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lambda integrase-like, N-terminal domain family domain assignments
in
all bacterial genomes

Assignment details

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25 selected genomes have 25 significant domains in 25 proteins.

Showing genomes 1 to 25 of 214
  1 2 3 4 5 6 7 8 9   Next Last

Tolumonas auensis DSM 9187 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|237807746|ref|YP_002892186.1|   9.81e-36   0.0001   4-100   1a0p A:3-100  

Aeromonas veronii B565 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|330828608|ref|YP_004391560.1|   2.75e-36   0.0001   10-106   1a0p A:3-100  
 
Weak hits:
gi|330827985|ref|YP_004390937.1|   0.00000000451   0.0053   27-118   1a0p A:3-100  
gi|330829689|ref|YP_004392641.1|   8.04e-22   0.0055   2-117   1a0p A:3-100  
gi|330831608|ref|YP_004394560.1|   0.000000647   0.008   47-145   1a0p A:3-100  

Aeromonas salmonicida subsp. salmonicida A449 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|145298066|ref|YP_001140907.1|   3.34e-37   0.0000995   10-106   1a0p A:3-100  
 
Weak hits:
gi|145299020|ref|YP_001141861.1|   4.51e-21   0.006   29-146   1a0p A:3-100  

Aeromonas hydrophila subsp. hydrophila ATCC 7966 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|117620205|ref|YP_857765.1|   4.51e-37   0.0001   6-102   1a0p A:3-100  
 
Weak hits:
gi|117619677|ref|YP_855009.1|   0.00000000188   0.0052   28-118   1a0p A:3-100  
gi|117620891|ref|YP_856783.1|   2.94e-22   0.0066   28-146   1a0p A:3-100  

Vibrio sp. Ex25 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|262395210|ref|YP_003287064.1|   1.28e-33   0.0001   11-107   1a0p A:3-100  
 
Weak hits:
gi|262392887|ref|YP_003284741.1|   0.00000000000451   0.0024   16-107   1a0p A:3-100  
gi|262393940|ref|YP_003285794.1|   0.0122   0.01   13-81   4crx A:20-129  

Vibrio harveyi ATCC BAA-1116 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|156973275|ref|YP_001444182.1|   1.43e-33   0.0001   11-107   1a0p A:3-100  
 
Weak hits:
gi|156972655|ref|YP_001443562.1|   0.0000000000216   0.0025   16-107   1a0p A:3-100  

Vibrio parahaemolyticus RIMD 2210633 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|28897283|ref|NP_796888.1|   1.1e-33   0.0000843   11-107   1a0p A:3-100  
 
Weak hits:
gi|28898639|ref|NP_798244.1|   0.000628   0.014   13-82   4crx A:20-129  
gi|28899755|ref|NP_799360.1|   0.00000000000451   0.0024   16-107   1a0p A:3-100  

Vibrio splendidus LGP32 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|218708546|ref|YP_002416167.1|   3.92e-34   0.0001   26-122   1a0p A:3-100  
 
Weak hits:
gi|218676509|ref|YP_002395328.1|   1.02e-18   0.013   30-120   4crx A:20-129  

Vibrio anguillarum 775 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|336125084|ref|YP_004567132.1|   4.32e-36   0.0000715   8-104   1a0p A:3-100  
 
Weak hits:
gi|336125441|ref|YP_004577397.1|   1.1e-17   0.0077   33-125   4crx A:20-129  

Vibrio vulnificus MO6-24/O has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|320157372|ref|YP_004189751.1|   2.55e-34   0.0000907   11-107   1a0p A:3-100  
 
Weak hits:
gi|320154951|ref|YP_004187330.1|   0.000000000001   0.0017   16-107   1a0p A:3-100  

Photobacterium profundum SS9 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|54307771|ref|YP_128791.1|   2.75e-34   0.0000798   1-93   1a0p A:3-100  
 
Weak hits:
gi|54302608|ref|YP_132601.1|   1.47e-25   0.0028   37-132   4crx A:20-129  

Psychromonas ingrahamii 37 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|119946910|ref|YP_944590.1|   3.92e-31   0.0001   4-100   1a0p A:3-100  
 
Weak hits:
gi|119946224|ref|YP_943904.1|   0.0353   0.0075   40-67   1a0p A:3-100  

Nitrosococcus watsonii C-113 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|300114666|ref|YP_003761241.1|   9.81e-35   0.0000728   12-106   1a0p A:3-100  
 
Weak hits:
gi|300114084|ref|YP_003760659.1|   9.42e-27   0.0069   24-120   4crx A:20-129  
gi|300115008|ref|YP_003761583.1|   2.16e-17   0.0052   12-87   4crx A:20-129  

