Select to display Genome Domains Proteins
No Yes ALL 199238 199238
No Yes Pongo abelii 76_2 Sumatran orangutan 1 1
No Yes Macaca mulatta 76_1 Rhesus monkey 1 1
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 2 2
No Yes Bos taurus 76_3.1 Cattle 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 1 1
No Yes Ailuropoda melanoleuca 76_1 Giant panda 1 1
No Yes Pteropus vampyrus 76_1 Large flying fox 1 1
No Yes Saccoglossus kowalevskii v3.0 2 2
No Yes Petromyzon marinus 76_7.0 Sea lamprey 1 1
No Yes Latimeria chalumnae 76_1 Coelacanth 1 1
No Yes Oikopleura dioica 1 1
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 2 2
No Yes Ciona intestinalis 76 Vase tunicate 1 1
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Adineta vaga 4 3
No Yes Octopus bimaculoides 280 1 1
No Yes Crassostrea gigas 22 Pacific oyster 1 1
No Yes Lottia gigantea Owl limpet 1 1
No Yes Helobdella robusta 1 1
No Yes Capitella sp. I 1 1
No Yes Danaus plexippus OGS1.0 Monarch butterfly 1 1
No Yes Heliconius melpomene Postman butterfly 2 1
No Yes Bombyx mori Domestic silkworm 1 1
No Yes Nasonia vitripennis Jewel wasp 2 1
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 3 3
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 1 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 3 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 1 1
No Yes Atta cephalotes v1.1 2 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 4 1
No Yes Lucilia cuprina Australian sheep blowfly 3 1
No Yes Drosophila willistoni 1.3 1 1
No Yes Drosophila yakuba 1.3 1 1
No Yes Drosophila simulans 1.3 1 1
No Yes Drosophila sechellia 1.3 1 1
No Yes Drosophila melanogaster 76_5 Fruit fly 1 1
No Yes Drosophila erecta 1.3 1 1
No Yes Drosophila ananassae 1.3 1 1
No Yes Drosophila mojavensis 1.3 1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 3 1
No Yes Culex pipiens quinquefasciatus Southern house mosquito 3 1
No Yes Anopheles darlingi 22 American malaria mosquito 2 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 2 1
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 3 1
No Yes Rhodnius prolixus 22 1 1
No Yes Daphnia pulex Common water flea 1 1
No Yes Sarcoptes scabiei 2 1
No Yes Pristionchus pacificus 1 1
No Yes Meloidogyne hapla 1 1
No Yes Caenorhabditis remanei 1 1
No Yes Trichinella spiralis 22 2 1
No Yes Schistosoma mansoni 1 1
No Yes Mnemiopsis leidyi Sea walnut 1 1
No Yes Hydra vulgaris 1 1
No Yes Trichoplax adhaerens 1 1
No Yes Monosiga brevicollis 2 2
No Yes Sphaeroforma arctica JP610 63 20
No Yes Dictyostelium discoideum 3 2
No Yes Dictyostelium purpureum 1 1
No Yes Selaginella moellendorffii 8 3
No Yes Eucalyptus grandis v201 Rose gum 2 1
No Yes Theobroma cacao B97-61/B2 v1 Cacao 2 1
No Yes Gossypium raimondii v221 6 3
No Yes Citrus clementina v165 2 1
No Yes Citrus sinensis v154 Sweet orange 9 5
No Yes Thellungiella halophila v173 2 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 2 1
No Yes Capsella rubella v183 2 1
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Carica papaya Papaya 2 1
No Yes Medicago truncatula Barrel medic 2 1
No Yes Phaseolus vulgaris v186 French bean 2 1
No Yes Glycine max v109 Soybean 7 4
No Yes Cucumis sativus v122 Cucumber 4 3
No Yes Fragaria vesca Wild strawberry 3 1
No Yes Malus domestica v196 Apple 4 3
No Yes Prunus persica v139 Peach 2 1
No Yes Populus trichocarpa v156 Black cottonwood 4 4
No Yes Vitis vinifera Wine grape 1 1
No Yes Mimulus guttatus v140 Spotted monkey flower 2 1
No Yes Solanum lycopersicum v.2.3 Tomato 2 1
No Yes Actinidia chinensis Hongyang 2 1
No Yes Aquilegia coerulea v195 7 7
No Yes Triticum urartu 22 1 1
No Yes Triticum aestivum 22 Bread wheat 3 3
No Yes Aegilops tauschii 22 1 1
No Yes Brachypodium distachyon Stiff brome 2 1
No Yes Oryza barthii 22 African wild rice 3 1
No Yes Oryza glumaepatula 22 3 1
No Yes Oryza glaberrima African rice 3 1
No Yes Oryza punctata 22 3 1
No Yes Oryza nivara 22 3 1
No Yes Oryza brachyantha 22 Malo sina 3 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 3 1
No Yes Oryza sativa v193 Rice 3 1
No Yes Phyllostachys heterocycla var. pubescens Kikko-chiku 5 2
No Yes Panicum virgatum v202 Switchgrass 2 2
No Yes Setaria italica v164 Foxtail millet 3 1
No Yes Zea mays subsp. mays Maize 1 1
No Yes Zea mays v181 Maize 1 1
No Yes Sorghum bicolor Sorghum 2 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 1 1
No Yes Amborella trichopoda 22 1 1
No Yes Volvox carteri f. nagariensis 1 1
No Yes Volvox carteri v199 1 1
No Yes Chlamydomonas reinhardtii 4.0 1 1
No Yes Bathycoccus prasinos 1 1
No Yes Thecamonas trahens ATCC 50062 1 1
No Yes Thalassiosira pseudonana CCMP1335 2 1
No Yes Guillardia theta CCMP2712 v1.0 1 1
No Yes Emiliania huxleyi CCMP1516 12 2
No Yes Thermobaculum terrenum ATCC BAA-798 1 1
No Yes Leptolyngbya sp. PCC 7376 1 1
No Yes Acaryochloris marina MBIC11017 1 1
No Yes Synechocystis sp. PCC 6803 1 1
No Yes Microcoleus sp. PCC 7113 1 1
No Yes Gloeocapsa sp. PCC 7428 1 1
No Yes Rivularia sp. PCC 7116 2 1
No Yes Calothrix sp. PCC 7507 1 1
No Yes Anabaena variabilis ATCC 29413 2 1
No Yes Nostoc sp. PCC 7107 2 1
No Yes Nostoc punctiforme PCC 73102 1 1
No Yes Nostoc sp. PCC 7120 2 2
No Yes Nostoc sp. PCC 7524 2 2
No Yes Cryptobacterium curtum DSM 15641 14 6
No Yes Eggerthella sp. YY7918 14 3
No Yes Eggerthella lenta DSM 2243 8 3
No Yes Slackia heliotrinireducens DSM 20476 12 5
