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Carbohydrate-binding domain superfamily domain assignments
in
all genomes

Assignment details

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25 selected genomes have 140 significant domains in 125 proteins.

Showing genomes 1 to 25 of 713
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Oikopleura dioica has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
GSOIDT00011740001   0.00000000251   26-124   Cellulose-binding domain family II  
GSOIDT00016704001   0.00000342   49-112   Cellulose-binding domain family II  
 
Weak hits:
GSOIDT00003770001   0.1   31-74   Cellulose-binding domain family III  
GSOIDT00007694001   0.000565   347-413   Cellulose-binding domain family II  
GSOIDT00008180001   0.00907   417-493   Cellulose-binding domain family II  
  0.0119   277-338   Cellulose-binding domain family II  
GSOIDT00008684001   0.00119   263-302   Cellulose-binding domain family II  
GSOIDT00009402001   0.0335   201-281   Cellulose-binding domain family II  
GSOIDT00010457001   0.0199   149-213   Cellulose-binding domain family II  
GSOIDT00014893001   0.0684   187-224   Cellulose-binding domain family II  
GSOIDT00016074001   0.0356   12-86   Cellulose-binding domain family II  
GSOIDT00017254001   0.0272   438-509   Cellulose-binding domain family II  

Ciona savignyi 76_2.0 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCSAVP00000012908   1.95e-26   3-167   Bacterial chitobiase, n-terminal domain  
 
Weak hits:
ENSCSAVP00000001091   0.0767   93-135   Cellulose-binding domain family II  
ENSCSAVP00000012956   0.00424   89-134   Cellulose-binding domain family III  

Ciona intestinalis 76 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
ENSCINP00000011163   6.84e-31   29-198   Bacterial chitobiase, n-terminal domain  
ENSCINP00000021540   0.0000977   139-217   Cellulose-binding domain family II  
ENSCINP00000025304   5.13e-25   43-208   Bacterial chitobiase, n-terminal domain  
 
Weak hits:
ENSCINP00000021786   0.0068   95-149   Cellulose-binding domain family III  

Adineta vaga has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
GSADVT00029716001   0.00000000000181   20-118   Cellulose-binding domain family II  
GSADVT00029783001   0.000000000000572   20-118   Cellulose-binding domain family II  

Octopus bimaculoides 280 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
Ocbimv22003948m.p   4.39e-28   105-255   Bacterial chitobiase, n-terminal domain  
Ocbimv22030857m.p   1.65e-26   5-169   Bacterial chitobiase, n-terminal domain  
Ocbimv22031175m.p   1.8e-19   11-130   Bacterial chitobiase, n-terminal domain  

Crassostrea gigas 22 has 10 significant domains in 8 proteins.

     

Sequence ID   Evalue   Region   Family  
EKC17289   0.0000115   75-163   Cellulose-binding domain family II  
EKC19699   0.000023   10-173   Bacterial chitobiase, n-terminal domain  
EKC21038   3.14e-23   27-196   Bacterial chitobiase, n-terminal domain  
  1.9e-20   894-1053   Bacterial chitobiase, n-terminal domain  
EKC21981   1.88e-16   60-227   Bacterial chitobiase, n-terminal domain  
EKC29426   3.56e-29   3-159   Bacterial chitobiase, n-terminal domain  
EKC34985   9.21e-28   865-1034   Bacterial chitobiase, n-terminal domain  
  2.51e-24   20-190   Bacterial chitobiase, n-terminal domain  
EKC34986   1.49e-25   17-186   Bacterial chitobiase, n-terminal domain  
EKC40222   0.0000293   1-53   Bacterial chitobiase, n-terminal domain  
 
Weak hits:
EKC19698   0.0046   18-64   Bacterial chitobiase, n-terminal domain  
EKC29105   0.0163   234-328   Cellulose-binding domain family II  
EKC33503   0.0143   470-509   Cellulose-binding domain family III  
EKC33672   0.0481   487-524   Cellulose-binding domain family III  
EKC38533   0.0513   277-352   Cellulose-binding domain family III  
EKC40953   0.0858   87-132   Cellulose-binding domain family II  

Lottia gigantea has 11 significant domains in 10 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Lotgi1|105466|e_gw1.4.28.1   0.00000023   13-112   Cellulose-binding domain family II  
jgi|Lotgi1|106859|e_gw1.5.37.1   0.0000000000837   3-86   Cellulose-binding domain family II  
jgi|Lotgi1|113537|e_gw1.17.12.1   0.0000000000307   30-128   Cellulose-binding domain family II  
jgi|Lotgi1|132347|e_gw1.79.25.1   0.000000000000133   42-139   Cellulose-binding domain family II  
jgi|Lotgi1|153609|fgenesh2_pg.C_sca_4000068   0.000000133   17-111   Cellulose-binding domain family II  
jgi|Lotgi1|153886|fgenesh2_pg.C_sca_4000345   0.0000000000698   26-121   Cellulose-binding domain family II  
  0.000000153   145-234   Cellulose-binding domain family II  
jgi|Lotgi1|158430|fgenesh2_pg.C_sca_17000081   0.0000495   16-108   Cellulose-binding domain family II  
jgi|Lotgi1|168843|fgenesh2_pg.C_sca_79000111   6.07e-21   3-167   Bacterial chitobiase, n-terminal domain  
jgi|Lotgi1|174972|fgenesh2_pg.C_sca_230000003   1.03e-25   63-231   Bacterial chitobiase, n-terminal domain  
jgi|Lotgi1|236342|estExt_fgenesh2_pg.C_sca_790107   2.51e-28   5-162   Bacterial chitobiase, n-terminal domain  
 
Weak hits:
jgi|Lotgi1|161687|fgenesh2_pg.C_sca_30000107   0.00016   26-114   Cellulose-binding domain family II  

Helobdella robusta has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Helro1|193429   0.00000000000335   500-601   Bacterial chitobiase, n-terminal domain  
 
Weak hits:
jgi|Helro1|182385   0.00163   88-198   Bacterial chitobiase, n-terminal domain  

Capitella sp. I has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Capca1|204144|fgenesh1_pg.C_scaffold_368000010   2.93e-16   10-163   Bacterial chitobiase, n-terminal domain  
jgi|Capca1|219964|estExt_fgenesh1_pg.C_11490004   5.34e-33   22-181   Bacterial chitobiase, n-terminal domain  
jgi|Capca1|225614|estExt_fgenesh1_pg.C_4710019   3.56e-29   71-236   Bacterial chitobiase, n-terminal domain  

Daphnia pulex has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Dappu1|243133|SNAP_00011191   0.000000000126   18-114   Cellulose-binding domain family II  
jgi|Dappu1|318190|NCBI_GNO_2400014   0.0000000167   16-111   Cellulose-binding domain family II  
jgi|Dappu1|329133|NCBI_GNO_11500025   0.0000000837   111-206   Cellulose-binding domain family II  
 
Weak hits:
jgi|Dappu1|301173|PASA_GEN_12100015   0.00638   40-106   Cellulose-binding domain family III  

Meloidogyne incognita has 14 significant domains in 14 proteins.

