SUPERFAMILY 1.75 HMM library and genome assignments server

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Cna protein B-type domain superfamily domain assignments
in
Pseudoalteromonas atlantica T6c


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Select to display   Genome       Domains   Proteins
No Yes ALL   199238 199238
No Yes Pongo abelii 76_2 Sumatran orangutan 1 1
No Yes Macaca mulatta 76_1 Rhesus monkey 1 1
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 2 2
No Yes Bos taurus 76_3.1 Cattle 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 1 1
No Yes Ailuropoda melanoleuca 76_1 Giant panda 1 1
No Yes Pteropus vampyrus 76_1 Large flying fox 1 1
No Yes Saccoglossus kowalevskii v3.0   2 2
No Yes Petromyzon marinus 76_7.0 Sea lamprey 1 1
No Yes Latimeria chalumnae 76_1 Coelacanth 1 1
No Yes Oikopleura dioica   1 1
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 2 2
No Yes Ciona intestinalis 76 Vase tunicate 1 1
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Adineta vaga   4 3
No Yes Octopus bimaculoides 280   1 1
No Yes Crassostrea gigas 22 Pacific oyster 1 1
No Yes Lottia gigantea Owl limpet 1 1
No Yes Helobdella robusta   1 1
No Yes Capitella sp. I   1 1
No Yes Danaus plexippus OGS1.0 Monarch butterfly 1 1
No Yes Heliconius melpomene Postman butterfly 2 1
No Yes Bombyx mori Domestic silkworm 1 1
No Yes Nasonia vitripennis Jewel wasp 2 1
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 3 3
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 1 1
No Yes Pogonomyrmex barbatus v1.2 Red harvester ant 3 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 1 1
No Yes Atta cephalotes v1.1   2 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 4 1
No Yes Lucilia cuprina Australian sheep blowfly 3 1
No Yes Drosophila willistoni 1.3   1 1
No Yes Drosophila yakuba 1.3   1 1
No Yes Drosophila simulans 1.3   1 1
No Yes Drosophila sechellia 1.3   1 1
No Yes Drosophila melanogaster 76_5 Fruit fly 1 1
No Yes Drosophila erecta 1.3   1 1
No Yes Drosophila ananassae 1.3   1 1
No Yes Drosophila mojavensis 1.3   1 1
No Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 3 1
No Yes Culex pipiens quinquefasciatus Southern house mosquito 3 1
No Yes Anopheles darlingi 22 American malaria mosquito 2 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 2 1
No Yes Tribolium castaneum 3.0 Red flour beetle 1 1
No Yes Pediculus humanus corporis (Early assembly) Human body louse 3 1
No Yes Rhodnius prolixus 22   1 1
No Yes Daphnia pulex Common water flea 1 1
No Yes Sarcoptes scabiei   2 1
No Yes Pristionchus pacificus   1 1
No Yes Meloidogyne hapla   1 1
No Yes Caenorhabditis remanei   1 1
No Yes Trichinella spiralis 22   2 1
No Yes Schistosoma mansoni   1 1
No Yes Mnemiopsis leidyi Sea walnut 1 1
No Yes Hydra vulgaris   1 1
No Yes Trichoplax adhaerens   1 1
No Yes Monosiga brevicollis   2 2
No Yes Sphaeroforma arctica JP610   63 20
No Yes Dictyostelium discoideum   3 2
No Yes Dictyostelium purpureum   1 1
No Yes Selaginella moellendorffii   8 3
No Yes Eucalyptus grandis v201 Rose gum 2 1
No Yes Theobroma cacao B97-61/B2 v1 Cacao 2 1
No Yes Gossypium raimondii v221   6 3
No Yes Citrus clementina v165   2 1
No Yes Citrus sinensis v154 Sweet orange 9 5
No Yes Thellungiella halophila v173   2 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 2 1
No Yes Capsella rubella v183   2 1
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes Carica papaya Papaya 2 1
No Yes Medicago truncatula Barrel medic 2 1
No Yes Phaseolus vulgaris v186 French bean 2 1
No Yes Glycine max v109 Soybean 7 4
No Yes Cucumis sativus v122 Cucumber 4 3
No Yes Fragaria vesca Wild strawberry 3 1
No Yes Malus domestica v196 Apple 4 3
No Yes Prunus persica v139 Peach 2 1
No Yes Populus trichocarpa v156 Black cottonwood 4 4
No Yes Vitis vinifera Wine grape 1 1
No Yes Mimulus guttatus v140 Spotted monkey flower 2 1
No Yes Solanum lycopersicum v.2.3 Tomato 2 1
No Yes Actinidia chinensis Hongyang   2 1
No Yes Aquilegia coerulea v195   7 7
No Yes Triticum urartu 22   1 1
No Yes Triticum aestivum 22 Bread wheat 3 3
No Yes Aegilops tauschii 22   1 1
No Yes Brachypodium distachyon Stiff brome 2 1
No Yes Oryza barthii 22 African wild rice 3 1
No Yes Oryza glumaepatula 22   3 1
No Yes Oryza glaberrima African rice 3 1
No Yes Oryza punctata 22   3 1
No Yes Oryza nivara 22   3 1
No Yes Oryza brachyantha 22 Malo sina 3 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 3 1
No Yes Oryza sativa v193 Rice 3 1
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 5 2
No Yes Panicum virgatum v202 Switchgrass 2 2
No Yes Setaria italica v164 Foxtail millet 3 1
No Yes Zea mays subsp. mays Maize 1 1
No Yes Zea mays v181 Maize 1 1
No Yes Sorghum bicolor Sorghum 2 1
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 1 1
No Yes Amborella trichopoda 22   1 1
No Yes Volvox carteri f. nagariensis   1 1
No Yes Volvox carteri v199   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Thecamonas trahens ATCC 50062   1 1
No Yes Thalassiosira pseudonana CCMP1335   2 1
No Yes Guillardia theta CCMP2712 v1.0   1 1
No Yes Emiliania huxleyi CCMP1516   12 2
No Yes Thermobaculum terrenum ATCC BAA-798   1 1
No Yes Leptolyngbya sp. PCC 7376   1 1
No Yes Acaryochloris marina MBIC11017   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Microcoleus sp. PCC 7113   1 1
No Yes Gloeocapsa sp. PCC 7428   1 1
No Yes Rivularia sp. PCC 7116   2 1
No Yes Calothrix sp. PCC 7507   1 1
No Yes Anabaena variabilis ATCC 29413   2 1
No Yes Nostoc sp. PCC 7107   2 1
No Yes Nostoc punctiforme PCC 73102   1 1
