Select to display Genome Domains Proteins
No Yes ALL 30779 30779
No Yes Saccoglossus kowalevskii v3.0 6 6
No Yes Petromyzon marinus 76_7.0 Sea lamprey 3 3
No Yes Lepisosteus oculatus 76 Spotted gar 1 1
No Yes Gadus morhua 76_1 Atlantic cod 1 1
No Yes Takifugu rubripes 76_4 Torafugu 1 1
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 1 1
No Yes Oryzias latipes 76_1 Japanese medaka 1 1
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 1 1
No Yes Poecilia formosa 76 Amazon molly 1 1
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 2 2
No Yes Astyanax mexicanus 76 Mexican tetra 1 1
No Yes Danio rerio 76_9 Zebrafish 2 2
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 2 2
No Yes Ciona intestinalis 76 Vase tunicate 10 10
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Adineta vaga 13 13
No Yes Octopus bimaculoides 280 1 1
No Yes Crassostrea gigas 22 Pacific oyster 8 4
No Yes Lottia gigantea Owl limpet 7 6
No Yes Bombyx mori Domestic silkworm 1 1
No Yes Nasonia vitripennis Jewel wasp 1 1
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 1 1
No Yes Linepithema humile v1.1 Argentine ant 1 1
No Yes Drosophila grimshawi 1.3 1 1
No Yes Drosophila willistoni 1.3 1 1
No Yes Drosophila pseudoobscura 2.13 1 1
No Yes Drosophila persimilis 1.3 1 1
No Yes Drosophila yakuba 1.3 1 1
No Yes Drosophila sechellia 1.3 1 1
No Yes Drosophila melanogaster 76_5 Fruit fly 2 2
No Yes Drosophila erecta 1.3 1 1
No Yes Drosophila virilis 1.2 1 1
No Yes Drosophila mojavensis 1.3 1 1
No Yes Megaselia scalaris 22 1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 2 2
No Yes Culex pipiens quinquefasciatus Southern house mosquito 1 1
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Daphnia pulex Common water flea 2 2
No Yes Pristionchus pacificus 2 2
No Yes Meloidogyne incognita Southern root-knot nematode 2 1
No Yes Onchocerca volvulus 22 2 1
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 1 1
No Yes Caenorhabditis japonica 5 4
No Yes Caenorhabditis brenneri 5 5
No Yes Caenorhabditis remanei 6 6
No Yes Caenorhabditis elegans 76_235 Roundworm 5 5
No Yes Caenorhabditis briggsae 2 4 4
No Yes Acropora digitifera v1.0 5 5
No Yes Nematostella vectensis 1.0 Starlet sea anemone 6 6
No Yes Amphimedon queenslandica 7 7
No Yes Trichoplax adhaerens 12 10
No Yes Proterospongia sp. ATCC 50818 3 3
No Yes Monosiga brevicollis 1 1
No Yes Sphaeroforma arctica JP610 2 2
No Yes Capsaspora owczarzaki ATCC 30864 1 1
No Yes Conidiobolus coronatus NRRL28638 v1.0 4 4
No Yes Mortierella verticillata NRRL 6337 3 3
No Yes Sporisorium reilianum 22 1 1
No Yes Ustilago maydis 1 1
No Yes Mixia osmundae IAM 14324 v1.0 1 1
No Yes Cronartium quercuum f. sp. fusiforme G11 v1.0 2 2
No Yes Melampsora laricis-populina 2 2
No Yes Rhodotorula graminis WP1 v1.0 2 2
No Yes Sporobolomyces roseus IAM 13481 1 1
No Yes Microbotryum violaceum 22 4 4
No Yes Sphaerobolus stellatus v1.0 6 6
No Yes Piloderma croceum F 1598 v1.0 2 2
No Yes Serpula lacrymans var. lacrymans S7.9 4 4
No Yes Coniophora puteana 4 4
No Yes Hydnomerulius pinastri v2.0 4 4
No Yes Coprinopsis cinerea okayama7 130 v3 8 8
No Yes Pleurotus ostreatus Oyster mushroom 3 3
No Yes Amanita thiersii Skay4041 v1.0 3 3
No Yes Amanita muscaria Koide v1.0 Fly agaric 1 1
No Yes Galerina marginata v1.0 4 4
No Yes Hebeloma cylindrosporum h7 v2.0 2 2
No Yes Laccaria bicolor S238N-H82 4 4
No Yes Agaricus bisporus var. bisporus 2 2
No Yes Schizophyllum commune 4 4
No Yes Stereum hirsutum FP-91666 SS1 v1.0 3 3
No Yes Heterobasidion annosum 3 3
No Yes Punctularia strigosozonata v1.0 3 3
No Yes Sebacina vermifera MAFF 305830 v1.0 7 7
No Yes Fomitiporia mediterranea v1.0 3 3
No Yes Tulasnella calospora AL13/4D v1.0 7 7
No Yes Phanerochaete chrysosporium RP-78 2.1 3 3
No Yes Dichomitus squalens 4 4
No Yes Trametes versicolor v1.0 3 3
No Yes Tremella mesenterica Witches' butter 2 2
No Yes Daldinia eschscholzii EC12 v1.0 9 9
No Yes Apiospora montagnei NRRL 25634 v1.0 11 11