     

Sequence ID   Evalue   Region   Family  
gnl|MincDB|prot:Minc00168   0.0000000767   640-735   Cellulose-binding domain family II  
gnl|MincDB|prot:Minc00169a   0.0000000153   370-455   Cellulose-binding domain family II  
gnl|MincDB|prot:Minc00169b   0.0000000153   376-461   Cellulose-binding domain family II  
gnl|MincDB|prot:Minc03286   0.0000000474   605-692   Cellulose-binding domain family II  
gnl|MincDB|prot:Minc03287   0.0000000767   367-453   Cellulose-binding domain family II  
gnl|MincDB|prot:Minc09298a   0.00000000000016   405-504   Cellulose-binding domain family II  
gnl|MincDB|prot:Minc09298c   0.00000000000016   408-507   Cellulose-binding domain family II  
gnl|MincDB|prot:Minc09446a   0.0000000000000279   405-504   Cellulose-binding domain family II  
gnl|MincDB|prot:Minc09446b   0.0000000000000223   408-507   Cellulose-binding domain family II  
gnl|MincDB|prot:Minc09447b   0.0000691   408-455   Cellulose-binding domain family II  
gnl|MincDB|prot:Minc13221a   0.000000000000321   405-504   Cellulose-binding domain family II  
gnl|MincDB|prot:Minc14047a   0.0000000153   370-455   Cellulose-binding domain family II  
gnl|MincDB|prot:Minc14047b   0.0000000153   375-460   Cellulose-binding domain family II  
gnl|MincDB|prot:Minc14048   0.0000000767   602-697   Cellulose-binding domain family II  
 
Weak hits:
gnl|MincDB|prot:Minc09298b   0.000565   405-451   Cellulose-binding domain family II  
gnl|MincDB|prot:Minc13221b   0.000701   405-452   Cellulose-binding domain family II  
gnl|MincDB|prot:Minc14116   0.0942   26-108   Cellulose-binding domain family II  

Meloidogyne hapla has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
MhA1_Contig222.frz3.gene1   0.0000000000335   124-208   Cellulose-binding domain family II  
MhA1_Contig343.frz3.gene25   0.000000223   94-179   Cellulose-binding domain family II  
MhA1_Contig344.frz3.gene3   0.00000000000767   400-499   Cellulose-binding domain family II  
 
Weak hits:
MhA1_Contig1277.frz3.gene4   0.0115   138-188   Cellulose-binding domain family III  
MhA1_Contig790.frz3.gene4   0.0272   24-114   Cellulose-binding domain family II  

Mnemiopsis leidyi has 2 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
ML04072a-PA   0.00003   249-332   Cellulose-binding domain family II  
  0.0000837   3-95   Cellulose-binding domain family II  

Acropora digitifera v1.0 has 4 significant domains in 4 proteins.

     

Sequence ID   Evalue   Region   Family  
adi_v1.03986   0.000000167   4-78   Cellulose-binding domain family II  
adi_v1.05463   7.95e-35   53-224   Bacterial chitobiase, n-terminal domain  
adi_v1.18962   0.000046   1-53   Bacterial chitobiase, n-terminal domain  
adi_v1.23389   0.000000439   4-78   Cellulose-binding domain family II  
 
Weak hits:
adi_v1.16010   0.0691   2-46   Cellulose-binding domain family III  

Nematostella vectensis 1.0 has 3 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Nemve1|200452|fgenesh1_pg.scaffold_21000137   0.000000607   200-264   Bacterial chitobiase, n-terminal domain  
jgi|Nemve1|201552|fgenesh1_pg.scaffold_29000034   5.44e-34   25-196   Bacterial chitobiase, n-terminal domain  
jgi|Nemve1|241973|estExt_fgenesh1_pg.C_540058   2.41e-33   2-157   Bacterial chitobiase, n-terminal domain  

Amphimedon queenslandica has 2 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Aqu1.221884|PACid:15720412   0.0000000654   8115-8222   Cellulose-binding domain family III  
  0.00000262   4291-4387   Cellulose-binding domain family III  
  0.00141   6457-6558   Cellulose-binding domain family III  
 
Weak hits:
Aqu1.200736|PACid:15699264   0.0502   159-230   Cellulose-binding domain family III  
Aqu1.206774|PACid:15705302   0.0188   87-179   Cellulose-binding domain family III  
Aqu1.210059|PACid:15708587   0.0258   383-475   Cellulose-binding domain family III  
Aqu1.215226|PACid:15713754   0.00446   165-247   Cellulose-binding domain family III  
Aqu1.225010|PACid:15723538   0.0617   27-124   Cellulose-binding domain family III  
Aqu1.225933|PACid:15724461   0.000329   963-1056   Cellulose-binding domain family III  
  0.00209   2341-2452   Cellulose-binding domain family III  

Proterospongia sp. ATCC 50818 has 11 significant domains in 7 proteins.

     

Sequence ID   Evalue   Region   Family  
PTSG_00638T0   0.0000000173   1724-1822   Cellulose-binding domain family III  
  0.0000017   4978-5070   Cellulose-binding domain family III  
  0.0000248   3371-3452   Cellulose-binding domain family III  
PTSG_01972T0   0.000000000136   1380-1501   Cellulose-binding domain family III  
PTSG_02915T0   0.00000000445   5308-5419   Cellulose-binding domain family III  
  0.000191   2972-3076   Cellulose-binding domain family III  
PTSG_03507T0   0.0000000538   1970-2066   Cellulose-binding domain family III  
  0.068   1056-1172   Cellulose-binding domain family III  
  0.068   2702-2818   Cellulose-binding domain family III  
PTSG_03839T0   0.000000165   4040-4158   Cellulose-binding domain family III  
  0.0000105   2280-2368   Cellulose-binding domain family III  
  0.0000471   5519-5613   Cellulose-binding domain family III  
  0.0977   3202-3306   Cellulose-binding domain family III  
PTSG_07261T0   0.00000000017   1481-1602   Cellulose-binding domain family III  
PTSG_08390T0   0.00000598   3545-3668   Cellulose-binding domain family III  
 
Weak hits:
PTSG_01943T0   0.00743   4568-4678   Cellulose-binding domain family III  
PTSG_06730T0   0.00012   6079-6165   Cellulose-binding domain family III  
PTSG_06772T0   0.0223   1533-1637   Cellulose-binding domain family III  
PTSG_08442T0   0.000733   6547-6643   Cellulose-binding domain family III  
  0.0837   8193-8284   Cellulose-binding domain family III  
PTSG_09083T0   0.00122   1996-2084   Cellulose-binding domain family III  

Monosiga brevicollis has 3 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Monbr1|23706|fgenesh2_pg.scaffold_4000449   1.18e-19   2737-2863   Cellulose-binding domain family III  
jgi|Monbr1|27264|fgenesh2_pg.scaffold_18000083   0.00000000000000897   3521-3644   Cellulose-binding domain family III  
  0.00000000000000897   5306-5429   Cellulose-binding domain family III  
 
Weak hits:
jgi|Monbr1|12200|fgenesh1_pg.scaffold_36000025   0.00194   8746-8852   Cellulose-binding domain family III  
  0.0628   6975-7068   Cellulose-binding domain family III  

Sphaeroforma arctica JP610 has 4 significant domains in 3 proteins.

     

Sequence ID   Evalue   Region   Family  
SARC_00539T0   5.86e-30   24-168   Bacterial chitobiase, n-terminal domain  
  2.07e-24   877-1046   Bacterial chitobiase, n-terminal domain  
SARC_05075T0   0.0000181   199-292   Cellulose-binding domain family II  
  0.00767   564-651   Cellulose-binding domain family II  
SARC_06670T0   2.51e-27   51-201   Bacterial chitobiase, n-terminal domain  

Capsaspora owczarzaki ATCC 30864 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
CAOG_07823T0   0.000000000112   330-416   Cellulose-binding domain family II  
 
Weak hits:
CAOG_01284T0   0.00628   1349-1399   Cellulose-binding domain family III  

Spizellomyces punctatus DAOM BR117 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
SPPG_04399T0   0.0000000000000258   85-165   Cellulose-binding domain family II  

Dictyostelium discoideum has 28 significant domains in 25 proteins.

