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Cna protein B-type domain family domain assignments
in
all bacterial and archaeal genomes

Assignment details

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25 selected genomes have 78 significant domains in 42 proteins.

Showing genomes 1 to 25 of 44
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Atopobium parvulum DSM 20469 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|257784764|ref|YP_003179981.1|   6.67e-28   0.0001   611-702   1d2o A:535-624  
  4.71e-19   0.001   884-971   1d2o A:535-624  
  4.12e-18   0.00089   794-881   1d2o A:535-624  
  6.28e-18   0.00087   705-791   1d2o A:535-624  
  5.49e-16   0.0014   522-608   1d2o A:625-721  
  0.000000137   0.015   439-504   1ti6 B:196-274  
 
Weak hits:
gi|257783998|ref|YP_003179215.1|   0.00000000981   0.017   360-432   1d2o A:535-624  
gi|257785061|ref|YP_003180278.1|   0.000000000628   0.008   338-401   1d2o A:535-624  
gi|257785062|ref|YP_003180279.1|   0.00275   0.0085   465-546   1d2o A:625-721  
gi|257785153|ref|YP_003180370.1|   0.0000228   0.015   503-567   1ti6 B:196-274  
  0.0177   0.026   242-309   1d2o A:625-721  

Melissococcus plutonius DAT561 has 13 significant domains in 3 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|379726797|ref|YP_005318982.1|   2.94e-27   0.0000719   1124-1212   1d2o A:535-624  
  2.94e-27   0.0000719   1486-1574   1d2o A:535-624  
  3.34e-27   0.0000657   944-1032   1d2o A:535-624  
  4.71e-27   0.0000759   1305-1393   1d2o A:535-624  
  5.49e-27   0.00012   854-941   1d2o A:535-624  
  5.49e-27   0.0000787   1666-1754   1d2o A:535-624  
  5.89e-27   0.0001   1576-1663   1d2o A:535-624  
  6.28e-27   0.0001   1034-1121   1d2o A:535-624  
  2.75e-25   0.00014   1756-1838   1d2o A:535-624  
  6.28e-25   0.0001   1214-1302   1d2o A:535-624  
  6.28e-25   0.0001   1395-1483   1d2o A:535-624  
  0.0000118   0.013   751-818   1ti6 B:196-274  
gi|399140293|ref|YP_006546394.1|   7.85e-29   0.0000879   429-514   1d2o A:535-624  
  1.63e-28   0.0001   610-694   1d2o A:535-624  
  3.92e-28   0.00011   520-604   1d2o A:535-624  
  4.51e-28   0.0001   700-784   1d2o A:535-624  
  3.73e-24   0.00039   337-424   1d2o A:535-624  
  8.24e-16   0.00048   790-842   1d2o A:535-624  
gi|399140294|ref|YP_006546395.1|   1.96e-28   0.0001   64-148   1d2o A:535-624  
  4.12e-28   0.00011   154-238   1d2o A:535-624  
  1.31e-26   0.00015   244-329   1d2o A:535-624  
  9.61e-16   0.00069   2-58   1d2o A:535-624  
 
Weak hits:
gi|379726798|ref|YP_005318983.1|   5.3e-27   0.00012   243-329   1d2o A:535-624  
  5.3e-27   0.00012   423-509   1d2o A:535-624  
  6.28e-27   0.00014   603-690   1d2o A:535-624  
  8.24e-27   0.00014   513-600   1d2o A:535-624  
  1.45e-26   0.00013   63-149   1d2o A:535-624  
  2.55e-26   0.00015   693-779   1d2o A:535-624  
  7.65e-26   0.00014   153-240   1d2o A:535-624  
  7.65e-26   0.00014   333-420   1d2o A:535-624  
  0.000000000000275   0.00093   5-59   1d2o A:535-624  
gi|379728128|ref|YP_005320313.1|   0.031   0.02   343-384   1ti6 B:196-274  

Enterococcus faecium Aus0004 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|383329609|ref|YP_005355493.1|   2.75e-31   0.0000787   531-618   1d2o A:535-624  
  0.00000000000000706   0.013   432-516   1d2o A:625-721  
  0.000243   0.016   341-399   1ti6 B:196-274  
 
