.3   6 6
No Yes Drosophila virilis 1.2   6 6
No Yes Drosophila mojavensis 1.3   7 7
No Yes Megaselia scalaris 22   4 4
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 5 5
No Yes Culex pipiens quinquefasciatus Southern house mosquito 10 10
No Yes Anopheles darlingi 22 American malaria mosquito 5 5
No Yes Anopheles gambiae 49_3j African malaria mosquito 9 9
No Yes Tribolium castaneum 3.0 Red flour beetle 7 7
No Yes Pediculus humanus corporis (Early assembly) Human body louse 5 5
No Yes Acyrthosiphon pisum Pea aphid 7 7
No Yes Rhodnius prolixus 22   7 7
No Yes Daphnia pulex Common water flea 6 6
No Yes Strigamia maritima 22   7 7
No Yes Sarcoptes scabiei   5 5
No Yes Tetranychus urticae Two-spotted spider mite 11 11
No Yes Ixodes scapularis (Preliminary) Black-legged tick 5 5
No Yes Pristionchus pacificus   5 5
No Yes Meloidogyne incognita Southern root-knot nematode 6 6
No Yes Meloidogyne hapla   4 4
No Yes Onchocerca volvulus 22   4 4
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 12 12
No Yes Caenorhabditis japonica   4 4
No Yes Caenorhabditis brenneri   9 9
No Yes Caenorhabditis remanei   6 6
No Yes Caenorhabditis elegans 76_235 Roundworm 6 6
No Yes Caenorhabditis briggsae 2   5 5
No Yes Trichinella spiralis 22   5 5
No Yes Hymenolepis microstoma   7 7
No Yes Echinococcus multilocularis   6 6
No Yes Echinococcus granulosus   6 6
No Yes Taenia solium Pork tapeworm 6 6
No Yes Schistosoma mansoni   8 8
No Yes Mnemiopsis leidyi Sea walnut 5 5
No Yes Thelohanellus kitauei   2 2
No Yes Acropora digitifera v1.0   8 8
No Yes Nematostella vectensis 1.0 Starlet sea anemone 6 6
No Yes Hydra vulgaris   6 6
No Yes Amphimedon queenslandica   5 5
No Yes Trichoplax adhaerens   6 6
No Yes Proterospongia sp. ATCC 50818   2 2
No Yes Monosiga brevicollis   2 2
No Yes Sphaeroforma arctica JP610   2 2
No Yes Capsaspora owczarzaki ATCC 30864   3 3
No Yes Conidiobolus coronatus NRRL28638 v1.0   4 4
No Yes Mortierella verticillata NRRL 6337   4 4
No Yes Phycomyces blakesleeanus   4 4
No Yes Rhizopus oryzae RA 99-880   2 2
No Yes Mucor circinelloides   2 2
No Yes Rhizomucor miehei CAU432   3 3
No Yes Malassezia globosa CBS 7966   6 6
No Yes Sporisorium reilianum 22   3 3
No Yes Ustilago maydis   3 3
No Yes Mixia osmundae IAM 14324 v1.0   3 3
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   3 3
No Yes Puccinia graminis f. sp. tritici CRL 75-36-700-3   3 3
No Yes Melampsora laricis-populina   2 2
No Yes Rhodotorula graminis WP1 v1.0   3 3
No Yes Sporobolomyces roseus IAM 13481   1 1
No Yes Microbotryum violaceum 22   5 5
No Yes Wallemia sebi v1.0   3 3
No Yes Sphaerobolus stellatus v1.0   6 6
No Yes Piloderma croceum F 1598 v1.0   4 4
No Yes Serpula lacrymans var. lacrymans S7.9   2 2
No Yes Coniophora puteana   4 4
No Yes Hydnomerulius pinastri v2.0   5 5
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   4 4
No Yes Pisolithus microcarpus 441 v1.0   3 3
No Yes Pisolithus tinctorius Marx 270 v1.0   3 3
No Yes Scleroderma citrinum Foug A v1.0   4 4
No Yes Coprinopsis cinerea okayama7 130 v3   3 3
No Yes Pleurotus ostreatus Oyster mushroom 3 3
No Yes Amanita thiersii Skay4041 v1.0   3 3
No Yes Amanita muscaria Koide v1.0 Fly agaric 4 4
No Yes Galerina marginata v1.0   3 3
No Yes Hebeloma cylindrosporum h7 v2.0   3 3
No Yes Laccaria bicolor S238N-H82   6 5
No Yes Agaricus bisporus var. bisporus   3 3
No Yes Schizophyllum commune   3 3
No Yes Stereum hirsutum FP-91666 SS1 v1.0   3 3