     

Sequence ID   Evalue   Region   Family  
DDB0184216|DDB_G0292090   0.0000649   74-161   Cellulose-binding domain family II  
DDB0191122|DDB_G0269112   0.00000000105   438-518   Cellulose-binding domain family II  
DDB0201652|DDB_G0291856   0.000000377   1217-1300   Cellulose-binding domain family II  
  0.000000502   1105-1190   Cellulose-binding domain family II  
DDB0203998|DDB_G0281077   0.0000000000335   241-328   Cellulose-binding domain family II  
  0.000000000142   347-438   Cellulose-binding domain family II  
DDB0204000|DDB_G0281079   0.0000000000439   239-327   Cellulose-binding domain family II  
  0.0000000000732   346-437   Cellulose-binding domain family II  
DDB0217955|DDB_G0277355   0.0000837   205-293   Cellulose-binding domain family II  
DDB0218279|DDB_G0281299   0.000000000251   217-308   Cellulose-binding domain family II  
  0.000649   153-198   Cellulose-binding domain family II  
DDB0230001|DDB_G0270190   0.0000000293   486-566   Cellulose-binding domain family II  
DDB0231127|DDB_G0294473   0.00000272   55-147   Cellulose-binding domain family II  
DDB0231128|DDB_G0280245   0.0000023   54-147   Cellulose-binding domain family II  
DDB0231129|DDB_G0287821   0.0000691   84-155   Cellulose-binding domain family II  
DDB0231131|DDB_G0287819   0.0000565   84-156   Cellulose-binding domain family II  
DDB0231132|DDB_G0277191   0.000018   60-150   Cellulose-binding domain family II  
DDB0231139|DDB_G0286647   0.00000176   179-258   Cellulose-binding domain family II  
DDB0231140|DDB_G0286663   0.000019   177-261   Cellulose-binding domain family II  
DDB0231767|DDB_G0293762   0.00000000000377   1038-1127   Cellulose-binding domain family II  
DDB0231768|DDB_G0270060   0.000000356   1039-1125   Cellulose-binding domain family II  
DDB0233051|DDB_G0294499   0.0000418   55-147   Cellulose-binding domain family II  
DDB0238288|DDB_G0282255   0.0000000000167   287-372   Cellulose-binding domain family II  
DDB0305898|DDB_G0292054   0.000000207   305-390   Cellulose-binding domain family II  
  0.000314   159-245   Cellulose-binding domain family II  
  0.000502   54-124   Cellulose-binding domain family II  
DDB0305907|DDB_G0292096   0.0000711   227-314   Cellulose-binding domain family II  
DDB0306458|DDB_G0286649   0.0000272   190-276   Cellulose-binding domain family II  
DDB0306610|DDB_G0270058   0.000000356   1039-1125   Cellulose-binding domain family II  
DDB0307732|DDB_G0282589   0.0000251   132-215   Cellulose-binding domain family II  
DDB0308027|DDB_G0280277   0.0000418   55-147   Cellulose-binding domain family II  
 
Weak hits:
DDB0188388|DDB_G0289363   0.00153   22-113   Cellulose-binding domain family II  
DDB0188831|DDB_G0290309   0.0169   68-146   Cellulose-binding domain family II  
DDB0229932|DDB_G0292218   0.00732   21-110   Cellulose-binding domain family II  
DDB0230008|DDB_G0292224   0.00523   23-113   Cellulose-binding domain family II  
DDB0231126|DDB_G0274189   0.0167   20-107   Cellulose-binding domain family II  
DDB0231133|DDB_G0284303   0.0879   39-129   Cellulose-binding domain family II  
DDB0231134|DDB_G0281233   0.000163   51-137   Cellulose-binding domain family II  
DDB0231135|DDB_G0292222   0.000153   20-113   Cellulose-binding domain family II  
DDB0231136|DDB_G0292220   0.0377   21-107   Cellulose-binding domain family II  
DDB0238239|DDB_G0278313   0.0418   59-149   Cellulose-binding domain family III  
DDB0307391|DDB_G0268106   0.0816   27-112   Cellulose-binding domain family II  
DDB0307402|DDB_G0268756   0.0837   26-115   Cellulose-binding domain family II  
DDB0307655|DDB_G0278423   0.0732   50-133   Cellulose-binding domain family II  
DDB0307656|DDB_G0278437   0.0314   50-133   Cellulose-binding domain family II  
DDB0307791|DDB_G0284287   0.00112   57-140   Cellulose-binding domain family II  
DDB0307961|DDB_G0278519   0.00165   99-190   Cellulose-binding domain family II  
DDB0307962|DDB_G0278537   0.0046   84-172   Cellulose-binding domain family II  
DDB0308293|DDB_G0293046   0.000123   85-159   Cellulose-binding domain family II  

Dictyostelium purpureum has 22 significant domains in 21 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Dicpu1|12263|gw1.278.27.1   0.00000067   50-141   Cellulose-binding domain family II  
jgi|Dicpu1|148310|GID1.0038999   0.00000565   467-553   Cellulose-binding domain family II  
jgi|Dicpu1|149279|GID1.0039968   0.0000000209   49-140   Cellulose-binding domain family II  
jgi|Dicpu1|149760|GID1.0040449   0.0000209   217-295   Cellulose-binding domain family II  
jgi|Dicpu1|152083|GID1.0042772   0.0000000983   1042-1125   Cellulose-binding domain family II  
jgi|Dicpu1|153444|GID1.0044133   0.0000193   54-143   Cellulose-binding domain family II  
jgi|Dicpu1|154318|GID1.0044972   0.000000000649   372-457   Cellulose-binding domain family II  
  0.023   225-311   Cellulose-binding domain family II  
jgi|Dicpu1|156962|GID1.0047616   0.0000000977   70-141   Cellulose-binding domain family II  
jgi|Dicpu1|157586|GID1.0048240   0.0000199   179-257   Cellulose-binding domain family II  
jgi|Dicpu1|26246|e_gw1.11.36.1   0.00000023   259-343   Cellulose-binding domain family II  
  0.000000335   385-469   Cellulose-binding domain family II  
jgi|Dicpu1|33217|e_gw1.115.18.1   0.000000418   1043-1124   Cellulose-binding domain family II  
jgi|Dicpu1|36696|e_gw1.202.37.1   0.000000418   48-141   Cellulose-binding domain family II  
jgi|Dicpu1|50740|estExt_Genewise1.C_3900003   0.00000816   53-142   Cellulose-binding domain family II  
jgi|Dicpu1|56144|estExt_Genewise1Plus.C_1770043   0.0000157   52-142   Cellulose-binding domain family II  
jgi|Dicpu1|73532|fgeneshDP_kg.C_scaffold_441000001   0.000000335   48-141   Cellulose-binding domain family II  
jgi|Dicpu1|74639|fgeneshDP_pg.C_scaffold_11000018   0.0000000921   258-342   Cellulose-binding domain family II  
jgi|Dicpu1|78730|fgeneshDP_pg.C_scaffold_115000012   0.00000000251   1036-1119   Cellulose-binding domain family II  
jgi|Dicpu1|91080|estExt_fgeneshDP_kg.C_60006   0.0000544   52-151   Cellulose-binding domain family II  
jgi|Dicpu1|91957|estExt_fgeneshDP_kg.C_1070001   0.00000123   274-361   Cellulose-binding domain family II  
  0.00121   147-247   Cellulose-binding domain family II  
  0.01   53-122   Cellulose-binding domain family II  
jgi|Dicpu1|93076|estExt_fgeneshDP_kg.C_4410004   0.000000335   48-141   Cellulose-binding domain family II  
jgi|Dicpu1|94401|estExt_fgeneshDP_pm.C_990011   0.000023   40-130   Cellulose-binding domain family II  
 