Weak hits:
gi|383315292|ref|YP_005376140.1|   0.0002   0.018   228-278   1ti6 B:196-274  
  0.000432   0.012   560-604   1ti6 B:196-274  
gi|383327732|ref|YP_005353616.1|   0.000471   0.0095   288-343   1ti6 B:196-274  
gi|383327841|ref|YP_005353725.1|   0.000863   0.015   451-490   1ti6 B:196-274  
gi|383328249|ref|YP_005354133.1|   0.00000000000353   0.0077   647-766   1d2o A:535-624  
  0.00000216   0.011   888-954   1ti6 B:196-274  
  0.000216   0.012   993-1054   1ti6 B:196-274  
gi|383328250|ref|YP_005354134.1|   0.0000589   0.017   334-411   1ti6 B:196-274  
gi|383328251|ref|YP_005354135.1|   0.000589   0.026   484-567   1ti6 B:196-274  
gi|383329130|ref|YP_005355014.1|   0.0667   0.02   293-349   1ti6 B:196-274  
gi|383329131|ref|YP_005355015.1|   0.00000224   0.016   7-57   1ti6 B:196-274  
  0.000149   0.014   164-206   1ti6 B:196-274  
gi|383329133|ref|YP_005355017.1|   0.000106   0.02   199-247   1ti6 B:196-274  
gi|383329185|ref|YP_005355069.1|   0.0051   0.02   388-460   1ti6 B:196-274  
gi|383329893|ref|YP_005355777.1|   0.00000000318   0.012   996-1065   1ti6 B:196-274  
  0.00000000863   0.013   903-971   1ti6 B:196-274  
  0.00000000981   0.013   810-878   1ti6 B:196-274  
  0.0000000118   0.011   624-686   1ti6 B:196-274  
  0.000000118   0.013   722-785   1ti6 B:196-274  
gi|383330040|ref|YP_005355924.1|   0.00153   0.02   387-456   1ti6 B:196-274  

Leuconostoc gasicomitatum LMG 18811 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|300173364|ref|YP_003772530.1|   4.71e-30   0.0000634   482-570   1d2o A:535-624  
  1.31e-25   0.00032   394-479   1d2o A:535-624  

Lactobacillus salivarius CECT 5713 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|385839627|ref|YP_005863115.1|   4.71e-33   0.0000569   9-96   1d2o A:535-624  
  3.34e-30   0.00013   99-184   1d2o A:535-624  
gi|385839628|ref|YP_005863116.1|   5.3e-31   0.0000445   340-428   1d2o A:535-624  
  0.00000628   0.022   258-320   1d2o A:535-624  
  0.000196   0.0018   430-455   1d2o A:625-721  
 
Weak hits:
gi|385840894|ref|YP_005864218.1|   1.04e-24   0.00011   942-1031   1d2o A:535-624  
  6.8e-24   0.00018   847-938   1d2o A:535-624  
  0.0000000000114   0.0066   398-489   1d2o A:535-624  
  0.000000196   0.0018   1035-1088   1d2o A:625-721  
  0.0000259   0.015   202-263   1ti6 B:196-274  
  0.000053   0.0052   279-394   1d2o A:535-624  

Streptococcus sp. I-P16 has 3 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|552630370|ref|YP_008688113.1|   1.96e-28   0.0000669   525-612   1d2o A:535-624  
  1.88e-26   0.00012   432-522   1d2o A:535-624  
  0.0000239   0.014   349-413   1ti6 B:196-274  
gi|552630520|ref|YP_008688268.1|   2.16e-25   0.0000964   1160-1248   1d2o A:535-624  
  1.75e-24   0.00013   1251-1339   1d2o A:625-721  
  3.34e-24   0.00042   1060-1142   1d2o A:535-624  
  4.12e-24   0.00011   1634-1725   1d2o A:625-721  
  8.44e-24   0.00016   1348-1437   1d2o A:625-721  
  2.16e-23   0.0000961   1542-1631   1d2o A:535-624  
  2.75e-23   0.00017   1445-1540   1d2o A:625-721  
  0.00000000263   0.0095   957-1023   1ti6 B:196-274  
 
Weak hits:
gi|552629497|ref|YP_008687228.1|   1.86e-19   0.00063   355-439   1d2o A:625-721  
gi|552630459|ref|YP_008688204.1|   0.0112   0.01   648-716   1d2o A:535-624  
gi|552630469|ref|YP_008688216.1|   0.0000137   0.017   1124-1199   1ti6 B:196-274  
  0.0000706   0.016   336-401   1ti6 B:196-274  
  0.00102   0.021   1245-1321   1ti6 B:196-274  
  0.00173   0.021   1005-1078   1ti6 B:196-274  
  0.0175   0.0086   539-614   1d2o A:535-624  
  0.0667   0.01   443-505   1d2o A:535-624  
gi|552630703|ref|YP_008688457.1|   0.00000022   0.021   345-411   1ti6 B:196-274  

Streptococcus sp. I-G2 has 3 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|552738406|ref|YP_008690383.1|   4.71e-28   0.0000746   525-612   1d2o A:535-624  
  4.9e-26   0.00012   432-522   1d2o A:535-624  
  0.0000247   0.014   349-413   1ti6 B:196-274  
gi|552738548|ref|YP_008690530.1|   2.16e-25   0.0000964   1160-1248   1d2o A:535-624  
  9.42e-25   0.00011   1634-1725   1d2o A:625-721  
  1.75e-24   0.00013   1251-1339   1d2o A:625-721  
  3.34e-24   0.00042   1060-1142   1d2o A:535-624  
  3.53e-24   0.00015   1348-1437   1d2o A:625-721  
  1.24e-23   0.00016   1445-1540   1d2o A:625-721  
  2.16e-23   0.0000961   1542-1631   1d2o A:535-624  
  0.00000000263   0.0095   957-1023   1ti6 B:196-274  
 