No Yes Magnaporthe poae ATCC 64411 22 9 9
No Yes Magnaporthe grisea 70-15 10 10
No Yes Podospora anserina 11 11
No Yes Sporotrichum thermophile ATCC 42464 8 8
No Yes Thielavia terrestris NRRL 8126 8 8
No Yes Chaetomium globosum CBS 148.51 10 10
No Yes Neurospora tetrasperma 7 7
No Yes Neurospora discreta FGSC 8579 7 7
No Yes Neurospora crassa OR74A 9 8
No Yes Cryphonectria parasitica Chestnut blight fungus 5 5
No Yes Verticillium albo-atrum VaMs.102 5 5
No Yes Verticillium dahliae VdLs.17 4 4
No Yes Acremonium alcalophilum v 1.0 3 3
No Yes Glomerella graminicola 22 8 8
No Yes Fusarium graminearum 8 8
No Yes Nectria haematococca mpVI 7 7
No Yes Fusarium oxysporum f. sp. lycopersici 4286 15 15
No Yes Fusarium verticillioides 7600 9 9
No Yes Trichoderma asperellum CBS 433.97 v1.0 5 5
No Yes Trichoderma atroviride 4 4
No Yes Trichoderma citrinoviride v1.0 4 4
No Yes Trichoderma reesei 1.2 3 3
No Yes Trichoderma virens Gv29-8 4 4
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0 4 4
No Yes Trichoderma harzianum CBS 226.95 v1.0 5 5
No Yes Amorphotheca resinae v1.0 Creosote fungus 3 3
No Yes Botrytis cinerea B05.10 7 7
No Yes Sclerotinia sclerotiorum 5 5
No Yes Didymella exigua CBS 183.55 v1.0 6 6
No Yes Leptosphaeria maculans 22 8 8
No Yes Setosphaeria turcica v1.0 8 8
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0 7 7
No Yes Cochliobolus victoriae FI3 v1.0 7 7
No Yes Cochliobolus carbonum 26-R-13 v1.0 7 7
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 7 7
No Yes Alternaria brassicicola 8 8
No Yes Cochliobolus lunatus m118 v2.0 8 8
No Yes Pyrenophora teres f. teres 22 6 6
No Yes Pyrenophora tritici-repentis 7 7
No Yes Stagonospora nodorum 9 9
No Yes Mycosphaerella graminicola IPO323 7 7
No Yes Zasmidium cellare ATCC 36951 v1.0 5 5
No Yes Dothistroma septosporum 5 5
No Yes Septoria musiva v1.0 4 4
No Yes Mycosphaerella fijiensis CIRAD86 5 5
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0 3 3
No Yes Paracoccidioides brasiliensis Pb18 3 3
No Yes Coccidioides posadasii RMSCC 3488 3 3
No Yes Coccidioides immitis RS 3 3
No Yes Ajellomyces dermatitidis SLH14081 2 2
No Yes Histoplasma capsulatum class NAmI strain WU24 3 3
No Yes Microsporum canis CBS 113480 2 2
No Yes Trichophyton equinum CBS 127.97 2 2
No Yes Trichophyton verrucosum HKI 0517 2 2
No Yes Arthroderma benhamiae CBS 112371 2 2
No Yes Trichophyton tonsurans CBS 112818 2 2
No Yes Trichophyton rubrum CBS 118892 2 2
No Yes Uncinocarpus reesii 1704 3 3
No Yes Aspergillus zonatus v1.0 2 2
No Yes Penicillium chrysogenum Wisconsin 54-1255 1 1
No Yes Penicillium chrysogenum v1.0 1 1
No Yes Aspergillus acidus v1.0 4 4
No Yes Aspergillus fumigatus Af293 4 4
No Yes Aspergillus brasiliensis v1.0 5 5
No Yes Aspergillus nidulans FGSC A4 5 5
No Yes Aspergillus sydowii v1.0 6 6
No Yes Aspergillus versicolor v1.0 6 6
No Yes Aspergillus glaucus 3 3
No Yes Aspergillus carbonarius ITEM 5010 4 4
No Yes Neosartorya fischeri NRRL 181 5 5
No Yes Aspergillus terreus NIH2624 8 8
No Yes Aspergillus tubingensis v1.0 4 4
No Yes Aspergillus wentii v1.0 4 4
No Yes Aspergillus oryzae RIB40 6 6
No Yes Aspergillus niger 22 4 4
No Yes Aspergillus niger ATCC 1015 4 4
No Yes Aspergillus flavus NRRL3357 7 7
No Yes Aspergillus clavatus NRRL 1 4 4
No Yes Penicillium marneffei ATCC 18224 6 6
No Yes Tuber melanosporum Mel28 22 1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Catenaria anguillulae PL171 v1.0 5 5
No Yes Allomyces macrogynus ATCC 38327 16 9
No Yes Spizellomyces punctatus DAOM BR117 6 6
No Yes Dictyostelium discoideum 1 1
No Yes Dictyostelium purpureum 1 1
No Yes Picea abies Norway spruce 1 1
No Yes Eucalyptus grandis v201 Rose gum 2 2
No Yes Thellungiella halophila v173 1 1
No Yes Medicago truncatula Barrel medic 1 1
No Yes Phaseolus vulgaris v186 French bean 2 2
No Yes Glycine max v109 Soybean 5 5
No Yes Cucumis sativus v122 Cucumber 1 1
No Yes Populus trichocarpa v156 Black cottonwood 2 2