No Yes Nostoc sp. PCC 7120   2 2
No Yes Nostoc sp. PCC 7524   2 2
No Yes Cryptobacterium curtum DSM 15641   14 6
No Yes Eggerthella sp. YY7918   14 3
No Yes Eggerthella lenta DSM 2243   8 3
No Yes Slackia heliotrinireducens DSM 20476   12 5
No Yes Olsenella uli DSM 7084   18 7
No Yes Atopobium parvulum DSM 20469   9 4
No Yes Coriobacterium glomerans PW2   3 3
No Yes Ilumatobacter coccineus   1 1
No Yes Nakamurella multipartita DSM 44233   3 3
No Yes Modestobacter marinus   2 2
No Yes Blastococcus saxobsidens DD2   2 2
No Yes Geodermatophilus obscurus DSM 43160   2 2
No Yes Kineococcus radiotolerans SRS30216   4 2
No Yes Catenulispora acidiphila DSM 44928   2 2
No Yes Stackebrandtia nassauensis DSM 44728   1 1
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   2 2
No Yes Thermomonospora curvata DSM 43183   2 2
No Yes Streptosporangium roseum DSM 43021   1 1
No Yes Kitasatospora setae KM-6054   1 1
No Yes Streptomyces coelicolor A3(2)   3 3
No Yes Streptomyces sp. PAMC26508   3 3
No Yes Streptomyces flavogriseus ATCC 33331   3 3
No Yes Streptomyces sp. SirexAA-E   4 4
No Yes Streptomyces griseus subsp. griseus NBRC 13350   3 3
No Yes Streptomyces bingchenggensis BCW-1   3 3
No Yes Streptomyces violaceusniger Tu 4113   2 2
No Yes Streptomyces avermitilis MA-4680   4 4
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   6 6
No Yes Streptomyces scabiei 87.22   7 7
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   3 3
No Yes Actinosynnema mirum DSM 43827   10 5
No Yes Pseudonocardia dioxanivorans CB1190   4 4
No Yes Saccharopolyspora erythraea NRRL 2338   2 2
No Yes Amycolatopsis mediterranei U32   1 1
No Yes Kribbella flavida DSM 17836   1 1
No Yes Nocardioides sp. JS614   1 1
No Yes Propionibacterium propionicum F0230a   1 1
No Yes Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1   1 1
No Yes Salinispora arenicola CNS-205   1 1
No Yes Verrucosispora maris AB-18-032   1 1
No Yes Actinoplanes sp. SE50/110   1 1
No Yes Actinoplanes missouriensis 431   1 1
No Yes Gordonia polyisoprenivorans VH2   3 2
No Yes Gordonia bronchialis DSM 43247   1 1
No Yes Rhodococcus jostii RHA1   1 1
No Yes Rhodococcus equi 103S   2 1
No Yes Rhodococcus opacus B4   2 2
No Yes Rhodococcus erythropolis PR4   2 2
No Yes Nocardia cyriacigeorgica GUH-2   1 1
No Yes Mycobacterium massiliense str. GO 06   1 1
No Yes Mycobacterium abscessus ATCC 19977   1 1
No Yes Mycobacterium ulcerans Agy99   1 1
No Yes Mycobacterium marinum M   1 1
No Yes Corynebacterium jeikeium K411   6 2
No Yes Sanguibacter keddieii DSM 10542   2 2
No Yes Beutenbergia cavernae DSM 12333   2 2
No Yes Microbacterium testaceum StLB037   2 1
No Yes Clavibacter michiganensis subsp. michiganensis NCPPB 382   3 3
No Yes [Cellvibrio] gilvus ATCC 13127   1 1
No Yes Arthrobacter aurescens TC1   2 2
No Yes Arthrobacter sp. FB24   2 2
No Yes Bifidobacterium longum subsp. longum JDM301   2 2
No Yes Bifidobacterium dentium Bd1   5 5
No Yes Bifidobacterium breve ACS-071-V-Sch8b   2 2
No Yes Bifidobacterium bifidum S17   3 3
No Yes Bifidobacterium adolescentis ATCC 15703   1 1
No Yes Arcanobacterium haemolyticum DSM 20595   3 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   2 2
No Yes Dehalococcoides sp. BAV1   1 1
No Yes Anaerolinea thermophila UNI-1   1 1
No Yes Herpetosiphon aurantiacus DSM 785   1 1
No Yes Roseiflexus sp. RS-1   2 2
No Yes Roseiflexus castenholzii DSM 13941   1 1
No Yes Chloroflexus sp. MS-G   2 1
No Yes Chloroflexus sp. Y-400-fl   2 1
No Yes Chloroflexus aggregans DSM 9485   1 1
No Yes Chloroflexus aurantiacus J-10-fl   2 1
No Yes Deinococcus maricopensis DSM 21211   1 1
No Yes Deinococcus proteolyticus MRP   1 1
No Yes Deinococcus radiodurans R1   1 1
No Yes Meiothermus ruber DSM 1279   1 1
No Yes Thermus sp. CCB_US3_UF1   1 1
No Yes Anaerococcus prevotii DSM 20548   8 2
No Yes Finegoldia magna ATCC 29328   16 8
No Yes Erysipelothrix rhusiopathiae str. Fujisawa   29 3
No Yes Natranaerobius thermophilus JW/NM-WN-LF   1 1
No Yes Clostridiales genomosp. BVAB3 str. UPII9-5   4 3
No Yes Clostridium clariflavum DSM 19732   1 1
No Yes Eubacterium siraeum   8 3
No Yes Ethanoligenens harbinense YUAN-3   11 1
No Yes Ruminococcus sp.   4 4
No Yes Ruminococcus bromii   4 3
No Yes Ruminococcus albus 7   7 4
No Yes Oscillibacter valericigenes Sjm18-20   14 3
No Yes Desulfosporosinus orientis DSM 765   1 1
No Yes Desulfitobacterium hafniense Y51   4 4
No Yes Desulfitobacterium dehalogenans ATCC 51507   1 1
No Yes Eubacterium eligens ATCC 27750   2 1
No Yes Eubacterium limosum KIST612   22 7
No Yes Clostridium difficile 630   1 1
No Yes Filifactor alocis ATCC 35896   9 4
No Yes Clostridium saccharolyticum WM1   4 3
No Yes Clostridium phytofermentans ISDg   4 1
No Yes [Ruminococcus] obeum   6 4
No Yes [Ruminococcus] torques   3 2
No Yes Eubacterium rectale M104/1   4 2
No Yes Eubacterium rectale ATCC 33656   3 2
No Yes Coprococcus sp. ART55/1   3 1
No Yes Roseburia intestinalis   1 1
No Yes Butyrivibrio proteoclasticus B316   10 5
No Yes Syntrophomonas wolfei subsp. wolfei str. Goettingen   1 1
No Yes Clostridium novyi NT   1 1
No Yes Clostridium beijerinckii NCIMB 8052   1 1
No Yes Clostridium tetani E88   2 1
No Yes Clostridium perfringens ATCC 13124   4 3
No Yes Clostridium cellulovorans 743B   7 1
No Yes Thermodesulfobium narugense DSM 14796   1 1
No Yes Acetohalobium arabaticum DSM 5501   1 1
No Yes Halanaerobium praevalens DSM 2228   1 1
No Yes Carnobacterium sp. 17-4   1 1
No Yes Aerococcus urinae ACS-120-V-Col10a   3 1
No Yes Melissococcus plutonius DAT561   31 4