Weak hits:
gi|552738503|ref|YP_008690480.1|   0.0000165   0.017   1342-1417   1ti6 B:196-274  
  0.0000824   0.016   336-401   1ti6 B:196-274  
  0.00122   0.021   1463-1539   1ti6 B:196-274  
  0.00208   0.021   1223-1296   1ti6 B:196-274  
  0.00981   0.0088   539-614   1d2o A:535-624  
  0.0235   0.0091   760-832   1d2o A:535-624  
  0.029   0.0091   648-723   1d2o A:535-624  
  0.0785   0.01   443-505   1d2o A:535-624  
gi|552738730|ref|YP_008690721.1|   0.00000022   0.021   345-411   1ti6 B:196-274  

Streptococcus intermedius JTH08 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
 
Weak hits:
gi|392427948|ref|YP_006468959.1|   0.000279   0.012   330-397   1d2o A:535-624  
gi|392427980|ref|YP_006468991.1|   0.0000000279   0.012   418-482   1d2o A:535-624  
gi|392428995|ref|YP_006470006.1|   0.0000212   0.026   357-423   1ti6 B:196-274  
gi|392428996|ref|YP_006470007.1|   0.0000902   0.014   859-930   1ti6 B:196-274  
gi|392429251|ref|YP_006470263.1|   1.51e-22   0.00018   539-620   1d2o A:535-624  
  0.000000302   0.012   345-411   1d2o A:535-624  
  0.00184   0.014   440-499   1ti6 B:196-274  
gi|392429484|ref|YP_006470498.1|   8.44e-28   0.00017   1166-1255   1d2o A:535-624  
  3.14e-26   0.00016   1074-1163   1d2o A:535-624  

Streptococcus gallolyticus UCN34 has 8 significant domains in 4 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|288904788|ref|YP_003430010.1|   1.59e-32   0.0000338   497-585   1d2o A:535-624  
  5.89e-31   0.0000879   406-493   1d2o A:535-624  
  9.02e-24   0.0001   587-682   1d2o A:625-721  
  0.000000471   0.015   329-389   1ti6 B:196-274  
gi|288905763|ref|YP_003430985.1|   2.16e-31   0.0000453   418-505   1d2o A:535-624  
  1.84e-30   0.000053   327-415   1d2o A:535-624  
  4.71e-27   0.00011   508-587   1d2o A:535-624  
  1.43e-18   0.00047   221-321   1d2o A:535-624  
gi|288906218|ref|YP_003431440.1|   2.35e-30   0.0000415   397-485   1d2o A:535-624  
  7.06e-30   0.0001   306-394   1d2o A:535-624  
  3.73e-23   0.00011   487-581   1d2o A:625-721  
  2.75e-22   0.00033   207-301   1d2o A:625-721  
gi|288906363|ref|YP_003431585.1|   4.9e-29   0.0000929   435-523   1d2o A:535-624  
  5.89e-25   0.00019   526-602   1d2o A:535-624  
  7.85e-21   0.00033   336-430   1d2o A:535-624  
 
Weak hits:
gi|288905762|ref|YP_003430984.1|   0.0051   0.011   352-427   1d2o A:535-624  
gi|288906362|ref|YP_003431584.1|   0.00188   0.011   325-401   1ti6 B:196-274  

Streptococcus equi subsp. equi 4047 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|225870316|ref|YP_002746263.1|   2.55e-29   0.0000802   424-510   1d2o A:535-624  
  7.46e-26   0.00027   325-422   1d2o A:535-624  
  1.41e-24   0.00067   515-598   1d2o A:535-624  
 
Weak hits:
gi|225870317|ref|YP_002746264.1|   0.00902   0.011   327-395   1d2o A:535-624  
gi|225871234|ref|YP_002747181.1|   0.0031   0.01   148-199   1ti6 B:196-274  
gi|225871365|ref|YP_002747312.1|   0.0000471   0.018   183-229   1ti6 B:196-274  
  0.00392   0.014   278-324   1ti6 B:196-274  

Streptococcus parasanguinis ATCC 15912 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|337282500|ref|YP_004621971.1|   9.22e-28   0.0000716   585-675   1d2o A:535-624  
  8.04e-26   0.00017   769-864   1d2o A:625-721  
  2.88e-24   0.0002   677-762   1d2o A:535-624  
  5.1e-17   0.00058   494-570   1d2o A:625-721  
  0.000392   0.021   390-466   1ti6 B:196-274  
gi|337283269|ref|YP_004622740.1|   1.41e-28   0.0000706   525-612   1d2o A:535-624  
  4.12e-26   0.00012   432-522   1d2o A:535-624  
  0.000137   0.017   352-414   1ti6 B:196-274  