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 2 2
No Yes Solanum tuberosum Potato 2 2
No Yes Actinidia chinensis Hongyang 2 2
No Yes Aquilegia coerulea v195 1 1
No Yes Triticum aestivum 22 Bread wheat 3 3
No Yes Aegilops tauschii 22 2 2
No Yes Oryza barthii 22 African wild rice 1 1
No Yes Oryza meridionalis 22 1 1
No Yes Oryza glumaepatula 22 1 1
No Yes Oryza glaberrima African rice 1 1
No Yes Oryza punctata 22 1 1
No Yes Oryza nivara 22 1 1
No Yes Oryza brachyantha 22 Malo sina 2 2
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 1 1
No Yes Oryza sativa v193 Rice 1 1
No Yes Panicum virgatum v202 Switchgrass 1 1
No Yes Setaria italica v164 Foxtail millet 1 1
No Yes Sorghum bicolor Sorghum 1 1
No Yes Amborella trichopoda 22 1 1
No Yes Physcomitrella patens 1 1
No Yes Porphyridium purpureum 02_2012 1 1
No Yes Thecamonas trahens ATCC 50062 9 8
No Yes Bigelowiella natans CCMP2755 22 4 4
No Yes Cyanophora paradoxa 2 2
No Yes Albugo laibachii 22 1 1
No Yes Pythium iwayamai DAOM BR242034 22 2 2
No Yes Pythium arrhenomanes ATCC 12531 22 3 3
No Yes Pythium ultimum v1.7-2 2 2
No Yes Pythium aphanidermatum DAOM BR444 22 2 2
No Yes Pythium irregulare DAOM BR486 22 2 2
No Yes Pythium vexans DAOM BR484 22 2 2
No Yes Phytophthora ramorum 1.1 Sudden oak death agent 3 3
No Yes Phytophthora sojae 1.1 2 2
No Yes Phytophthora infestans T30-4 2 2
No Yes Phytophthora capsici 2 2
No Yes Hyaloperonospora arabidopsidis 22 2 2
No Yes Phaeodactylum tricornutum CCAP 1055/1 1 1
No Yes Fragilariopsis cylindrus 3 3
No Yes Thalassiosira pseudonana CCMP1335 3 3
No Yes Paramecium tetraurelia 5 5
No Yes Tetrahymena thermophila SB210 1 7 7
No Yes Ichthyophthirius multifiliis strain G5 1 1
No Yes Symbiodinium minutum clade B1 v1.2 4 4
No Yes Naegleria gruberi 1 1
No Yes Guillardia theta CCMP2712 v1.0 1 1
No Yes Emiliania huxleyi CCMP1516 3 3
No Yes Thermobaculum terrenum ATCC BAA-798 3 3
No Yes Conexibacter woesei DSM 14684 1 1
No Yes Catenulispora acidiphila DSM 44928 2 2
No Yes Saccharopolyspora erythraea NRRL 2338 1 1
No Yes Amycolatopsis mediterranei U32 1 1
No Yes Kribbella flavida DSM 17836 2 2
No Yes Microlunatus phosphovorus NM-1 1 1
No Yes Verrucosispora maris AB-18-032 2 2
No Yes Micromonospora sp. L5 1 1
No Yes Micromonospora aurantiaca ATCC 27029 1 1
No Yes Beutenbergia cavernae DSM 12333 3 2
No Yes Microbacterium testaceum StLB037 1 1
No Yes Jonesia denitrificans DSM 20603 1 1
No Yes Intrasporangium calvum DSM 43043 1 1
No Yes Brachybacterium faecium DSM 4810 1 1
No Yes Xylanimonas cellulosilytica DSM 15894 2 2
No Yes Cellulomonas flavigena DSM 20109 2 2
No Yes Cellulomonas fimi ATCC 484 1 1
No Yes [Cellvibrio] gilvus ATCC 13127 1 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270 3 3
No Yes Anaerolinea thermophila UNI-1 3 3
No Yes Roseiflexus sp. RS-1 2 2
No Yes Roseiflexus castenholzii DSM 13941 2 2
No Yes Chloroflexus sp. MS-G 1 1
No Yes Chloroflexus sp. Y-400-fl 1 1
No Yes Chloroflexus aggregans DSM 9485 1 1
No Yes Chloroflexus aurantiacus J-10-fl 1 1
No Yes Truepera radiovictrix DSM 17093 2 2
No Yes Deinococcus gobiensis I-0 2 2
No Yes Deinococcus deserti VCD115 1 1
No Yes Deinococcus maricopensis DSM 21211 2 2
No Yes Deinococcus geothermalis DSM 11300 2 2
No Yes Deinococcus proteolyticus MRP 1 1
No Yes Oceanithermus profundus DSM 14977 1 1
No Yes Marinithermus hydrothermalis DSM 14884 1 1
No Yes Meiothermus silvanus DSM 9946 1 1
No Yes Meiothermus ruber DSM 1279 1 1
No Yes Thermus sp. CCB_US3_UF1 3 2
No Yes Thermus scotoductus SA-01 1 1
No Yes Thermus thermophilus HB27 3 2
No Yes Clostridium clariflavum DSM 19732 10 5
No Yes Clostridium cellulolyticum H10 5 5
No Yes Ethanoligenens harbinense YUAN-3 1 1
No Yes Thermincola potens JR 1 1
No Yes Clostridium phytofermentans ISDg 1 1
No Yes Clostridium lentocellum DSM 5427 1 1
No Yes Butyrivibrio proteoclasticus B316 1 1
No Yes Butyrivibrio fibrisolvens 1 1
No Yes Clostridium sp. BNL1100 4 4
