SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


Aspartate receptor, ligand-binding domain superfamily domain assignments
in
Caenorhabditis japonica


No domain assignments for these genomes.


Add assignments from groups of genomes

View all assignments containing a Aspartate receptor, ligand-binding domain domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   96242 96242
No Yes Monosiga brevicollis   1 1
No Yes Clostridium novyi NT   1 1
No Yes Alistipes finegoldii DSM 17242   1 1
No Yes Desulfovibrio africanus str. Walvis Bay   1 1
No Yes Burkholderia phytofirmans PsJN   6 6
No Yes Burkholderia phymatum STM815   6 6
No Yes Burkholderia xenovorans LB400   8 8
No Yes Cupriavidus taiwanensis LMG 19424   1 1
No Yes Cupriavidus metallidurans CH34   2 2
No Yes Cupriavidus necator N-1   1 1
No Yes Ralstonia eutropha H16   2 2
No Yes Ralstonia pickettii 12D   5 5
No Yes Ralstonia solanacearum CFBP2957   6 6
No Yes Burkholderia sp. RPE64   2 2
No Yes Burkholderia sp. CCGE1002   4 4
No Yes Burkholderia thailandensis E264   4 4
No Yes Burkholderia pseudomallei 1106a   4 4
No Yes Burkholderia mallei SAVP1   3 3
No Yes Burkholderia ambifaria AMMD   4 4
No Yes Burkholderia cenocepacia HI2424   4 4
No Yes Burkholderia multivorans ATCC 17616   3 3
No Yes Burkholderia vietnamiensis G4   5 5
No Yes Burkholderia gladioli BSR3   3 3
No Yes Burkholderia glumae BGR1   4 4
No Yes Herminiimonas arsenicoxydans   1 1
No Yes Janthinobacterium sp. Marseille   2 2
No Yes Herbaspirillum seropedicae SmR1   1 1
No Yes Pusillimonas sp. T7-7   1 1
No Yes Bordetella petrii DSM 12804   3 3
No Yes Bordetella avium 197N   5 5
No Yes Bordetella pertussis Tohama I   5 5
No Yes Bordetella parapertussis 12822   4 4
No Yes Bordetella bronchiseptica RB50   5 5
No Yes Achromobacter xylosoxidans A8   7 7
No Yes Achromobacter xylosoxidans   9 9
No Yes Methylobacillus flagellatus KT   1 1
No Yes Methylobacterium radiotolerans JCM 2831   1 1
No Yes Nitrobacter hamburgensis X14   1 1
No Yes Aeromonas veronii B565   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Idiomarina loihiensis L2TR   1 1
No Yes Shewanella putrefaciens CN-32   1 1
No Yes Chromohalobacter salexigens DSM 3043   2 2
No Yes Halomonas elongata DSM 2581   1 1
No Yes Photorhabdus asymbiotica   2 2
No Yes Photorhabdus luminescens subsp. laumondii TTO1   2 2
No Yes Xenorhabdus bovienii SS-2004   2 2
No Yes Xenorhabdus nematophila ATCC 19061   2 2
No Yes Providencia stuartii MRSN 2154   3 3
No Yes Proteus mirabilis HI4320   4 4
No Yes Edwardsiella ictaluri 93-146   6 6
No Yes Edwardsiella tarda EIB202   6 6
No Yes Rahnella sp. Y9602   7 7
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   7 7
No Yes Yersinia pseudotuberculosis IP 31758   4 4
No Yes Yersinia pestis Pestoides F   4 4
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   6 6
No Yes Serratia sp. AS12   3 3
No Yes Serratia sp. ATCC 39006   7 7
No Yes Serratia plymuthica AS9   3 3
No Yes Serratia proteamaculans 568   4 4
No Yes Dickeya dadantii Ech703   11 11
No Yes Dickeya zeae Ech1591   13 13
No Yes Pectobacterium wasabiae WPP163   10 10
No Yes Pectobacterium sp. SCC3193   10 10
No Yes Pectobacterium atrosepticum SCRI1043   11 11
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   11 11
No Yes Pantoea sp. At-9b   9 9
No Yes Pantoea vagans C9-1   7 7
No Yes Pantoea ananatis LMG 20103   8 8
No Yes Erwinia tasmaniensis Et1/99   7 7
No Yes Erwinia sp. Ejp617   7 7
No Yes Erwinia billingiae Eb661   9 9
No Yes Erwinia pyrifoliae Ep1/96   7 7
No Yes Erwinia amylovora ATCC 49946   4 4
No Yes Cronobacter turicensis z3032   9 9
No Yes Cronobacter sakazakii ES15   9 9
No Yes Enterobacteriaceae bacterium strain FGI 57   4 4
No Yes Shigella sonnei Ss046   3 3
No Yes Shigella flexneri 5 str. 8401   4 4