Streptococcus sanguinis SK36 has 4 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|125718905|ref|YP_001036038.1|   5.3e-30   0.000059   844-932   1d2o A:535-624  
  2.94e-25   0.0001   754-842   1d2o A:535-624  
  9.81e-25   0.00012   664-752   1d2o A:535-624  
  2.16e-24   0.0000964   1228-1315   1d2o A:535-624  
  1.04e-23   0.0000929   1028-1116   1d2o A:535-624  
  1.82e-23   0.00016   1414-1497   1d2o A:535-624  
  2.94e-22   0.00012   934-1026   1d2o A:535-624  
  5.69e-21   0.00019   1317-1397   1d2o A:535-624  
  4.32e-19   0.00016   1119-1225   1d2o A:535-624  
  2.55e-18   0.00051   565-649   1d2o A:535-624  
  3.14e-18   0.00024   468-559   1d2o A:535-624  
 
Weak hits:
gi|125717104|ref|YP_001034237.1|   2.94e-27   0.00015   430-519   1d2o A:535-624  
  0.00000000298   0.017   342-410   1d2o A:535-624  
gi|125717538|ref|YP_001034671.1|   6.08e-21   0.00029   1141-1227   1d2o A:535-624  
gi|125718437|ref|YP_001035570.1|   0.00051   0.01   335-403   1ti6 B:196-274  
gi|125718438|ref|YP_001035571.1|   0.0549   0.014   336-402   1ti6 B:196-274  
gi|125718439|ref|YP_001035572.1|   0.0247   0.016   338-399   1ti6 B:196-274  
gi|125718466|ref|YP_001035599.1|   0.0000018   0.014   341-406   1ti6 B:196-274  
  0.0033   0.013   999-1072   1ti6 B:196-274  
gi|125718469|ref|YP_001035602.1|   0.0000000589   0.028   369-435   1d2o A:535-624  
gi|125719096|ref|YP_001036229.1|   0.0000942   0.0078   468-519   1ti6 B:196-274  

Clostridium sp. SY8519 has 5 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|339442318|ref|YP_004708323.1|   3.14e-30   0.000059   1084-1171   1d2o A:535-624  
  4.32e-29   0.0000773   1270-1357   1d2o A:535-624  
  3.34e-28   0.0000512   1456-1543   1d2o A:535-624  
  1.86e-24   0.00015   1642-1735   1d2o A:535-624  
  1.92e-23   0.00016   1174-1266   1d2o A:625-721  
  3.14e-23   0.000094   1360-1452   1d2o A:625-721  
  3.14e-22   0.00025   1546-1637   1d2o A:535-624  
  2.16e-20   0.00028   1738-1818   1d2o A:535-624  
gi|339443633|ref|YP_004709638.1|   1.33e-29   0.0000912   905-992   1d2o A:535-624  
  2.35e-22   0.00029   995-1088   1d2o A:625-721  
  0.000000000000294   0.0014   803-890   1d2o A:625-721  
  0.000000000139   0.00063   702-799   1d2o A:535-624  
  0.00000153   0.02   619-685   1ti6 B:196-274  
 
Weak hits:
gi|339441068|ref|YP_004707073.1|   0.0011   0.011   116-151   1ti6 B:196-274  
gi|339441635|ref|YP_004707640.1|   0.0000051   0.00067   207-255   1ti6 B:196-274  
gi|339442367|ref|YP_004708372.1|   0.000204   0.016   1376-1450   1ti6 B:196-274  
gi|339442370|ref|YP_004708375.1|   0.00275   0.016   111-150   1d2o A:535-624  
gi|339442950|ref|YP_004708955.1|   6.47e-18   0.0005   1013-1102   1d2o A:625-721  
  0.0000844   0.0081   955-1000   1d2o A:535-624  
  0.0053   0.005   718-785   1d2o A:625-721  
  0.00902   0.025   1117-1192   1d2o A:535-624  
gi|339442951|ref|YP_004708956.1|   0.00000000824   0.0059   381-444   1ti6 B:196-274  
gi|339442953|ref|YP_004708958.1|   0.00471   0.011   123-153   1ti6 B:196-274  
gi|339443197|ref|YP_004709202.1|   2.55e-25   0.00011   765-846   1d2o A:535-624  
  1.1e-23   0.00013   669-762   1d2o A:535-624  
gi|339443496|ref|YP_004709501.1|   2.35e-23   0.00016   1082-1166   1d2o A:535-624  
  4.32e-21   0.00035   1268-1346   1d2o A:535-624  
  4.32e-21   0.00017   1169-1257   1d2o A:625-721  
  0.00000000000186   0.0021   970-1047   1d2o A:535-624  