No Yes Enterococcus sp. 7L76   9 3
No Yes Enterococcus hirae ATCC 9790   5 5
No Yes Enterococcus faecium Aus0004   11 5
No Yes Enterococcus faecalis 62   13 6
No Yes Weissella koreensis KACC 15510   15 2
No Yes Oenococcus oeni PSU-1   10 2
No Yes Leuconostoc sp. C2   3 2
No Yes Leuconostoc kimchii IMSNU 11154   3 2
No Yes Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293   2 1
No Yes Leuconostoc gasicomitatum LMG 18811   2 1
No Yes Lactobacillus casei ATCC 334   9 5
No Yes Lactobacillus rhamnosus Lc 705   9 3
No Yes Lactobacillus salivarius CECT 5713   10 3
No Yes Lactobacillus sakei subsp. sakei 23K   5 2
No Yes Lactobacillus plantarum JDM1   5 2
No Yes Lactobacillus buchneri NRRL B-30929   2 1
No Yes Lactobacillus brevis ATCC 367   3 2
No Yes Pediococcus claussenii ATCC BAA-344   8 2
No Yes Pediococcus pentosaceus ATCC 25745   1 1
No Yes Lactococcus garvieae ATCC 49156   1 1
No Yes Lactococcus lactis subsp. cremoris MG1363   3 2
No Yes Streptococcus sp. I-P16   15 5
No Yes Streptococcus sp. I-G2   14 4
No Yes Streptococcus intermedius JTH08   12 5
No Yes Streptococcus gallolyticus UCN34   15 4
No Yes Streptococcus equi subsp. equi 4047   4 2
No Yes Streptococcus dysgalactiae subsp. equisimilis GGS_124   3 2
No Yes Streptococcus macedonicus ACA-DC 198   2 1
No Yes Streptococcus parasanguinis ATCC 15912   6 2
No Yes Streptococcus pyogenes str. Manfredo   1 1
No Yes Streptococcus agalactiae A909   3 3
No Yes Streptococcus suis P1/7   2 2
No Yes Streptococcus sanguinis SK36   17 6
No Yes Streptococcus oralis Uo5   6 2
No Yes Streptococcus gordonii str. Challis substr. CH1   3 3
No Yes Exiguobacterium sp. AT1b   10 2
No Yes Brevibacillus brevis NBRC 100599   4 1
No Yes Paenibacillus terrae HPL-003   2 2
No Yes Paenibacillus mucilaginosus 3016   1 1
No Yes Paenibacillus polymyxa M1   1 1
No Yes Bacillus selenitireducens MLS10   23 2
No Yes Listeria welshimeri serovar 6b str. SLCC5334   28 6
No Yes Listeria innocua Clip11262   22 6
No Yes Listeria seeligeri serovar 1/2b str. SLCC3954   18 5
No Yes Listeria monocytogenes serotype 4b str. CLIP 80459   18 5
No Yes Listeria ivanovii subsp. ivanovii PAM 55   12 4
No Yes Lysinibacillus sphaericus C3-41   1 1
No Yes Geobacillus thermoleovorans CCB_US3_UF5   1 1
No Yes Bacillus sp. JS   8 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   8 1
No Yes Bacillus halodurans C-125   12 2
No Yes Bacillus weihenstephanensis KBAB4   50 4
No Yes Bacillus thuringiensis str. Al Hakam   41 5
No Yes Bacillus cereus 03BB102   27 4
No Yes Bacillus anthracis str. A0248   7 2
No Yes Bacillus clausii KSM-K16   4 1
No Yes Bacillus pumilus SAFR-032   10 1
No Yes Macrococcus caseolyticus JCSC5402   3 1
No Yes Gemmatimonas aurantiaca T-27   5 5
No Yes Ignavibacterium album JCM 16511   1 1
No Yes Pelodictyon phaeoclathratiforme BU-1   1 1
No Yes Chlorobium luteolum DSM 273   1 1
No Yes Chlorobium chlorochromatii CaD3   1 1
No Yes Chlorobium phaeovibrioides DSM 265   1 1
No Yes Prosthecochloris aestuarii DSM 271   2 2
No Yes Haliscomenobacter hydrossis DSM 1100   1 1
No Yes Saprospira grandis str. Lewin   2 2
No Yes Niastella koreensis GR20-10   3 3
No Yes Chitinophaga pinensis DSM 2588   3 3
No Yes Marivirga tractuosa DSM 4126   5 5
No Yes Fibrella aestuarina   2 2
No Yes Leadbetterella byssophila DSM 17132   3 3
No Yes Dyadobacter fermentans DSM 18053   4 4
No Yes Cytophaga hutchinsonii ATCC 33406   4 4
No Yes Spirosoma linguale DSM 74   4 4
No Yes Runella slithyformis DSM 19594   2 2
No Yes Paludibacter propionicigenes WB4   1 1
No Yes Bacteroides sp. CF50   1 1
No Yes Prevotella melaninogenica ATCC 25845   1 1
No Yes Prevotella intermedia 17   1 1
No Yes Prevotella denticola F0289   1 1
No Yes Bacteroides fragilis YCH46   1 1
No Yes Pedobacter saltans DSM 12145   3 3
No Yes Solitalea canadensis DSM 3403   2 2
No Yes Pedobacter heparinus DSM 2366   4 4
No Yes Sphingobacterium sp. 21   2 2
No Yes Fluviicola taffensis DSM 16823   6 6
No Yes Owenweeksia hongkongensis DSM 17368   1 1
No Yes Zunongwangia profunda SM-A87   1 1
No Yes Krokinobacter sp. 4H-3-7-5   1 1
No Yes Gramella forsetii KT0803   1 1
No Yes Lacinutrix sp. 5H-3-7-4   1 1
No Yes Maribacter sp. HTCC2170   2 2
No Yes Robiginitalea biformata HTCC2501   1 1
No Yes Croceibacter atlanticus HTCC2559   2 2
No Yes Zobellia galactanivorans   4 4
No Yes Muricauda ruestringensis DSM 13258   2 2
No Yes Cellulophaga algicola DSM 14237   3 3
No Yes Cellulophaga lytica DSM 7489   2 2
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   1 1
No Yes Capnocytophaga canimorsus Cc5   1 1
No Yes Capnocytophaga ochracea DSM 7271   1 1
No Yes Flavobacterium indicum GPTSA100-9   2 2
No Yes Flavobacterium branchiophilum FL-15   2 2
No Yes Flavobacterium columnare ATCC 49512   3 3
No Yes Flavobacterium johnsoniae UW101   7 7
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Isosphaera pallida ATCC 43644   2 2
No Yes Planctomyces brasiliensis DSM 5305   2 2
No Yes Planctomyces limnophilus DSM 3776   3 3
No Yes Rhodopirellula baltica SH 1   2 2
No Yes Pirellula staleyi DSM 6068   3 3
No Yes Aminobacterium colombiense DSM 12261   1 1
No Yes Turneriella parva DSM 21527   1 1
No Yes Treponema azotonutricium ZAS-9   4 2
No Yes Treponema succinifaciens DSM 2489   2 2
No Yes Spirochaeta africana DSM 8902   1 1
No Yes Desulfurispirillum indicum S5   1 1
No Yes Marinitoga piezophila KA3   2 2
No Yes Fervidobacterium pennivorans DSM 9078   1 1
No Yes Fervidobacterium nodosum Rt17-B1   1 1
No Yes Thermosipho melanesiensis BI429   1 1
No Yes Thermovibrio ammonificans HB-1   1 1