No Yes Shigella dysenteriae Sd197   1 1
No Yes Shigella boydii CDC 3083-94   3 3
No Yes Salmonella bongori NCTC 12419   4 4
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   4 4
No Yes Enterobacter aerogenes KCTC 2190   2 2
No Yes Escherichia fergusonii ATCC 35469   2 2
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   4 4
No Yes Enterobacter sp. R4-368   12 12
No Yes Enterobacter sp. 638   9 9
No Yes Enterobacter asburiae LF7a   10 10
No Yes Enterobacter cloacae subsp. dissolvens SDM   9 9
No Yes Citrobacter rodentium ICC168   4 4
No Yes Citrobacter koseri ATCC BAA-895   6 6
No Yes Pseudomonas sp. TKP   1 1
No Yes Pseudomonas syringae pv. tomato str. DC3000   1 1
No Yes Pseudomonas fulva 12-X   1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 4 4
No Yes Alistipes shahii WAL 8301   1 1
No Yes Burkholderia phenoliruptrix BR3459a   6 6
No Yes Pandoraea pnomenusa 3kgm   3 3
No Yes Ralstonia pickettii 12J   4 4
No Yes Ralstonia solanacearum FQY_4   7 7
No Yes Ralstonia solanacearum Po82   6 6
No Yes Ralstonia solanacearum PSI07   7 7
No Yes Ralstonia solanacearum CMR15   6 6
No Yes Ralstonia solanacearum GMI1000   6 6
No Yes Burkholderia sp. YI23   2 2
No Yes Burkholderia sp. CCGE1003   8 8
No Yes Burkholderia sp. CCGE1001   6 6
No Yes Burkholderia sp. KJ006   5 5
No Yes Burkholderia thailandensis MSMB121   4 4
No Yes Burkholderia pseudomallei MSHR305   4 4
No Yes Burkholderia pseudomallei NCTC 13179   4 4
No Yes Burkholderia pseudomallei BPC006   4 4
No Yes Burkholderia pseudomallei 1026b   4 4
No Yes Burkholderia pseudomallei MSHR346   2 2
No Yes Burkholderia pseudomallei 668   4 4
No Yes Burkholderia pseudomallei 1710b   4 4
No Yes Burkholderia pseudomallei K96243   4 4
No Yes Burkholderia mallei NCTC 10229   3 3
No Yes Burkholderia mallei NCTC 10247   2 2
No Yes Burkholderia mallei ATCC 23344   3 3
No Yes Burkholderia lata   4 4
No Yes Burkholderia ambifaria MC40-6   4 4
No Yes Burkholderia cenocepacia MC0-3   5 5
No Yes Burkholderia cenocepacia AU 1054   4 4
No Yes Burkholderia cenocepacia J2315   3 3
No Yes Burkholderia multivorans ATCC 17616   3 3
No Yes Burkholderia cepacia GG4   3 3
No Yes Bordetella pertussis CS   5 5
No Yes Bordetella parapertussis 18323   5 5
No Yes Bordetella parapertussis Bpp5   2 2
No Yes Bordetella bronchiseptica MO149   6 6
No Yes Bordetella bronchiseptica 253   6 6
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   7 7
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Idiomarina loihiensis GSL 199   1 1
No Yes Shewanella sp. W3-18-1   1 1
No Yes Shewanella putrefaciens 200   1 1
No Yes Alcanivorax dieselolei B5   2 2
No Yes Proteus mirabilis BB2000   4 4
No Yes Morganella morganii subsp. morganii KT   2 2
No Yes Edwardsiella tarda C07-087   6 6
No Yes Edwardsiella tarda FL6-60   6 6
No Yes Rahnella aquatilis HX2   7 7
No Yes Yersinia pseudotuberculosis PB1/+   4 4
No Yes Yersinia pseudotuberculosis YPIII   3 3
No Yes Yersinia pseudotuberculosis IP 32953   4 4
No Yes Yersinia pestis biovar Microtus str. 91001   3 3
No Yes Yersinia pestis A1122   3 3
No Yes Yersinia pestis Z176003   4 4
No Yes Yersinia pestis D182038   4 4
No Yes Yersinia pestis D106004   4 4
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   3 3
No Yes Yersinia pestis Nepal516   4 4
No Yes Yersinia pestis Antiqua   4 4
No Yes Yersinia pestis Angola   3 3
No Yes Yersinia pestis CO92   2 2
No Yes Yersinia pestis KIM10+   3 3
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   5 5
No Yes Yersinia enterocolitica subsp. palearctica Y11   5 5
No Yes Serratia sp. AS13   3 3
No Yes Serratia plymuthica S13   3 3
No Yes Serratia plymuthica 4Rx13   3 3
No Yes Serratia marcescens FGI94   3 3
No Yes Serratia marcescens WW4   5 5
No Yes Serratia liquefaciens ATCC 27592   4 4
No Yes Dickeya dadantii Ech586   14 14
