SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > Genomes > Wiscott-Aldrich syndrome protein, WASP, C-terminal domain domains in all genomes


Wiscott-Aldrich syndrome protein, WASP, C-terminal domain superfamily domain assignments
in
all genomes

Assignment details

(show help)

25 selected genomes have 93 significant domains in 51 proteins.

Showing genomes 1 to 25 of 252
  1 2 3 4 5 6 7 8 9 10 11   Next Last

Homo sapiens 76_38 has 4 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSP00000223023   4.45e-26   207-303   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  3.27e-25   382-493   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSP00000365891   7.19e-31   242-371   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  0.00000000000123   430-490   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
 
Weak hits:
ENSP00000278568   0.0458   79-182   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSP00000348696   0.0445   79-182   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSP00000433423   0.0418   79-182   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSP00000452647   0.0314   23-54   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSP00000452686   0.0418   17-48   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSP00000452708   0.0445   17-48   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSP00000452737   0.034   23-54   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSP00000453520   0.0458   17-48   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSP00000461914   0.0209   26-82   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSP00000462193   0.0209   26-82   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Pan troglodytes 76_2.1.4 has 2 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPTRP00000033635   4.45e-26   207-303   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  3.27e-25   382-493   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
 
Weak hits:
ENSPTRP00000007058   0.0353   79-182   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Gorilla gorilla 76_3.1 has 8 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSGGOP00000004531   6.15e-30   242-371   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  0.00000000000123   430-490   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSGGOP00000017210   8.11e-34   207-303   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  4.45e-23   382-488   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSGGOP00000021707   8.76e-27   242-371   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  0.00000000000115   419-479   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSGGOP00000022782   1.31e-25   178-279   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  2.62e-25   334-445   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
 
Weak hits:
ENSGGOP00000003101   0.0458   79-182   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Pongo abelii 76_2 has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPPYP00000020145   2.75e-33   207-303   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  4.45e-25   382-493   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSPPYP00000022741   4.58e-30   242-371   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
 
Weak hits:
ENSPPYP00000004237   0.0405   79-182   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Nomascus leucogenys 76_1.0 has 6 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSNLEP00000009578   6.15e-30   242-371   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  0.00000000000123   430-490   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSNLEP00000014778   1.44e-33   207-303   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  5.23e-25   382-493   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSNLEP00000023660   1.44e-33   207-303   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  6.54e-23   382-488   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
 
Weak hits:
ENSNLEP00000020301   0.0445   79-182   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Papio anubis 76 has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSPANP00000004975   1.44e-28   205-274   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSPANP00000005472   1.44e-30   236-324   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  0.00000000000111   384-444   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
 
Weak hits:
ENSPANP00000001504   0.0811   56-150   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSPANP00000006618   0.0445   79-182   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Macaca mulatta 76_1 has 4 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMMUP00000015154   2.75e-33   207-303   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  3.79e-25   382-493   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSMMUP00000025995   1.16e-29   242-371   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  0.0000602   431-481   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
 
Weak hits:
ENSMMUP00000001853   0.0445   79-182   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSMMUP00000001854   0.0458   79-182   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSMMUP00000024698   0.0432   79-182   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Callithrix jacchus 76_3.2.1 has 8 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCJAP00000004280   7.19e-30   242-326,353-373   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  0.00000000000366   432-492   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSCJAP00000032267   1.7e-33   205-301   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  4.97e-25   383-493   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSCJAP00000032291   8.89e-34   169-265   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  2.75e-25   335-440   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSCJAP00000032299   6.28e-34   167-263   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  0.000000000471   345-406   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
 
Weak hits:
ENSCJAP00000027599   0.034   79-182   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSCJAP00000027620   0.0366   79-182   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSCJAP00000050381   0.0379   79-182   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Otolemur garnettii 76_3 has 4 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOGAP00000002937   6.41e-30   242-371   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  0.000000000000262   431-491   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSOGAP00000006816   2.62e-35   207-306   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  5.62e-25   386-497   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
 
Weak hits:
ENSOGAP00000007422   0.0418   79-181   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Microcebus murinus 76_1 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMICP00000004833   0.000000000000275   382-451   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Rattus norvegicus 76_5.0 has 5 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSRNOP00000009261   9.94e-35   204-300   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  3.92e-25   378-489   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSRNOP00000050978   5.23e-31   242-321   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSRNOP00000066881   1.31e-29   242-370   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  0.00000000000209   430-491   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
 