No Yes Heterobasidion annosum   1 1
No Yes Gloeophyllum trabeumv1.0   3 3
No Yes Punctularia strigosozonata v1.0   4 4
No Yes Sebacina vermifera MAFF 305830 v1.0   2 2
No Yes Fomitiporia mediterranea v1.0   3 3
No Yes Tulasnella calospora AL13/4D v1.0   7 7
No Yes Postia placenta   6 6
No Yes Wolfiporia cocos MD-104 SS10 v1.0   5 5
No Yes Fomitopsis pinicolav1.0   6 6
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   6 6
No Yes Phanerochaete chrysosporium RP-78 2.1   3 3
No Yes Dichomitus squalens   5 5
No Yes Trametes versicolor v1.0   3 3
No Yes Tremella mesenterica Witches' butter 4 4
No Yes Daldinia eschscholzii EC12 v1.0   4 4
No Yes Apiospora montagnei NRRL 25634 v1.0   4 4
No Yes Magnaporthe poae ATCC 64411 22   3 3
No Yes Magnaporthe grisea 70-15   4 4
No Yes Podospora anserina   3 3
No Yes Sporotrichum thermophile ATCC 42464   4 4
No Yes Thielavia terrestris NRRL 8126   4 4
No Yes Chaetomium globosum CBS 148.51   4 4
No Yes Neurospora tetrasperma   4 4
No Yes Neurospora discreta FGSC 8579   4 4
No Yes Neurospora crassa OR74A   4 4
No Yes Cryphonectria parasitica Chestnut blight fungus 4 4
No Yes Verticillium albo-atrum VaMs.102   4 4
No Yes Verticillium dahliae VdLs.17   4 4
No Yes Acremonium alcalophilumv 1.0   4 4
No Yes Glomerella graminicola 22   4 4
No Yes Fusarium graminearum   2 2
No Yes Nectria haematococca mpVI   3 3
No Yes Fusarium oxysporum f. sp. lycopersici 4286   3 3
No Yes Fusarium verticillioides 7600   2 2
No Yes Trichoderma asperellum CBS 433.97 v1.0   5 5
No Yes Trichoderma atroviride   4 4
No Yes Trichoderma citrinoviride v1.0   4 4
No Yes Trichoderma reesei 1.2   3 3
No Yes Trichoderma virens Gv29-8   3 3
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   4 4
No Yes Trichoderma harzianum CBS 226.95 v1.0   4 4
No Yes Amorphotheca resinae v1.0 Creosote fungus 4 4
No Yes Botrytis cinerea B05.10   4 4
No Yes Sclerotinia sclerotiorum   4 4
No Yes Blumeria graminis 22   4 4
No Yes Didymella exigua CBS 183.55 v1.0   3 3
No Yes Leptosphaeria maculans 22   3 3
No Yes Setosphaeria turcica v1.0   3 3
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   3 3
No Yes Cochliobolus victoriae FI3 v1.0   3 3
No Yes Cochliobolus carbonum 26-R-13 v1.0   3 3
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 3 3
No Yes Alternaria brassicicola   3 3
No Yes Cochliobolus lunatus m118 v2.0   3 3
No Yes Pyrenophora teres f. teres 22   3 3
No Yes Pyrenophora tritici-repentis   3 3
No Yes Stagonospora nodorum   3 3
No Yes Mycosphaerella graminicola IPO323   3 3
No Yes Zasmidium cellare ATCC 36951 v1.0   3 3
No Yes Dothistroma septosporum   3 3
No Yes Septoria musiva v1.0   4 4
No Yes Mycosphaerella fijiensis CIRAD86   3 3
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   3 3
No Yes Paracoccidioides brasiliensis Pb18   2 2
No Yes Coccidioides posadasii RMSCC 3488   2 2
No Yes Coccidioides immitis RS   3 3
No Yes Ajellomyces dermatitidis SLH14081   2 2
No Yes Histoplasma capsulatum class NAmI strain WU24   2 2
No Yes Microsporum canis CBS 113480   3 3
No Yes Trichophyton equinum CBS 127.97   3 3
No Yes Trichophyton verrucosum HKI 0517   3 3
No Yes Arthroderma benhamiae CBS 112371   3 3
No Yes Trichophyton tonsurans CBS 112818   3 3
No Yes Trichophyton rubrum CBS 118892   3 3
No Yes Uncinocarpus reesii 1704   3 3
No Yes Aspergillus zonatus v1.0   2 2
No Yes Penicillium chrysogenum Wisconsin 54-1255   2 2
