SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


beta-Galactosidase/glucuronidase, N-terminal domain family domain assignments


No domain assignments for these genomes.


Add assignments from groups of genomes

View all assignments containing a beta-Galactosidase/glucuronidase, N-terminal domain domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   71122 71122
No Yes Homo sapiens 76_38 Human 5 5
No Yes Pan troglodytes 76_2.1.4 Chimpanzee 1 1
No Yes Gorilla gorilla 76_3.1 Western gorilla 5 5
No Yes Pongo abelii 76_2 Sumatran orangutan 3 3
No Yes Papio anubis 76 Olive baboon 2 2
No Yes Macaca mulatta 76_1 Rhesus monkey 3 3
No Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 7 7
No Yes Otolemur garnettii 76_3 Small-eared galago 1 1
No Yes Microcebus murinus 76_1 Gray mouse lemur 1 1
No Yes Rattus norvegicus 76_5.0 Norway rat 2 2
No Yes Mus musculus 76_38 House mouse 3 3
No Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 1 1
No Yes Heterocephalus glaber v1.7-2 Naked mole-rat 1 1
No Yes Cavia porcellus 76_3 Domestic guinea pig 1 1
No Yes Oryctolagus cuniculus 76_2 Rabbit 1 1
No Yes Ochotona princeps 76 American pika 1 1
No Yes Tupaia belangeri 76 Northern tree shrew 1 1
No Yes Sus scrofa 76_10.2 Pig 1 1
No Yes Bos taurus 76_3.1 Cattle 1 1
No Yes Ovis aries 76_3.1 Sheep 1 1
No Yes Vicugna pacos 76_1 Alpaca 1 1
No Yes Tursiops truncatus 76_1 Bottlenose dolphin 1 1
No Yes Mustela putorius furo 76_1.0 Domestic ferret 1 1
No Yes Ailuropoda melanoleuca 76_1 Giant panda 1 1
No Yes Canis familiaris 76_3.1 Dog 1 1
No Yes Felis catus 76_6.2 Domestic cat 1 1
No Yes Equus caballus 76_2 Horse 1 1
No Yes Myotis lucifugus 76_2.0 Little brown bat 1 1
No Yes Pteropus vampyrus 76_1 Large flying fox 1 1
No Yes Erinaceus europaeus 76 Western European hedgehog 1 1
No Yes Procavia capensis 76_1 Cape rock hyrax 1 1
No Yes Loxodonta africana 76_3 African savanna elephant 1 1
No Yes Echinops telfairi 76 Small Madagascar hedgehog 1 1
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 1 1
No Yes Macropus eugenii 76_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 1 1
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 1 1
No Yes Ornithorhynchus anatinus 76_5 Platypus 2 2
No Yes Saccoglossus kowalevskii v3.0   1 1
No Yes Meleagris gallopavo 76_2 Turkey 1 1
No Yes Gallus gallus 76_4 Chicken 1 1
No Yes Anas platyrhynchos 76_1.0 Mallard 1 1
No Yes Taeniopygia guttata 76_3.2.4 Zebra finch 1 1
No Yes Ficedula albicollis 76_1.0 Collared flycatcher 1 1
No Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 1 1
No Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 76_1 Coelacanth 2 2
No Yes Lepisosteus oculatus 76 Spotted gar 1 1
No Yes Gadus morhua 76_1 Atlantic cod 1 1
No Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 1 1
No Yes Takifugu rubripes 76_4 Torafugu 2 2
No Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 3 3
No Yes Oryzias latipes 76_1 Japanese medaka 2 2
No Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 1 1
No Yes Poecilia formosa 76 Amazon molly 1 1
No Yes Oreochromis niloticus 76_1.0 Nile tilapia 3 3
No Yes Astyanax mexicanus 76 Mexican tetra 1 1