Melissococcus plutonius ATCC 35311 has 2 significant domains in 2 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
  2.16e-27   0.0000693   459-547   1d2o A:535-624  
  3.79e-25   0.00014   549-629   1d2o A:535-624  
  0.0000031   0.013   266-333   1ti6 B:196-274  
gi|332687344|ref|YP_004457117.1|   1.51e-29   0.0000879   70-155   1d2o A:535-624  
  3.34e-29   0.00011   161-245   1d2o A:535-624  
  0.0000000000000275   0.00074   251-301   1d2o A:535-624  
  0.00000000000147   0.0019   2-65   1d2o A:535-624  
 
Weak hits:
gi|332685728|ref|YP_004455502.1|   1.43e-27   0.00012   369-456   1d2o A:535-624  
gi|332685729|ref|YP_004455503.1|   0.000000000000216   0.0011   4-59   1d2o A:535-624  
gi|332687271|ref|YP_004457045.1|   0.051   0.02   371-412   1ti6 B:196-274  
  0.0745   0.021   462-496   1ti6 B:196-274  

Enterococcus casseliflavus EC20 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
 
Weak hits:
gi|478484275|ref|YP_007751856.1|   0.0000000000412   0.0086   473-577   1d2o A:625-721  
gi|478484787|ref|YP_007752368.1|   0.0000333   0.015   129-183   1ti6 B:196-274  
gi|478484791|ref|YP_007752372.1|   0.0157   0.022   2593-2626   1ti6 B:196-274  
  0.0549   0.024   2065-2097   1d2o A:625-721  
gi|478485697|ref|YP_007753278.1|   0.0432   0.027   521-564   1ti6 B:196-274  
gi|478485698|ref|YP_007753279.1|   0.00000608   0.0056   711-828   1d2o A:535-624  
  0.000745   0.0066   1055-1120   1ti6 B:196-274  
  0.00349   0.011   946-1009   1ti6 B:196-274  
gi|478486039|ref|YP_007753620.1|   1.96e-28   0.0002   833-922   1d2o A:535-624  
gi|478486342|ref|YP_007753923.1|   0.00051   0.016   99-129   1d2o A:535-624  
gi|478486343|ref|YP_007753924.1|   0.000000000942   0.01   1254-1321   1ti6 B:196-274  
gi|478486711|ref|YP_007754292.1|   0.049   0.01   1163-1215   1d2o A:535-624  

Enterococcus faecium Aus0085 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|529235066|ref|YP_008395878.1|   2.75e-31   0.0000787   531-618   1d2o A:535-624  
  0.00000000000000706   0.013   432-516   1d2o A:625-721  
  0.000243   0.016   341-399   1ti6 B:196-274  
 
Weak hits:
gi|529233064|ref|YP_008393876.1|   0.000471   0.0095   288-343   1ti6 B:196-274  
gi|529233172|ref|YP_008393984.1|   0.000863   0.015   451-490   1ti6 B:196-274  
gi|529234124|ref|YP_008394936.1|   0.000589   0.026   484-567   1ti6 B:196-274  
gi|529234125|ref|YP_008394937.1|   0.0000589   0.017   334-411   1ti6 B:196-274  
gi|529234126|ref|YP_008394938.1|   0.00000000000353   0.0077   647-766   1d2o A:535-624  
  0.00000216   0.011   888-954   1ti6 B:196-274  
  0.000216   0.012   993-1054   1ti6 B:196-274  
gi|529234316|ref|YP_008395128.1|   0.000000589   0.02   24-79   1ti6 B:196-274  
gi|529234317|ref|YP_008395129.1|   0.0000322   0.016   585-653   1ti6 B:196-274  
gi|529234547|ref|YP_008395359.1|   0.0667   0.02   293-349   1ti6 B:196-274  
gi|529234548|ref|YP_008395360.1|   0.00000224   0.016   7-57   1ti6 B:196-274  
  0.000149   0.014   164-206   1ti6 B:196-274  
gi|529234550|ref|YP_008395362.1|   0.000106   0.02   199-247   1ti6 B:196-274  
gi|529234607|ref|YP_008395419.1|   0.0051   0.02   388-460   1ti6 B:196-274  
gi|529235370|ref|YP_008396182.1|   0.000000000157   0.012   49-118   1ti6 B:196-274  
gi|529235371|ref|YP_008396183.1|   0.00000000785   0.013   810-878   1ti6 B:196-274  
  0.00000000942   0.011   624-686   1ti6 B:196-274  
  0.0000000942   0.013   722-785   1ti6 B:196-274  
gi|529235496|ref|YP_008396308.1|   0.00247   0.02   387-459   1ti6 B:196-274  
gi|529235646|ref|YP_008396457.1|   0.0000549   0.018   228-278   1ti6 B:196-274  
gi|529235647|ref|YP_008396458.1|   0.0000745   0.012   128-173   1ti6 B:196-274  

Enterococcus faecium NRRL B-2354 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|447913553|ref|YP_007394965.1|   4.51e-31   0.0000832   491-578   1d2o A:535-624  
  0.00000000000000647   0.013   392-476   1d2o A:625-721  
  0.000251   0.016   301-359   1ti6 B:196-274  
 