No Yes Dickeya dadantii 3937   14 14
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   9 9
No Yes Pantoea ananatis LMG 5342   8 8
No Yes Pantoea ananatis PA13   8 8
No Yes Pantoea ananatis AJ13355   8 8
No Yes Erwinia pyrifoliae DSM 12163   7 7
No Yes Erwinia amylovora CFBP1430   4 4
No Yes Cronobacter sakazakii CMCC 45402   9 9
No Yes Cronobacter sakazakii SP291   10 10
No Yes Cronobacter sakazakii ATCC BAA-894   9 9
No Yes Shigella sonnei 53G   4 4
No Yes Shigella flexneri 2002017   4 4
No Yes Shigella flexneri 2a str. 2457T   4 4
No Yes Shigella flexneri 2a str. 301   4 4
No Yes Shigella dysenteriae 1617   2 2
No Yes Shigella boydii Sb227   1 1
No Yes Salmonella bongori N268-08   4 4
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   3 3
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   4 4
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   4 4
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   4 4
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   4 4
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   4 4
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   4 4
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   4 4
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   4 4
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   4 4
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   4 4
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   3 3
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   2 2
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   2 2
No Yes Salmonella enterica serovar Bovismorbificans genomics   4 4
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   4 4
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   4 4
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   3 3
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   4 4
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   4 4
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   2 2
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   2 2
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   4 4
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   4 4
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   4 4
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   4 4
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   4 4
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   4 4
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   4 4
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   4 4
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   3 3
No Yes Enterobacter aerogenes EA1509E   2 2
No Yes Escherichia coli E24377A   4 4
No Yes Escherichia coli E. coli PMV-1   2 2
No Yes Escherichia coli JJ1886   2 2
No Yes Escherichia coli LY180   4 4
No Yes Escherichia coli APEC O78   4 4
No Yes Escherichia coli O7:K1 str. CE10   3 3
No Yes Escherichia coli O104:H4 str. 2009EL-2050   4 4
No Yes Escherichia coli O104:H4 str. 2009EL-2071   4 4
No Yes Escherichia coli O104:H4 str. 2011C-3493   4 4
No Yes Escherichia coli NA114   2 2
No Yes Escherichia coli P12b   3 3
No Yes Escherichia coli str. 'clone D i2'   2 2
No Yes Escherichia coli str. 'clone D i14'   2 2
No Yes Escherichia coli UM146   2 2
No Yes Escherichia coli 042   4 4
No Yes Escherichia coli Xuzhou21   4 4
No Yes Escherichia coli IHE3034   2 2
No Yes Escherichia coli UMNK88   4 4
No Yes Escherichia coli O83:H1 str. NRG 857C   2 2
No Yes Escherichia coli ABU 83972   2 2
No Yes Escherichia coli KO11FL   4 4
No Yes Escherichia coli KO11FL   4 4
No Yes Escherichia coli LF82   2 2
No Yes Escherichia coli ED1a   2 2
No Yes Escherichia coli IAI39   2 2
No Yes Escherichia coli UMN026   4 4
No Yes Escherichia coli 55989   4 4
No Yes Escherichia coli S88   2 2