No Yes Penicillium chrysogenum v1.0   2 2
No Yes Aspergillus acidus v1.0   2 2
No Yes Aspergillus fumigatus Af293   2 2
No Yes Aspergillus brasiliensis v1.0   2 2
No Yes Aspergillus nidulans FGSC A4   2 2
No Yes Aspergillus sydowii v1.0   2 2
No Yes Aspergillus versicolor v1.0   2 2
No Yes Aspergillus glaucus   2 2
No Yes Aspergillus carbonarius ITEM 5010   2 2
No Yes Neosartorya fischeri NRRL 181   2 2
No Yes Aspergillus terreus NIH2624   2 2
No Yes Aspergillus tubingensis v1.0   2 2
No Yes Aspergillus wentii v1.0   2 2
No Yes Aspergillus oryzae RIB40   2 2
No Yes Aspergillus niger 22   2 2
No Yes Aspergillus niger ATCC 1015   2 2
No Yes Aspergillus flavus NRRL3357   2 2
No Yes Aspergillus clavatus NRRL 1   2 2
No Yes Penicillium marneffei ATCC 18224   2 2
No Yes Tuber melanosporum Mel28 22   2 2
No Yes Tuber melanosporum Vittad Perigord truffle 2 2
No Yes Hansenula polymorpha v2.0   1 1
No Yes Dekkera bruxellensis CBS 2499 v2.0   2 2
No Yes Pichia membranifaciensv1.0   2 2
No Yes Candida tanzawaensis NRRL Y-17324 v1.0   3 3
No Yes Candida dubliniensis CD36   3 3
No Yes Candida tropicalis MYA-3404   3 3
No Yes Candida parapsilosis   3 3
No Yes Candida albicans SC5314   2 2
No Yes Lodderomyces elongisporus NRRL YB-4239   2 2
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   3 3
No Yes Pichia stipitis CBS 6054   3 3
No Yes Candida guilliermondii ATCC 6260   2 2
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   3 3
No Yes Debaromyces hansenii   3 3
No Yes Wickerhamomyces anomalus   2 2
No Yes Pichia pastoris GS115   2 2
No Yes Yarrowia lipolytica CLIB122   3 3
No Yes Candida lusitaniae ATCC 42720   2 2
No Yes Metschnikowia bicuspidata NRRL YB-4993 v1.0   3 3
No Yes Vanderwaltozyma polyspora DSM 70294   1 1
No Yes Candida glabrata CBS138   1 1
No Yes Kluyveromyces thermotolerans CBS 6340   2 2
No Yes Lachancea kluyveri   2 2
No Yes Kluyveromyces waltii   2 2
No Yes Ashbya gossypii ATCC 10895   2 2
No Yes Zygosaccharomyces rouxii   2 2
No Yes Saccharomyces mikatae MIT   2 2
No Yes Saccharomyces paradoxus MIT   2 2
No Yes Saccharomyces cerevisiae 76 Baker's yeast 2 2
No Yes Saccharomyces bayanus MIT   2 2
No Yes Kluyveromyces lactis   2 2
No Yes Schizosaccharomyces cryophilus OY26 22   4 4
No Yes Schizosaccharomyces octosporus yFS286   4 4
No Yes Schizosaccharomyces japonicus yFS275   4 4
No Yes Schizosaccharomyces pombe Fission yeast 4 4
No Yes Catenaria anguillulae PL171 v1.0   2 2
No Yes Allomyces macrogynus ATCC 38327   3 3
No Yes Spizellomyces punctatus DAOM BR117   4 4
No Yes Dictyostelium discoideum   2 2
No Yes Dictyostelium purpureum   2 2
No Yes Selaginella moellendorffii   16 16
No Yes Pinus taeda Loblolly pine 15 15
No Yes Picea abies Norway spruce 10 10
No Yes Eucalyptus grandis v201 Rose gum 14 14
No Yes Theobroma cacao B97-61/B2 v1 Cacao 12 12
No Yes Gossypium raimondii v221   46 46
No Yes Citrus clementina v165   17 17
No Yes Citrus sinensis v154 Sweet orange 31 31
No Yes Thellungiella halophila v173   15 15
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 17 17
No Yes Capsella rubella v183   16 16
No Yes Arabidopsis lyrata Lyrate rockcress 8 8
No Yes Arabidopsis thaliana 10 Thale cress 13 13
No Yes Carica papaya Papaya 8 8
No Yes Medicago truncatula Barrel medic 33 33
No Yes Phaseolus vulgaris v186 French bean 17 17
No Yes Glycine max v109 Soybean 22 22
No Yes Cucumis sativus v122 Cucumber 14 14
No Yes Fragaria vesca Wild strawberry 12 12