Weak hits:
gi|447911878|ref|YP_007393290.1|   0.000471   0.0095   288-343   1ti6 B:196-274  
gi|447911986|ref|YP_007393398.1|   0.000863   0.015   451-490   1ti6 B:196-274  
gi|447913781|ref|YP_007395193.1|   0.00000000251   0.012   810-879   1ti6 B:196-274  
  0.00000000942   0.011   624-686   1ti6 B:196-274  
  0.0000000942   0.013   722-785   1ti6 B:196-274  
gi|447914179|ref|YP_007395433.1|   0.000314   0.016   228-278   1d2o A:535-624  
  0.000471   0.011   560-604   1ti6 B:196-274  

Enterococcus faecium DO has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|389869464|ref|YP_006376887.1|   2.75e-31   0.0000787   531-618   1d2o A:535-624  
  0.00000000000000706   0.013   432-516   1d2o A:625-721  
  0.000243   0.016   341-399   1ti6 B:196-274  
 
Weak hits:
gi|389867605|ref|YP_006375028.1|   0.000471   0.0095   288-343   1ti6 B:196-274  
gi|389867717|ref|YP_006375140.1|   0.000863   0.015   451-490   1ti6 B:196-274  
gi|389868575|ref|YP_006375998.1|   0.000589   0.026   484-567   1ti6 B:196-274  
gi|389868576|ref|YP_006375999.1|   0.0000589   0.017   334-411   1ti6 B:196-274  
gi|389868577|ref|YP_006376000.1|   0.00000000000353   0.0077   647-766   1d2o A:535-624  
  0.00000216   0.011   888-954   1ti6 B:196-274  
  0.000216   0.012   993-1054   1ti6 B:196-274  
gi|389868956|ref|YP_006376379.1|   0.0667   0.02   294-350   1ti6 B:196-274  
gi|389868957|ref|YP_006376380.1|   0.00000224   0.016   7-57   1ti6 B:196-274  
  0.000149   0.014   164-206   1ti6 B:196-274  
gi|389868959|ref|YP_006376382.1|   0.000106   0.02   199-247   1ti6 B:196-274  
gi|389869011|ref|YP_006376434.1|   0.0051   0.02   388-460   1ti6 B:196-274  
gi|389869705|ref|YP_006377128.1|   0.000000000157   0.012   49-118   1ti6 B:196-274  
gi|389869706|ref|YP_006377129.1|   0.00000000239   0.013   800-868   1ti6 B:196-274  
  0.00000000824   0.013   893-961   1ti6 B:196-274  
  0.0000000102   0.011   614-676   1ti6 B:196-274  
  0.000000102   0.013   712-775   1ti6 B:196-274  
gi|389869914|ref|YP_006377464.1|   0.000306   0.016   228-278   1d2o A:535-624  
  0.000471   0.011   560-604   1ti6 B:196-274  

Leuconostoc gelidum JB7 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|406600034|ref|YP_006745380.1|   2.16e-30   0.0000601   482-570   1d2o A:535-624  
  3.53e-25   0.00039   394-479   1d2o A:535-624  

Lactobacillus casei str. Zhang has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|209401040|ref|YP_002268596.1|   3.27e-31   0.0000773   531-618   1d2o A:535-624  
  4.71e-30   0.00014   711-797   1d2o A:535-624  
  9.81e-30   0.00011   621-708   1d2o A:535-624  
  0.0000133   0.025   449-513   1d2o A:535-624  
 
Weak hits:
gi|301065602|ref|YP_003787625.1|   0.0000165   0.0058   509-584   1d2o A:535-624  
  0.00231   0.012   754-822   1ti6 B:196-274  
gi|301067367|ref|YP_003789390.1|   0.00000000706   0.0039   755-819   1ti6 B:196-274  
  0.0000192   0.0094   850-910   1ti6 B:196-274  
gi|301067432|ref|YP_003789455.1|   0.00000228   0.022   346-407   1d2o A:535-624  
gi|301067511|ref|YP_003789534.1|   0.00000000471   0.013   2582-2644   1d2o A:535-624  
  0.0000000942   0.0095   1688-1744   1d2o A:535-624  
  0.000000259   0.0095   2140-2194   1d2o A:535-624  
  0.000126   0.0092   55-120   1ti6 B:196-274  
  0.000259   0.016   1580-1639   1d2o A:535-624  
  0.00188   0.016   2484-2545   1d2o A:535-624  
  0.00824   0.018   2031-2089   1d2o A:535-624  
  0.0149   0.019   1929-1993   1ti6 B:196-274  

Streptococcus intermedius B196 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
 