Nitrosococcus oceani ATCC 19707 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|77165718|ref|YP_344243.1|   2.16e-34   0.0000587   12-106   1a0p A:3-100  
 
Weak hits:
gi|77165175|ref|YP_343700.1|   7.46e-27   0.0069   24-120   4crx A:20-129  

Photorhabdus asymbiotica has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|253988692|ref|YP_003040048.1|   2.75e-34   0.000033   11-105   1a0p A:3-100  
 
Weak hits:
gi|253988429|ref|YP_003039785.1|   0.000000785   0.0058   18-118   1a0p A:3-100  
gi|253988435|ref|YP_003039791.1|   0.000000785   0.0058   18-118   1a0p A:3-100  
gi|253990473|ref|YP_003041829.1|   0.000000785   0.0058   18-118   1a0p A:3-100  
gi|253991592|ref|YP_003042948.1|   0.000000785   0.007   11-102   1a0p A:3-100  

Photorhabdus luminescens subsp. laumondii TTO1 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|37527425|ref|NP_930769.1|   9.81e-35   0.0000319   10-105   1a0p A:3-100  
 
Weak hits:
gi|37528455|ref|NP_931800.1|   0.0000000192   0.0042   11-103   1a0p A:3-100  

Xenorhabdus bovienii SS-2004 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|290476402|ref|YP_003469307.1|   1.06e-33   0.0000336   25-120   1a0p A:3-100  
 
Weak hits:
gi|290477110|ref|YP_003470023.1|   0.00000000392   0.0066   12-103   1a0p A:3-100  

Xenorhabdus nematophila ATCC 19061 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|300722127|ref|YP_003711410.1|   7.85e-34   0.0000314   30-125   1a0p A:3-100  
 
Weak hits:
gi|300721450|ref|YP_003710725.1|   0.00000000194   0.0047   12-104   1a0p A:3-100  

Providencia stuartii MRSN 2154 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386742107|ref|YP_006215286.1|   2.94e-33   0.0000274   7-102   1a0p A:3-100  
 
Weak hits:
gi|386743711|ref|YP_006216890.1|   0.00000000051   0.0025   16-108   1a0p A:3-100  
gi|386744897|ref|YP_006218076.1|   0.0184   0.0063   89-167   1a0p A:3-100  

Edwardsiella ictaluri 93-146 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|238921200|ref|YP_002934715.1|   1.41e-34   0.0000232   5-101   1a0p A:3-100  
 
Weak hits:
gi|238918092|ref|YP_002931606.1|   0.000000000314   0.0042   10-99   1a0p A:3-100  

Edwardsiella tarda EIB202 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|269140272|ref|YP_003296973.1|   4.9e-35   0.0000187   5-101   1a0p A:3-100  
 
Weak hits:
gi|269137482|ref|YP_003294182.1|   0.0000000000726   0.0039   12-102   1a0p A:3-100  

Rahnella sp. Y9602 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|322831506|ref|YP_004211533.1|   6.47e-34   0.0000248   25-121   1a0p A:3-100  
 
Weak hits:
gi|322834929|ref|YP_004214956.1|   0.00000000549   0.004   10-103   1a0p A:3-100  
gi|322836480|ref|YP_004215857.1|   1.16e-17   0.0003   50-151   4crx A:20-129  

Rahnella aquatilis CIP 78.65 = ATCC 33071 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|383188741|ref|YP_005198869.1|   6.47e-34   0.0000248   25-121   1a0p A:3-100  
 
Weak hits:
gi|383192114|ref|YP_005202242.1|   0.0000000022   0.0037   10-103   1a0p A:3-100  
gi|383192361|ref|YP_005202488.1|   1.69e-17   0.00031   21-124   4crx A:20-129  

Yersinia pseudotuberculosis IP 31758 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|153948372|ref|YP_001399863.1|   1.29e-36   0.0000178   5-101   1a0p A:3-100  
 
Weak hits:
gi|153948314|ref|YP_001399204.1|   0.000000000051   0.0018   10-102   1a0p A:3-100  

Yersinia pestis Pestoides F has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|145597930|ref|YP_001162006.1|   1.29e-36   0.0000178   5-101   1a0p A:3-100  
 
Weak hits:
gi|145600710|ref|YP_001164786.1|   0.000000000051   0.0018   10-102   1a0p A:3-100  