No Yes Clostridium acetobutylicum ATCC 824 1 1
No Yes Mahella australiensis 50-1 BON 1 1
No Yes Caldicellulosiruptor kronotskyensis 2002 3 2
No Yes Caldicellulosiruptor hydrothermalis 108 1 1
No Yes Caldicellulosiruptor owensensis OL 2 1
No Yes Caldicellulosiruptor lactoaceticus 6A 2 1
No Yes Caldicellulosiruptor kristjanssonii 177R1B 3 1
No Yes Thermoanaerobacterium xylanolyticum LX-11 2 1
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571 2 1
No Yes Coprothermobacter proteolyticus DSM 5265 2 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3 2 1
No Yes Thermoanaerobacter italicus Ab9 2 1
No Yes Acetohalobium arabaticum DSM 5501 1 1
No Yes Halothermothrix orenii H 168 1 1
No Yes Halanaerobium hydrogeniformans 1 1
No Yes Halanaerobium praevalens DSM 2228 1 1
No Yes Paenibacillus sp. JDR-2 9 7
No Yes Paenibacillus mucilaginosus 3016 5 4
No Yes Bacillus cellulosilyticus DSM 2522 1 1
No Yes Gemmatimonas aurantiaca T-27 7 7
No Yes Melioribacter roseus P3M 3 3
No Yes Ignavibacterium album JCM 16511 3 3
No Yes Haliscomenobacter hydrossis DSM 1100 6 6
No Yes Saprospira grandis str. Lewin 1 1
No Yes Niastella koreensis GR20-10 7 6
No Yes Chitinophaga pinensis DSM 2588 4 3
No Yes Salinibacter ruber M8 1 1
No Yes Rhodothermus marinus DSM 4252 3 3
No Yes Flexibacter litoralis DSM 6794 1 1
No Yes Cyclobacterium marinum DSM 745 7 7
No Yes Marivirga tractuosa DSM 4126 3 3
No Yes Fibrella aestuarina 4 4
No Yes Leadbetterella byssophila DSM 17132 1 1
No Yes Dyadobacter fermentans DSM 18053 3 3
No Yes Cytophaga hutchinsonii ATCC 33406 10 10
No Yes Spirosoma linguale DSM 74 6 6
No Yes Runella slithyformis DSM 19594 7 7
No Yes Parabacteroides distasonis ATCC 8503 3 3
No Yes Tannerella forsythia ATCC 43037 1 1
No Yes Paludibacter propionicigenes WB4 2 2
No Yes Odoribacter splanchnicus DSM 20712 1 1
No Yes Bacteroides sp. CF50 1 1
No Yes Prevotella melaninogenica ATCC 25845 1 1
No Yes Prevotella denticola F0289 1 1
No Yes Alistipes finegoldii DSM 17242 1 1
No Yes Bacteroides helcogenes P 36-108 2 2
No Yes Bacteroides vulgatus ATCC 8482 2 2
No Yes Bacteroides thetaiotaomicron VPI-5482 2 2
No Yes Bacteroides fragilis YCH46 2 2
No Yes Pedobacter saltans DSM 12145 2 2
No Yes Solitalea canadensis DSM 3403 3 3
No Yes Pedobacter heparinus DSM 2366 2 2
No Yes Sphingobacterium sp. 21 1 1
No Yes Fluviicola taffensis DSM 16823 1 1
No Yes Zunongwangia profunda SM-A87 1 1
No Yes Krokinobacter sp. 4H-3-7-5 4 4
No Yes Gramella forsetii KT0803 2 2
No Yes Lacinutrix sp. 5H-3-7-4 1 1
No Yes Maribacter sp. HTCC2170 11 11
No Yes Robiginitalea biformata HTCC2501 5 5
No Yes Croceibacter atlanticus HTCC2559 2 2
No Yes Aequorivita sublithincola DSM 14238 1 1
No Yes Zobellia galactanivorans 1 1
No Yes Muricauda ruestringensis DSM 13258 3 3
No Yes Cellulophaga algicola DSM 14237 4 4
No Yes Cellulophaga lytica DSM 7489 3 3
No Yes Flavobacteriaceae bacterium 3519-10 1 1
No Yes Polaribacter sp. MED152 2 2
No Yes Capnocytophaga canimorsus Cc5 1 1
No Yes Flavobacterium indicum GPTSA100-9 1 1
No Yes Flavobacterium branchiophilum FL-15 1 1
No Yes Flavobacterium johnsoniae UW101 3 3
No Yes Fibrobacter succinogenes subsp. succinogenes S85 1 1
No Yes Waddlia chondrophila WSU 86-1044 1 1
No Yes Candidatus Protochlamydia amoebophila UWE25 1 1
No Yes Parachlamydia acanthamoebae UV-7 1 1
No Yes Simkania negevensis Z 1 1
No Yes Phycisphaera mikurensis NBRC 102666 4 4
No Yes Isosphaera pallida ATCC 43644 2 2
No Yes Planctomyces brasiliensis DSM 5305 3 3
No Yes Planctomyces limnophilus DSM 3776 1 1
No Yes Rhodopirellula baltica SH 1 2 2
No Yes Pirellula staleyi DSM 6068 2 2
No Yes Methylacidiphilum infernorum V4 2 1
No Yes Opitutus terrae PB90-1 4 3
No Yes Akkermansia muciniphila ATCC BAA-835 1 1
No Yes Spirochaeta smaragdinae DSM 11293 2 2
No Yes Sphaerochaeta pleomorpha str. Grapes 1 1
No Yes Sphaerochaeta globus str. Buddy 1 1
No Yes Sphaerochaeta coccoides DSM 17374 1 1
No Yes Treponema azotonutricium ZAS-9 2 2