Weak hits:
jgi|Dicpu1|148513|GID1.0039202   0.0023   72-153   Cellulose-binding domain family III  
jgi|Dicpu1|150550|GID1.0041239   0.013   57-144   Cellulose-binding domain family II  
jgi|Dicpu1|152957|GID1.0043646   0.0565   134-218   Cellulose-binding domain family II  
jgi|Dicpu1|154567|GID1.0045221   0.000205   226-315   Cellulose-binding domain family II  
jgi|Dicpu1|22202|gw1.213.22.1   0.0136   44-124   Cellulose-binding domain family II  
jgi|Dicpu1|31231|e_gw1.75.66.1   0.0023   53-144   Cellulose-binding domain family II  
jgi|Dicpu1|35222|e_gw1.163.54.1   0.000105   59-153   Cellulose-binding domain family II  
jgi|Dicpu1|40441|e_gw1.337.16.1   0.0649   54-139   Cellulose-binding domain family II  
jgi|Dicpu1|40477|e_gw1.339.12.1   0.00565   71-142   Cellulose-binding domain family II  
jgi|Dicpu1|53662|estExt_Genewise1Plus.C_480043   0.0113   48-143   Cellulose-binding domain family II  
jgi|Dicpu1|57657|estExt_Genewise1Plus.C_3070015   0.00272   171-261   Cellulose-binding domain family II  
jgi|Dicpu1|59128|estExt_Genewise1Plus.C_5850003   0.000607   49-140   Cellulose-binding domain family II  
jgi|Dicpu1|77419|fgeneshDP_pg.C_scaffold_73000004   0.00103   35-127   Cellulose-binding domain family II  
jgi|Dicpu1|78182|fgeneshDP_pg.C_scaffold_96000006   0.000293   53-144   Cellulose-binding domain family II  
jgi|Dicpu1|78284|fgeneshDP_pg.C_scaffold_99000025   0.000161   60-153   Cellulose-binding domain family II  
jgi|Dicpu1|78747|fgeneshDP_pg.C_scaffold_115000029   0.0174   1029-1107   Cellulose-binding domain family II  
jgi|Dicpu1|79711|fgeneshDP_pg.C_scaffold_153000024   0.000858   61-145   Cellulose-binding domain family II  
jgi|Dicpu1|83697|fgeneshDP_pg.C_scaffold_397000001   0.000172   23-113   Cellulose-binding domain family II  
jgi|Dicpu1|91241|estExt_fgeneshDP_kg.C_190004   0.00732   91-182   Cellulose-binding domain family II  
jgi|Dicpu1|93241|estExt_fgeneshDP_kg.C_5780004   0.00795   60-156   Cellulose-binding domain family II  
jgi|Dicpu1|98184|estExt_fgeneshDP_pg.C_1530023   0.000109   58-144   Cellulose-binding domain family II  

Selaginella moellendorffii has 2 significant domains in 2 proteins.

     

Sequence ID   Evalue   Region   Family  
jgi|Selmo1|126731|e_gw1.84.175.1   0.0000167   209-274   Cellulose-binding domain family II  
jgi|Selmo1|137554|e_gw1.170.56.1   0.0000244   209-270   Cellulose-binding domain family II  
 
Weak hits:
jgi|Selmo1|174860|estExt_Genewise1Plus.C_270171   0.00384   31-94   Cellulose-binding domain family II  
jgi|Selmo1|232575|fgenesh1_pm.C_scaffold_28000048   0.00176   503-584   Cellulose-binding domain family II  
jgi|Selmo1|405727|fgenesh2_pg.C_scaffold_4000301   0.00377   31-94   Cellulose-binding domain family II  
jgi|Selmo1|99802|e_gw1.22.179.1   0.00203   546-627   Cellulose-binding domain family II  

Eucalyptus grandis v201 has 1 significant domains in 1 proteins.

     

Sequence ID   Evalue   Region   Family  
Eucgr.D01733.1|PACid:23575485   0.0000023   526-617   Cellulose-binding domain family II  
 
Weak hits:
Eucgr.A00190.1|PACid:23561904   0.000286   205-256   Cellulose-binding domain family II  
  0.0112   62-106   Cellulose-binding domain family II  
Eucgr.A00823.1|PACid:23562534   0.0418   18-95   Cellulose-binding domain family III  
Eucgr.E00858.1|PACid:23577584   0.0314   520-602   Cellulose-binding domain family II  
Eucgr.E04110.1|PACid:23580402   0.00523   192-240   Cellulose-binding domain family II  
Eucgr.F03435.1|PACid:23584515   0.00356   474-518   Cellulose-binding domain family II  
  0.067   199-255   Cellulose-binding domain family II  
Eucgr.G03365.1|PACid:23589244   0.0392   48-85   Cellulose-binding domain family III  
Eucgr.G03365.2|PACid:23589245   0.0392   48-85   Cellulose-binding domain family III  
Eucgr.G03365.3|PACid:23589246   0.0377   48-85   Cellulose-binding domain family III  
Eucgr.H04021.1|PACid:23593286   0.000516   210-261   Cellulose-binding domain family II  
  0.037   489-531   Cellulose-binding domain family II  
Eucgr.I01370.1|PACid:23595933   0.00767   34-97   Cellulose-binding domain family II  
Eucgr.I02750.1|PACid:23597548   0.0279   30-95   Cellulose-binding domain family II  
Eucgr.J01392.1|PACid:23599363   0.0858   69-131   Cellulose-binding domain family II  
Eucgr.K02541.1|PACid:23604141   0.0328   50-112   Cellulose-binding domain family II  