  1 2 3 4 5 6 7 8 9   Next Last
Showing genomes 1 to 25 of 214

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Select to display   Genome       Domains   Proteins
No Yes ALL   22419 22419
No Yes Tolumonas auensis DSM 9187   1 1
No Yes Aeromonas veronii B565   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   1 1
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Vibrio sp. Ex25   1 1
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Vibrio parahaemolyticus RIMD 2210633   1 1
No Yes Vibrio splendidus LGP32   1 1
No Yes Vibrio anguillarum 775   1 1
No Yes Vibrio vulnificus MO6-24/O   1 1
No Yes Photobacterium profundum SS9   1 1
No Yes Psychromonas ingrahamii 37   1 1
No Yes Nitrosococcus watsonii C-113   1 1
No Yes Nitrosococcus oceani ATCC 19707   1 1
No Yes Photorhabdus asymbiotica   1 1
No Yes Photorhabdus luminescens subsp. laumondii TTO1   1 1
No Yes Xenorhabdus bovienii SS-2004   1 1
No Yes Xenorhabdus nematophila ATCC 19061   1 1
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Edwardsiella tarda EIB202   1 1
No Yes Rahnella sp. Y9602   1 1
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia pestis Pestoides F   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   1 1
No Yes Serratia sp. AS12   1 1
No Yes Serratia sp. ATCC 39006   1 1
No Yes Serratia plymuthica AS9   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Dickeya dadantii Ech703   1 1
No Yes Dickeya zeae Ech1591   1 1
No Yes Pectobacterium wasabiae WPP163   1 1
No Yes Pectobacterium sp. SCC3193   1 1
No Yes Pectobacterium atrosepticum SCRI1043   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   1 1
No Yes Sodalis glossinidius str. 'morsitans'   1 1
No Yes Erwinia billingiae Eb661   1 1
No Yes Escherichia blattae DSM 4481   1 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Cronobacter sakazakii ES15   1 1
No Yes Enterobacteriaceae bacterium strain FGI 57   1 1
No Yes Shigella sonnei Ss046   1 1
No Yes Shigella flexneri 5 str. 8401   1 1
No Yes Shigella dysenteriae Sd197   1 1
No Yes Shigella boydii CDC 3083-94   1 1
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594   1 1
No Yes Klebsiella oxytoca E718   1 1
No Yes Klebsiella variicola At-22   1 1
No Yes Enterobacter aerogenes KCTC 2190   1 1
No Yes Escherichia fergusonii ATCC 35469   1 1
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   1 1
No Yes Enterobacter sp. R4-368   1 1
No Yes Enterobacter sp. 638   1 1
No Yes Enterobacter asburiae LF7a   1 1
No Yes Enterobacter cloacae subsp. dissolvens SDM   1 1
No Yes Citrobacter rodentium ICC168   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Saccharomyces cerevisiae SGD (SGD) Baker's yeast 1 1
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Vibrio sp. EJY3   1 1
No Yes Vibrio parahaemolyticus BB22OP   1 1
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   1 1
No Yes Vibrio anguillarum Listonella anguillarum M3   1 1
No Yes Vibrio vulnificus CMCP6   1 1
No Yes Vibrio vulnificus YJ016   1 1
No Yes Edwardsiella tarda C07-087   1 1
No Yes Edwardsiella tarda FL6-60   1 1
No Yes Rahnella aquatilis HX2   1 1
No Yes Yersinia pseudotuberculosis PB1/+   1 1
No Yes Yersinia pseudotuberculosis YPIII   1 1
No Yes Yersinia pseudotuberculosis IP 32953   1 1
No Yes Yersinia pestis biovar Microtus str. 91001   1 1
No Yes Yersinia pestis A1122   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   1 1
No Yes Yersinia pestis Nepal516   1 1
No Yes Yersinia pestis Antiqua   1 1
No Yes Yersinia pestis Angola   1 1
No Yes Yersinia pestis CO92   1 1
No Yes Yersinia pestis KIM10+   1 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   1 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   1 1
No Yes Serratia sp. AS13   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Serratia plymuthica 4Rx13   1 1
No Yes Serratia marcescens FGI94   1 1
No Yes Serratia marcescens WW4   1 1
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Dickeya dadantii 3937   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Cronobacter sakazakii SP291   1 1
No Yes Cronobacter sakazakii ATCC BAA-894   1 1
No Yes Raoultella ornithinolytica B6   1 1
No Yes Shigella sonnei 53G   1 1
No Yes Shigella flexneri 2002017   1 1
No Yes Shigella flexneri 2a str. 2457T   1 1
No Yes Shigella flexneri 2a str. 301   1 1
No Yes Shigella dysenteriae 1617   1 1
No Yes Shigella boydii Sb227   1 1
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736   1 1
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050   1 1
No Yes Salmonella enterica subsp. enterica serovar Enteritidis str. P125109   1 1
No Yes Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1   1 1
No Yes Salmonella enterica subsp. enterica serovar Newport str. SL254   1 1
No Yes Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. U288   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 798   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. T000240   1 1
No Yes Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. D23580   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium str. LT2   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty21a   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. CT18   1 1