No Yes Desulfurobacterium thermolithotrophum DSM 11699   1 1
No Yes Elusimicrobium minutum Pei191   1 1
No Yes Candidatus Chloracidobacterium thermophilum B   2 2
No Yes Candidatus Solibacter usitatus Ellin6076   7 6
No Yes Granulicella tundricola MP5ACTX9   5 4
No Yes Granulicella mallensis MP5ACTX8   5 5
No Yes Candidatus Koribacter versatilis Ellin345   2 2
No Yes Terriglobus saanensis SP1PR4   1 1
No Yes Terriglobus roseus DSM 18391   5 5
No Yes Acidobacterium capsulatum ATCC 51196   2 2
No Yes Thermodesulfovibrio yellowstonii DSM 11347   1 1
No Yes Candidatus Nitrospira defluvii   1 1
No Yes Leptospirillum ferrooxidans C2-3   2 1
No Yes Bacteriovorax marinus SJ   1 1
No Yes Arcobacter nitrofigilis DSM 7299   1 1
No Yes Desulfarculus baarsii DSM 2075   1 1
No Yes Desulfobacca acetoxidans DSM 11109   1 1
No Yes Syntrophobacter fumaroxidans MPOB   1 1
No Yes Desulfotalea psychrophila LSv54   2 2
No Yes Desulfobulbus propionicus DSM 2032   3 3
No Yes Desulfatibacillum alkenivorans AK-01   1 1
No Yes Geobacter uraniireducens Rf4   1 1
No Yes Haliangium ochraceum DSM 14365   1 1
No Yes Sorangium cellulosum 'So ce 56'   3 3
No Yes Anaeromyxobacter dehalogenans 2CP-1   1 1
No Yes Myxococcus xanthus DK 1622   3 3
No Yes Myxococcus fulvus HW-1   1 1
No Yes Azoarcus sp. BH72   1 1
No Yes Thiomonas intermedia K12   1 1
No Yes Burkholderia phymatum STM815   1 1
No Yes Burkholderia xenovorans LB400   1 1
No Yes Cupriavidus necator N-1   1 1
No Yes Ralstonia eutropha H16   1 1
No Yes Ramlibacter tataouinensis TTB310   1 1
No Yes Rhodoferax ferrireducens T118   1 1
No Yes Acidovorax ebreus TPSY   2 2
No Yes Acidovorax sp. JS42   2 2
No Yes Acidovorax citrulli AAC00-1   1 1
No Yes Acidovorax avenae subsp. avenae ATCC 19860   1 1
No Yes Bordetella avium 197N   1 1
No Yes Achromobacter xylosoxidans A8   1 1
No Yes Achromobacter xylosoxidans   1 1
No Yes Parvularcula bermudensis HTCC2503   1 1
No Yes Erythrobacter litoralis HTCC2594   1 1
No Yes Sphingopyxis alaskensis RB2256   1 1
No Yes Sphingobium chlorophenolicum L-1   1 1
No Yes Micavibrio aeruginosavorus ARL-13   1 1
No Yes Sinorhizobium meliloti AK83   1 1
No Yes Mesorhizobium sp. BNC1   2 2
No Yes Bradyrhizobium japonicum USDA 110   1 1
No Yes Gallibacterium anatis UMN179   1 1
No Yes Ferrimonas balearica DSM 9799   1 1
No Yes Shewanella halifaxensis HAW-EB4   1 1
No Yes Shewanella sediminis HAW-EB3   1 1
No Yes Shewanella baltica OS185   1 1
No Yes Pseudoalteromonas sp. SM9913   2 2
No Yes Glaciecola nitratireducens FR1064   1 1
No Yes Alteromonas sp. SN2   1 1
No Yes Kangiella koreensis DSM 16069   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas oryzae pv. oryzae PXO99A   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia pestis Pestoides F   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   1 1
No Yes Candidatus Caldiarchaeum subterraneum   2 2
No Yes Pyrolobus fumarii 1A   1 1
No Yes Ignisphaera aggregans DSM 17230   1 1
No Yes Acidianus hospitalis W1   2 2
No Yes Sulfolobus tokodaii str. 7   1 1
No Yes Sulfolobus acidocaldarius DSM 639   1 1
No Yes Thermofilum sp. 1910b   1 1
No Yes Thermofilum pendens Hrk 5   1 1
No Yes halophilic archaeon DL31   2 2
No Yes Methanocella arvoryzae MRE50   5 5
No Yes Methanocella paludicola SANAE   3 3
No Yes Methanosaeta harundinacea 6Ac   12 2
No Yes Methanosaeta concilii GP6   1 1
No Yes Methanohalobium evestigatum Z-7303   1 1
No Yes Methanohalophilus mahii DSM 5219   3 2
No Yes Methanocorpusculum labreanum Z   1 1
No Yes Archaeoglobus profundus DSM 5631   1 1
No Yes Thermococcus gammatolerans EJ3   1 1
No Yes Thermoplasmatales archaeon BRNA1   1 1
No Yes Thermoplasma volcanium GSS1   1 1
No Yes Natrialba magadii ATCC 43099   4 4
No Yes Halorubrum lacusprofundi ATCC 49239   1 1
No Yes Haloquadratum walsbyi DSM 16790   1 1
No Yes Haloferax mediterranei ATCC 33500   1 1
No Yes Halomicrobium mukohataei DSM 12286   1 1
No Yes Haloarcula hispanica ATCC 33960   1 1
No Yes Halalkalicoccus jeotgali B3   1 1
No Yes Methanothermobacter marburgensis str. Marburg   1 1
No Yes Methanosphaera stadtmanae DSM 3091   1 1
No Yes Methanobrevibacter sp. AbM4   1 1
No Yes Methanobrevibacter ruminantium M1   11 1
No Yes Methanobrevibacter smithii ATCC 35061   2 2
No Yes Aciduliprofundum sp. MAR08-339   1 1
No Yes Aciduliprofundum boonei T469   1 1
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 1 1
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 2 1
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 2 1
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 3 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-P   1 1
No Yes Synechocystis sp. PCC 6803 substr. PCC-N   1 1
No Yes Synechocystis sp. PCC 6803 substr. GT-I   1 1
No Yes Synechocystis sp. PCC 6803   1 1
No Yes Prochlorococcus marinus str. MIT 9301   1 1
No Yes Prochlorococcus marinus str. MIT 9215   1 1
No Yes Cyanothece sp. PCC 7822   1 1
No Yes Cyanothece sp. PCC 7424   1 1
No Yes Cyanobacterium aponinum PCC 10605   1 1
No Yes Cyanobacterium stanieri PCC 7202   1 1
No Yes Calothrix parietina Calothrix sp. PCC 6303   1 1
No Yes Cylindrospermum stagnale PCC 7417   2 1
No Yes Gordonibacter pamelaeae 7-10-1-b   4 4
No Yes Nocardiopsis alba ATCC BAA-2165   2 2
No Yes Streptomyces albus J1074   2 2
No Yes Streptomyces rapamycinicus NRRL 5491   5 4
No Yes Streptomyces davawensis JCM 4913   6 6
No Yes Streptomyces fulvissimus DSM 40593   5 5
No Yes Streptomyces venezuelae ATCC 10712   3 3
No Yes Streptomyces collinus Tu 365   4 4
No Yes Streptomyces cattleya NRRL 8057 = DSM 46488   7 7