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Select to display   Genome       Domains   Proteins
No Yes ALL   75784 75784
No Yes Oikopleura dioica   2 2
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 76 Vase tunicate 3 3
No Yes Adineta vaga   2 2
No Yes Octopus bimaculoides 280   3 3
No Yes Crassostrea gigas 22 Pacific oyster 10 8
No Yes Lottia gigantea Owl limpet 11 10
No Yes Helobdella robusta   1 1
No Yes Capitella sp. I   3 3
No Yes Daphnia pulex Common water flea 3 3
No Yes Meloidogyne incognita Southern root-knot nematode 14 14
No Yes Meloidogyne hapla   3 3
No Yes Mnemiopsis leidyi Sea walnut 2 1
No Yes Acropora digitifera v1.0   4 4
No Yes Nematostella vectensis 1.0 Starlet sea anemone 3 3
No Yes Amphimedon queenslandica   2 1
No Yes Proterospongia sp. ATCC 50818   11 7
No Yes Monosiga brevicollis   3 2
No Yes Sphaeroforma arctica JP610   4 3
No Yes Capsaspora owczarzaki ATCC 30864   1 1
No Yes Spizellomyces punctatus DAOM BR117   1 1
No Yes Dictyostelium discoideum   28 25
No Yes Dictyostelium purpureum   22 21
No Yes Selaginella moellendorffii   2 2
No Yes Eucalyptus grandis v201 Rose gum 1 1
No Yes Citrus clementina v165   1 1
No Yes Citrus sinensis v154 Sweet orange 1 1
No Yes Thellungiella halophila v173   1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 1 1
No Yes Capsella rubella v183   1 1
No Yes Carica papaya Papaya 2 2
No Yes Phaseolus vulgaris v186 French bean 1 1
No Yes Glycine max v109 Soybean 1 1
No Yes Cucumis sativus v122 Cucumber 1 1
No Yes Fragaria vesca Wild strawberry 1 1
No Yes Malus domestica v196 Apple 3 3
No Yes Linum usitatissimum v200 Flax 7 7
No Yes Vitis vinifera Wine grape 1 1
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Solanum tuberosum Potato 1 1
No Yes Triticum aestivum 22 Bread wheat 1 1
No Yes Brachypodium distachyon Stiff brome 1 1
No Yes Oryza brachyantha 22 Malo sina 1 1
No Yes Physcomitrella patens   2 2
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Cyanophora paradoxa   1 1
No Yes Plasmodium yoelii ssp. yoelii 1   1 1
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Synechocystis sp. PCC 6803   2 1
No Yes Synechococcus sp. PCC 6312   3 2
No Yes Synechococcus sp. CC9311   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Rivularia sp. PCC 7116   3 2
No Yes Calothrix sp. PCC 7507   1 1
No Yes Nostoc sp. PCC 7524   1 1
No Yes Conexibacter woesei DSM 14684   1 1
No Yes Ilumatobacter coccineus   1 1
No Yes Acidimicrobium ferrooxidans DSM 10331   2 1
No Yes Thermobispora bispora DSM 43833   16 16
No Yes Acidothermus cellulolyticus 11B   19 10
No Yes Catenulispora acidiphila DSM 44928   33 32
No Yes Stackebrandtia nassauensis DSM 44728   2 2
No Yes Frankia sp. EAN1pec   1 1
No Yes Thermobifida fusca YX   16 15
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   14 14
No Yes Thermomonospora curvata DSM 43183   2 2
No Yes Streptosporangium roseum DSM 43021   19 17
No Yes Kitasatospora setae KM-6054   16 15
No Yes Streptomyces coelicolor A3(2)   15 15
No Yes Streptomyces sp. PAMC26508   15 15
No Yes Streptomyces flavogriseus ATCC 33331   15 15
No Yes Streptomyces sp. SirexAA-E   13 13
No Yes Streptomyces griseus subsp. griseus NBRC 13350   4 4
No Yes Streptomyces bingchenggensis BCW-1   6 6
No Yes Streptomyces violaceusniger Tu 4113   3 3
No Yes Streptomyces avermitilis MA-4680   12 12
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   4 4
No Yes Streptomyces scabiei 87.22   16 16
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   12 12
No Yes Actinosynnema mirum DSM 43827   30 30
No Yes Saccharomonospora viridis DSM 43017   1 1
No Yes Amycolatopsis mediterranei U32   32 31
No Yes Kribbella flavida DSM 17836   1 1
No Yes Nocardioides sp. JS614   3 1
No Yes Salinispora arenicola CNS-205   6 6
No Yes Salinispora tropica CNB-440   7 7
No Yes Verrucosispora maris AB-18-032   36 35
No Yes Micromonospora sp. L5   43 42
No Yes Micromonospora aurantiaca ATCC 27029   43 42
No Yes Actinoplanes sp. N902-109   46 45
No Yes Actinoplanes sp. SE50/110   27 27
No Yes Actinoplanes missouriensis 431   24 23
No Yes Mycobacterium massiliense str. GO 06   1 1
No Yes Mycobacterium abscessus ATCC 19977   1 1
No Yes Mycobacterium intracellulare ATCC 13950   1 1
No Yes Mycobacterium avium 104   1 1
No Yes Mycobacterium vanbaalenii PYR-1   2 1
No Yes Mycobacterium canettii CIPT 140010059   1 1
No Yes Mycobacterium africanum GM041182   2 2
No Yes Mycobacterium tuberculosis KZN 1435   2 2
No Yes Mycobacterium tuberculosis   1 1
No Yes Mycobacterium ulcerans Agy99   5 3
No Yes Mycobacterium gilvum PYR-GCK   2 1
No Yes Mycobacterium marinum M   5 3
No Yes Leifsonia xyli subsp. xyli str. CTCB07   1 1
No Yes Microbacterium testaceum StLB037   2 2
No Yes Clavibacter michiganensis subsp. michiganensis NCPPB 382   2 2
No Yes Jonesia denitrificans DSM 20603   11 10
No Yes Xylanimonas cellulosilytica DSM 15894   8 8
No Yes Cellulomonas flavigena DSM 20109   39 35
No Yes Cellulomonas fimi ATCC 484   20 18
No Yes [Cellvibrio] gilvus ATCC 13127   19 17
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   2 2
No Yes Herpetosiphon aurantiacus DSM 785   15 14
No Yes Chloroflexus aggregans DSM 9485   2 1
No Yes Deinococcus maricopensis DSM 21211   2 2
No Yes Clostridium clariflavum DSM 19732   74 27
No Yes Eubacterium siraeum   2 2
No Yes Clostridium cellulolyticum H10   22 12
No Yes Clostridium thermocellum ATCC 27405   53 28
No Yes Ruminococcus bromii   4 4
No Yes Ruminococcus albus 7   11 10
No Yes butyrate-producing bacterium SS3/4   1 1
No Yes butyrate-producing bacterium SM4/1   1 1
No Yes Desulfosporosinus orientis DSM 765   1 1
No Yes Desulfitobacterium hafniense Y51   1 1
No Yes Desulfitobacterium dehalogenans ATCC 51507   1 1
No Yes Desulfotomaculum acetoxidans DSM 771   5 2
No Yes Acetobacterium woodii DSM 1030   2 2
No Yes Eubacterium eligens ATCC 27750   2 2
No Yes Eubacterium limosum KIST612   2 2
No Yes Clostridium saccharolyticum WM1   2 2
No Yes Clostridium phytofermentans ISDg   6 5
No Yes Clostridium lentocellum DSM 5427   28 22
No Yes [Ruminococcus] torques   1 1
No Yes Eubacterium rectale M104/1   2 1
No Yes Eubacterium rectale ATCC 33656   3 2
No Yes Coprococcus sp. ART55/1   2 2
No Yes Roseburia hominis A2-183   1 1
No Yes Butyrivibrio proteoclasticus B316   11 8
No Yes Butyrivibrio fibrisolvens   11 10
No Yes Candidatus Arthromitus sp. SFB-mouse-Japan   1 1
No Yes Clostridium sp. BNL1100   19 11
No Yes Clostridium ljungdahlii DSM 13528   1 1
No Yes Clostridium perfringens ATCC 13124   5 5
No Yes Clostridium cellulovorans 743B   27 17
No Yes Clostridium botulinum A str. ATCC 3502   1 1
No Yes Clostridium acetobutylicum ATCC 824   9 4
No Yes Mahella australiensis 50-1 BON   2 2
No Yes Caldicellulosiruptor obsidiansis OB47   10 4
No Yes Caldicellulosiruptor kronotskyensis 2002   16 8
No Yes Caldicellulosiruptor lactoaceticus 6A   16 6
No Yes Caldicellulosiruptor kristjanssonii 177R1B   6 3
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   12 6
No Yes Caldicellulosiruptor bescii DSM 6725   16 7
No Yes Tepidanaerobacter acetatoxydans Re1   1 1
No Yes Acetohalobium arabaticum DSM 5501   1 1
No Yes Halothermothrix orenii H 168   1 1
No Yes Halanaerobium hydrogeniformans   1 1
No Yes Halanaerobium praevalens DSM 2228   1 1
No Yes Lactobacillus casei ATCC 334   1 1
No Yes Lactobacillus plantarum JDM1   1 1
No Yes Paenibacillus sp. JDR-2   20 19
No Yes Paenibacillus terrae HPL-003   5 5
No Yes Paenibacillus mucilaginosus 3016   13 13
No Yes Paenibacillus polymyxa M1   5 5
No Yes Bacillus selenitireducens MLS10   1 1
No Yes Solibacillus silvestris StLB046   1 1
No Yes Oceanobacillus iheyensis HTE831   1 1
No Yes Bacillus sp. JS   1 1
No Yes Bacillus amyloliquefaciens FZB42   1 1
No Yes Bacillus subtilis subsp. subtilis str. 168   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   2 2
No Yes Bacillus weihenstephanensis KBAB4   1 1
No Yes Bacillus thuringiensis str. Al Hakam   3 3
No Yes Bacillus cereus 03BB102   3 3
