SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


N-terminal Zn binding domain of HIV integrase superfamily domain assignments
in
Phycomyces blakesleeanus

Network of domain occurrence in all genomes



No domain assignments for these genomes.


Add assignments from groups of genomes

View all assignments containing a N-terminal Zn binding domain of HIV integrase domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   49210 49210
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 1 1
No Yes Oryctolagus cuniculus 76_2 Rabbit 3 3
No Yes Ovis aries 76_3.1 Sheep 12 12
No Yes Felis catus 76_6.2 Domestic cat 4 4
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 1 1
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 2 2
No Yes Gallus gallus 76_4 Chicken 1 1
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 11 11
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 1 1
No Yes Trypanosoma congolense 2.4   1 1
No Yes Plasmodium yoelii ssp. yoelii 1   1 1
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 7 7
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 1 1
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 2 2
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 11 11
No Yes NCBI 2017_08 genome   733 729
No Yes Protozoadb 2010_08 (Protozoadb)   1 1
No Yes STRING v9.0.5 (STRING)   27 27
No Yes Uniprot 2018_03 genome   37868 37867
No Yes NCBI viral sequences (Viral)   20 20
No Yes PDB chains (SCOP 1.75) (PDB)   6 6
No Yes Protein Data Bank (all PDB sequenc)   116 116
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   168 168
No Yes UniProt viral sequences (Viral)   10157 10157

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]