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   3 3
No Yes Saccharothrix espanaensis DSM 44229   3 3
No Yes Amycolatopsis mediterranei RB   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis mediterranei S699   1 1
No Yes Amycolatopsis orientalis HCCB10007   2 2
No Yes Propionibacterium acidipropionici ATCC 4875   1 1
No Yes Actinoplanes friuliensis DSM 7358   1 1
No Yes Rhodococcus erythropolis CCM2595   2 2
No Yes Nocardia brasiliensis ATCC 700358   1 1
No Yes Mycobacterium abscessus subsp. bolletii 50594   1 1
No Yes Mycobacterium liflandii 128FXT   1 1
No Yes Corynebacterium diphtheriae VA01   1 1
No Yes Clavibacter michiganensis subsp. sepedonicus   2 2
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   1 1
No Yes Bifidobacterium longum NCC2705   2 2
No Yes Bifidobacterium longum DJO10A   2 2
No Yes Bifidobacterium longum subsp. infantis 157F   2 2
No Yes Bifidobacterium longum subsp. longum KACC 91563   1 1
No Yes Bifidobacterium longum subsp. longum BBMN68   2 2
No Yes Bifidobacterium longum subsp. longum F8   1 1
No Yes Bifidobacterium longum subsp. longum JCM 1217   2 2
No Yes Bifidobacterium thermophilum RBL67   2 2
No Yes Bifidobacterium animalis subsp. animalis ATCC 25527   2 2
No Yes Bifidobacterium breve UCC2003   3 3
No Yes Bifidobacterium bifidum PRL2010   2 2
No Yes Bifidobacterium bifidum BGN4   3 3
No Yes Dehalococcoides mccartyi GY50   1 1
No Yes Chthonomonas calidirosea T49   3 3
No Yes Thermus thermophilus JL-18   1 1
No Yes Thermus thermophilus HB8   1 1
No Yes [Eubacterium] cylindroides [Eubacterium] cylindroides T2-87   8 4
No Yes Erysipelothrix rhusiopathiae SY1027   24 4
No Yes Eubacterium siraeum V10Sc8a   3 1
No Yes Ruminococcus champanellensis 18P13   5 4
No Yes Clostridium acidurici 9a   5 1
No Yes Desulfitobacterium hafniense DCB-2   6 4
No Yes Clostridium difficile BI1   1 1
No Yes Clostridium difficile R20291   1 1
No Yes Clostridium difficile CD196   1 1
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   2 1
No Yes Coprococcus catus GD/7   11 5
No Yes Roseburia intestinalis XB6B4   1 1
No Yes Clostridium sp. SY8519   23 7
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   1 1
No Yes Clostridium tetani genome 12124569   2 1
No Yes Clostridium perfringens SM101   1 1
No Yes Clostridium perfringens str. 13   6 2
No Yes Clostridium botulinum H04402 065   1 1
No Yes Clostridium botulinum BKT015925   3 2
No Yes Clostridium botulinum E3 str. Alaska E43   1 1
No Yes Thermacetogenium phaeum DSM 12270   1 1
No Yes Carnobacterium maltaromaticum LMA28   27 8
No Yes Melissococcus plutonius ATCC 35311   9 3
No Yes Enterococcus mundtii QU 25   4 3
No Yes Enterococcus casseliflavus EC20   8 5
No Yes Enterococcus faecium Aus0085   14 10
No Yes Enterococcus faecium NRRL B-2354   5 2
No Yes Enterococcus faecium DO   11 6
No Yes Enterococcus faecalis str. Symbioflor 1   10 4
No Yes Enterococcus faecalis D32   16 9
No Yes Enterococcus faecalis OG1RF   22 6
No Yes Enterococcus faecalis V583   10 5
No Yes Leuconostoc carnosum JB16   2 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides J18   2 1
No Yes Leuconostoc gelidum JB7   2 1
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   9 5
No Yes Lactobacillus casei LOCK919   13 7
No Yes Lactobacillus casei W56   12 5
No Yes Lactobacillus casei LC2W   11 4
No Yes Lactobacillus casei BD-II   11 4
No Yes Lactobacillus casei BL23   7 4
No Yes Lactobacillus casei str. Zhang   11 5
No Yes Lactobacillus rhamnosus LOCK908   7 2
No Yes Lactobacillus rhamnosus LOCK900   6 2
No Yes Lactobacillus rhamnosus ATCC 8530   3 2
No Yes Lactobacillus rhamnosus GG   3 2
No Yes Lactobacillus rhamnosus GG   3 2
No Yes Lactobacillus plantarum 16   5 2
No Yes Lactobacillus plantarum ZJ316   5 2
No Yes Lactobacillus plantarum subsp. plantarum ST-III   5 2
No Yes Lactobacillus plantarum subsp. plantarum P-8   4 2
No Yes Lactobacillus plantarum WCFS1   5 2
No Yes Lactobacillus brevis KB290   3 2
No Yes Pediococcus pentosaceus SL4   1 1
No Yes Lactococcus garvieae Lg2   1 1
No Yes Lactococcus lactis subsp. lactis KLDS 4.0325   12 4
No Yes Lactococcus lactis subsp. lactis IO-1   10 3
No Yes Lactococcus lactis subsp. lactis CV56   12 4
No Yes Lactococcus lactis subsp. lactis KF147   2 1
No Yes Lactococcus lactis subsp. lactis Il1403   10 3
No Yes Lactococcus lactis subsp. cremoris KW2   10 2
No Yes Lactococcus lactis subsp. cremoris UC509.9   4 1
No Yes Lactococcus lactis subsp. cremoris A76   6 1
No Yes Lactococcus lactis subsp. cremoris NZ9000   2 1
No Yes Lactococcus lactis subsp. cremoris SK11   6 1
No Yes Streptococcus constellatus subsp. pharyngis C1050   3 3
No Yes Streptococcus constellatus subsp. pharyngis C818   3 3
No Yes Streptococcus constellatus subsp. pharyngis C232   3 3
No Yes Streptococcus intermedius B196   13 6
No Yes Streptococcus intermedius C270   6 4
No Yes Streptococcus anginosus C238   2 1
No Yes Streptococcus anginosus C1051   9 2
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069   18 4
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC 43143   18 4
No Yes Streptococcus equi subsp. zooepidemicus ATCC 35246   6 4
No Yes Streptococcus equi subsp. zooepidemicus MGCS10565   7 5
No Yes Streptococcus equi subsp. zooepidemicus   7 4
No Yes Streptococcus dysgalactiae subsp. equisimilis 167   5 3
No Yes Streptococcus dysgalactiae subsp. equisimilis AC-2713   4 3
No Yes Streptococcus dysgalactiae subsp. equisimilis ATCC 12394   3 2
No Yes Streptococcus dysgalactiae subsp. equisimilis RE378   4 3
No Yes Streptococcus parasanguinis FW213   6 2