No Yes Bacillus anthracis str. A0248   1 1
No Yes Bacillus pumilus SAFR-032   1 1
No Yes Candidatus Cloacamonas acidaminovorans   3 2
No Yes Melioribacter roseus P3M   5 3
No Yes Haliscomenobacter hydrossis DSM 1100   34 28
No Yes Niastella koreensis GR20-10   4 2
No Yes Chitinophaga pinensis DSM 2588   1 1
No Yes Salinibacter ruber M8   2 2
No Yes Rhodothermus marinus DSM 4252   1 1
No Yes Cyclobacterium marinum DSM 745   1 1
No Yes Fibrella aestuarina   4 2
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Spirosoma linguale DSM 74   4 3
No Yes Runella slithyformis DSM 19594   2 2
No Yes Prevotella melaninogenica ATCC 25845   1 1
No Yes Bacteroides thetaiotaomicron VPI-5482   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Pedobacter saltans DSM 12145   1 1
No Yes Solitalea canadensis DSM 3403   2 2
No Yes Sphingobacterium sp. 21   1 1
No Yes Robiginitalea biformata HTCC2501   1 1
No Yes Ornithobacterium rhinotracheale DSM 15997   1 1
No Yes Capnocytophaga canimorsus Cc5   1 1
No Yes Rhodopirellula baltica SH 1   1 1
No Yes Akkermansia muciniphila ATCC BAA-835   1 1
No Yes Spirochaeta thermophila DSM 6192   2 2
No Yes Marinitoga piezophila KA3   2 2
No Yes Mesotoga prima MesG1.Ag.4.2   2 2
No Yes Kosmotoga olearia TBF 19.5.1   1 1
No Yes Thermosipho melanesiensis BI429   1 1
No Yes Caldisericum exile AZM16c01   2 2
No Yes Candidatus Chloracidobacterium thermophilum B   1 1
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Granulicella tundricola MP5ACTX9   1 1
No Yes Granulicella mallensis MP5ACTX8   2 2
No Yes Candidatus Koribacter versatilis Ellin345   1 1
No Yes Terriglobus saanensis SP1PR4   2 2
No Yes Terriglobus roseus DSM 18391   3 3
No Yes Acidobacterium capsulatum ATCC 51196   1 1
No Yes Candidatus Nitrospira defluvii   1 1
No Yes candidate division SR1 bacterium RAAC1_SR1_1   1 1
No Yes Syntrophobacter fumaroxidans MPOB   2 2
No Yes Desulfatibacillum alkenivorans AK-01   6 6
No Yes Desulfococcus oleovorans Hxd3   2 2
No Yes Geobacter daltonii FRC-32   2 2
No Yes Geobacter sp. M21   2 2
No Yes Geobacter uraniireducens Rf4   3 3
No Yes Geobacter lovleyi SZ   1 1
No Yes Geobacter bemidjiensis Bem   3 3
No Yes Geobacter sulfurreducens KN400   2 2
No Yes Geobacter metallireducens GS-15   3 3
No Yes Pelobacter carbinolicus DSM 2380   1 1
No Yes Haliangium ochraceum DSM 14365   2 2
No Yes Sorangium cellulosum 'So ce 56'   9 9
No Yes Stigmatella aurantiaca DW4/3-1   7 7
No Yes Chromobacterium violaceum ATCC 12472   1 1
No Yes Leptothrix cholodnii SP-6   1 1
No Yes Ralstonia solanacearum CFBP2957   3 3
No Yes Burkholderia sp. RPE64   1 1
No Yes Burkholderia thailandensis E264   1 1
No Yes Burkholderia pseudomallei 1106a   1 1
No Yes Burkholderia mallei SAVP1   1 1
No Yes Burkholderia ambifaria AMMD   1 1
No Yes Burkholderia cenocepacia HI2424   1 1
No Yes Burkholderia vietnamiensis G4   1 1
No Yes Burkholderia gladioli BSR3   2 2
No Yes Acidovorax citrulli AAC00-1   2 2
No Yes Acidovorax avenae subsp. avenae ATCC 19860   2 2
No Yes Nitrosospira multiformis ATCC 25196   1 1
No Yes Nitrosomonas sp. Is79A3   1 1
No Yes Nitrosomonas eutropha C91   1 1
No Yes Nitrosomonas europaea ATCC 19718   1 1
No Yes Sideroxydans lithotrophicus ES-1   1 1
No Yes Methylotenera versatilis 301   1 1
No Yes Asticcacaulis excentricus CB 48   1 1
No Yes Azorhizobium caulinodans ORS 571   2 1
No Yes Saccharophagus degradans 2-40   20 19
No Yes Teredinibacter turnerae T7901   28 27
No Yes Cellvibrio japonicus Ueda107   25 24
No Yes Aeromonas veronii B565   1 1
No Yes Aeromonas salmonicida subsp. salmonicida A449   2 2
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   1 1
No Yes Aliivibrio salmonicida LFI1238   1 1
No Yes Vibrio fischeri MJ11   1 1
No Yes Vibrio sp. Ex25   1 1
No Yes Vibrio harveyi ATCC BAA-1116   1 1
No Yes Vibrio parahaemolyticus RIMD 2210633   1 1
No Yes Vibrio splendidus LGP32   1 1
No Yes Vibrio anguillarum 775   1 1
No Yes Vibrio furnissii NCTC 11218   1 1
No Yes Vibrio vulnificus MO6-24/O   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Photobacterium profundum SS9   2 2
No Yes Ferrimonas balearica DSM 9799   1 1
No Yes Shewanella piezotolerans WP3   1 1
No Yes Shewanella loihica PV-4   1 1
No Yes Shewanella halifaxensis HAW-EB4   1 1
No Yes Shewanella sediminis HAW-EB3   1 1
No Yes Shewanella denitrificans OS217   1 1
No Yes Shewanella pealeana ATCC 700345   1 1
No Yes Shewanella oneidensis MR-1   1 1
No Yes Shewanella baltica OS185   2 2
No Yes Shewanella woodyi ATCC 51908   2 2
No Yes Shewanella sp. MR-4   1 1
No Yes Shewanella amazonensis SB2B   1 1
No Yes Shewanella violacea DSS12   5 5
No Yes Shewanella putrefaciens CN-32   1 1
No Yes Colwellia psychrerythraea 34H   2 2
No Yes Pseudoalteromonas sp. SM9913   1 1
No Yes Pseudoalteromonas atlantica T6c   4 4
No Yes Glaciecola sp. 4H-3-7+YE-5   2 2
No Yes Alteromonas sp. SN2   1 1
No Yes Hahella chejuensis KCTC 2396   11 10
No Yes Methylomonas methanica MC09   1 1
No Yes Methylococcus capsulatus str. Bath   6 3
No Yes Xylella fastidiosa M23   2 2
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas albilineans GPE PC73   5 5
No Yes Xanthomonas oryzae pv. oryzae PXO99A   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Nitrosococcus watsonii C-113   1 1
No Yes Photorhabdus asymbiotica   1 1
No Yes Photorhabdus luminescens subsp. laumondii TTO1   1 1
No Yes Xenorhabdus bovienii SS-2004   1 1
No Yes Xenorhabdus nematophila ATCC 19061   1 1
No Yes Providencia stuartii MRSN 2154   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Edwardsiella tarda EIB202   1 1
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia pestis Pestoides F   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   1 1
No Yes Serratia sp. AS12   1 1
No Yes Serratia plymuthica AS9   1 1
No Yes Serratia proteamaculans 568   1 1
No Yes Pectobacterium wasabiae WPP163   1 1
No Yes Pectobacterium sp. SCC3193   1 1
No Yes Pectobacterium atrosepticum SCRI1043   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   1 1
No Yes Pantoea sp. At-9b   1 1
No Yes Pantoea vagans C9-1   1 1
No Yes Erwinia billingiae Eb661   1 1
No Yes Escherichia blattae DSM 4481   1 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Cronobacter sakazakii ES15   1 1
No Yes Enterobacter sp. R4-368   1 1
No Yes Pyrobaculum islandicum DSM 4184   1 1
No Yes Methanococcoides burtonii DSM 6242   3 3
No Yes Methanosarcina acetivorans C2A   2 2
No Yes Methanosarcina mazei Go1   2 2
No Yes Methanohalophilus mahii DSM 5219   2 2
No Yes Methanosphaerula palustris E1-9c   6 5
No Yes Methanospirillum hungatei JF-1   3 3
No Yes Methanoplanus petrolearius DSM 11571   1 1
No Yes Methanoculleus bourgensis MS2   3 3
No Yes Ferroglobus placidus DSM 10642   1 1
No Yes Archaeoglobus fulgidus DSM 4304   2 2
No Yes Thermococcus kodakarensis KOD1   2 1
No Yes Pyrococcus furiosus COM1   1 1
No Yes Salinarchaeum sp. Harcht-Bsk1   1 1
No Yes Halopiger xanaduensis SH-6   2 2
No Yes Haloterrigena turkmenica DSM 5511   2 2
No Yes Natrinema sp. J7-2   1 1
No Yes Natrialba magadii ATCC 43099   3 3
No Yes Halogeometricum borinquense DSM 11551   1 1
No Yes Haloferax mediterranei ATCC 33500   1 1
No Yes Halorhabdus utahensis DSM 12940   2 2
No Yes Natronomonas pharaonis DSM 2160   4 4
No Yes Haloarcula hispanica ATCC 33960   1 1
No Yes Haloarcula marismortui ATCC 43049   3 3
No Yes Methanotorris igneus Kol 5   6 3
No Yes methanocaldococcus infernus ME   4 3
No Yes Methanothermococcus okinawensis IH1   8 5
No Yes Methanococcus aeolicus Nankai-3   4 3
No Yes Methanococcus maripaludis C5   1 1
No Yes Methanococcus voltae A3   3 2
No Yes Methanococcus vannielii SB   4 3
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   2 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   2 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   2 1
No Yes Synechocystis sp. PCC 6803   2 1
No Yes Cyanobium gracile PCC 6307   1 1
No Yes Synechococcus sp. RCC307   4 2
No Yes Synechococcus sp. WH 7803   5 3