No Yes Danio rerio 76_9 Zebrafish 2 2
No Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 2 2
No Yes Ciona intestinalis 76 Vase tunicate 4 4
No Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 1 1
No Yes Adineta vaga   2 2
No Yes Octopus bimaculoides 280   1 1
No Yes Crassostrea gigas 22 Pacific oyster 1 1
No Yes Lottia gigantea Owl limpet 3 3
No Yes Capitella sp. I   5 5
No Yes Danaus plexippus OGS1.0 Monarch butterfly 1 1
No Yes Heliconius melpomene Postman butterfly 1 1
No Yes Nasonia vitripennis Jewel wasp 2 2
No Yes Apis mellifera 38.2d (Not maintained) Honey bee 3 3
No Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 1 1
No Yes Linepithema humile v1.1 Argentine ant 1 1
No Yes Solenopsis invicta v.2.2.3 Red fire ant 1 1
No Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 1 1
No Yes Atta cephalotes v1.1   1 1
No Yes Camponotus floridanus v3.3 Florida carpenter ant 1 1
No Yes Lucilia cuprina Australian sheep blowfly 2 1
No Yes Drosophila grimshawi 1.3   2 2
No Yes Drosophila willistoni 1.3   3 3
No Yes Drosophila pseudoobscura 2.13   2 2
No Yes Drosophila persimilis 1.3   2 2
No Yes Drosophila suzukii   3 3
No Yes Drosophila yakuba 1.3   2 2
No Yes Drosophila simulans 1.3   1 1
No Yes Drosophila sechellia 1.3   2 2
No Yes Drosophila melanogaster 76_5 Fruit fly 4 4
No Yes Drosophila erecta 1.3   2 2
No Yes Drosophila ananassae 1.3   2 2
No Yes Drosophila virilis 1.2   2 2
No Yes Drosophila mojavensis 1.3   2 2
No Yes Culex pipiens quinquefasciatus Southern house mosquito 1 1
No Yes Anopheles darlingi 22 American malaria mosquito 1 1
No Yes Anopheles gambiae 49_3j African malaria mosquito 1 1
No Yes Tribolium castaneum 3.0 Red flour beetle 5 4
No Yes Pediculus humanus corporis (Early assembly) Human body louse 1 1
No Yes Acyrthosiphon pisum Pea aphid 2 2
No Yes Rhodnius prolixus 22   3 3
No Yes Daphnia pulex Common water flea 2 2
No Yes Strigamia maritima 22   1 1
No Yes Sarcoptes scabiei   1 1
No Yes Tetranychus urticae Two-spotted spider mite 2 2
No Yes Ixodes scapularis (Preliminary) Black-legged tick 1 1
No Yes Pristionchus pacificus   3 3
No Yes Meloidogyne incognita Southern root-knot nematode 2 2
No Yes Onchocerca volvulus 22   1 1
No Yes Brugia malayi WS250 Agent of lymphatic filariasis 1 1
No Yes Caenorhabditis japonica   1 1
No Yes Caenorhabditis brenneri   2 2
No Yes Caenorhabditis remanei   1 1
No Yes Caenorhabditis elegans 76_235 Roundworm 1 1
No Yes Caenorhabditis briggsae 2   1 1
No Yes Trichinella spiralis 22   1 1
No Yes Acropora digitifera v1.0   2 2
No Yes Nematostella vectensis 1.0 Starlet sea anemone 3 3
No Yes Hydra vulgaris   2 2
No Yes Amphimedon queenslandica   4 4
No Yes Trichoplax adhaerens   1 1
No Yes Monosiga brevicollis   1 1
No Yes Rhodotorula graminis WP1 v1.0   1 1
No Yes Sporobolomyces roseus IAM 13481   1 1
No Yes Microbotryum violaceum 22   1 1
No Yes Sphaerobolus stellatus v1.0   2 2
No Yes Piloderma croceum F 1598 v1.0   1 1
No Yes Serpula lacrymans var. lacrymans S7.9   1 1
No Yes Coniophora puteana   2 2
No Yes Hydnomerulius pinastri v2.0   2 2
No Yes Paxillus rubicundulus Ve08.2h10 v1.0   1 1