No Yes Olsenella uli DSM 7084 18 7
No Yes Atopobium parvulum DSM 20469 9 4
No Yes Coriobacterium glomerans PW2 3 3
No Yes Ilumatobacter coccineus 1 1
No Yes Nakamurella multipartita DSM 44233 3 3
No Yes Modestobacter marinus 2 2
No Yes Blastococcus saxobsidens DD2 2 2
No Yes Geodermatophilus obscurus DSM 43160 2 2
No Yes Kineococcus radiotolerans SRS30216 4 2
No Yes Catenulispora acidiphila DSM 44928 2 2
No Yes Stackebrandtia nassauensis DSM 44728 1 1
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 2 2
No Yes Thermomonospora curvata DSM 43183 2 2
No Yes Streptosporangium roseum DSM 43021 1 1
No Yes Kitasatospora setae KM-6054 1 1
No Yes Streptomyces coelicolor A3(2) 3 3
No Yes Streptomyces sp. PAMC26508 3 3
No Yes Streptomyces flavogriseus ATCC 33331 3 3
No Yes Streptomyces sp. SirexAA-E 4 4
No Yes Streptomyces griseus subsp. griseus NBRC 13350 3 3
No Yes Streptomyces bingchenggensis BCW-1 3 3
No Yes Streptomyces violaceusniger Tu 4113 2 2
No Yes Streptomyces avermitilis MA-4680 4 4
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488 6 6
No Yes Streptomyces scabiei 87.22 7 7
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008 3 3
No Yes Actinosynnema mirum DSM 43827 10 5
No Yes Pseudonocardia dioxanivorans CB1190 4 4
No Yes Saccharopolyspora erythraea NRRL 2338 2 2
No Yes Amycolatopsis mediterranei U32 1 1
No Yes Kribbella flavida DSM 17836 1 1
No Yes Nocardioides sp. JS614 1 1
No Yes Propionibacterium propionicum F0230a 1 1
No Yes Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 1 1
No Yes Salinispora arenicola CNS-205 1 1
No Yes Verrucosispora maris AB-18-032 1 1
No Yes Actinoplanes sp. SE50/110 1 1
No Yes Actinoplanes missouriensis 431 1 1
No Yes Gordonia polyisoprenivorans VH2 3 2
No Yes Gordonia bronchialis DSM 43247 1 1
No Yes Rhodococcus jostii RHA1 1 1
No Yes Rhodococcus equi 103S 2 1
No Yes Rhodococcus opacus B4 2 2
No Yes Rhodococcus erythropolis PR4 2 2
No Yes Nocardia cyriacigeorgica GUH-2 1 1
No Yes Mycobacterium massiliense str. GO 06 1 1
No Yes Mycobacterium abscessus ATCC 19977 1 1
No Yes Mycobacterium ulcerans Agy99 1 1
No Yes Mycobacterium marinum M 1 1
No Yes Corynebacterium jeikeium K411 6 2
No Yes Sanguibacter keddieii DSM 10542 2 2
No Yes Beutenbergia cavernae DSM 12333 2 2
No Yes Microbacterium testaceum StLB037 2 1
No Yes Clavibacter michiganensis subsp. michiganensis NCPPB 382 3 3
No Yes [Cellvibrio] gilvus ATCC 13127 1 1
No Yes Arthrobacter aurescens TC1 2 2
No Yes Arthrobacter sp. FB24 2 2
No Yes Bifidobacterium longum subsp. longum JDM301 2 2
No Yes Bifidobacterium dentium Bd1 5 5
No Yes Bifidobacterium breve ACS-071-V-Sch8b 2 2
No Yes Bifidobacterium bifidum S17 3 3
No Yes Bifidobacterium adolescentis ATCC 15703 1 1
No Yes Arcanobacterium haemolyticum DSM 20595 3 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270 2 2
No Yes Dehalococcoides sp. BAV1 1 1
No Yes Anaerolinea thermophila UNI-1 1 1
No Yes Herpetosiphon aurantiacus DSM 785 1 1
No Yes Roseiflexus sp. RS-1 2 2
No Yes Roseiflexus castenholzii DSM 13941 1 1
No Yes Chloroflexus sp. MS-G 2 1
No Yes Chloroflexus sp. Y-400-fl 2 1
No Yes Chloroflexus aggregans DSM 9485 1 1
No Yes Chloroflexus aurantiacus J-10-fl 2 1
No Yes Deinococcus maricopensis DSM 21211 1 1
No Yes Deinococcus proteolyticus MRP 1 1
No Yes Deinococcus radiodurans R1 1 1
No Yes Meiothermus ruber DSM 1279 1 1
No Yes Thermus sp. CCB_US3_UF1 1 1
No Yes Anaerococcus prevotii DSM 20548 8 2
No Yes Finegoldia magna ATCC 29328 16 8
No Yes Erysipelothrix rhusiopathiae str. Fujisawa 29 3
No Yes Natranaerobius thermophilus JW/NM-WN-LF 1 1
No Yes Clostridiales genomosp. BVAB3 str. UPII9-5 4 3
No Yes Clostridium clariflavum DSM 19732 1 1
No Yes Eubacterium siraeum 8 3
No Yes Ethanoligenens harbinense YUAN-3 11 1
No Yes Ruminococcus sp. 4 4
No Yes Ruminococcus bromii 4 3
No Yes Ruminococcus albus 7 7 4
No Yes Oscillibacter valericigenes Sjm18-20 14 3
No Yes Desulfosporosinus orientis DSM 765 1 1
No Yes Desulfitobacterium hafniense Y51 4 4
No Yes Desulfitobacterium dehalogenans ATCC 51507 1 1
No Yes Eubacterium eligens ATCC 27750 2 1
No Yes Eubacterium limosum KIST612 22 7
No Yes Clostridium difficile 630 1 1
No Yes Filifactor alocis ATCC 35896 9 4
No Yes Clostridium saccharolyticum WM1 4 3
No Yes Clostridium phytofermentans ISDg 4 1
No Yes [Ruminococcus] obeum 6 4
No Yes [Ruminococcus] torques 3 2
No Yes Eubacterium rectale M104/1 4 2
No Yes Eubacterium rectale ATCC 33656 3 2
No Yes Coprococcus sp. ART55/1 3 1
No Yes Roseburia intestinalis 1 1
No Yes Butyrivibrio proteoclasticus B316 10 5
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen 1 1
No Yes Clostridium novyi NT 1 1
No Yes Clostridium beijerinckii NCIMB 8052 1 1
No Yes Clostridium tetani E88 2 1
No Yes Clostridium perfringens ATCC 13124 4 3
No Yes Clostridium cellulovorans 743B 7 1
No Yes Thermodesulfobium narugense DSM 14796 1 1
No Yes Acetohalobium arabaticum DSM 5501 1 1
No Yes Halanaerobium praevalens DSM 2228 1 1
No Yes Carnobacterium sp. 17-4 1 1
No Yes Aerococcus urinae ACS-120-V-Col10a 3 1
No Yes Melissococcus plutonius DAT561 31 4
No Yes Enterococcus sp. 7L76 9 3
No Yes Enterococcus hirae ATCC 9790 5 5
No Yes Enterococcus faecium Aus0004 11 5
No Yes Enterococcus faecalis 62 13 6
No Yes Weissella koreensis KACC 15510 15 2
No Yes Oenococcus oeni PSU-1 10 2
No Yes Leuconostoc sp. C2 3 2