No Yes Treponema primitia ZAS-2 1 1
No Yes Treponema brennaborense DSM 12168 1 1
No Yes Spirochaeta africana DSM 8902 1 1
No Yes Spirochaeta thermophila DSM 6192 1 1
No Yes Flexistipes sinusarabici DSM 4947 2 2
No Yes Marinitoga piezophila KA3 1 1
No Yes Petrotoga mobilis SJ95 3 2
No Yes Mesotoga prima MesG1.Ag.4.2 1 1
No Yes Kosmotoga olearia TBF 19.5.1 7 6
No Yes Fervidobacterium pennivorans DSM 9078 4 4
No Yes Fervidobacterium nodosum Rt17-B1 2 2
No Yes Thermosipho melanesiensis BI429 1 1
No Yes Thermotoga lettingae TMO 1 1
No Yes Thermotoga thermarum DSM 5069 2 1
No Yes Thermotoga sp. RQ2 5 3
No Yes Thermotoga naphthophila RKU-10 4 3
No Yes Thermotoga petrophila RKU-1 4 3
No Yes Thermotoga neapolitana DSM 4359 6 4
No Yes Thermotoga maritima MSB8 3 2
No Yes Dictyoglomus turgidum DSM 6724 6 5
No Yes Dictyoglomus thermophilum H-6-12 3 3
No Yes Caldisericum exile AZM16c01 1 1
No Yes Candidatus Chloracidobacterium thermophilum B 1 1
No Yes Candidatus Solibacter usitatus Ellin6076 3 3
No Yes Granulicella tundricola MP5ACTX9 2 2
No Yes Candidatus Koribacter versatilis Ellin345 2 2
No Yes Terriglobus saanensis SP1PR4 1 1
No Yes Terriglobus roseus DSM 18391 3 3
No Yes Acidobacterium capsulatum ATCC 51196 1 1
No Yes Syntrophobacter fumaroxidans MPOB 1 1
No Yes Desulfotalea psychrophila LSv54 2 2
No Yes Desulfobacterium autotrophicum HRM2 1 1
No Yes Haliangium ochraceum DSM 14365 5 5
No Yes Sorangium cellulosum 'So ce 56' 3 3
No Yes Anaeromyxobacter sp. Fw109-5 1 1
No Yes Anaeromyxobacter dehalogenans 2CP-1 2 2
No Yes Stigmatella aurantiaca DW4/3-1 3 3
No Yes Corallococcus coralloides DSM 2259 6 6
No Yes Myxococcus xanthus DK 1622 1 1
No Yes Myxococcus fulvus HW-1 1 1
No Yes Thauera sp. MZ1T 1 1
No Yes Pseudogulbenkiania sp. NH8B 1 1
No Yes Methylobacterium sp. 4-46 1 1
No Yes Methylobacterium nodulans ORS 2060 1 1
No Yes Bradyrhizobium japonicum USDA 110 1 1
No Yes Bradyrhizobium sp. ORS 278 1 1
No Yes Teredinibacter turnerae T7901 1 1
No Yes Cellvibrio japonicus Ueda107 2 2
No Yes Vibrio sp. Ex25 1 1
No Yes Vibrio parahaemolyticus RIMD 2210633 1 1
No Yes Photobacterium profundum SS9 3 3
No Yes Ferrimonas balearica DSM 9799 1 1
No Yes Shewanella piezotolerans WP3 3 3
No Yes Shewanella loihica PV-4 1 1
No Yes Shewanella halifaxensis HAW-EB4 1 1
No Yes Shewanella sediminis HAW-EB3 2 2
No Yes Shewanella pealeana ATCC 700345 2 2
No Yes Shewanella oneidensis MR-1 2 2
No Yes Shewanella baltica OS185 1 1
No Yes Shewanella woodyi ATCC 51908 1 1
No Yes Shewanella sp. MR-4 2 2
No Yes Shewanella amazonensis SB2B 2 2
No Yes Shewanella violacea DSS12 2 2
No Yes Shewanella frigidimarina NCIMB 400 3 3
No Yes Shewanella putrefaciens CN-32 1 1
No Yes Colwellia psychrerythraea 34H 4 4
No Yes Pseudoalteromonas sp. SM9913 3 3
No Yes Pseudoalteromonas atlantica T6c 2 2
No Yes Pseudoalteromonas haloplanktis TAC125 2 2
No Yes Glaciecola sp. 4H-3-7+YE-5 2 2
No Yes Glaciecola nitratireducens FR1064 3 3
No Yes Marinobacter adhaerens HP15 1 1
No Yes Marinobacter hydrocarbonoclasticus ATCC 49840 1 1
No Yes Marinobacter aquaeolei VT8 1 1
No Yes Alteromonas sp. SN2 2 2
No Yes Alteromonas macleodii str. 'Deep ecotype' 2 2
No Yes Kangiella koreensis DSM 16069 2 2
No Yes Hahella chejuensis KCTC 2396 2 2
No Yes Rhodanobacter denitrificans 2 2
No Yes Francisella sp. TX077308 1 1
No Yes Francisella philomiragia subsp. philomiragia ATCC 25017 1 1
No Yes Thermogladius cellulolyticus 1633 3 2
No Yes Ignisphaera aggregans DSM 17230 3 3
No Yes Thermosphaera aggregans DSM 11486 2 2
No Yes Staphylothermus hellenicus DSM 12710 1 1
No Yes Staphylothermus marinus F1 3 2
No Yes Desulfurococcus fermentans DSM 16532 3 3
No Yes Desulfurococcus kamchatkensis 1221n 3 3
No Yes Desulfurococcus mucosus DSM 2162 2 2
No Yes Thermofilum sp. 1910b 2 2
No Yes Pyrobaculum sp. 1860 2 2
No Yes Pyrobaculum calidifontis JCM 11548 3 3
No Yes Pyrobaculum arsenaticum DSM 13514 2 2
No Yes Pyrobaculum oguniense TE7 2 2