No Yes Pisolithus microcarpus 441 v1.0   1 1
No Yes Pisolithus tinctorius Marx 270 v1.0   1 1
No Yes Scleroderma citrinum Foug A v1.0   1 1
No Yes Coprinopsis cinerea okayama7 130 v3   1 1
No Yes Pleurotus ostreatus Oyster mushroom 1 1
No Yes Amanita thiersii Skay4041 v1.0   1 1
No Yes Galerina marginata v1.0   1 1
No Yes Hebeloma cylindrosporum h7 v2.0   1 1
No Yes Laccaria bicolor S238N-H82   1 1
No Yes Agaricus bisporus var. bisporus   1 1
No Yes Schizophyllum commune   1 1
No Yes Stereum hirsutum FP-91666 SS1 v1.0   2 2
No Yes Heterobasidion annosum   2 2
No Yes Gloeophyllum trabeumv1.0   2 2
No Yes Punctularia strigosozonata v1.0   1 1
No Yes Sebacina vermifera MAFF 305830 v1.0   2 2
No Yes Fomitiporia mediterranea v1.0   1 1
No Yes Tulasnella calospora AL13/4D v1.0   2 2
No Yes Postia placenta   2 2
No Yes Wolfiporia cocos MD-104 SS10 v1.0   1 1
No Yes Fomitopsis pinicolav1.0   2 2
No Yes Fomitopsis pinicola FP-58527 SS1 v3.0   2 2
No Yes Phanerochaete chrysosporium RP-78 2.1   1 1
No Yes Dichomitus squalens   2 2
No Yes Trametes versicolor v1.0   2 2
No Yes Tremella mesenterica Witches' butter 1 1
No Yes Daldinia eschscholzii EC12 v1.0   4 4
No Yes Apiospora montagnei NRRL 25634 v1.0   6 6
No Yes Magnaporthe poae ATCC 64411 22   6 6
No Yes Magnaporthe grisea 70-15   6 6
No Yes Podospora anserina   4 4
No Yes Sporotrichum thermophile ATCC 42464   3 3
No Yes Thielavia terrestris NRRL 8126   4 4
No Yes Chaetomium globosum CBS 148.51   5 5
No Yes Neurospora tetrasperma   4 4
No Yes Neurospora discreta FGSC 8579   3 3
No Yes Neurospora crassa OR74A   4 4
No Yes Cryphonectria parasitica Chestnut blight fungus 3 3
No Yes Verticillium albo-atrum VaMs.102   4 4
No Yes Verticillium dahliae VdLs.17   3 3
No Yes Acremonium alcalophilumv 1.0   2 2
No Yes Glomerella graminicola 22   4 4
No Yes Fusarium graminearum   7 7
No Yes Nectria haematococca mpVI   8 8
No Yes Fusarium oxysporum f. sp. lycopersici 4286   5 5
No Yes Fusarium verticillioides 7600   6 6
No Yes Trichoderma asperellum CBS 433.97 v1.0   2 2
No Yes Trichoderma atroviride   3 3
No Yes Trichoderma citrinoviride v1.0   2 2
No Yes Trichoderma reesei 1.2   2 2
No Yes Trichoderma virens Gv29-8   5 5
No Yes Trichoderma longibrachiatum ATCC 18648 v1.0   2 2
No Yes Trichoderma harzianum CBS 226.95 v1.0   5 5
No Yes Amorphotheca resinae v1.0 Creosote fungus 2 2
No Yes Botrytis cinerea B05.10   2 2
No Yes Sclerotinia sclerotiorum   2 2
No Yes Didymella exigua CBS 183.55 v1.0   2 2
No Yes Leptosphaeria maculans 22   4 4
No Yes Setosphaeria turcica v1.0   2 2
No Yes Cochliobolus miyabeanus ATCC 44560 v1.0   4 4
No Yes Cochliobolus victoriae FI3 v1.0   4 4
No Yes Cochliobolus carbonum 26-R-13 v1.0   4 4
No Yes Cochliobolus heterostrophus Southern corn leaf blight pathogen 4 4
No Yes Alternaria brassicicola   3 3
No Yes Cochliobolus lunatus m118 v2.0   3 3
No Yes Pyrenophora teres f. teres 22   3 3
No Yes Pyrenophora tritici-repentis   3 3
No Yes Stagonospora nodorum   5 5
No Yes Mycosphaerella graminicola IPO323   3 3
No Yes Zasmidium cellare ATCC 36951 v1.0   5 5
No Yes Dothistroma septosporum   1 1
No Yes Septoria musiva v1.0   1 1