No Yes Leuconostoc kimchii IMSNU 11154 3 2
No Yes Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 2 1
No Yes Leuconostoc gasicomitatum LMG 18811 2 1
No Yes Lactobacillus casei ATCC 334 9 5
No Yes Lactobacillus rhamnosus Lc 705 9 3
No Yes Lactobacillus salivarius CECT 5713 10 3
No Yes Lactobacillus sakei subsp. sakei 23K 5 2
No Yes Lactobacillus plantarum JDM1 5 2
No Yes Lactobacillus buchneri NRRL B-30929 2 1
No Yes Lactobacillus brevis ATCC 367 3 2
No Yes Pediococcus claussenii ATCC BAA-344 8 2
No Yes Pediococcus pentosaceus ATCC 25745 1 1
No Yes Lactococcus garvieae ATCC 49156 1 1
No Yes Lactococcus lactis subsp. cremoris MG1363 3 2
No Yes Streptococcus sp. I-P16 15 5
No Yes Streptococcus sp. I-G2 14 4
No Yes Streptococcus intermedius JTH08 12 5
No Yes Streptococcus gallolyticus UCN34 15 4
No Yes Streptococcus equi subsp. equi 4047 4 2
No Yes Streptococcus dysgalactiae subsp. equisimilis GGS_124 3 2
No Yes Streptococcus macedonicus ACA-DC 198 2 1
No Yes Streptococcus parasanguinis ATCC 15912 6 2
No Yes Streptococcus pyogenes str. Manfredo 1 1
No Yes Streptococcus agalactiae A909 3 3
No Yes Streptococcus suis P1/7 2 2
No Yes Streptococcus sanguinis SK36 17 6
No Yes Streptococcus oralis Uo5 6 2
No Yes Streptococcus gordonii str. Challis substr. CH1 3 3
No Yes Exiguobacterium sp. AT1b 10 2
No Yes Brevibacillus brevis NBRC 100599 4 1
No Yes Paenibacillus terrae HPL-003 2 2
No Yes Paenibacillus mucilaginosus 3016 1 1
No Yes Paenibacillus polymyxa M1 1 1
No Yes Bacillus selenitireducens MLS10 23 2
No Yes Listeria welshimeri serovar 6b str. SLCC5334 28 6
No Yes Listeria innocua Clip11262 22 6
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954 18 5
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459 18 5
No Yes Listeria ivanovii subsp. ivanovii PAM 55 12 4
No Yes Lysinibacillus sphaericus C3-41 1 1
No Yes Geobacillus thermoleovorans CCB_US3_UF5 1 1
No Yes Bacillus sp. JS 8 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580 8 1
No Yes Bacillus halodurans C-125 12 2
No Yes Bacillus weihenstephanensis KBAB4 50 4
No Yes Bacillus thuringiensis str. Al Hakam 41 5
No Yes Bacillus cereus 03BB102 27 4
No Yes Bacillus anthracis str. A0248 7 2
No Yes Bacillus clausii KSM-K16 4 1
No Yes Bacillus pumilus SAFR-032 10 1
No Yes Macrococcus caseolyticus JCSC5402 3 1
No Yes Gemmatimonas aurantiaca T-27 5 5
No Yes Ignavibacterium album JCM 16511 1 1
No Yes Pelodictyon phaeoclathratiforme BU-1 1 1
No Yes Chlorobium luteolum DSM 273 1 1
No Yes Chlorobium chlorochromatii CaD3 1 1
No Yes Chlorobium phaeovibrioides DSM 265 1 1
No Yes Prosthecochloris aestuarii DSM 271 2 2
No Yes Haliscomenobacter hydrossis DSM 1100 1 1
No Yes Saprospira grandis str. Lewin 2 2
No Yes Niastella koreensis GR20-10 3 3
No Yes Chitinophaga pinensis DSM 2588 3 3
No Yes Marivirga tractuosa DSM 4126 5 5
No Yes Fibrella aestuarina 2 2
No Yes Leadbetterella byssophila DSM 17132 3 3
No Yes Dyadobacter fermentans DSM 18053 4 4
No Yes Cytophaga hutchinsonii ATCC 33406 4 4
No Yes Spirosoma linguale DSM 74 4 4
No Yes Runella slithyformis DSM 19594 2 2
No Yes Paludibacter propionicigenes WB4 1 1
No Yes Bacteroides sp. CF50 1 1
No Yes Prevotella melaninogenica ATCC 25845 1 1
No Yes Prevotella intermedia 17 1 1
No Yes Prevotella denticola F0289 1 1
No Yes Bacteroides fragilis YCH46 1 1
No Yes Pedobacter saltans DSM 12145 3 3
No Yes Solitalea canadensis DSM 3403 2 2
No Yes Pedobacter heparinus DSM 2366 4 4
No Yes Sphingobacterium sp. 21 2 2
No Yes Fluviicola taffensis DSM 16823 6 6
No Yes Owenweeksia hongkongensis DSM 17368 1 1
No Yes Zunongwangia profunda SM-A87 1 1
No Yes Krokinobacter sp. 4H-3-7-5 1 1
No Yes Gramella forsetii KT0803 1 1
No Yes Lacinutrix sp. 5H-3-7-4 1 1
No Yes Maribacter sp. HTCC2170 2 2
No Yes Robiginitalea biformata HTCC2501 1 1
No Yes Croceibacter atlanticus HTCC2559 2 2
No Yes Zobellia galactanivorans 4 4
No Yes Muricauda ruestringensis DSM 13258 2 2
No Yes Cellulophaga algicola DSM 14237 3 3
No Yes Cellulophaga lytica DSM 7489 2 2
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868 1 1
No Yes Capnocytophaga canimorsus Cc5 1 1
No Yes Capnocytophaga ochracea DSM 7271 1 1
No Yes Flavobacterium indicum GPTSA100-9 2 2
No Yes Flavobacterium branchiophilum FL-15 2 2
No Yes Flavobacterium columnare ATCC 49512 3 3
No Yes Flavobacterium johnsoniae UW101 7 7
No Yes Fibrobacter succinogenes subsp. succinogenes S85 1 1
No Yes Isosphaera pallida ATCC 43644 2 2
No Yes Planctomyces brasiliensis DSM 5305 2 2
No Yes Planctomyces limnophilus DSM 3776 3 3
No Yes Rhodopirellula baltica SH 1 2 2
No Yes Pirellula staleyi DSM 6068 3 3
No Yes Aminobacterium colombiense DSM 12261 1 1
No Yes Turneriella parva DSM 21527 1 1
No Yes Treponema azotonutricium ZAS-9 4 2
No Yes Treponema succinifaciens DSM 2489 2 2
No Yes Spirochaeta africana DSM 8902 1 1
No Yes Desulfurispirillum indicum S5 1 1
No Yes Marinitoga piezophila KA3 2 2
No Yes Fervidobacterium pennivorans DSM 9078 1 1
No Yes Fervidobacterium nodosum Rt17-B1 1 1
No Yes Thermosipho melanesiensis BI429 1 1
No Yes Thermovibrio ammonificans HB-1 1 1
No Yes Desulfurobacterium thermolithotrophum DSM 11699 1 1
No Yes Elusimicrobium minutum Pei191 1 1
No Yes Candidatus Chloracidobacterium thermophilum B 2 2
No Yes Candidatus Solibacter usitatus Ellin6076 7 6
No Yes Granulicella tundricola MP5ACTX9 5 4
No Yes Granulicella mallensis MP5ACTX8 5 5