No Yes Thermoproteus neutrophilus V24Sta 1 1
No Yes Pyrobaculum aerophilum str. IM2 2 2
No Yes Pyrobaculum islandicum DSM 4184 2 2
No Yes Thermococcus sp. 4557 5 2
No Yes Thermococcus onnurineus NA1 6 3
No Yes Thermococcus kodakarensis KOD1 2 2
No Yes Thermococcus gammatolerans EJ3 5 4
No Yes Thermococcus barophilus MP 5 2
No Yes Pyrococcus sp. ST04 5 2
No Yes Pyrococcus yayanosii CH1 4 2
No Yes Pyrococcus abyssi GE5 6 2
No Yes Pyrococcus furiosus COM1 5 2
No Yes Thermoplasma acidophilum DSM 1728 1 1
No Yes Halopiger xanaduensis SH-6 2 2
No Yes Haloterrigena turkmenica DSM 5511 3 3
No Yes Haloferax mediterranei ATCC 33500 1 1
No Yes Haloferax volcanii DS2 1 1
No Yes Natronomonas pharaonis DSM 2160 1 1
No Yes Haloarcula hispanica ATCC 33960 1 1
No Yes Halalkalicoccus jeotgali B3 1 1
No Yes Aciduliprofundum sp. MAR08-339 1 1
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 1 1
No Yes Ascaris suum Victoria/Ghent Pig roundworm 2 1
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 5 5
No Yes Cryptococcus neoformans var. grubii H99 1 1
No Yes Cryptococcus neoformans B-3501A 1 1
No Yes Cryptococcus neoformans JEC21 1 1
No Yes Paracoccidioides brasiliensis Pb01 3 3
No Yes Paracoccidioides brasiliensis Pb03 3 3
No Yes Coccidioides posadasii str. Silveira 3 3
No Yes Coccidioides immitis RMSCC 3703 2 2
No Yes Coccidioides immitis RMSCC 2394 3 3
No Yes Coccidioides immitis H538.4 3 3
No Yes Ajellomyces dermatitidis ER-3 3 3
No Yes Histoplasma capsulatum H143 3 3
No Yes Histoplasma capsulatum H88 3 3
No Yes Histoplasma capsulatum G186AR 3 3
No Yes Aspergillus fumigatus A1163 4 4
No Yes Batrachochytrium dendrobatidis JEL423 3 3
No Yes Batrachochytrium dendrobatidis JAM81 3 3
No Yes Hordeum vulgare 22 Domesticated barley 1 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Amycolatopsis mediterranei RB 1 1
No Yes Amycolatopsis mediterranei S699 1 1
No Yes Amycolatopsis mediterranei S699 1 1
No Yes Nocardia brasiliensis ATCC 700358 1 1
No Yes Bifidobacterium animalis subsp. lactis ATCC 27673 1 1
No Yes Chthonomonas calidirosea T49 5 4
No Yes Deinococcus peraridilitoris DSM 19664 1 1
No Yes Thermus oshimai JL-2 1 1
No Yes Thermus thermophilus JL-18 3 2
No Yes Thermus thermophilus SG0.5JP17-16 1 1
No Yes Thermus thermophilus HB8 3 2
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532 1 1
No Yes Roseburia intestinalis XB6B4 2 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT) 1 1
No Yes Clostridium acetobutylicum DSM 1731 1 1
No Yes Clostridium acetobutylicum EA 2018 1 1
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485 2 1
No Yes Halobacteroides halobius DSM 5150 2 2
No Yes Thermobacillus composti KWC4 4 4
No Yes Paenibacillus sp. Y412MC10 5 4
No Yes Paenibacillus mucilaginosus KNP414 7 6
No Yes Paenibacillus mucilaginosus K02 7 6
No Yes Amphibacillus xylanus NBRC 15112 3 3
No Yes Salinibacter ruber DSM 13855 1 1
No Yes Rhodothermus marinus SG0.5JP17-172 2 2
No Yes Echinicola vietnamensis DSM 17526 1 1
No Yes Emticicia oligotrophica DSM 17448 7 7
No Yes Prevotella sp. oral taxon 299 str. F0039 1 1
No Yes Prevotella dentalis DSM 3688 1 1
No Yes Alistipes shahii WAL 8301 1 1
No Yes Bacteroides xylanisolvens XB1A 1 1
No Yes Bacteroides fragilis 638R 2 2
No Yes Bacteroides fragilis NCTC 9343 2 2
No Yes Nonlabens dokdonensis DSW-6 2 2
No Yes Psychroflexus torquis ATCC 700755 1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85 1 1
No Yes Singulisphaera acidiphila DSM 18658 5 5
No Yes Spirochaeta thermophila DSM 6578 1 1
No Yes Thermotoga maritima MSB8 3 2
No Yes Desulfocapsa sulfexigens DSM 10523 2 2
No Yes Sorangium cellulosum So0157-2 3 3
No Yes Anaeromyxobacter sp. K 2 2
No Yes Anaeromyxobacter dehalogenans 2CP-C 2 2
No Yes Myxococcus stipitatus DSM 14675 3 3
No Yes Bradyrhizobium sp. BTAi1 1 1
No Yes Bradyrhizobium oligotrophicum S58 1 1
No Yes Vibrio parahaemolyticus BB22OP 1 1
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749 1 1