No Yes Prochlorococcus marinus str. MIT 9303   4 2
No Yes Cyanobacterium aponinum PCC 10605   3 1
No Yes Stanieria cyanosphaera PCC 7437   6 5
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Adlercreutzia equolifaciens DSM 19450   1 1
No Yes Frankia sp. EuI1c   1 1
No Yes Nocardiopsis alba ATCC BAA-2165   3 3
No Yes Streptomyces albus J1074   3 3
No Yes Streptomyces rapamycinicus NRRL 5491   5 5
No Yes Streptomyces davawensis JCM 4913   17 17
No Yes Streptomyces fulvissimus DSM 40593   6 6
No Yes Streptomyces venezuelae ATCC 10712   9 9
No Yes Streptomyces collinus Tu 365   6 6
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   4 4
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   12 12
No Yes Saccharothrix espanaensis DSM 44229   8 7
No Yes Amycolatopsis mediterranei RB   32 31
No Yes Amycolatopsis mediterranei S699   32 31
No Yes Amycolatopsis mediterranei S699   32 31
No Yes Amycolatopsis orientalis HCCB10007   6 6
No Yes Actinoplanes friuliensis DSM 7358   32 32
No Yes Mycobacterium abscessus subsp. bolletii 50594   1 1
No Yes Mycobacterium liflandii 128FXT   1 1
No Yes Mycobacterium avium subsp. paratuberculosis MAP4   1 1
No Yes Mycobacterium avium subsp. paratuberculosis K-10   1 1
No Yes Mycobacterium canettii CIPT 140070017   1 1
No Yes Mycobacterium canettii CIPT 140060008   2 2
No Yes Mycobacterium canettii CIPT 140070008   2 2
No Yes Mycobacterium canettii CIPT 140070010   1 1
No Yes Mycobacterium tuberculosis EAI5/NITR206   1 1
No Yes Mycobacterium tuberculosis EAI5   2 2
No Yes Mycobacterium tuberculosis CAS/NITR204   1 1
No Yes Mycobacterium tuberculosis str. Beijing/NITR203   1 1
No Yes Mycobacterium tuberculosis UT205   1 1
No Yes Mycobacterium tuberculosis RGTB423   1 1
No Yes Mycobacterium tuberculosis RGTB327   1 1
No Yes Mycobacterium tuberculosis CTRI-2   2 2
No Yes Mycobacterium tuberculosis str. Erdman = ATCC 35801   1 1
No Yes Mycobacterium tuberculosis KZN 605   2 2
No Yes Mycobacterium tuberculosis KZN 4207   2 2
No Yes Mycobacterium tuberculosis CCDC5079   2 2
No Yes Mycobacterium tuberculosis CCDC5079   2 2
No Yes Mycobacterium tuberculosis H37Ra   1 1
No Yes Mycobacterium tuberculosis str. Haarlem/NITR202   1 1
No Yes Mycobacterium tuberculosis str. Haarlem   2 2
No Yes Mycobacterium tuberculosis F11   2 2
No Yes Mycobacterium tuberculosis H37Rv   1 1
No Yes Mycobacterium tuberculosis CDC1551   2 2
No Yes Mycobacterium bovis AF2122/97   2 2
No Yes Mycobacterium bovis BCG str. Tokyo 172   1 1
No Yes Mycobacterium gilvum Spyr1   2 1
No Yes Mycobacterium kansasii ATCC 12478   2 2
No Yes Clavibacter michiganensis subsp. sepedonicus   1 1
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   2 2
No Yes Bifidobacterium thermophilum RBL67   3 2
No Yes Eubacterium siraeum V10Sc8a   2 2
No Yes Clostridium thermocellum DSM 1313   47 28
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   3 2
No Yes Ruminococcus champanellensis 18P13   15 12
No Yes Desulfosporosinus meridiei DSM 13257   1 1
No Yes Desulfitobacterium hafniense DCB-2   1 1
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   1 1
No Yes Candidatus Arthromitus sp. SFB-rat-Yit   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Yit   1 1
No Yes Clostridium saccharobutylicum DSM 13864   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   6 3
No Yes Clostridium perfringens SM101   1 1
No Yes Clostridium perfringens str. 13   5 5
No Yes Clostridium botulinum H04402 065   1 1
No Yes Clostridium botulinum F str. 230613   1 1
No Yes Clostridium botulinum F str. Langeland   1 1
No Yes Clostridium botulinum B1 str. Okra   1 1
No Yes Clostridium botulinum A2 str. Kyoto   1 1
No Yes Clostridium botulinum A3 str. Loch Maree   1 1
No Yes Clostridium botulinum A str. Hall   1 1
No Yes Clostridium botulinum A str. ATCC 19397   1 1
No Yes Clostridium acetobutylicum DSM 1731   9 4
No Yes Clostridium acetobutylicum EA 2018   9 4
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   2 1
No Yes Halobacteroides halobius DSM 5150   1 1
No Yes Enterococcus faecalis OG1RF   1 1
No Yes Enterococcus faecalis V583   1 1
No Yes Lactobacillus plantarum 16   1 1
No Yes Lactobacillus plantarum ZJ316   1 1
No Yes Lactobacillus plantarum subsp. plantarum ST-III   1 1
No Yes Lactobacillus plantarum subsp. plantarum P-8   1 1
No Yes Lactobacillus plantarum WCFS1   1 1
No Yes Thermobacillus composti KWC4   2 2
No Yes Paenibacillus sp. Y412MC10   1 1
No Yes Paenibacillus mucilaginosus KNP414   13 13
No Yes Paenibacillus mucilaginosus K02   14 14
No Yes Paenibacillus polymyxa CR1   4 4
No Yes Paenibacillus polymyxa SC2   5 5
No Yes Paenibacillus polymyxa E681   5 5
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5033   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5113   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum UCMB5036   1 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   1 1
No Yes Bacillus amyloliquefaciens LFB112   1 1
No Yes Bacillus amyloliquefaciens CC178   1 1
No Yes Bacillus amyloliquefaciens Y2   1 1
No Yes Bacillus amyloliquefaciens IT-45   1 1
No Yes Bacillus licheniformis 9945A   2 2
No Yes Bacillus subtilis PY79   1 1
No Yes Bacillus subtilis XF-1   1 1
No Yes Bacillus subtilis QB928   1 1
No Yes Bacillus subtilis BSn5   1 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   1 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   1 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   1 1
No Yes Bacillus subtilis subsp. subtilis 6051-HGW   1 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   1 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   1 1
No Yes Bacillus subtilis subsp. natto BEST195   1 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   2 2
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   1 1
No Yes Bacillus toyonensis BCT-7112   3 3
No Yes Bacillus thuringiensis HD-771   1 1
No Yes Bacillus thuringiensis HD-789   1 1
No Yes Bacillus thuringiensis MC28   2 2
No Yes Bacillus thuringiensis serovar chinensis CT-43   1 1
No Yes Bacillus thuringiensis YBT-1518   1 1
No Yes Bacillus thuringiensis Bt407   1 1
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   1 1
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   1 1
No Yes Bacillus thuringiensis BMB171   1 1
No Yes Bacillus thuringiensis serovar finitimus YBT-020   1 1
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   1 1
No Yes Bacillus cereus FRI-35   3 3
No Yes Bacillus cereus biovar anthracis str. CI   3 3
No Yes Bacillus cereus AH820   1 1
No Yes Bacillus cereus AH187   2 2
No Yes Bacillus cereus B4264   2 2
No Yes Bacillus cereus G9842   1 1
No Yes Bacillus cereus Q1   2 2
No Yes Bacillus cereus F837/76   3 3
No Yes Bacillus cereus NC7401   2 2
No Yes Bacillus cereus E33L   2 2
No Yes Bacillus cereus ATCC 14579   1 1
No Yes Bacillus cereus ATCC 10987   2 2
No Yes Bacillus anthracis str. H9401   1 1
No Yes Bacillus anthracis str. CDC 684   1 1
No Yes Bacillus anthracis str. 'Ames Ancestor'   1 1
No Yes Bacillus anthracis str. Sterne   1 1
No Yes Bacillus anthracis str. Ames   1 1
No Yes Salinibacter ruber DSM 13855   2 2
No Yes Rhodothermus marinus SG0.5JP17-172   4 3
No Yes Echinicola vietnamensis DSM 17526   2 1
No Yes Bacteroides xylanisolvens XB1A   2 2
No Yes Bacteroides fragilis 638R   1 1
No Yes Bacteroides fragilis NCTC 9343   1 1
No Yes Spirochaeta thermophila DSM 6578   2 2
No Yes Geobacter sp. M18   2 2
No Yes Geobacter sulfurreducens PCA   2 2
No Yes Sorangium cellulosum So0157-2   9 9
No Yes Myxococcus stipitatus DSM 14675   1 1
No Yes Ralstonia solanacearum FQY_4   2 2
No Yes Ralstonia solanacearum Po82   2 2
No Yes Ralstonia solanacearum PSI07   1 1
No Yes Ralstonia solanacearum GMI1000   3 3
No Yes Burkholderia sp. YI23   1 1
No Yes Burkholderia sp. KJ006   1 1
No Yes Burkholderia thailandensis MSMB121   1 1
No Yes Burkholderia pseudomallei MSHR305   1 1
No Yes Burkholderia pseudomallei NCTC 13179   1 1
No Yes Burkholderia pseudomallei BPC006   1 1