No Yes Candidatus Koribacter versatilis Ellin345 2 2
No Yes Terriglobus saanensis SP1PR4 1 1
No Yes Terriglobus roseus DSM 18391 5 5
No Yes Acidobacterium capsulatum ATCC 51196 2 2
No Yes Thermodesulfovibrio yellowstonii DSM 11347 1 1
No Yes Candidatus Nitrospira defluvii 1 1
No Yes Leptospirillum ferrooxidans C2-3 2 1
No Yes Bacteriovorax marinus SJ 1 1
No Yes Arcobacter nitrofigilis DSM 7299 1 1
No Yes Desulfarculus baarsii DSM 2075 1 1
No Yes Desulfobacca acetoxidans DSM 11109 1 1
No Yes Syntrophobacter fumaroxidans MPOB 1 1
No Yes Desulfotalea psychrophila LSv54 2 2
No Yes Desulfobulbus propionicus DSM 2032 3 3
No Yes Desulfatibacillum alkenivorans AK-01 1 1
No Yes Geobacter uraniireducens Rf4 1 1
No Yes Haliangium ochraceum DSM 14365 1 1
No Yes Sorangium cellulosum 'So ce 56' 3 3
No Yes Anaeromyxobacter dehalogenans 2CP-1 1 1
No Yes Myxococcus xanthus DK 1622 3 3
No Yes Myxococcus fulvus HW-1 1 1
No Yes Azoarcus sp. BH72 1 1
No Yes Thiomonas intermedia K12 1 1
No Yes Burkholderia phymatum STM815 1 1
No Yes Burkholderia xenovorans LB400 1 1
No Yes Cupriavidus necator N-1 1 1
No Yes Ralstonia eutropha H16 1 1
No Yes Ramlibacter tataouinensis TTB310 1 1
No Yes Rhodoferax ferrireducens T118 1 1
No Yes Acidovorax ebreus TPSY 2 2
No Yes Acidovorax sp. JS42 2 2
No Yes Acidovorax citrulli AAC00-1 1 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860 1 1
No Yes Bordetella avium 197N 1 1
No Yes Achromobacter xylosoxidans A8 1 1
No Yes Achromobacter xylosoxidans 1 1
No Yes Parvularcula bermudensis HTCC2503 1 1
No Yes Erythrobacter litoralis HTCC2594 1 1
No Yes Sphingopyxis alaskensis RB2256 1 1
No Yes Sphingobium chlorophenolicum L-1 1 1
No Yes Micavibrio aeruginosavorus ARL-13 1 1
No Yes Sinorhizobium meliloti AK83 1 1
No Yes Mesorhizobium sp. BNC1 2 2
No Yes Bradyrhizobium japonicum USDA 110 1 1
No Yes Gallibacterium anatis UMN179 1 1
No Yes Ferrimonas balearica DSM 9799 1 1
No Yes Shewanella halifaxensis HAW-EB4 1 1
No Yes Shewanella sediminis HAW-EB3 1 1
No Yes Shewanella baltica OS185 1 1
No Yes Pseudoalteromonas sp. SM9913 2 2
No Yes Glaciecola nitratireducens FR1064 1 1
No Yes Alteromonas sp. SN2 1 1
No Yes Kangiella koreensis DSM 16069 1 1
No Yes Xanthomonas axonopodis pv. citri str. 306 1 1
No Yes Xanthomonas oryzae pv. oryzae PXO99A 1 1
No Yes Xanthomonas campestris pv. campestris str. B100 1 1
No Yes Yersinia pseudotuberculosis IP 31758 1 1
No Yes Yersinia pestis Pestoides F 1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1 1 1
No Yes Candidatus Caldiarchaeum subterraneum 2 2
No Yes Pyrolobus fumarii 1A 1 1
No Yes Ignisphaera aggregans DSM 17230 1 1
No Yes Acidianus hospitalis W1 2 2
No Yes Sulfolobus tokodaii str. 7 1 1
No Yes Sulfolobus acidocaldarius DSM 639 1 1
No Yes Thermofilum sp. 1910b 1 1
No Yes Thermofilum pendens Hrk 5 1 1
No Yes halophilic archaeon DL31 2 2
No Yes Methanocella arvoryzae MRE50 5 5
No Yes Methanocella paludicola SANAE 3 3
No Yes Methanosaeta harundinacea 6Ac 12 2
No Yes Methanosaeta concilii GP6 1 1
No Yes Methanohalobium evestigatum Z-7303 1 1
No Yes Methanohalophilus mahii DSM 5219 3 2
No Yes Methanocorpusculum labreanum Z 1 1
No Yes Archaeoglobus profundus DSM 5631 1 1
No Yes Thermococcus gammatolerans EJ3 1 1
No Yes Thermoplasmatales archaeon BRNA1 1 1
No Yes Thermoplasma volcanium GSS1 1 1
No Yes Natrialba magadii ATCC 43099 4 4
No Yes Halorubrum lacusprofundi ATCC 49239 1 1
No Yes Haloquadratum walsbyi DSM 16790 1 1
No Yes Haloferax mediterranei ATCC 33500 1 1
No Yes Halomicrobium mukohataei DSM 12286 1 1
No Yes Haloarcula hispanica ATCC 33960 1 1
No Yes Halalkalicoccus jeotgali B3 1 1
No Yes Methanothermobacter marburgensis str. Marburg 1 1
No Yes Methanosphaera stadtmanae DSM 3091 1 1
No Yes Methanobrevibacter sp. AbM4 1 1
No Yes Methanobrevibacter ruminantium M1 11 1
No Yes Methanobrevibacter smithii ATCC 35061 2 2
No Yes Aciduliprofundum sp. MAR08-339 1 1
No Yes Aciduliprofundum boonei T469 1 1
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 1 1
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 2 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 2 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 3 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P 1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N 1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I 1 1
No Yes Synechocystis sp. PCC 6803 1 1
No Yes Prochlorococcus marinus str. MIT 9301 1 1
No Yes Prochlorococcus marinus str. MIT 9215 1 1
No Yes Cyanothece sp. PCC 7822 1 1
No Yes Cyanothece sp. PCC 7424 1 1
No Yes Cyanobacterium aponinum PCC 10605 1 1
No Yes Cyanobacterium stanieri PCC 7202 1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303 1 1
No Yes Cylindrospermum stagnale PCC 7417 2 1
No Yes Gordonibacter pamelaeae 7-10-1-b 4 4
No Yes Nocardiopsis alba ATCC BAA-2165 2 2
No Yes Streptomyces albus J1074 2 2
No Yes Streptomyces rapamycinicus NRRL 5491 5 4
No Yes Streptomyces davawensis JCM 4913 6 6
No Yes Streptomyces fulvissimus DSM 40593 5 5
No Yes Streptomyces venezuelae ATCC 10712 3 3
No Yes Streptomyces collinus Tu 365 4 4
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488 7 7
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01 3 3
No Yes Saccharothrix espanaensis DSM 44229 3 3
No Yes Amycolatopsis mediterranei RB 1 1
No Yes Amycolatopsis mediterranei S699 1 1