No Yes Mycosphaerella fijiensis CIRAD86   3 3
No Yes Aureobasidium pullulans var. subglaciale EXF-2481 v1.0   2 2
No Yes Coccidioides posadasii RMSCC 3488   1 1
No Yes Coccidioides immitis RS   1 1
No Yes Ajellomyces dermatitidis SLH14081   1 1
No Yes Histoplasma capsulatum class NAmI strain WU24   1 1
No Yes Microsporum canis CBS 113480   1 1
No Yes Trichophyton equinum CBS 127.97   2 2
No Yes Trichophyton verrucosum HKI 0517   1 1
No Yes Arthroderma benhamiae CBS 112371   2 2
No Yes Trichophyton tonsurans CBS 112818   2 2
No Yes Trichophyton rubrum CBS 118892   2 2
No Yes Uncinocarpus reesii 1704   1 1
No Yes Aspergillus zonatus v1.0   2 2
No Yes Penicillium chrysogenum Wisconsin 54-1255   5 5
No Yes Penicillium chrysogenum v1.0   4 4
No Yes Aspergillus acidus v1.0   2 2
No Yes Aspergillus fumigatus Af293   2 2
No Yes Aspergillus brasiliensis v1.0   2 2
No Yes Aspergillus nidulans FGSC A4   4 4
No Yes Aspergillus sydowii v1.0   8 8
No Yes Aspergillus versicolor v1.0   9 9
No Yes Aspergillus glaucus   3 3
No Yes Aspergillus carbonarius ITEM 5010   2 2
No Yes Neosartorya fischeri NRRL 181   2 2
No Yes Aspergillus terreus NIH2624   6 6
No Yes Aspergillus tubingensis v1.0   2 2
No Yes Aspergillus wentii v1.0   2 2
No Yes Aspergillus oryzae RIB40   5 5
No Yes Aspergillus niger 22   2 2
No Yes Aspergillus niger ATCC 1015   1 1
No Yes Aspergillus flavus NRRL3357   4 4
No Yes Aspergillus clavatus NRRL 1   1 1
No Yes Penicillium marneffei ATCC 18224   3 3
No Yes Tuber melanosporum Mel28 22   1 1
No Yes Tuber melanosporum Vittad Perigord truffle 1 1
No Yes Dekkera bruxellensis CBS 2499 v2.0   2 2
No Yes Babjeviella inositovora NRRL Y-12698 v1.0   1 1
No Yes Pichia stipitis CBS 6054   3 3
No Yes Candida guilliermondii ATCC 6260   2 2
No Yes Hyphopichia burtonii NRRL Y-1933 v1.0   3 3
No Yes Debaromyces hansenii   2 2
No Yes Candida lusitaniae ATCC 42720   1 1
No Yes Kluyveromyces lactis   1 1
No Yes Selaginella moellendorffii   2 2
No Yes Eucalyptus grandis v201 Rose gum 1 1
No Yes Theobroma cacao B97-61/B2 v1 Cacao 1 1
No Yes Gossypium raimondii v221   1 1
No Yes Citrus sinensis v154 Sweet orange 3 3
No Yes Thellungiella halophila v173   1 1
No Yes Brassica rapa Chiifu-401 1.2 Field mustard 1 1
No Yes Capsella rubella v183   1 1
No Yes Arabidopsis lyrata Lyrate rockcress 1 1
No Yes Arabidopsis thaliana 10 Thale cress 3 3
No Yes Medicago truncatula Barrel medic 1 1
No Yes Phaseolus vulgaris v186 French bean 1 1
No Yes Glycine max v109 Soybean 1 1
No Yes Cucumis sativus v122 Cucumber 3 3
No Yes Fragaria vesca Wild strawberry 1 1
No Yes Malus domestica v196 Apple 1 1
No Yes Prunus persica v139 Peach 2 2
No Yes Linum usitatissimum v200 Flax 2 2
No Yes Manihot esculenta v147 Cassava 1 1
No Yes Populus trichocarpa v156 Black cottonwood 2 2
No Yes Vitis vinifera Wine grape 1 1
No Yes Mimulus guttatus v140 Spotted monkey flower 1 1
No Yes Solanum lycopersicum v.2.3 Tomato 1 1
No Yes Actinidia chinensis Hongyang   2 2
No Yes Aquilegia coerulea v195   2 2
No Yes Triticum aestivum 22 Bread wheat 2 2
No Yes Aegilops tauschii 22   1 1
No Yes Brachypodium distachyon Stiff brome 1 1