No Yes Burkholderia pseudomallei 1026b   1 1
No Yes Burkholderia pseudomallei MSHR346   1 1
No Yes Burkholderia pseudomallei 668   1 1
No Yes Burkholderia pseudomallei 1710b   1 1
No Yes Burkholderia pseudomallei K96243   1 1
No Yes Burkholderia mallei NCTC 10229   1 1
No Yes Burkholderia mallei NCTC 10247   1 1
No Yes Burkholderia mallei ATCC 23344   1 1
No Yes Burkholderia lata   1 1
No Yes Burkholderia ambifaria MC40-6   1 1
No Yes Burkholderia cenocepacia MC0-3   1 1
No Yes Burkholderia cenocepacia AU 1054   1 1
No Yes Burkholderia cenocepacia J2315   1 1
No Yes Nitrosomonas sp. AL212   1 1
No Yes Simiduia agarivorans SA1 = DSM 21679   4 3
No Yes Aeromonas hydrophila ML09-119   1 1
No Yes Vibrio fischeri ES114   1 1
No Yes Vibrio sp. EJY3   1 1
No Yes Vibrio parahaemolyticus BB22OP   1 1
No Yes Vibrio alginolyticus NBRC 15630 = ATCC 17749   1 1
No Yes Vibrio anguillarum Listonella anguillarum M3   1 1
No Yes Vibrio nigripulchritudo VibrioScope   1 1
No Yes Vibrio vulnificus CMCP6   1 1
No Yes Vibrio vulnificus YJ016   1 1
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Vibrio cholerae O1 biovar El Tor str. N16961   1 1
No Yes Shewanella sp. W3-18-1   1 1
No Yes Shewanella sp. ANA-3   1 1
No Yes Shewanella baltica BA175   2 2
No Yes Shewanella baltica OS678   2 2
No Yes Shewanella baltica OS117   1 1
No Yes Shewanella baltica OS223   2 2
No Yes Shewanella baltica OS195   2 2
No Yes Shewanella baltica OS155   1 1
No Yes Shewanella sp. MR-7   1 1
No Yes Shewanella putrefaciens 200   1 1
No Yes Alteromonas macleodii str. 'English Channel 673'   1 1
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   2 2
No Yes Alteromonas macleodii str. 'Black Sea 11'   1 1
No Yes Alteromonas macleodii ATCC 27126   1 1
No Yes Alcanivorax dieselolei B5   1 1
No Yes Xylella fastidiosa subsp. fastidiosa GB514   2 2
No Yes Xylella fastidiosa M12   1 1
No Yes Xylella fastidiosa Temecula1   2 2
No Yes Xylella fastidiosa 9a5c   2 2
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas oryzae pv. oryzicola BLS256   1 1
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   1 1
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Edwardsiella tarda C07-087   1 1
No Yes Edwardsiella tarda FL6-60   1 1
No Yes Yersinia pseudotuberculosis PB1/+   1 1
No Yes Yersinia pseudotuberculosis YPIII   1 1
No Yes Yersinia pseudotuberculosis IP 32953   1 1
No Yes Yersinia pestis A1122   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis Nepal516   1 1
No Yes Yersinia pestis Antiqua   1 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   1 1
No Yes Serratia sp. AS13   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Serratia plymuthica 4Rx13   1 1
No Yes Serratia marcescens FGI94   1 1
No Yes Serratia marcescens WW4   1 1
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   1 1
No Yes Cronobacter sakazakii CMCC 45402   1 1
No Yes Cronobacter sakazakii SP291   1 1
No Yes Cronobacter sakazakii ATCC BAA-894   1 1
No Yes Methanolobus psychrophilus R15   3 3
No Yes Methanosarcina mazei Tuc01   2 2
No Yes Archaeoglobus sulfaticallidus PM70-1   5 4
No Yes Pyrococcus furiosus DSM 3638   1 1
No Yes Natrinema pellirubrum DSM 15624   1 1
No Yes Natronococcus occultus SP4   1 1
No Yes Natronobacterium gregoryi SP2   2 2
No Yes Halorhabdus tiamatea SARL4B   1 1
No Yes Haloarcula hispanica N601   1 1
No Yes Methanococcus maripaludis X1   4 3
No Yes Malus x domestica (Duplicate) Apple 3 3
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   1 1
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Mycobacterium tuberculosis H37Rv (Duplicate of ex)   1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 69 Vase tunicate 3 3
No Yes 2_050719S (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   3 3
No Yes 4_Deep_abyss (meta-genome)   2 2
No Yes 5_050719P (meta-genome)   2 2
No Yes 5_Below_upper_mesopelagic (meta-genome)   2 2
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Anaerobic methane oxidation (AOM) community from Eel River Basin sediment, California (meta-genome)   1 1
No Yes Bath Hot Springs, planktonic community (meta-genome)   1 1
No Yes Combined (meta-genome)   4 4
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   3 3
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   1 1
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   4 4
No Yes Dump bottom (Dump bottom) (meta-genome)   9 9
No Yes Dump top (Dump top) (meta-genome)   16 16
No Yes Endophytic microbiome from Rice (meta-genome)   3 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   5 5
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   6 5
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   1 1
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   3 3
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   2 2
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   1 1
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   5 5
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   4 3
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   6 6
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   2 2
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   14 13
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   16 16
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   14 13
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   4 4
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   5 5
No Yes Human Gut Community Subject 7 (meta-genome)   6 6
No Yes Human Gut Community Subject 8 (meta-genome)   11 11
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   5 5
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   10 10
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   4 4
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   40 39
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   16 15
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   9 9
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   10 10
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   4 4
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   7 7
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes Mouse Gut Community lean3 (meta-genome)   1 1
No Yes Mouse Gut Community ob1 (meta-genome)   2 1
No Yes NCBI 2017_08 genome   46595 44691
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   26 26
No Yes Protozoadb 2010_08 (Protozoadb)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   20 20
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   17 17
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   17 17
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   10 6
No Yes Sludge/US, Jazz Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   2 2
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   22 22
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   35 35
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   52 52
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   22 22
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   23 23
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   18 18
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   18 18
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   7 7
No Yes STRING v9.0.5 (STRING)   804 695
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   3 3
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   11 11
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   5 5
No Yes Uniprot 2018_03 genome   22690 20914
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   15 14
No Yes Global Ocean Sampling Expedition (GOS)   391 357
No Yes NCBI plasmid sequences (Plasmids)   27 27
No Yes NCBI viral sequences (Viral)   7 6
No Yes PDB chains (SCOP 1.75) (PDB)   26 26
No Yes Protein Data Bank (all PDB sequenc)   167 163
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   382 382
No Yes TargetDB (Targets)   80 41
No Yes UniProt viral sequences (Viral)   7 7

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