No Yes Amycolatopsis mediterranei S699 1 1
No Yes Amycolatopsis orientalis HCCB10007 2 2
No Yes Propionibacterium acidipropionici ATCC 4875 1 1
No Yes Actinoplanes friuliensis DSM 7358 1 1
No Yes Rhodococcus erythropolis CCM2595 2 2
No Yes Nocardia brasiliensis ATCC 700358 1 1
No Yes Mycobacterium abscessus subsp. bolletii 50594 1 1
No Yes Mycobacterium liflandii 128FXT 1 1
No Yes Corynebacterium diphtheriae VA01 1 1
No Yes Clavibacter michiganensis subsp. sepedonicus 2 2
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 1 1
No Yes Bifidobacterium longum NCC2705 2 2
No Yes Bifidobacterium longum DJO10A 2 2
No Yes Bifidobacterium longum subsp. infantis 157F 2 2
No Yes Bifidobacterium longum subsp. longum KACC 91563 1 1
No Yes Bifidobacterium longum subsp. longum BBMN68 2 2
No Yes Bifidobacterium longum subsp. longum F8 1 1
No Yes Bifidobacterium longum subsp. longum JCM 1217 2 2
No Yes Bifidobacterium thermophilum RBL67 2 2
No Yes Bifidobacterium animalis subsp. animalis ATCC 25527 2 2
No Yes Bifidobacterium breve UCC2003 3 3
No Yes Bifidobacterium bifidum PRL2010 2 2
No Yes Bifidobacterium bifidum BGN4 3 3
No Yes Dehalococcoides mccartyi GY50 1 1
No Yes Chthonomonas calidirosea T49 3 3
No Yes Thermus thermophilus JL-18 1 1
No Yes Thermus thermophilus HB8 1 1
No Yes [Eubacterium] cylindroides [Eubacterium] cylindroides T2-87 8 4
No Yes Erysipelothrix rhusiopathiae SY1027 24 4
No Yes Eubacterium siraeum V10Sc8a 3 1
No Yes Ruminococcus champanellensis 18P13 5 4
No Yes Clostridium acidurici 9a 5 1
No Yes Desulfitobacterium hafniense DCB-2 6 4
No Yes Clostridium difficile BI1 1 1
No Yes Clostridium difficile R20291 1 1
No Yes Clostridium difficile CD196 1 1
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10 2 1
No Yes Coprococcus catus GD/7 11 5
No Yes Roseburia intestinalis XB6B4 1 1
No Yes Clostridium sp. SY8519 23 7
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT) 1 1
No Yes Clostridium tetani genome 12124569 2 1
No Yes Clostridium perfringens SM101 1 1
No Yes Clostridium perfringens str. 13 6 2
No Yes Clostridium botulinum H04402 065 1 1
No Yes Clostridium botulinum BKT015925 3 2
No Yes Clostridium botulinum E3 str. Alaska E43 1 1
No Yes Thermacetogenium phaeum DSM 12270 1 1
No Yes Carnobacterium maltaromaticum LMA28 27 8
No Yes Melissococcus plutonius ATCC 35311 9 3
No Yes Enterococcus mundtii QU 25 4 3
No Yes Enterococcus casseliflavus EC20 8 5
No Yes Enterococcus faecium Aus0085 14 10
No Yes Enterococcus faecium NRRL B-2354 5 2
No Yes Enterococcus faecium DO 11 6
No Yes Enterococcus faecalis str. Symbioflor 1 10 4
No Yes Enterococcus faecalis D32 16 9
No Yes Enterococcus faecalis OG1RF 22 6
No Yes Enterococcus faecalis V583 10 5
No Yes Leuconostoc carnosum JB16 2 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides J18 2 1
No Yes Leuconostoc gelidum JB7 2 1
No Yes Lactobacillus paracasei subsp. paracasei 8700:2 9 5
No Yes Lactobacillus casei LOCK919 13 7
No Yes Lactobacillus casei W56 12 5
No Yes Lactobacillus casei LC2W 11 4
No Yes Lactobacillus casei BD-II 11 4
No Yes Lactobacillus casei BL23 7 4
No Yes Lactobacillus casei str. Zhang 11 5
No Yes Lactobacillus rhamnosus LOCK908 7 2
No Yes Lactobacillus rhamnosus LOCK900 6 2
No Yes Lactobacillus rhamnosus ATCC 8530 3 2
No Yes Lactobacillus rhamnosus GG 3 2
No Yes Lactobacillus rhamnosus GG 3 2
No Yes Lactobacillus plantarum 16 5 2
No Yes Lactobacillus plantarum ZJ316 5 2
No Yes Lactobacillus plantarum subsp. plantarum ST-III 5 2
No Yes Lactobacillus plantarum subsp. plantarum P-8 4 2
No Yes Lactobacillus plantarum WCFS1 5 2
No Yes Lactobacillus brevis KB290 3 2
No Yes Pediococcus pentosaceus SL4 1 1
No Yes Lactococcus garvieae Lg2 1 1
No Yes Lactococcus lactis subsp. lactis KLDS 4.0325 12 4
No Yes Lactococcus lactis subsp. lactis IO-1 10 3
No Yes Lactococcus lactis subsp. lactis CV56 12 4
No Yes Lactococcus lactis subsp. lactis KF147 2 1
No Yes Lactococcus lactis subsp. lactis Il1403 10 3
No Yes Lactococcus lactis subsp. cremoris KW2 10 2
No Yes Lactococcus lactis subsp. cremoris UC509.9 4 1
No Yes Lactococcus lactis subsp. cremoris A76 6 1
No Yes Lactococcus lactis subsp. cremoris NZ9000 2 1
No Yes Lactococcus lactis subsp. cremoris SK11 6 1
No Yes Streptococcus constellatus subsp. pharyngis C1050 3 3
No Yes Streptococcus constellatus subsp. pharyngis C818 3 3
No Yes Streptococcus constellatus subsp. pharyngis C232 3 3
No Yes Streptococcus intermedius B196 13 6
No Yes Streptococcus intermedius C270 6 4
No Yes Streptococcus anginosus C238 2 1
No Yes Streptococcus anginosus C1051 9 2
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069 18 4
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC 43143 18 4
No Yes Streptococcus equi subsp. zooepidemicus ATCC 35246 6 4
No Yes Streptococcus equi subsp. zooepidemicus MGCS10565 7 5
No Yes Streptococcus equi subsp. zooepidemicus 7 4
No Yes Streptococcus dysgalactiae subsp. equisimilis 167 5 3
No Yes Streptococcus dysgalactiae subsp. equisimilis AC-2713 4 3
No Yes Streptococcus dysgalactiae subsp. equisimilis ATCC 12394 3 2
No Yes Streptococcus dysgalactiae subsp. equisimilis RE378 4 3
No Yes Streptococcus parasanguinis FW213 6 2
No Yes Streptococcus pyogenes HSC5 1 1
No Yes Streptococcus pyogenes MGAS1882 4 1
No Yes Streptococcus pyogenes MGAS15252 4 1
No Yes Streptococcus pyogenes Alab49 1 1
No Yes Streptococcus pyogenes MGAS10750 3 2