No Yes Streptococcus pyogenes HSC5   1 1
No Yes Streptococcus pyogenes MGAS1882   4 1
No Yes Streptococcus pyogenes MGAS15252   4 1
No Yes Streptococcus pyogenes Alab49   1 1
No Yes Streptococcus pyogenes MGAS10750   3 2
No Yes Streptococcus pyogenes MGAS10270   5 3
No Yes Streptococcus pyogenes MGAS2096   6 2
No Yes Streptococcus pyogenes MGAS9429   4 1
No Yes Streptococcus pyogenes MGAS6180   4 1
No Yes Streptococcus pyogenes NZ131   4 1
No Yes Streptococcus pyogenes MGAS8232   1 1
No Yes Streptococcus pyogenes MGAS10394   2 2
No Yes Streptococcus pyogenes MGAS315   1 1
No Yes Streptococcus pyogenes SSI-1   1 1
No Yes Streptococcus pneumoniae A026   4 2
No Yes Streptococcus pneumoniae ST556   4 2
No Yes Streptococcus pneumoniae INV200   1 1
No Yes Streptococcus pneumoniae TCH8431/19A   4 2
No Yes Streptococcus pneumoniae CGSP14   1 1
No Yes Streptococcus pneumoniae JJA   1 1
No Yes Streptococcus pneumoniae Hungary19A-6   5 3
No Yes Streptococcus pneumoniae Taiwan19F-14   4 2
No Yes Streptococcus pneumoniae 670-6B   5 3
No Yes Streptococcus pneumoniae TIGR4   4 2
No Yes Streptococcus agalactiae 09mas018883   5 5
No Yes Streptococcus agalactiae GD201008-001   1 1
No Yes Streptococcus agalactiae NEM316   4 4
No Yes Streptococcus agalactiae 2603V/R   4 4
No Yes Streptococcus mutans LJ23   1 1
No Yes Streptococcus suis T15   3 2
No Yes Streptococcus suis SC070731   2 2
No Yes Streptococcus suis S735   3 3
No Yes Streptococcus suis ST3   2 2
No Yes Streptococcus suis ST1   1 1
No Yes Streptococcus suis A7   3 3
No Yes Streptococcus suis JS14   3 3
No Yes Streptococcus suis BM407   3 3
No Yes Streptococcus suis SC84   3 3
No Yes Streptococcus suis GZ1   5 4
No Yes Streptococcus suis 98HAH33   2 2
No Yes Streptococcus suis 05ZYH33   3 3
No Yes Paenibacillus mucilaginosus K02   1 1
No Yes Paenibacillus polymyxa CR1   1 1
No Yes Paenibacillus polymyxa SC2   1 1
No Yes Listeria monocytogenes EGD sequence   22 6
No Yes Listeria monocytogenes N53-1   22 6
No Yes Listeria monocytogenes La111   22 6
No Yes Listeria monocytogenes serotype 4b str. LL195   21 6
No Yes Listeria monocytogenes 07PF0776   21 7
No Yes Listeria monocytogenes M7   23 7
No Yes Listeria monocytogenes J1-220   22 7
No Yes Listeria monocytogenes J1816   20 6
No Yes Listeria monocytogenes SLCC2376   28 7
No Yes Listeria monocytogenes SLCC5850   22 6
No Yes Listeria monocytogenes ATCC 19117   22 7
No Yes Listeria monocytogenes L312   20 6
No Yes Listeria monocytogenes SLCC2479   23 6
No Yes Listeria monocytogenes SLCC7179   21 6
No Yes Listeria monocytogenes SLCC2540   21 7
No Yes Listeria monocytogenes SLCC2378   22 7
No Yes Listeria monocytogenes serotype 1/2b str. SLCC2755   19 6
No Yes Listeria monocytogenes serotype 1/2c str. SLCC2372   23 6
No Yes Listeria monocytogenes serotype 7 str. SLCC2482   21 7
No Yes Listeria monocytogenes 08-5578   24 6
No Yes Listeria monocytogenes 08-5923   23 6
No Yes Listeria monocytogenes L99   23 7
No Yes Listeria monocytogenes HCC23   23 7
No Yes Listeria monocytogenes 10403S   22 6
No Yes Listeria monocytogenes J0161   24 7
No Yes Listeria monocytogenes Finland 1998   23 6
No Yes Listeria monocytogenes FSL R2-561   23 6
No Yes Listeria monocytogenes serotype 4b str. F2365   21 6
No Yes Listeria monocytogenes EGD-e   25 7
No Yes Amphibacillus xylanus NBRC 15112   19 1
No Yes Bacillus amyloliquefaciens subsp. plantarum sequencing   8 1
No Yes Bacillus amyloliquefaciens subsp. plantarum AS43.3   8 1
No Yes Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2   7 1
No Yes Bacillus amyloliquefaciens subsp. plantarum CAU B946   8 1
No Yes Bacillus amyloliquefaciens LFB112   8 1
No Yes Bacillus amyloliquefaciens IT-45   8 1
No Yes Bacillus amyloliquefaciens XH7   9 1
No Yes Bacillus amyloliquefaciens LL3   8 1
No Yes Bacillus amyloliquefaciens TA208   8 1
No Yes Bacillus amyloliquefaciens DSM 7   8 1
No Yes Bacillus licheniformis 9945A   8 1
No Yes Bacillus subtilis XF-1   8 1
No Yes Bacillus subtilis subsp. subtilis str. BAB-1   8 1
No Yes Bacillus subtilis subsp. subtilis str. BSP1   8 1
No Yes Bacillus subtilis subsp. subtilis str. RO-NN-1   8 1
No Yes Bacillus subtilis subsp. spizizenii TU-B-10   8 1
No Yes Bacillus subtilis subsp. spizizenii str. W23   8 1
No Yes Bacillus licheniformis DSM 13 = ATCC 14580   8 1
No Yes Bacillus cereus subsp. cytotoxis NVH 391-98   6 2
No Yes Bacillus toyonensis BCT-7112   31 4
No Yes Bacillus thuringiensis HD-771   40 5
No Yes Bacillus thuringiensis HD-789   74 9
No Yes Bacillus thuringiensis MC28   78 8
No Yes Bacillus thuringiensis serovar chinensis CT-43   54 6
No Yes Bacillus thuringiensis YBT-1518   69 11
No Yes Bacillus thuringiensis Bt407   54 7
No Yes Bacillus thuringiensis serovar konkukian str. 97-27   26 2
No Yes Bacillus thuringiensis serovar kurstaki str. HD73   50 8
No Yes Bacillus thuringiensis BMB171   41 7
No Yes Bacillus thuringiensis serovar finitimus YBT-020   25 2
No Yes Bacillus thuringiensis serovar thuringiensis str. IS5056   60 7
No Yes Bacillus cereus FRI-35   43 9
No Yes Bacillus cereus biovar anthracis str. CI   27 2
No Yes Bacillus cereus AH820   33 3
No Yes Bacillus cereus AH187   37 8
No Yes Bacillus cereus B4264   58 6
No Yes Bacillus cereus G9842   54 6
No Yes Bacillus cereus Q1   31 6
No Yes Bacillus cereus F837/76   27 4
No Yes Bacillus cereus NC7401   32 7
No Yes Bacillus cereus E33L   29 3
No Yes Bacillus cereus ATCC 14579   59 6
No Yes Bacillus cereus ATCC 10987   40 6
No Yes Bacillus anthracis str. H9401   21 4
No Yes Bacillus anthracis str. CDC 684   21 4