Weak hits:
gi|538379354|ref|YP_008512048.1|   1.69e-24   0.00025   772-858   1d2o A:535-624  
gi|538379355|ref|YP_008512049.1|   0.000432   0.014   336-408   1d2o A:535-624  
gi|538379386|ref|YP_008512080.1|   0.0000000259   0.012   418-481   1d2o A:535-624  
gi|538379743|ref|YP_008512437.1|   0.0000863   0.014   833-904   1ti6 B:196-274  
gi|538379744|ref|YP_008512438.1|   0.00000000212   0.018   353-422   1ti6 B:196-274  
gi|538380635|ref|YP_008513329.1|   0.0122   0.0098   1189-1247   1ti6 B:196-274  
gi|538380774|ref|YP_008513468.1|   2.55e-22   0.00018   539-620   1d2o A:535-624  
  0.000000365   0.012   345-411   1d2o A:535-624  
  0.00184   0.014   440-499   1ti6 B:196-274  
gi|538380777|ref|YP_008513471.1|   0.000141   0.0089   407-470   1ti6 B:196-274  
gi|538381013|ref|YP_008513707.1|   1.24e-27   0.00016   1166-1255   1d2o A:535-624  
  3.14e-26   0.00016   1074-1163   1d2o A:535-624  

Streptococcus anginosus C1051 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
 
Weak hits:
gi|538369587|ref|YP_008508599.1|   0.000000318   0.016   450-516   1d2o A:535-624  
gi|538371060|ref|YP_008510072.1|   9.61e-28   0.00013   1788-1877   1d2o A:535-624  
  4.9e-27   0.00022   1696-1786   1d2o A:535-624  

Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069 has 11 significant domains in 4 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|325977711|ref|YP_004287427.1|   5.69e-32   0.0000408   777-865   1d2o A:535-624  
  2.55e-31   0.0000453   406-494   1d2o A:535-624  
  6.08e-30   0.0000719   686-774   1d2o A:535-624  
  5.89e-26   0.0000814   593-683   1d2o A:535-624  
  9.61e-24   0.0001   867-962   1d2o A:625-721  
  1.96e-22   0.000082   496-591   1d2o A:625-721  
  0.000000745   0.015   329-389   1ti6 B:196-274  
gi|325978796|ref|YP_004288512.1|   2.75e-31   0.0000494   419-506   1d2o A:535-624  
  2.16e-30   0.0000521   328-416   1d2o A:535-624  
  4.71e-27   0.00011   509-588   1d2o A:535-624  
  1.43e-18   0.00047   222-322   1d2o A:535-624  
gi|325979191|ref|YP_004288907.1|   2.35e-30   0.0000415   397-485   1d2o A:535-624  
  7.06e-30   0.0001   306-394   1d2o A:535-624  
  3.73e-23   0.00011   487-581   1d2o A:625-721  
  2.75e-22   0.00033   207-301   1d2o A:625-721  
gi|325979376|ref|YP_004289092.1|   4.9e-29   0.0000929   435-523   1d2o A:535-624  
  5.89e-25   0.00019   526-602   1d2o A:535-624  
  7.85e-21   0.00033   336-430   1d2o A:535-624  
 
Weak hits:
gi|325978795|ref|YP_004288511.1|   0.0051   0.011   352-427   1d2o A:535-624  
gi|325979375|ref|YP_004289091.1|   0.00188   0.011   325-401   1ti6 B:196-274  

Streptococcus gallolyticus subsp. gallolyticus ATCC 43143 has 11 significant domains in 4 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|386337227|ref|YP_006033396.1|   5.69e-32   0.0000408   777-865   1d2o A:535-624  
  2.55e-31   0.0000453   406-494   1d2o A:535-624  
  6.08e-30   0.0000719   686-774   1d2o A:535-624  
  5.89e-26   0.0000814   593-683   1d2o A:535-624  
  9.61e-24   0.0001   867-962   1d2o A:625-721  
  1.96e-22   0.000082   496-591   1d2o A:625-721  
  0.000000745   0.015   329-389   1ti6 B:196-274  
gi|386338216|ref|YP_006034385.1|   2.16e-31   0.0000453   418-505   1d2o A:535-624  
  1.84e-30   0.000053   327-415   1d2o A:535-624  
  4.71e-27   0.00011   508-587   1d2o A:535-624  
  1.43e-18   0.00047   221-321   1d2o A:535-624  
gi|386338660|ref|YP_006034829.1|   2.35e-30   0.0000415   397-485   1d2o A:535-624  
  7.06e-30   0.0001   306-394   1d2o A:535-624  
  3.73e-23   0.00011   487-581   1d2o A:625-721  
  2.75e-22   0.00033   207-301   1d2o A:625-721  
gi|386338853|ref|YP_006035022.1|   4.9e-29   0.0000929   435-523   1d2o A:535-624  
  5.89e-25   0.00019   526-602   1d2o A:535-624  
  7.85e-21   0.00033   336-430   1d2o A:535-624  
 
Weak hits:
gi|386338215|ref|YP_006034384.1|   0.0051   0.011   352-427   1d2o A:535-624  
gi|386338852|ref|YP_006035021.1|   0.00188   0.011   325-401   1ti6 B:196-274  

Streptococcus equi subsp. zooepidemicus ATCC 35246 has 1 significant domains in 1 proteins.