No Yes Malus domestica v196 Apple 24 24
No Yes Prunus persica v139 Peach 9 9
No Yes Linum usitatissimum v200 Flax 15 15
No Yes Manihot esculenta v147 Cassava 13 13
No Yes Populus trichocarpa v156 Black cottonwood 14 14
No Yes Vitis vinifera Wine grape 10 10
No Yes Mimulus guttatus v140 Spotted monkey flower 11 11
No Yes Solanum lycopersicum v.2.3 Tomato 14 14
No Yes Solanum tuberosum Potato 15 15
No Yes Actinidia chinensis Hongyang   16 16
No Yes Aquilegia coerulea v195   13 13
No Yes Triticum urartu 22   5 5
No Yes Triticum aestivum 22 Bread wheat 14 14
No Yes Aegilops tauschii 22   5 5
No Yes Brachypodium distachyon Stiff brome 12 12
No Yes Oryza barthii 22 African wild rice 9 9
No Yes Oryza meridionalis 22   12 12
No Yes Oryza glumaepatula 22   14 14
No Yes Oryza glaberrima African rice 7 7
No Yes Oryza punctata 22   14 14
No Yes Oryza nivara 22   13 13
No Yes Oryza brachyantha 22 Malo sina 8 8
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 17 17
No Yes Oryza sativa v193 Rice 16 16
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 13 13
No Yes Panicum virgatum v202 Switchgrass 12 12
No Yes Setaria italica v164 Foxtail millet 11 11
No Yes Zea mays subsp. mays Maize 18 18
No Yes Zea mays v181 Maize 16 16
No Yes Sorghum bicolor Sorghum 7 7
No Yes Musa balbisiana Balbis banana 14 14
No Yes Musa acuminata 22 Wild Malaysian banana 12 12
No Yes Amborella trichopoda 22   8 8
No Yes Physcomitrella patens   8 8
No Yes Coccomyxa subellipsoidea sp. C-169 v2   11 11
No Yes Asterochloris sp. Cgr/DA1pho v1.0   2 2
No Yes Chlorella variabilis sp. NC64A   3 3
No Yes Chlorella vulgaris   10 10
No Yes Volvox carteri f. nagariensis   4 4
No Yes Volvox carteri v199   3 3
No Yes Chlamydomonas reinhardtii 4.0   5 5
No Yes Ostreococcus sp. RCC809   3 3
No Yes Ostreococcus lucimarinus CCE9901   7 7
No Yes Ostreococcus tauri   1 1
No Yes Bathycoccus prasinos   4 4
No Yes Micromonas sp. RCC299   5 5
No Yes Micromonas pusilla CCMP1545 v3.0   8 8
No Yes Cyanidioschyzon merolae strain 10D 22   4 4
No Yes Cyanidioschyzon merolae   4 4
No Yes Porphyridium purpureum 02_2012   3 3
No Yes Thecamonas trahens ATCC 50062   2 2
No Yes Bigelowiella natans CCMP2755 22   9 9
No Yes Giardia lamblia 2.3   2 2
No Yes Cyanophora paradoxa   2 2
No Yes Ectocarpus siliculosus   2 2
No Yes Albugo laibachii 22   2 2
No Yes Pythium iwayamai DAOM BR242034 22   2 2
No Yes Pythium arrhenomanes ATCC 12531 22   2 2
No Yes Pythium ultimum v1.7-2   2 2
No Yes Pythium aphanidermatum DAOM BR444 22   2 2
No Yes Pythium irregulare DAOM BR486 22   1 1
No Yes Pythium vexans DAOM BR484 22   2 2
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 2 2
No Yes Phytophthora sojae 1.1   2 2
No Yes Phytophthora infestans T30-4   3 3
No Yes Phytophthora capsici   1 1
No Yes Hyaloperonospora arabidopsidis 22   2 2
No Yes Paramecium tetraurelia   2 2
No Yes Tetrahymena thermophila SB210 1   2 2
No Yes Ichthyophthirius multifiliis strain G5   1 1
No Yes Cryptosporidium hominis   1 1
No Yes Cryptosporidium muris   1 1
No Yes Cryptosporidium parvum Iowa II   1 1
No Yes Neospora caninum   1 1
No Yes Toxoplasma gondii VEG   1 1
No Yes Toxoplasma gondii ME49   1 1
No Yes Toxoplasma gondii GT1   1 1
No Yes Plasmodium falciparum 3D7   1 1
No Yes Plasmodium vivax SaI-1 7.0   1 1
No Yes Plasmodium knowlesi strain H   1 1
No Yes Plasmodium chabaudi   1 1
No Yes Plasmodium berghei ANKA   1 1
No Yes Naegleria gruberi   2 2