No Yes Bacillus anthracis str. 'Ames Ancestor'   7 2
No Yes Bacillus anthracis str. Sterne   7 2
No Yes Bacillus anthracis str. Ames   7 2
No Yes Staphylococcus aureus CA-347   6 1
No Yes Staphylococcus aureus Bmb9393   4 1
No Yes Staphylococcus aureus 08BA02176   6 1
No Yes Staphylococcus aureus subsp. aureus Z172   4 1
No Yes Staphylococcus aureus subsp. aureus 6850   6 1
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412   6 1
No Yes Staphylococcus aureus subsp. aureus T0131   4 1
No Yes Staphylococcus aureus subsp. aureus LGA251   5 1
No Yes Staphylococcus aureus subsp. aureus TW20   4 1
No Yes Staphylococcus aureus subsp. aureus 55/2053   8 1
No Yes Staphylococcus aureus subsp. aureus TCH60   6 1
No Yes Staphylococcus aureus subsp. aureus str. JKD6008   4 1
No Yes Staphylococcus aureus subsp. aureus S0385   8 1
No Yes Staphylococcus aureus subsp. aureus MSSA476   8 1
No Yes Staphylococcus aureus subsp. aureus MRSA252   8 1
No Yes Staphylococcus aureus subsp. aureus MW2   8 1
No Yes Chlorobium phaeobacteroides BS1   1 1
No Yes Salinibacter ruber DSM 13855   1 1
No Yes Echinicola vietnamensis DSM 17526   2 2
No Yes Emticicia oligotrophica DSM 17448   3 3
No Yes Prevotella sp. oral taxon 299 str. F0039   1 1
No Yes Prevotella dentalis DSM 3688   2 2
No Yes Alistipes shahii WAL 8301   1 1
No Yes Bacteroides fragilis 638R   1 1
No Yes Nonlabens dokdonensis DSW-6   1 1
No Yes Riemerella anatipestifer RA-CH-2   1 1
No Yes Riemerella anatipestifer ATCC 11845 = DSM 15868   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Singulisphaera acidiphila DSM 18658   4 4
No Yes Leptospirillum ferriphilum ML-04   2 1
No Yes Bdellovibrio bacteriovorus str. Tiberius   1 1
No Yes Geobacter sp. M18   1 1
No Yes Sorangium cellulosum So0157-2   1 1
No Yes Anaeromyxobacter sp. K   2 2
No Yes Anaeromyxobacter dehalogenans 2CP-C   1 1
No Yes Achromobacter xylosoxidans NBRC 15126 = ATCC 27061   1 1
No Yes Micavibrio aeruginosavorus EPB   1 1
No Yes Sinorhizobium fredii HH103   1 1
No Yes Sinorhizobium meliloti 2011   1 1
No Yes Sinorhizobium meliloti GR4   1 1
No Yes Sinorhizobium meliloti Rm41   1 1
No Yes Sinorhizobium meliloti SM11   1 1
No Yes Sinorhizobium meliloti BL225C   1 1
No Yes Sinorhizobium meliloti 1021   1 1
No Yes Rhodopseudomonas palustris HaA2   1 1
No Yes Bradyrhizobium japonicum USDA 6   1 1
No Yes Shewanella baltica OS678   1 1
No Yes Shewanella baltica OS117   1 1
No Yes Shewanella baltica OS195   1 1
No Yes Shewanella baltica OS155   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   1 1
No Yes Alteromonas macleodii AltDE1   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   1 1
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Spiribacter salinus M19-40   1 1
No Yes Yersinia pseudotuberculosis PB1/+   1 1
No Yes Yersinia pseudotuberculosis YPIII   1 1
No Yes Yersinia pseudotuberculosis IP 32953   1 1
No Yes Yersinia pestis biovar Microtus str. 91001   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis Antiqua   1 1
No Yes Yersinia pestis Angola   1 1
No Yes Yersinia pestis CO92   1 1
No Yes Yersinia pestis KIM10+   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   1 1
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   1 1
No Yes Pseudomonas putida NBRC 14164   1 1
No Yes Pseudomonas putida GB-1   1 1
No Yes Candidatus Nitrososphaera gargensis Ga9.2   1 1
No Yes Sulfolobus acidocaldarius SUSAZ   1 1
No Yes Sulfolobus acidocaldarius Ron12/I   1 1
No Yes Sulfolobus acidocaldarius N8   1 1
No Yes Methanomethylovorans hollandica DSM 15978   3 2
No Yes Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1   2 2
No Yes Natrinema pellirubrum DSM 15624   2 1
No Yes Haloquadratum walsbyi C23   1 1
No Yes Halorhabdus tiamatea SARL4B   1 1
No Yes Haloarcula hispanica N601   1 1
No Yes Methanococcus maripaludis C6   6 1
No Yes Lotus japonicus (Early assembly)   1 1
No Yes Malus x domestica (Duplicate) Apple 4 3
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   4 2
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 2 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 2 1
No Yes Phoenix dactylifera (Early draft) Date palm 2 2
No Yes Pongo abelii 69_2 Sumatran orangutan 1 1
No Yes Macaca mulatta 69_1 Rhesus monkey 1 1
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 1 1
No Yes Bos taurus 69_3.1 Cattle 1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 1 1
No Yes Ailuropoda melanoleuca 69_1 Giant panda 1 1
No Yes Pteropus vampyrus 69_1 Large flying fox 1 1
No Yes Petromyzon marinus 69_7.0 Sea lamprey 1 1
No Yes Latimeria chalumnae 69_1 Coelacanth 1 1
No Yes Ciona intestinalis 69 Vase tunicate 1 1
No Yes Drosophila melanogaster 69_5 Fruit fly 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 1_050719N (meta-genome)   3 3
No Yes 2_050719S (meta-genome)   10 9
No Yes 3_050719R (meta-genome)   8 6
No Yes 3_Below_base_of_euphotic (meta-genome)   1 1
No Yes 4_050719Q (meta-genome)   11 11
No Yes 5_050719P (meta-genome)   17 17
No Yes 5_Below_upper_mesopelagic (meta-genome)   1 1
No Yes 7_Oxygen_minimum_layer (meta-genome)   3 3
No Yes Activated sludge plasmid pool Visp-2009 (Newbler) (meta-genome)   3 2
No Yes Air microbial communities Singapore indoor air filters 1 (meta-genome)   2 2
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   4 4
No Yes Bath Hot Springs, planktonic community (meta-genome)   1 1
No Yes Combined (meta-genome)   20 20
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   17 13
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   1 1
No Yes Dump bottom (Dump bottom) (meta-genome)   37 36