Weak hits:
ENSRNOP00000045832   0.0536   79-181   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Mus musculus 76_38 has 4 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMUSP00000031695   9.94e-35   204-300   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  3.14e-25   378-489   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSMUSP00000033505   6.28e-31   244-321   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  0.00000000000222   447-508   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
 
Weak hits:
ENSMUSP00000031650   0.017   243-284   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSMUSP00000033040   0.0536   79-181   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSMUSP00000121888   0.0222   30-100   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Dipodomys ordii 76_1 has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSDORP00000004636   1.57e-27   246-372   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSDORP00000011087   9.68e-35   206-302   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  1.57e-23   383-493   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Ictidomys tridecemlineatus 76_2 has 4 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSTOP00000001688   9.29e-35   206-302   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  8.5e-25   381-492   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSSTOP00000020641   1.31e-27   242-310,350-371   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  0.00000000000115   431-491   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Heterocephalus glaber v1.7-2 has 4 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
HGL_H00000223023   6.54e-35   91-187   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  4.71e-25   266-377   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
HGL_H00000365891   2.09e-29   224-353   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  0.0000000000011   405-465   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
 
Weak hits:
HGL_H00000278568   0.0445   79-182   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Cavia porcellus 76_3 has 4 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCPOP00000002968   4.45e-22   330-434   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  1.31e-21   155-223,265-274   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSCPOP00000016414   5.36e-16   213-340   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  0.0000000000017   381-396,425-460   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
 
Weak hits:
ENSCPOP00000000144   0.0536   79-181   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Oryctolagus cuniculus 76_2 has 4 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOCUP00000007233   3.01e-35   209-311   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  3.14e-24   389-499   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSOCUP00000013226   4.18e-30   227-353   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  0.0000000000017   412-473   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
 
Weak hits:
ENSOCUP00000017871   0.0641   79-161   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Ochotona princeps 76 has 2 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOPRP00000003291   1.7e-23   379-484   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  6.54e-21   208-301   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
 
Weak hits:
ENSOPRP00000004012   0.0405   79-181   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Tupaia belangeri 76 has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTBEP00000000459   1.83e-16   242-370   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSTBEP00000015446   2.35e-31   207-286   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Sus scrofa 76_10.2 has 2 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSSSCP00000017588   9.94e-35   207-303   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  3.27e-25   382-493   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
 
Weak hits:
ENSSSCP00000015799   0.0536   79-181   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSSSCP00000030505   0.0536   79-181   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSSSCP00000030973   0.0157   79-181   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Bos taurus 76_3.1 has 2 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSBTAP00000006094   1.02e-34   207-303   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  5.49e-25   382-493   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
 
Weak hits:
ENSBTAP00000013448   0.0458   79-182   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Ovis aries 76_3.1 has 4 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSOARP00000001032   9.42e-35   168-264   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  1.16e-24   343-454   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSOARP00000013022   6.41e-29   242-326   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  0.000000000000523   392-452   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
 
Weak hits:
ENSOARP00000007761   0.0562   79-181   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Vicugna pacos 76_1 has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSVPAP00000002785   6.28e-34   168-264   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  6.8e-24   341-452   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSVPAP00000004767   2.09e-27   201-327   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  0.000222   412-447   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Tursiops truncatus 76_1 has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSTTRP00000000878   3.66e-34   207-303   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  4.84e-25   382-493   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSTTRP00000004331   0.0000000000011   386-446   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

Mustela putorius furo 76_1.0 has 4 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSMPUP00000006727   9.42e-35   207-303   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  4.58e-25   382-493   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSMPUP00000013542   7.59e-30   242-371   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
  0.0000000000034   429-489   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
 
Weak hits:
ENSMPUP00000004897   0.0144   16-78   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSMPUP00000009730   0.0824   351-394   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  
ENSMPUP00000015844   0.0536   79-181   Wiscott-Aldrich syndrome protein, WASP, C-terminal domain  

  1 2 3 4 5 6 7 8 9 10 11   Next Last
Showing genomes 1 to 25 of 252

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]

Add assignments from groups of genomes

View all assignments containing a Wiscott-Aldrich syndrome protein, WASP, C-terminal domain domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]

Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   4364 4364
No Yes Homo sapiens 76_38 Human 4 2
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 2 1
No Yes Gorilla gorilla 76_3.1 Western gorilla 8 4
No Yes Pongo abelii 76_2 Sumatran orangutan 3 2
No Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 6 3
No Yes Papio anubis 76 Olive baboon 3 2
No Yes Macaca mulatta 76_1 Rhesus monkey 4 2
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 8 4
No Yes Otolemur garnettii 76_3 Small-eared galago 4 2
No Yes Microcebus murinus 76_1 Gray mouse lemur 1 1
No Yes Rattus norvegicus 76_5.0 Norway rat 5 3
No Yes Mus musculus 76_38 House mouse 4 2
No Yes Dipodomys ordii 76_1 Ord's kangaroo rat 3 2
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 4 2
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 4 2
No Yes Cavia porcellus 76_3 Domestic guinea pig 4 2
No Yes Oryctolagus cuniculus 76_2 Rabbit 4 2
No Yes Ochotona princeps 76 American pika 2 1
No Yes Tupaia belangeri 76 Northern tree shrew 2 2
No Yes Sus scrofa 76_10.2 Pig 2 1
No Yes Bos taurus 76_3.1 Cattle 2 1
No Yes Ovis aries 76_3.1 Sheep 4 2
No Yes Vicugna pacos 76_1 Alpaca 3 2
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 3 2
No Yes Mustela putorius furo 76_1.0 Domestic ferret 4 2
No Yes Ailuropoda melanoleuca 76_1 Giant panda 4 2
No Yes Canis familiaris 76_3.1 Dog 4 2
No Yes Felis catus 76_6.2 Domestic cat 4 2
No Yes Equus caballus 76_2 Horse 3 2
No Yes Myotis lucifugus 76_2.0 Little brown bat 4 2
No Yes Pteropus vampyrus 76_1 Large flying fox 3 2
No Yes Sorex araneus 76_1 European shrew 3 2
No Yes Erinaceus europaeus 76 Western European hedgehog 3 2
No Yes Procavia capensis 76_1 Cape rock hyrax 4 2
No Yes Loxodonta africana 76_3 African savanna elephant 8 4
No Yes Echinops telfairi 76 Small Madagascar hedgehog 4 2
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 4 2
No Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 2 1
No Yes Macropus eugenii 76_1.0 Tammar wallaby 2 1
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 8 4
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 6 3
No Yes Ornithorhynchus anatinus 76_5 Platypus 3 2
No Yes Saccoglossus kowalevskii v3.0   5 3
No Yes Petromyzon marinus 76_7.0 Sea lamprey 5 3
No Yes Meleagris gallopavo 76_2 Turkey 2 1
No Yes Gallus gallus 76_4 Chicken 2 1
No Yes Anas platyrhynchos 76_1.0 Mallard 2 1
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 2 1
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 2 1
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 2 1
No Yes Anolis carolinensis 76_2.0 Green anole 6 3
No Yes Xenopus laevis African clawed frog 18 9
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 10 5
No Yes Latimeria chalumnae 76_1 Coelacanth 7 4
No Yes Lepisosteus oculatus 76 Spotted gar 4 2
No Yes Gadus morhua 76_1 Atlantic cod 4 2
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 6 4
No Yes Takifugu rubripes 76_4 Torafugu 14 7
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 6 3
No Yes Oryzias latipes 76_1 Japanese medaka 2 1
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 5 3
No Yes Poecilia formosa 76 Amazon molly 6 3
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 9 5
No Yes Astyanax mexicanus 76 Mexican tetra 7 4
No Yes Danio rerio 76_9 Zebrafish 9 5
No Yes Oikopleura dioica   1 1
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 6 6
No Yes Ciona intestinalis 76 Vase tunicate 1 1
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Octopus bimaculoides 280   1 1
No Yes Crassostrea gigas 22 Pacific oyster 2 2
No Yes Lottia gigantea Owl limpet 1 1
No Yes Helobdella robusta   1 1
No Yes Capitella sp. I   1 1
No Yes Danaus plexippus OGS1.0 Monarch butterfly 1 1
No Yes Heliconius melpomene Postman butterfly 1 1
No Yes Nasonia vitripennis Jewel wasp 1 1
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 1 1