No Yes Guillardia theta CCMP2712 v1.0   6 5
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 18 18
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 12 12
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 9 9
No Yes Ascaris suum Victoria/Ghent Pig roundworm 4 4
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 5 5
No Yes Cryptococcus neoformans var. grubii H99   2 2
No Yes Cryptococcus neoformans B-3501A   2 2
No Yes Cryptococcus neoformans JEC21   2 2
No Yes Paracoccidioides brasiliensis Pb01   2 2
No Yes Paracoccidioides brasiliensis Pb03   3 3
No Yes Coccidioides posadasii str. Silveira   2 2
No Yes Coccidioides immitis RMSCC 3703   3 3
No Yes Coccidioides immitis RMSCC 2394   2 2
No Yes Coccidioides immitis H538.4   1 1
No Yes Ajellomyces dermatitidis ER-3   2 2
No Yes Histoplasma capsulatum H143   1 1
No Yes Histoplasma capsulatum H88   2 2
No Yes Histoplasma capsulatum G186AR   2 2
No Yes Aspergillus fumigatus A1163   2 2
No Yes Candida albicans WO-1   2 2
No Yes Saccharomyces cerevisiae UC5   2 2
No Yes Saccharomyces cerevisiae PW5   1 1
No Yes Saccharomyces cerevisiae CBS7960   1 1
No Yes Saccharomyces cerevisiae T7   2 2
No Yes Saccharomyces cerevisiae FostersB   2 2
No Yes Saccharomyces cerevisiae FostersO   1 1
No Yes Saccharomyces cerevisiae VL3   2 2
No Yes Saccharomyces cerevisiae LalvinQA23   2 2
No Yes Saccharomyces cerevisiae AWRI796   1 1
No Yes Saccharomyces cerevisiae Sigma1278b   2 2
No Yes Saccharomyces cerevisiae W303   2 2
No Yes Saccharomyces cerevisiae JAY291   2 2
No Yes Saccharomyces cerevisiae YJM789   2 2
No Yes Saccharomyces cerevisiae YJM789   2 2
No Yes Saccharomyces cerevisiae RM11-1a   2 2
No Yes Saccharomyces cerevisiae RM11-1a   2 2
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 2 2
No Yes Schizosaccharomyces pombe 972h-   4 4
No Yes Batrachochytrium dendrobatidis JEL423   5 5
No Yes Batrachochytrium dendrobatidis JAM81   4 4
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 12 12
No Yes Hordeum vulgare 22 Domesticated barley 12 12
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 8 8
No Yes Neospora caninum Nc-Liverpool 6.2   1 1
No Yes Plasmodium falciparum HB3   1 1
No Yes Plasmodium falciparum Dd2   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 55 55
No Yes Homo sapiens (NCBI version) Human 24 24
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 16 15
No Yes Loa loa v3.3 (Request) Eye worm 5 5
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 6 6
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 5 5
No Yes Moniliophthora perniciosa FA553 (Genome survey)   2 2
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Lotus japonicus (Early assembly)   12 12
No Yes Malus x domestica (Duplicate) Apple 24 24
No Yes Ricinus communis (Early assembly) Castor bean 10 10
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   21 21
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 14 14
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 14 14
No Yes Phoenix dactylifera (Early draft) Date palm 12 12
No Yes Homo sapiens 69_37 Human 15 15
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 15 15
No Yes Gorilla gorilla 69_3.1 Western gorilla 14 14
No Yes Pongo abelii 69_2 Sumatran orangutan 14 14
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 14 14
No Yes Macaca mulatta 69_1 Rhesus monkey 13 13
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 16 16
No Yes Otolemur garnettii 69_3 Small-eared galago 13 13