     

Sequence ID   Superfamily evalue   Family evalue   Region   Closest structure  
gi|414563827|ref|YP_006042788.1|   9.42e-29   0.0000895   416-502   1d2o A:535-624  
  6.28e-26   0.00045   318-414   1d2o A:535-624  
  1e-23   0.00075   507-590   1d2o A:535-624  
 
Weak hits:
gi|414563828|ref|YP_006042789.1|   0.00902   0.011   327-395   1d2o A:535-624  
gi|414564827|ref|YP_006043788.1|   0.000251   0.0095   148-199   1ti6 B:196-274  
gi|414564906|ref|YP_006043867.1|   0.0000471   0.018   192-238   1ti6 B:196-274  
  0.00235   0.014   286-333   1ti6 B:196-274  
gi|414564927|ref|YP_006043888.1|   0.00000000228   0.0075   257-320   1ti6 B:196-274  
  0.0051   0.012   704-770   1d2o A:535-624  
gi|414564930|ref|YP_006043891.1|   0.00000118   0.016   170-248   1ti6 B:196-274  
  0.0118   0.018   96-127   1ti6 B:196-274  

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Select to display   Genome       Domains   Proteins
No Yes ALL   9022 9022
No Yes Atopobium parvulum DSM 20469   1 1
No Yes Melissococcus plutonius DAT561   13 3
No Yes Enterococcus faecium Aus0004   1 1
No Yes Leuconostoc gasicomitatum LMG 18811   1 1
No Yes Lactobacillus salivarius CECT 5713   2 2
No Yes Streptococcus sp. I-P16   3 2
No Yes Streptococcus sp. I-G2   3 2
No Yes Streptococcus intermedius JTH08   1 1
No Yes Streptococcus gallolyticus UCN34   8 4
No Yes Streptococcus equi subsp. equi 4047   1 1
No Yes Streptococcus parasanguinis ATCC 15912   2 2
No Yes Streptococcus sanguinis SK36   4 1
No Yes Clostridium sp. SY8519   5 2
No Yes Melissococcus plutonius ATCC 35311   2 2
No Yes Enterococcus casseliflavus EC20   1 1
No Yes Enterococcus faecium Aus0085   1 1
No Yes Enterococcus faecium NRRL B-2354   1 1
No Yes Enterococcus faecium DO   1 1
No Yes Leuconostoc gelidum JB7   1 1
No Yes Lactobacillus casei str. Zhang   1 1
No Yes Streptococcus intermedius B196   1 1
No Yes Streptococcus anginosus C1051   1 1
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069   11 4
No Yes Streptococcus gallolyticus subsp. gallolyticus ATCC 43143   11 4
No Yes Streptococcus equi subsp. zooepidemicus ATCC 35246   1 1
No Yes Streptococcus equi subsp. zooepidemicus MGCS10565   1 1
No Yes Streptococcus equi subsp. zooepidemicus   1 1
No Yes Streptococcus parasanguinis FW213   2 2
No Yes Staphylococcus aureus CA-347   4 1
No Yes Staphylococcus aureus Bmb9393   2 1
No Yes Staphylococcus aureus 08BA02176   4 1
No Yes Staphylococcus aureus subsp. aureus Z172   2 1
No Yes Staphylococcus aureus subsp. aureus 6850   4 1
No Yes Staphylococcus aureus subsp. aureus HO 5096 0412   4 1
No Yes Staphylococcus aureus subsp. aureus T0131   2 1
No Yes Staphylococcus aureus subsp. aureus LGA251   4 1
No Yes Staphylococcus aureus subsp. aureus TW20   2 1
No Yes Staphylococcus aureus subsp. aureus 55/2053   6 1
No Yes Staphylococcus aureus subsp. aureus TCH60   4 1
No Yes Staphylococcus aureus subsp. aureus str. JKD6008   2 1
No Yes Staphylococcus aureus subsp. aureus S0385   6 1
No Yes Staphylococcus aureus subsp. aureus MSSA476   6 1
No Yes Staphylococcus aureus subsp. aureus MRSA252   6 1
No Yes Staphylococcus aureus subsp. aureus MW2   6 1
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   2 1
No Yes Dump top (Dump top) (meta-genome)   1 1
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   1 1
No Yes Human Gut Community Subject 8 (meta-genome)   8 4
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   3 2
No Yes NCBI 2017_08 genome   7381 3513
No Yes STRING v9.0.5 (STRING)   26 8
No Yes Uniprot 2018_03 genome   1162 445
No Yes NCBI plasmid sequences (Plasmids)   10 7
No Yes PDB chains (SCOP 1.75) (PDB)   7 3
No Yes Protein Data Bank (all PDB sequenc)   53 44
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   168 168

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