No Yes Linepithema humile v1.1 Argentine ant 1 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 1 1
No Yes Atta cephalotes v1.1   1 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 1 1
No Yes Lucilia cuprina Australian sheep blowfly 1 1
No Yes Drosophila grimshawi 1.3   1 1
No Yes Drosophila willistoni 1.3   1 1
No Yes Drosophila pseudoobscura 2.13   1 1
No Yes Drosophila persimilis 1.3   1 1
No Yes Drosophila yakuba 1.3   1 1
No Yes Drosophila simulans 1.3   1 1
No Yes Drosophila sechellia 1.3   1 1
No Yes Drosophila melanogaster 76_5 Fruit fly 3 3
No Yes Drosophila erecta 1.3   1 1
No Yes Drosophila ananassae 1.3   1 1
No Yes Drosophila virilis 1.2   1 1
No Yes Drosophila mojavensis 1.3   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 1 1
No Yes Culex pipiens quinquefasciatus Southern house mosquito 1 1
No Yes Anopheles darlingi 22 American malaria mosquito 1 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 1 1
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 2 1
No Yes Acyrthosiphon pisum Pea aphid 2 1
No Yes Rhodnius prolixus 22   1 1
No Yes Daphnia pulex Common water flea 2 2
No Yes Strigamia maritima 22   2 1
No Yes Sarcoptes scabiei   1 1
No Yes Tetranychus urticae Two-spotted spider mite 1 1
No Yes Ixodes scapularis (Preliminary) Black-legged tick 1 1
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 1 1
No Yes Hymenolepis microstoma   1 1
No Yes Echinococcus multilocularis   1 1
No Yes Thelohanellus kitauei   1 1
No Yes Nematostella vectensis 1.0 Starlet sea anemone 2 1
No Yes Hydra vulgaris   2 2
No Yes Amphimedon queenslandica   3 3
No Yes Trichoplax adhaerens   2 2
No Yes Proterospongia sp. ATCC 50818   1 1
No Yes Monosiga brevicollis   2 2
No Yes Sphaeroforma arctica JP610   1 1
No Yes Capsaspora owczarzaki ATCC 30864   1 1
No Yes Conidiobolus coronatus NRRL28638 v1.0   2 2
No Yes Mortierella verticillata NRRL 6337   1 1
No Yes Phycomyces blakesleeanus   1 1
No Yes Rhizopus oryzae RA 99-880   1 1
No Yes Mucor circinelloides   3 3
No Yes Sporisorium reilianum 22   1 1
No Yes Mixia osmundae IAM 14324 v1.0   1 1
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0   1 1
No Yes Melampsora laricis-populina   1 1
No Yes Rhodotorula graminis WP1 v1.0   1 1
No Yes Microbotryum violaceum 22   1 1
No Yes Wallemia sebi v1.0   1 1
No Yes Sphaerobolus stellatus v1.0   1 1
No Yes Piloderma croceum F 1598 v1.0   2 2
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   1 1
No Yes Coprinopsis cinerea okayama7 130 v3   1 1
No Yes Pleurotus ostreatus Oyster mushroom 1 1
No Yes Amanita muscaria Koide v1.0 Fly agaric 1 1
No Yes Laccaria bicolor S238N-H82   2 2
No Yes Schizophyllum commune   2 2
No Yes Gloeophyllum trabeumv1.0   2 2
No Yes Postia placenta   1 1
No Yes Wolfiporia cocos MD-104 SS10 v1.0   2 2
No Yes Fomitopsis pinicolav1.0   1 1
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   1 1
No Yes Dichomitus squalens   1 1
No Yes Trametes versicolor v1.0   1 1
No Yes Tremella mesenterica Witches' butter 1 1
No Yes Leptosphaeria maculans 22   1 1
No Yes Setosphaeria turcica v1.0   1 1
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 1 1
No Yes Aspergillus glaucus   1 1
No Yes Aspergillus carbonarius ITEM 5010   1 1
No Yes Aspergillus oryzae RIB40   1 1
No Yes Aspergillus flavus NRRL3357   1 1
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Wickerhamomyces anomalus   1 1
No Yes Schizosaccharomyces cryophilus OY26 22   1 1
No Yes Schizosaccharomyces pombe Fission yeast 1 1
No Yes Allomyces macrogynus ATCC 38327   5 5
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Dictyostelium discoideum   3 3
No Yes Dictyostelium purpureum   2 2
No Yes Entamoeba dispar 1.2   3 3
No Yes Entamoeba invadens 1.2   3 3
No Yes Entamoeba histolytica 1   3 3
No Yes Thecamonas trahens ATCC 50062   4 4
No Yes Bigelowiella natans CCMP2755 22   1 1
No Yes Paramecium tetraurelia   1 1
No Yes Tetrahymena thermophila SB210 1   1 1
No Yes Naegleria gruberi   3 3