No Yes Salmonella enterica subsp. enterica serovar Typhi str. Ty2   1 1
No Yes Salmonella enterica serovar Bovismorbificans genomics   1 1
No Yes Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. 24249   1 1
No Yes Salmonella enterica subsp. enterica serovar Agona str. SL483   1 1
No Yes Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601   1 1
No Yes Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150   1 1
No Yes Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. B182   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. 41578   1 1
No Yes Salmonella enterica subsp. enterica serovar Heidelberg str. SL476   1 1
No Yes Salmonella enterica subsp. enterica serovar Pullorum str. S06004   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078   1 1
No Yes Salmonella enterica subsp. enterica serovar Thompson str. RM6836   1 1
No Yes Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91   1 1
No Yes Klebsiella oxytoca KCTC 1686   1 1
No Yes Klebsiella pneumoniae 342   1 1
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   1 1
No Yes Enterobacter aerogenes EA1509E   1 1
No Yes Escherichia coli E24377A   1 1
No Yes Escherichia coli E. coli PMV-1   1 1
No Yes Escherichia coli JJ1886   1 1
No Yes Escherichia coli LY180   1 1
No Yes Escherichia coli APEC O78   1 1
No Yes Escherichia coli O7:K1 str. CE10   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2050   1 1
No Yes Escherichia coli O104:H4 str. 2009EL-2071   1 1
No Yes Escherichia coli O104:H4 str. 2011C-3493   1 1
No Yes Escherichia coli NA114   1 1
No Yes Escherichia coli P12b   1 1
No Yes Escherichia coli str. 'clone D i2'   1 1
No Yes Escherichia coli str. 'clone D i14'   1 1
No Yes Escherichia coli UM146   1 1
No Yes Escherichia coli 042   1 1
No Yes Escherichia coli Xuzhou21   1 1
No Yes Escherichia coli IHE3034   1 1
No Yes Escherichia coli UMNK88   1 1
No Yes Escherichia coli O83:H1 str. NRG 857C   1 1
No Yes Escherichia coli ABU 83972   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli KO11FL   1 1
No Yes Escherichia coli LF82   1 1
No Yes Escherichia coli ED1a   1 1
No Yes Escherichia coli IAI39   1 1
No Yes Escherichia coli UMN026   1 1
No Yes Escherichia coli 55989   1 1
No Yes Escherichia coli S88   1 1
No Yes Escherichia coli IAI1   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli W   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli DH1   1 1
No Yes Escherichia coli ATCC 8739   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli BL21(DE3)   1 1
No Yes Escherichia coli SMS-3-5   1 1
No Yes Escherichia coli SE15   1 1
No Yes Escherichia coli SE11   1 1
No Yes Escherichia coli APEC O1   1 1
No Yes Escherichia coli O103:H2 str. 12009   1 1
No Yes Escherichia coli UTI89   1 1
No Yes Escherichia coli 536   1 1
No Yes Escherichia coli HS   1 1
No Yes Escherichia coli ETEC H10407   1 1
No Yes Escherichia coli O55:H7 str. RM12579   2 2
No Yes Escherichia coli O55:H7 str. CB9615   1 1
No Yes Escherichia coli O26:H11 str. 11368   1 1
No Yes Escherichia coli CFT073   1 1
No Yes Escherichia coli O111:H- str. 11128   2 2
No Yes Escherichia coli O127:H6 str. E2348/69   1 1
No Yes Escherichia coli O157:H7 str. TW14359   1 1
No Yes Escherichia coli O157:H7 str. EC4115   1 1
No Yes Escherichia coli O157:H7 str. Sakai   1 1
No Yes Escherichia coli O157:H7 str. EDL933   1 1
No Yes Escherichia coli str. K-12 substr. MDS42   1 1
No Yes Escherichia coli BW2952   1 1
No Yes Escherichia coli str. K-12 substr. MG1655   1 1
No Yes Escherichia coli str. K-12 substr. W3110   1 1
No Yes Escherichia coli str. K-12 substr. DH10B   1 1
No Yes Escherichia coli B str. REL606   1 1
No Yes Enterobacter cloacae SCF1   1 1
No Yes Enterobacter cloacae EcWSU1   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes 4_050719Q (meta-genome)   1 1
No Yes 5_050719P (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   5 5
No Yes Combined (meta-genome)   7 7
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   8 8
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   4 4
No Yes Endophytic microbiome from Rice (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   5 5
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   11 11
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   11 11
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   20568 20568
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   95 95
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   1060 1060
No Yes Global Ocean Sampling Expedition (GOS)   2 2
No Yes NCBI plasmid sequences (Plasmids)   5 5
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   18 18
No Yes Protein Data Bank (all PDB sequenc)   75 75
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   211 211
No Yes TargetDB (Targets)   1 1
No Yes The Salmonella enterica Pan-genome (meta-genome)   33 33
No Yes UniProt viral sequences (Viral)   5 5

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