No Yes Vibrio vulnificus YJ016 1 1
No Yes Shewanella sp. W3-18-1 1 1
No Yes Shewanella sp. ANA-3 2 2
No Yes Shewanella baltica BA175 1 1
No Yes Shewanella baltica OS678 1 1
No Yes Shewanella baltica OS117 1 1
No Yes Shewanella baltica OS223 1 1
No Yes Shewanella baltica OS195 1 1
No Yes Shewanella baltica OS155 1 1
No Yes Shewanella sp. MR-7 2 2
No Yes Shewanella putrefaciens 200 1 1
No Yes Glaciecola psychrophila 170 6 6
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b' 2 2
No Yes Alteromonas macleodii str. 'Ionian Sea UM7' 3 3
No Yes Alteromonas macleodii str. 'Ionian Sea U8' 3 3
No Yes Alteromonas macleodii str. 'Ionian Sea U7' 3 3
No Yes Alteromonas macleodii str. 'Ionian Sea U4' 3 3
No Yes Alteromonas macleodii str. 'Aegean Sea MED64' 2 2
No Yes Alteromonas macleodii AltDE1 3 3
No Yes Alteromonas macleodii str. 'English Channel 673' 2 2
No Yes Alteromonas macleodii str. 'Balearic Sea AD45' 2 2
No Yes Alteromonas macleodii str. 'Black Sea 11' 2 2
No Yes Alteromonas macleodii ATCC 27126 2 2
No Yes Thermococcus sp. AM4 4 3
No Yes Thermococcus sp. CL1 7 4
No Yes Thermococcus litoralis DSM 5473 2 2
No Yes Pyrococcus furiosus DSM 3638 5 4
No Yes Halorhabdus tiamatea SARL4B 1 1
No Yes Haloarcula hispanica N601 1 1
No Yes Loa loa v3.3 (Request) Eye worm 1 1
No Yes Wuchereria bancrofti v1.0 (Request) Agent of lymphatic filariasis 1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 1 1
No Yes Moniliophthora perniciosa FA553 (Genome survey) 4 4
No Yes Picea sitchensis (Incomplete) Sitka spruce 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft) 6 6
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 2 2
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 2 2
No Yes Petromyzon marinus 69_7.0 Sea lamprey 3 3
No Yes Gadus morhua 69_1 Atlantic cod 1 1
No Yes Takifugu rubripes 69_4 Torafugu 1 1
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 1 1
No Yes Oryzias latipes 69_1 Japanese medaka 1 1
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 1 1
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 2 2
No Yes Danio rerio 69_9 Zebrafish 1 1
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 2 2
No Yes Ciona intestinalis 69 Vase tunicate 10 10
No Yes Drosophila melanogaster 69_5 Fruit fly 1 1
No Yes Caenorhabditis elegans 69_215 Roundworm 4 4
No Yes 1_050719N (meta-genome) 11 11
No Yes 1_Upper_euphotic (meta-genome) 1 1
No Yes 2_050719S (meta-genome) 22 22
No Yes 2_Base_of_chrolophyll_max (meta-genome) 1 1
No Yes 3_050719R (meta-genome) 19 19
No Yes 3_Below_base_of_euphotic (meta-genome) 7 7
No Yes 4_050719Q (meta-genome) 21 21
No Yes 4_Deep_abyss (meta-genome) 10 10
No Yes 5_050719P (meta-genome) 26 26
No Yes 5_Below_upper_mesopelagic (meta-genome) 7 7
No Yes 6_Upper_euphotic (meta-genome) 2 2
No Yes 7_Oxygen_minimum_layer (meta-genome) 10 10
No Yes Activated sludge plasmid pool Morges-2009 (Newbler) (meta-genome) 1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome) 3 3
No Yes Bath Hot Springs, filamentous community (meta-genome) 8 8
No Yes Bath Hot Springs, planktonic community (meta-genome) 9 9
No Yes Combined (meta-genome) 4 4
No Yes Crater Hills (meta-genome) 2 2
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome) 6 6
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome) 1 1
No Yes Dump bottom (Dump bottom) (meta-genome) 32 31
No Yes Dump top (Dump top) (meta-genome) 17 17
No Yes Endophytic microbiome from Rice (meta-genome) 2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome) 13 13
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome) 6 6
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome) 7 7
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome) 18 18
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes 7 7
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome) 3 3
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome) 1 1
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome) 7 7