No Yes Oryza barthii 22 African wild rice 1 1
No Yes Oryza meridionalis 22   1 1
No Yes Oryza glumaepatula 22   1 1
No Yes Oryza glaberrima African rice 1 1
No Yes Oryza punctata 22   3 3
No Yes Oryza nivara 22   2 2
No Yes Oryza brachyantha 22 Malo sina 1 1
No Yes Oryza sativa ssp. japonica 5.0 Japanese rice 2 2
No Yes Oryza sativa v193 Rice 1 1
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 1 1
No Yes Setaria italica v164 Foxtail millet 2 2
No Yes Musa balbisiana Balbis banana 1 1
No Yes Musa acuminata 22 Wild Malaysian banana 1 1
No Yes Amborella trichopoda 22   1 1
No Yes Physcomitrella patens   1 1
No Yes Coccomyxa subellipsoidea sp. C-169 v2   1 1
No Yes Asterochloris sp. Cgr/DA1pho v1.0   1 1
No Yes Chlorella variabilis sp. NC64A   1 1
No Yes Chlamydomonas reinhardtii 4.0   1 1
No Yes Ostreococcus sp. RCC809   1 1
No Yes Ostreococcus lucimarinus CCE9901   1 1
No Yes Ostreococcus tauri   1 1
No Yes Bathycoccus prasinos   1 1
No Yes Micromonas sp. RCC299   1 1
No Yes Micromonas pusilla CCMP1545 v3.0   1 1
No Yes Ectocarpus siliculosus   2 2
No Yes Thalassiosira pseudonana CCMP1335   1 1
No Yes Perkinsus marinus ATCC 50983   1 1
No Yes Paramecium tetraurelia   1 1
No Yes Tetrahymena thermophila SB210 1   1 1
No Yes Ichthyophthirius multifiliis strain G5   1 1
No Yes Symbiodinium minutum clade B1 v1.2   2 2
No Yes Guillardia theta CCMP2712 v1.0   2 2
No Yes Emiliania huxleyi CCMP1516   3 3
No Yes Thermobaculum terrenum ATCC BAA-798   1 1
No Yes Coriobacterium glomerans PW2   1 1
No Yes Ilumatobacter coccineus   1 1
No Yes Modestobacter marinus   2 2
No Yes Kineococcus radiotolerans SRS30216   1 1
No Yes Catenulispora acidiphila DSM 44928   4 4
No Yes Frankia sp. EAN1pec   4 4
No Yes Thermobifida fusca YX   1 1
No Yes Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111   2 2
No Yes Streptosporangium roseum DSM 43021   1 1
No Yes Streptomyces coelicolor A3(2)   2 2
No Yes Streptomyces sp. PAMC26508   2 2
No Yes Streptomyces flavogriseus ATCC 33331   2 2
No Yes Streptomyces sp. SirexAA-E   1 1
No Yes Streptomyces bingchenggensis BCW-1   5 5
No Yes Streptomyces violaceusniger Tu 4113   5 5
No Yes Streptomyces avermitilis MA-4680   3 3
No Yes Streptomyces scabiei 87.22   4 4
No Yes Streptomyces hygroscopicus subsp. jinggangensis 5008   4 4
No Yes Actinosynnema mirum DSM 43827   1 1
No Yes Saccharopolyspora erythraea NRRL 2338   1 1
No Yes Amycolatopsis mediterranei U32   5 5
No Yes Kribbella flavida DSM 17836   1 1
No Yes Propionibacterium propionicum F0230a   1 1
No Yes Propionibacterium acnes SK137   2 2
No Yes Microlunatus phosphovorus NM-1   2 2
No Yes Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1   1 1
No Yes Actinoplanes sp. N902-109   1 1
No Yes Segniliparus rotundus DSM 44985   1 1
No Yes Tsukamurella paurometabola DSM 20162   1 1
No Yes Corynebacterium efficiens YS-314   1 1
No Yes Sanguibacter keddieii DSM 10542   1 1
No Yes Beutenbergia cavernae DSM 12333   1 1
No Yes Microbacterium testaceum StLB037   2 2
No Yes Clavibacter michiganensis subsp. michiganensis NCPPB 382   2 2
No Yes Brachybacterium faecium DSM 4810   1 1