No Yes Streptococcus pyogenes MGAS10270 5 3
No Yes Streptococcus pyogenes MGAS2096 6 2
No Yes Streptococcus pyogenes MGAS9429 4 1
No Yes Streptococcus pyogenes MGAS6180 4 1
No Yes Streptococcus pyogenes NZ131 4 1
No Yes Streptococcus pyogenes MGAS8232 1 1
No Yes Streptococcus pyogenes MGAS10394 2 2
No Yes Streptococcus pyogenes MGAS315 1 1
No Yes Streptococcus pyogenes SSI-1 1 1
No Yes Streptococcus pneumoniae A026 4 2
No Yes Streptococcus pneumoniae ST556 4 2
No Yes Streptococcus pneumoniae INV200 1 1
No Yes Streptococcus pneumoniae TCH8431/19A 4 2
No Yes Streptococcus pneumoniae CGSP14 1 1
No Yes Streptococcus pneumoniae JJA 1 1
No Yes Streptococcus pneumoniae Hungary19A-6 5 3
No Yes Streptococcus pneumoniae Taiwan19F-14 4 2
No Yes Streptococcus pneumoniae 670-6B 5 3
No Yes Streptococcus pneumoniae TIGR4 4 2
No Yes Streptococcus agalactiae 09mas018883 5 5
No Yes Streptococcus agalactiae GD201008-001 1 1
No Yes Streptococcus agalactiae NEM316 4 4
No Yes Streptococcus agalactiae 2603V/R 4 4
No Yes Streptococcus mutans LJ23 1 1
No Yes Streptococcus suis T15 3 2
No Yes Streptococcus suis SC070731 2 2
No Yes Streptococcus suis S735 3 3
No Yes Streptococcus suis ST3 2 2
No Yes Streptococcus suis ST1 1 1
No Yes Streptococcus suis A7 3 3
No Yes Streptococcus suis JS14 3 3
No Yes Streptococcus suis BM407 3 3
No Yes Streptococcus suis SC84 3 3
No Yes Streptococcus suis GZ1 5 4
No Yes Streptococcus suis 98HAH33 2 2
No Yes Streptococcus suis 05ZYH33 3 3
No Yes Paenibacillus mucilaginosus K02 1 1
No Yes Paenibacillus polymyxa CR1 1 1
No Yes Paenibacillus polymyxa SC2 1 1
No Yes Listeria monocytogenes EGD sequence 22 6
No Yes Listeria monocytogenes N53-1 22 6
No Yes Listeria monocytogenes La111 22 6
No Yes Listeria monocytogenes serotype 4b str. LL195 21 6
No Yes Listeria monocytogenes 07PF0776 21 7
No Yes Listeria monocytogenes M7 23 7
No Yes Listeria monocytogenes J1-220 22 7
No Yes Listeria monocytogenes J1816 20 6
No Yes Listeria monocytogenes SLCC2376 28 7
No Yes Listeria monocytogenes SLCC5850 22 6
No Yes Listeria monocytogenes ATCC 19117 22 7
No Yes Listeria monocytogenes L312 20 6
No Yes Listeria monocytogenes SLCC2479 23 6
No Yes Listeria monocytogenes SLCC7179 21 6
No Yes Listeria monocytogenes SLCC2540 21 7
No Yes Listeria monocytogenes SLCC2378 22 7
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755 19 6
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372 23 6
No Yes Listeria monocytogenes serotype 7 str. SLCC2482 21 7
No Yes Listeria monocytogenes 08-5578 24 6
No Yes Listeria monocytogenes 08-5923 23 6
No Yes Listeria monocytogenes L99 23 7
No Yes Listeria monocytogenes HCC23 23 7
No Yes Listeria monocytogenes 10403S 22 6
No Yes Listeria monocytogenes J0161 24 7
No Yes Listeria monocytogenes Finland 1998 23 6
No Yes Listeria monocytogenes FSL R2-561 23 6
No Yes Listeria monocytogenes serotype 4b str. F2365 21 6
No Yes Listeria monocytogenes EGD-e 25 7
No Yes Amphibacillus xylanus NBRC 15112 19 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing 8 1
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3 8 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2 7 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946 8 1
No Yes Bacillus amyloliquefaciens LFB112 8 1
No Yes Bacillus amyloliquefaciens IT-45 8 1
No Yes Bacillus amyloliquefaciens XH7 9 1
No Yes Bacillus amyloliquefaciens LL3 8 1
No Yes Bacillus amyloliquefaciens TA208 8 1
No Yes Bacillus amyloliquefaciens DSM 7 8 1
No Yes Bacillus licheniformis 9945A 8 1
No Yes Bacillus subtilis XF-1 8 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1 8 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1 8 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1 8 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10 8 1
No Yes Bacillus subtilis subsp. spizizenii str. W23 8 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580 8 1
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98 6 2
No Yes Bacillus toyonensis BCT-7112 31 4
No Yes Bacillus thuringiensis HD-771 40 5
No Yes Bacillus thuringiensis HD-789 74 9
No Yes Bacillus thuringiensis MC28 78 8
No Yes Bacillus thuringiensis serovar chinensis CT-43 54 6
No Yes Bacillus thuringiensis YBT-1518 69 11
No Yes Bacillus thuringiensis Bt407 54 7
No Yes Bacillus thuringiensis serovar konkukian str. 97-27 26 2
No Yes Bacillus thuringiensis serovar kurstaki str. HD73 50 8
No Yes Bacillus thuringiensis BMB171 41 7
No Yes Bacillus thuringiensis serovar finitimus YBT-020 25 2
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056 60 7
No Yes Bacillus cereus FRI-35 43 9
No Yes Bacillus cereus biovar anthracis str. CI 27 2
No Yes Bacillus cereus AH820 33 3
No Yes Bacillus cereus AH187 37 8
No Yes Bacillus cereus B4264 58 6
No Yes Bacillus cereus G9842 54 6
No Yes Bacillus cereus Q1 31 6
No Yes Bacillus cereus F837/76 27 4
No Yes Bacillus cereus NC7401 32 7
No Yes Bacillus cereus E33L 29 3
No Yes Bacillus cereus ATCC 14579 59 6
No Yes Bacillus cereus ATCC 10987 40 6
No Yes Bacillus anthracis str. H9401 21 4
No Yes Bacillus anthracis str. CDC 684 21 4
No Yes Bacillus anthracis str. 'Ames Ancestor' 7 2
No Yes Bacillus anthracis str. Sterne 7 2
No Yes Bacillus anthracis str. Ames 7 2
No Yes Staphylococcus aureus CA-347 6 1
No Yes Staphylococcus aureus Bmb9393 4 1
No Yes Staphylococcus aureus 08BA02176 6 1