No Yes Dump top (Dump top) (meta-genome)   43 42
No Yes Endophytic microbiome from Rice (meta-genome)   3 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   4 4
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   8 8
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #3 (meta-genome)   4 3
No Yes Freshwater propionate enrichment of Brocadia fulgida (meta-genome)   7 7
No Yes Fungus garden combined (combined) (meta-genome)   17 15
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   26 23
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   39 35
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 02(H) (meta-genome)   4 3
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   6 4
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 08(T) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   2 2
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   8 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP8 from OSP Spring (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP1 from Alice Springs, Crater Hills (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP11 from Octopus Springs (meta-genome)   16 16
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP12 from Calcite Springs, Tower Falls Region (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP13 from Bechler Spring (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP14 from OSP Spring (meta-genome)   3 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   18 18
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome)   8 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   12 12
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   16 16
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP19 from Cistern Spring (meta-genome)   6 6
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP2 from Nymph Lake 10 (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   14 14
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP3 from Monarch Geyser, Norris Geyser Basin (meta-genome)   9 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP4 from Joseph's Coat Springs (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   10 9
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   7 7
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   8 8
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP9 from Dragon Spring, Norris Geyser Basin (meta-genome)   3 3
No Yes Human Gut Community Subject 7 (meta-genome)   54 30
No Yes Human Gut Community Subject 8 (meta-genome)   66 40
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   125 91
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   14 14
No Yes Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Soil sample from rhizosphere of corn (Zea mays))< (meta-genome)   11 11
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   41 37
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   22 19
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   2 2
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   6 6
No Yes Methylotrophic community from Lake Washington sediment Methanol enrichment (meta-genome)   7 6
No Yes Methylotrophic community from Lake Washington sediment Methylamine enrichment (meta-genome)   5 5
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   22 22
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   10 10
No Yes Mouse Gut Community ob1 (meta-genome)   2 1
No Yes Mouse Gut Community ob2 (meta-genome)   4 3
No Yes NCBI 2017_08 genome   141202 57459
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   29 28
No Yes Olavius algarvensis endosymbiont metagenome Delta1 (meta-genome)   2 2
No Yes Olavius algarvensis endosymbiont metagenome Delta4 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   7 6
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   8 8
No Yes simMC - Simulated Medium Complexity Metagenome (meta-genome)   8 7
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Sludge/US, Jazz Assembly (meta-genome)   1 1
No Yes Sludge/US, Phrap Assembly (meta-genome)   2 2
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   38 37
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   43 43
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   45 45
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   24 24
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   26 26
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+ (Oak Ridge elevated CO2) (meta-genome)   34 34
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   48 48
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   6 5
No Yes STRING v9.0.5 (STRING)   1365 542
No Yes Switchgrass field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing switchgr (meta-genome)   9 9
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   26 26
No Yes Switchgrass soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample from switchgrass (Panicum virg (meta-genome)   8 8
No Yes Termite Protist Endosymbiont Community (meta-genome)   1 1
No Yes Uniprot 2018_03 genome   47876 20117
No Yes Uranium Contaminated Groundwater FW106 (meta-genome)   1 1
No Yes Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome)   26 23
No Yes Global Ocean Sampling Expedition (GOS)   283 273
No Yes NCBI plasmid sequences (Plasmids)   228 79
No Yes PDB chains (SCOP 1.75) (PDB)   7 3
No Yes Protein Data Bank (all PDB sequenc)   161 127
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   210 210
No Yes TargetDB (Targets)   74 26

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