SUPERFAMILY 1.75 HMM library and genome assignments server

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Terpenoid cyclase N-terminal domain family domain assignments
in
all bacterial and archaeal genomes


No domain assignments for these genomes.


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View all assignments containing a Terpenoid cyclase N-terminal domain domain in each group of genomes.

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Add assignments from individual genomes

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Select to display   Genome       Domains   Proteins
No Yes ALL   8681 8681
No Yes Pinus taeda Loblolly pine 1 1
No Yes Picea abies Norway spruce 5 5
No Yes Eucalyptus grandis v201 Rose gum 62 62
No Yes Theobroma cacao B97-61/B2 v1 Cacao 28 28
No Yes Gossypium raimondii v221   63 63
No Yes Citrus clementina v165   51 51
No Yes Citrus sinensis v154 Sweet orange 39 39
No Yes Thellungiella halophila v173   9 9
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 25 25
No Yes Capsella rubella v183   26 26
No Yes Arabidopsis lyrata Lyrate rockcress 15 15
No Yes Arabidopsis thaliana 10 Thale cress 31 31
No Yes Carica papaya Papaya 8 8
No Yes Medicago truncatula Barrel medic 27 27
No Yes Phaseolus vulgaris v186 French bean 27 27
No Yes Glycine max v109 Soybean 14 14
No Yes Cucumis sativus v122 Cucumber 19 19
No Yes Fragaria vesca Wild strawberry 34 33
No Yes Malus domestica v196 Apple 34 34
No Yes Prunus persica v139 Peach 7 7
No Yes Linum usitatissimum v200 Flax 19 19
No Yes Manihot esculenta v147 Cassava 21 21
No Yes Populus trichocarpa v156 Black cottonwood 47 47
No Yes Vitis vinifera Wine grape 49 47
No Yes Mimulus guttatus v140 Spotted monkey flower 28 28
No Yes Solanum lycopersicum v.2.3 Tomato 20 20
No Yes Solanum tuberosum Potato 41 40
No Yes Actinidia chinensis Hongyang   17 16
No Yes Aquilegia coerulea v195   41 41
No Yes Triticum urartu 22   18 18
No Yes Triticum aestivum 22 Bread wheat 24 24
No Yes Aegilops tauschii 22   21 21
No Yes Brachypodium distachyon Stiff brome 9 9
No Yes Oryza barthii 22 African wild rice 41 36
No Yes Oryza meridionalis 22   25 21
No Yes Oryza glumaepatula 22   41 37
No Yes Oryza glaberrima African rice 14 14
No Yes Oryza punctata 22   24 24
No Yes Oryza nivara 22   71 45
No Yes Oryza brachyantha 22 Malo sina 12 12
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 26 26
No Yes Oryza sativa v193 Rice 26 26
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 9 9
No Yes Panicum virgatum v202 Switchgrass 42 42
No Yes Setaria italica v164 Foxtail millet 25 25
No Yes Zea mays subsp. mays Maize 25 25
No Yes Zea mays v181 Maize 25 25
No Yes Sorghum bicolor Sorghum 23 23
No Yes Musa balbisiana Balbis banana 11 11
No Yes Musa acuminata 22 Wild Malaysian banana 21 21
No Yes Amborella trichopoda 22   10 10
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 25 25
No Yes Hordeum vulgare 22 Domesticated barley 15 15
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 30 30
No Yes Pinus sylvestris (Incomplete) Scots pine 2 2
No Yes Picea sitchensis (Incomplete) Sitka spruce 2 2
No Yes Lotus japonicus (Early assembly)   7 7
No Yes Malus x domestica (Duplicate) Apple 34 34
No Yes Ricinus communis (Early assembly) Castor bean 21 21
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   27 27
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 20 20
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 20 20
No Yes Phoenix dactylifera (Early draft) Date palm 1 1
No Yes Arabidopsis thaliana 10 Thale cress 28 28
No Yes NCBI 2017_08 genome   2266 2264
No Yes STRING v9.0.5 (STRING)   225 225
No Yes Uniprot 2018_03 genome   3619 3552
No Yes PDB chains (SCOP 1.75) (PDB)   7 7
No Yes Protein Data Bank (all PDB sequenc)   43 43
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   189 189
No Yes TargetDB (Targets)   27 27

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