No Yes Staphylococcus aureus subsp. aureus Z172 4 1
No Yes Staphylococcus aureus subsp. aureus 6850 6 1
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412 6 1
No Yes Staphylococcus aureus subsp. aureus T0131 4 1
No Yes Staphylococcus aureus subsp. aureus LGA251 5 1
No Yes Staphylococcus aureus subsp. aureus TW20 4 1
No Yes Staphylococcus aureus subsp. aureus 55/2053 8 1
No Yes Staphylococcus aureus subsp. aureus TCH60 6 1
No Yes Staphylococcus aureus subsp. aureus str. JKD6008 4 1
No Yes Staphylococcus aureus subsp. aureus S0385 8 1
No Yes Staphylococcus aureus subsp. aureus MSSA476 8 1
No Yes Staphylococcus aureus subsp. aureus MRSA252 8 1
No Yes Staphylococcus aureus subsp. aureus MW2 8 1
No Yes Chlorobium phaeobacteroides BS1 1 1
No Yes Salinibacter ruber DSM 13855 1 1
No Yes Echinicola vietnamensis DSM 17526 2 2
No Yes Emticicia oligotrophica DSM 17448 3 3
No Yes Prevotella sp. oral taxon 299 str. F0039 1 1
No Yes Prevotella dentalis DSM 3688 2 2
No Yes Alistipes shahii WAL 8301 1 1
No Yes Bacteroides fragilis 638R 1 1
No Yes Nonlabens dokdonensis DSW-6 1 1
No Yes Riemerella anatipestifer RA-CH-2 1 1
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868 1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85 1 1
No Yes Singulisphaera acidiphila DSM 18658 4 4
No Yes Leptospirillum ferriphilum ML-04 2 1
No Yes Bdellovibrio bacteriovorus str. Tiberius 1 1
No Yes Geobacter sp. M18 1 1
No Yes Sorangium cellulosum So0157-2 1 1
No Yes Anaeromyxobacter sp. K 2 2
No Yes Anaeromyxobacter dehalogenans 2CP-C 1 1
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 1 1
No Yes Micavibrio aeruginosavorus EPB 1 1
No Yes Sinorhizobium fredii HH103 1 1
No Yes Sinorhizobium meliloti 2011 1 1
No Yes Sinorhizobium meliloti GR4 1 1
No Yes Sinorhizobium meliloti Rm41 1 1
No Yes Sinorhizobium meliloti SM11 1 1
No Yes Sinorhizobium meliloti BL225C 1 1
No Yes Sinorhizobium meliloti 1021 1 1
No Yes Rhodopseudomonas palustris HaA2 1 1
No Yes Bradyrhizobium japonicum USDA 6 1 1
No Yes Shewanella baltica OS678 1 1
No Yes Shewanella baltica OS117 1 1
No Yes Shewanella baltica OS195 1 1
No Yes Shewanella baltica OS155 1 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b' 1 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM7' 1 1
No Yes Alteromonas macleodii AltDE1 1 1
No Yes Xanthomonas citri subsp. citri Aw12879 1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10 1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1 1 1
No Yes Xanthomonas axonopodis Xac29-1 1 1
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018 1 1
No Yes Xanthomonas oryzae pv. oryzae KACC 10331 1 1
No Yes Xanthomonas campestris pv. raphani 756C 1 1
No Yes Xanthomonas campestris pv. campestris str. 8004 1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913 1 1
No Yes Spiribacter salinus M19-40 1 1
No Yes Yersinia pseudotuberculosis PB1/+ 1 1
No Yes Yersinia pseudotuberculosis YPIII 1 1
No Yes Yersinia pseudotuberculosis IP 32953 1 1
No Yes Yersinia pestis biovar Microtus str. 91001 1 1
No Yes Yersinia pestis D182038 1 1
No Yes Yersinia pestis D106004 1 1
No Yes Yersinia pestis Antiqua 1 1
No Yes Yersinia pestis Angola 1 1
No Yes Yersinia pestis CO92 1 1
No Yes Yersinia pestis KIM10+ 1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21 1 1
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432 1 1
No Yes Pseudomonas putida NBRC 14164 1 1
No Yes Pseudomonas putida GB-1 1 1
No Yes Candidatus Nitrososphaera gargensis Ga9.2 1 1
No Yes Sulfolobus acidocaldarius SUSAZ 1 1
No Yes Sulfolobus acidocaldarius Ron12/I 1 1
No Yes Sulfolobus acidocaldarius N8 1 1
No Yes Methanomethylovorans hollandica DSM 15978 3 2
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 2 2
No Yes Natrinema pellirubrum DSM 15624 2 1
No Yes Haloquadratum walsbyi C23 1 1
No Yes Halorhabdus tiamatea SARL4B 1 1
No Yes Haloarcula hispanica N601 1 1
No Yes Methanococcus maripaludis C6 6 1
No Yes Lotus japonicus (Early assembly) 1 1
No Yes Malus x domestica (Duplicate) Apple 4 3
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft) 4 2
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 2 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 2 1
No Yes Phoenix dactylifera (Early draft) Date palm 2 2
No Yes Pongo abelii 69_2 Sumatran orangutan 1 1
No Yes Macaca mulatta 69_1 Rhesus monkey 1 1
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 1 1
No Yes Bos taurus 69_3.1 Cattle 1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 1 1
No Yes Ailuropoda melanoleuca 69_1 Giant panda 1 1
No Yes Pteropus vampyrus 69_1 Large flying fox 1 1
No Yes Petromyzon marinus 69_7.0 Sea lamprey 1 1
No Yes Latimeria chalumnae 69_1 Coelacanth 1 1
No Yes Ciona intestinalis 69 Vase tunicate 1 1
No Yes Drosophila melanogaster 69_5 Fruit fly 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 1_050719N (meta-genome) 3 3
No Yes 2_050719S (meta-genome) 10 9
No Yes 3_050719R (meta-genome) 8 6
No Yes 3_Below_base_of_euphotic (meta-genome) 1 1
No Yes 4_050719Q (meta-genome) 11 11
No Yes 5_050719P (meta-genome) 17 17
No Yes 5_Below_upper_mesopelagic (meta-genome) 1 1
No Yes 7_Oxygen_minimum_layer (meta-genome) 3 3
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome) 3 2
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome) 2 2
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome) 4 4