No Yes Xylanimonas cellulosilytica DSM 15894   1 1
No Yes Cellulomonas fimi ATCC 484   1 1
No Yes Arthrobacter phenanthrenivorans Sphe3   1 1
No Yes Arthrobacter chlorophenolicus A6   1 1
No Yes Arthrobacter arilaitensis Re117   1 1
No Yes Arthrobacter sp. Rue61a   1 1
No Yes Arthrobacter sp. FB24   1 1
No Yes Renibacterium salmoninarum ATCC 33209   1 1
No Yes Bifidobacterium longum subsp. longum JDM301   1 1
No Yes Bifidobacterium animalis subsp. lactis Bl-04   2 2
No Yes Bifidobacterium dentium Bd1   1 1
No Yes Bifidobacterium breve ACS-071-V-Sch8b   2 2
No Yes Bifidobacterium bifidum S17   1 1
No Yes Bifidobacterium adolescentis ATCC 15703   1 1
No Yes Mobiluncus curtisii ATCC 43063   1 1
No Yes Actinomyces sp. F0330   1 1
No Yes Caldilinea aerophila DSM 14535 = NBRC 104270   2 2
No Yes Anaerolinea thermophila UNI-1   2 2
No Yes Herpetosiphon aurantiacus DSM 785   1 1
No Yes Roseiflexus sp. RS-1   2 2
No Yes Roseiflexus castenholzii DSM 13941   2 2
No Yes Megamonas hypermegale   2 2
No Yes Selenomonas sputigena ATCC 35185   1 1
No Yes Selenomonas ruminantium subsp. lactilytica TAM6421   1 1
No Yes Eubacterium siraeum   1 1
No Yes Clostridium cellulolyticum H10   2 2
No Yes Ethanoligenens harbinense YUAN-3   2 2
No Yes Faecalibacterium prausnitzii   1 1
No Yes Ruminococcus sp.   1 1
No Yes Ruminococcus albus 7   1 1
No Yes butyrate-producing bacterium SM4/1   1 1
No Yes Eubacterium eligens ATCC 27750   2 2
No Yes Clostridium saccharolyticum WM1   3 3
No Yes Clostridium phytofermentans ISDg   1 1
No Yes Clostridium lentocellum DSM 5427   1 1
No Yes [Ruminococcus] obeum   1 1
No Yes [Ruminococcus] torques   1 1
No Yes Eubacterium rectale M104/1   2 2
No Yes Eubacterium rectale ATCC 33656   2 2
No Yes Coprococcus sp. ART55/1   1 1
No Yes Roseburia hominis A2-183   2 2
No Yes Roseburia intestinalis   3 3
No Yes Butyrivibrio proteoclasticus B316   2 2
No Yes Butyrivibrio fibrisolvens   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Japan   1 1
No Yes Clostridium sp. BNL1100   1 1
No Yes Clostridium beijerinckii NCIMB 8052   1 1
No Yes Clostridium perfringens ATCC 13124   2 2
No Yes Clostridium cellulovorans 743B   1 1
No Yes Mahella australiensis 50-1 BON   1 1
No Yes Caldicellulosiruptor obsidiansis OB47   3 3
No Yes Caldicellulosiruptor kronotskyensis 2002   3 3
No Yes Caldicellulosiruptor hydrothermalis 108   2 2
No Yes Caldicellulosiruptor owensensis OL   2 2
No Yes Caldicellulosiruptor lactoaceticus 6A   2 2
No Yes Caldicellulosiruptor kristjanssonii 177R1B   1 1
No Yes Caldicellulosiruptor saccharolyticus DSM 8903   3 3
No Yes Caldicellulosiruptor bescii DSM 6725   2 2
No Yes Thermoanaerobacterium thermosaccharolyticum DSM 571   1 1
No Yes Tepidanaerobacter acetatoxydans Re1   1 1
No Yes Thermoanaerobacter mathranii subsp. mathranii str. A3   1 1
No Yes Thermoanaerobacter pseudethanolicus ATCC 33223   1 1
No Yes Thermoanaerobacter italicus Ab9   1 1
No Yes Thermoanaerobacter wiegelii Rt8.B1   1 1
No Yes Thermoanaerobacter brockii subsp. finnii Ako-1   1 1
No Yes Halothermothrix orenii H 168   1 1
No Yes Halanaerobium hydrogeniformans   1 1