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome) 5 5
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome) 10 10
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome) 11 11
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome) 5 5
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome) 8 7
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome) 11 11
No Yes Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome) 6 6
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome) 12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome) 17 17
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome) 2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome) 4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) 41 41
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome) 12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome) 18 18
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome) 17 17
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) 16 16
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome) 3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome) 19 19
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) 9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome) 9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome) 4 4
No Yes Human Gut Community Subject 8 (meta-genome) 2 1
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome) 1 1
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome) 19 19
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) 13 13
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome) 5 5
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 99 99
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) 38 38
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome) 5 5
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome) 22 22
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome) 28 28
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome) 7 7
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) 29 29
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome) 13 13
No Yes Mouse Gut Community lean1 (meta-genome) 1 1
No Yes Mouse Gut Community ob1 (meta-genome) 1 1
No Yes NCBI 2017_08 genome 10194 9822
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) 21 21
No Yes simHC - Simulated High Complexity Metagenome (meta-genome) 4 4
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome) 4 4
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome) 3 3
No Yes Sludge/Australian, Phrap Assembly (meta-genome) 7 7
No Yes Sludge/US, Jazz Assembly (meta-genome) 7 7
No Yes Sludge/US, Phrap Assembly (meta-genome) 6 6
No Yes Soil microbial communities from Minnesota Farm (meta-genome) 51 51
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 83 83
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) 45 45
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) 21 21
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome) 18 18
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) 33 33
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) 54 54
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome) 2 2
No Yes STRING v9.0.5 (STRING) 519 482
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome) 4 4
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) 63 63
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome) 17 17
No Yes Termite Protist Endosymbiont Community (meta-genome) 1 1
No Yes Uniprot 2018_03 genome 14444 13959
No Yes Uranium Contaminated Groundwater FW106 (meta-genome) 3 3
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome) 32 31
No Yes Global Ocean Sampling Expedition (GOS) 1224 1221
No Yes NCBI plasmid sequences (Plasmids) 8 8
No Yes NCBI viral sequences (Viral) 2 1
No Yes PDB chains (SCOP 1.75 ) (PDB) 5 5
No Yes Protein Data Bank (all PDB sequenc) 22 22
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ) 50 50
No Yes TargetDB (Targets) 27 23