No Yes Microcebus murinus 69_1 Gray mouse lemur 12 12
No Yes Rattus norvegicus 69_3.4 Norway rat 13 13
No Yes Mus musculus 69_38 House mouse 16 15
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 13 13
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 12 12
No Yes Cavia porcellus 69_3 Domestic guinea pig 10 10
No Yes Oryctolagus cuniculus 69_2 Rabbit 13 13
No Yes Ochotona princeps 69 American pika 10 10
No Yes Tupaia belangeri 69 Northern tree shrew 10 10
No Yes Sus scrofa 69_10.2 Pig 12 12
No Yes Bos taurus 69_3.1 Cattle 13 13
No Yes Vicugna pacos 69_1 Alpaca 9 9
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 14 14
No Yes Mustela putorius furo 69_1.0 Domestic ferret 14 14
No Yes Ailuropoda melanoleuca 69_1 Giant panda 14 14
No Yes Canis familiaris 69_3.1 Dog 14 14
No Yes Felis catus 69 Domestic cat 10 10
No Yes Equus caballus 69_2 Horse 12 12
No Yes Myotis lucifugus 69_2.0 Little brown bat 14 14
No Yes Pteropus vampyrus 69_1 Large flying fox 13 13
No Yes Sorex araneus 69_1 European shrew 11 11
No Yes Erinaceus europaeus 69 Western European hedgehog 11 11
No Yes Procavia capensis 69_1 Cape rock hyrax 14 14
No Yes Loxodonta africana 69_3 African savanna elephant 13 13
No Yes Echinops telfairi 69 Small Madagascar hedgehog 10 10
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 10 10
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 10 10
No Yes Macropus eugenii 69_1.0 Tammar wallaby 14 14
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 13 13
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 12 12
No Yes Ornithorhynchus anatinus 69_5 Platypus 14 14
No Yes Petromyzon marinus 69_7.0 Sea lamprey 8 8
No Yes Meleagris gallopavo 69_2 Turkey 12 12
No Yes Gallus gallus 69_2 Chicken 11 11
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 12 12
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 11 11
No Yes Anolis carolinensis 69_2.0 Green anole 13 13
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 12 12
No Yes Latimeria chalumnae 69_1 Coelacanth 12 12
No Yes Gadus morhua 69_1 Atlantic cod 15 15
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 15 15
No Yes Takifugu rubripes 69_4 Torafugu 17 17
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 14 14
No Yes Oryzias latipes 69_1 Japanese medaka 15 15
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 18 18
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 18 18
No Yes Danio rerio 69_9 Zebrafish 18 18
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 3 3
No Yes Ciona intestinalis 69 Vase tunicate 5 5
No Yes Drosophila melanogaster 69_5 Fruit fly 6 6
No Yes Caenorhabditis elegans 69_215 Roundworm 5 5
No Yes Saccharomyces cerevisiae 69_4 Baker's yeast 2 2
No Yes Arabidopsis thaliana 10 Thale cress 10 10
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes NCBI 2017_08 genome   11804 11782
No Yes Protozoadb 2010_08 (Protozoadb)   17 17
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   2 2
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   698 691
No Yes Uniprot 2018_03 genome   9686 9654
No Yes Global Ocean Sampling Expedition (GOS)   7 7
No Yes PDB chains (SCOP 1.75) (PDB)   5 5
No Yes Protein Data Bank (all PDB sequenc)   25 25
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   60 60
No Yes TargetDB (Targets)   24 24

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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