No Yes Escherichia coli IAI1   4 4
No Yes Escherichia coli W   4 4
No Yes Escherichia coli W   4 4
No Yes Escherichia coli DH1   4 4
No Yes Escherichia coli DH1   4 4
No Yes Escherichia coli ATCC 8739   4 4
No Yes Escherichia coli BL21(DE3)   4 4
No Yes Escherichia coli BL21(DE3)   4 4
No Yes Escherichia coli SMS-3-5   4 4
No Yes Escherichia coli SE15   2 2
No Yes Escherichia coli SE11   4 4
No Yes Escherichia coli APEC O1   2 2
No Yes Escherichia coli O103:H2 str. 12009   3 3
No Yes Escherichia coli UTI89   2 2
No Yes Escherichia coli 536   2 2
No Yes Escherichia coli HS   4 4
No Yes Escherichia coli ETEC H10407   4 4
No Yes Escherichia coli O55:H7 str. RM12579   3 3
No Yes Escherichia coli O55:H7 str. CB9615   4 4
No Yes Escherichia coli O26:H11 str. 11368   4 4
No Yes Escherichia coli CFT073   2 2
No Yes Escherichia coli O111:H- str. 11128   4 4
No Yes Escherichia coli O127:H6 str. E2348/69   2 2
No Yes Escherichia coli O157:H7 str. TW14359   4 4
No Yes Escherichia coli O157:H7 str. EC4115   4 4
No Yes Escherichia coli O157:H7 str. Sakai   4 4
No Yes Escherichia coli O157:H7 str. EDL933   4 4
No Yes Escherichia coli str. K-12 substr. MDS42   1 1
No Yes Escherichia coli BW2952   4 4
No Yes Escherichia coli str. K-12 substr. MG1655   4 4
No Yes Escherichia coli str. K-12 substr. W3110   4 4
No Yes Escherichia coli str. K-12 substr. DH10B   3 3
No Yes Escherichia coli B str. REL606   4 4
No Yes Enterobacter cloacae SCF1   6 6
No Yes Enterobacter cloacae EcWSU1   9 9
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   9 9
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   6 6
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   9 9
No Yes Pseudomonas syringae pv. phaseolicola 1448A   1 1
No Yes Pseudomonas syringae pv. syringae B728a   2 2
No Yes Pseudomonas stutzeri DSM 10701   1 1
No Yes Pseudomonas monteilii SB3101   1 1
No Yes Pseudomonas putida H8234   1 1
No Yes Pseudomonas putida HB3267   1 1
No Yes Pseudomonas putida S16   1 1
No Yes 1_050719N (meta-genome)   1 1
No Yes 3_050719R (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   6 6
No Yes 5_050719P (meta-genome)   6 6
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   54 54
No Yes Combined (meta-genome)   65 65
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   92 92
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   12 12
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   14 14
No Yes Dump bottom (Dump bottom) (meta-genome)   4 4
No Yes Dump top (Dump top) (meta-genome)   2 2
No Yes Endophytic microbiome from Rice (meta-genome)   13 13
No Yes Fungus garden combined (combined) (meta-genome)   53 53
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   111 111
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   99 99
No Yes Human Gut Community Subject 8 (meta-genome)   1 1
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   7 7
No Yes NCBI 2017_08 genome   85454 85453
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   4 4
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   6 6
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   4 4
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   5 5
No Yes STRING v9.0.5 (STRING)   514 514
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   3 3
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   7654 7653
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Global Ocean Sampling Expedition (GOS)   16 16
No Yes NCBI plasmid sequences (Plasmids)   42 42
No Yes PDB chains (SCOP 1.75) (PDB)   4 4
No Yes Protein Data Bank (all PDB sequenc)   23 23
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   57 57
No Yes TargetDB (Targets)   7 7
No Yes The Salmonella enterica Pan-genome (meta-genome)   114 114

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]