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Emiliania huxleyi CCMP1516   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 14 7
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 3 3
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 1 1
No Yes Aspergillus fumigatus A1163   1 1
No Yes Schizosaccharomyces pombe 972h-   1 1
No Yes Batrachochytrium dendrobatidis JEL423   1 1
No Yes Batrachochytrium dendrobatidis JAM81   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 6 3
No Yes Homo sapiens (NCBI version) Human 4 2
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 4 2
No Yes Loa loa v3.3 (Request) Eye worm 1 1
No Yes Homo sapiens 69_37 Human 4 2
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 2 1
No Yes Gorilla gorilla 69_3.1 Western gorilla 4 2
No Yes Pongo abelii 69_2 Sumatran orangutan 3 2
No Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 4 2
No Yes Macaca mulatta 69_1 Rhesus monkey 4 2
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 4 2
No Yes Otolemur garnettii 69_3 Small-eared galago 4 2
No Yes Microcebus murinus 69_1 Gray mouse lemur 1 1
No Yes Rattus norvegicus 69_3.4 Norway rat 1 1
No Yes Mus musculus 69_38 House mouse 4 2
No Yes Dipodomys ordii 69_1 Ord's kangaroo rat 3 2
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 4 2
No Yes Cavia porcellus 69_3 Domestic guinea pig 4 2
No Yes Oryctolagus cuniculus 69_2 Rabbit 4 2
No Yes Ochotona princeps 69 American pika 2 1
No Yes Tupaia belangeri 69 Northern tree shrew 2 2
No Yes Sus scrofa 69_10.2 Pig 2 1
No Yes Bos taurus 69_3.1 Cattle 2 1
No Yes Vicugna pacos 69_1 Alpaca 3 2
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 3 2
No Yes Mustela putorius furo 69_1.0 Domestic ferret 4 2
No Yes Ailuropoda melanoleuca 69_1 Giant panda 4 2
No Yes Canis familiaris 69_3.1 Dog 4 2
No Yes Felis catus 69 Domestic cat 3 2
No Yes Equus caballus 69_2 Horse 3 2
No Yes Myotis lucifugus 69_2.0 Little brown bat 4 2
No Yes Pteropus vampyrus 69_1 Large flying fox 3 2
No Yes Sorex araneus 69_1 European shrew 3 2
No Yes Erinaceus europaeus 69 Western European hedgehog 3 2
No Yes Procavia capensis 69_1 Cape rock hyrax 4 2
No Yes Loxodonta africana 69_3 African savanna elephant 4 2
No Yes Echinops telfairi 69 Small Madagascar hedgehog 4 2
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 1 1
No Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 2 1
No Yes Macropus eugenii 69_1.0 Tammar wallaby 2 1
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 4 2
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 6 3
No Yes Ornithorhynchus anatinus 69_5 Platypus 3 2
No Yes Petromyzon marinus 69_7.0 Sea lamprey 5 3
No Yes Meleagris gallopavo 69_2 Turkey 2 1
No Yes Gallus gallus 69_2 Chicken 2 1
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 2 1
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 2 1
No Yes Anolis carolinensis 69_2.0 Green anole 4 2
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 6 3
No Yes Latimeria chalumnae 69_1 Coelacanth 5 3
No Yes Gadus morhua 69_1 Atlantic cod 4 2
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 5 3
No Yes Takifugu rubripes 69_4 Torafugu 6 3
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 4 2
No Yes Oryzias latipes 69_1 Japanese medaka 2 1
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 5 3
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 5 3
No Yes Danio rerio 69_9 Zebrafish 8 4
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 69 Vase tunicate 1 1
No Yes Drosophila melanogaster 69_5 Fruit fly 1 1
No Yes NCBI 2017_08 genome   1760 1094
No Yes Protozoadb 2010_08 (Protozoadb)   12 12
No Yes STRING v9.0.5 (STRING)   132 89
No Yes Uniprot 2018_03 genome   1395 1036
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   9 8
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   9 9
No Yes TargetDB (Targets)   2 1

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.