No Yes Bath Hot Springs, planktonic community (meta-genome) 1 1
No Yes Combined (meta-genome) 20 20
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome) 17 13
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome) 1 1
No Yes Dump bottom (Dump bottom) (meta-genome) 37 36
No Yes Dump top (Dump top) (meta-genome) 43 42
No Yes Endophytic microbiome from Rice (meta-genome) 3 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome) 4 4
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome) 8 8
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome) 4 3
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome) 7 7
No Yes Fungus garden combined (combined) (meta-genome) 17 15
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome) 26 23
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome) 39 35
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes 3 3
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome) 2 2
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome) 4 3
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome) 6 4
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome) 1 1
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome) 1 1
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome) 3 3
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome) 1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome) 2 2
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome) 8 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome) 3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome) 3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome) 16 16
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome) 1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome) 2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome) 3 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome) 18 18
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome) 8 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome) 12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome) 16 16
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome) 6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome) 2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) 14 14
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome) 9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome) 1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome) 10 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) 7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome) 8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome) 3 3
No Yes Human Gut Community Subject 7 (meta-genome) 54 30
No Yes Human Gut Community Subject 8 (meta-genome) 66 40
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome) 125 91
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome) 14 14
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome) 11 11
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome) 3 3
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 41 37
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) 22 19
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome) 2 2
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome) 6 6
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome) 7 6
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome) 5 5
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome) 22 22
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome) 10 10
No Yes Mouse Gut Community ob1 (meta-genome) 2 1
No Yes Mouse Gut Community ob2 (meta-genome) 4 3
No Yes NCBI 2017_08 genome 141202 57459
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome) 29 28
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome) 2 2
No Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome) 1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome) 7 6
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome) 8 8
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome) 8 7
No Yes Sludge/Australian, Phrap Assembly (meta-genome) 1 1
No Yes Sludge/US, Jazz Assembly (meta-genome) 1 1
No Yes Sludge/US, Phrap Assembly (meta-genome) 2 2
No Yes Soil microbial communities from Minnesota Farm (meta-genome) 38 37
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 43 43
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) 45 45
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) 24 24
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome) 26 26
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome) 34 34
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome) 48 48
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome) 6 5
No Yes STRING v9.0.5 (STRING) 1365 542
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome) 9 9
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) 26 26
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome) 8 8
No Yes Termite Protist Endosymbiont Community (meta-genome) 1 1
No Yes Uniprot 2018_03 genome 47876 20117
No Yes Uranium Contaminated Groundwater FW106 (meta-genome) 1 1
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome) 26 23
No Yes Global Ocean Sampling Expedition (GOS) 283 273
No Yes NCBI plasmid sequences (Plasmids) 228 79
No Yes PDB chains (SCOP 1.75 ) (PDB) 7 3
No Yes Protein Data Bank (all PDB sequenc) 161 127
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ) 210 210
No Yes TargetDB (Targets) 74 26