No Yes Halanaerobium praevalens DSM 2228   1 1
No Yes Carnobacterium sp. 17-4   1 1
No Yes Carnobacterium sp. WN1359   1 1
No Yes Enterococcus hirae ATCC 9790   1 1
No Yes Enterococcus faecium Aus0004   1 1
No Yes Enterococcus faecalis 62   1 1
No Yes Weissella koreensis KACC 15510   1 1
No Yes Oenococcus oeni PSU-1   1 1
No Yes Leuconostoc sp. C2   1 1
No Yes Leuconostoc kimchii IMSNU 11154   1 1
No Yes Leuconostoc citreum KM20   1 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293   1 1
No Yes Leuconostoc gasicomitatum LMG 18811   1 1
No Yes Lactobacillus casei ATCC 334   1 1
No Yes Lactobacillus kefiranofaciens ZW3   1 1
No Yes Lactobacillus crispatus ST1   1 1
No Yes Lactobacillus rhamnosus Lc 705   2 2
No Yes Lactobacillus salivarius CECT 5713   1 1
No Yes Lactobacillus fermentum IFO 3956   1 1
No Yes Lactobacillus amylovorus GRL1118   1 1
No Yes Lactobacillus sakei subsp. sakei 23K   1 1
No Yes Lactobacillus reuteri DSM 20016   1 1
No Yes Lactobacillus plantarum JDM1   1 1
No Yes Lactobacillus helveticus DPC 4571   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365   1 1
No Yes Lactobacillus buchneri NRRL B-30929   2 2
No Yes Lactobacillus buchneri   2 2
No Yes Lactobacillus brevis ATCC 367   2 2
No Yes Lactobacillus acidophilus 30SC   1 1
No Yes Pediococcus pentosaceus ATCC 25745   1 1
No Yes Streptococcus infantarius subsp. infantarius CJ18   1 1
No Yes Streptococcus thermophilus LMD-9   1 1
No Yes Streptococcus salivarius 57.I   1 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446   1 1
No Yes Brevibacillus brevis NBRC 100599   1 1
No Yes Paenibacillus sp. JDR-2   4 4
No Yes Paenibacillus terrae HPL-003   3 3
No Yes Paenibacillus mucilaginosus 3016   5 5
No Yes Paenibacillus polymyxa M1   2 2
No Yes Bacillus selenitireducens MLS10   1 1
No Yes Geobacillus thermoglucosidasius C56-YS93   1 1
No Yes Geobacillus sp. WCH70   1 1
No Yes Bacillus halodurans C-125   1 1
No Yes Bacillus cellulosilyticus DSM 2522   2 2
No Yes Bacillus megaterium DSM 319   1 1
No Yes Staphylococcus pseudintermedius HKU10-03   1 1
No Yes Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305   2 2
No Yes Staphylococcus haemolyticus JCSC1435   1 1
No Yes Staphylococcus carnosus subsp. carnosus TM300   1 1
No Yes Melioribacter roseus P3M   3 3
No Yes Haliscomenobacter hydrossis DSM 1100   2 2
No Yes Chitinophaga pinensis DSM 2588   3 3
No Yes Fibrella aestuarina   1 1
No Yes Dyadobacter fermentans DSM 18053   1 1
No Yes Runella slithyformis DSM 19594   2 2
No Yes Parabacteroides distasonis ATCC 8503   2 2
No Yes Tannerella forsythia ATCC 43037   2 2
No Yes Paludibacter propionicigenes WB4   3 3
No Yes Odoribacter splanchnicus DSM 20712   3 3
No Yes Prevotella melaninogenica ATCC 25845   4 4
No Yes Prevotella denticola F0289   2 2
No Yes Prevotella ruminicola 23   2 2
No Yes Porphyromonas gingivalis ATCC 33277   3 3
No Yes Alistipes finegoldii DSM 17242   3 3
No Yes Bacteroides salanitronis DSM 18170   2 2
No Yes Bacteroides helcogenes P 36-108   5 5
No Yes Bacteroides vulgatus ATCC 8482   7 7
No Yes Bacteroides thetaiotaomicron VPI-5482   9 9
No Yes Bacteroides fragilis YCH46   6 6
No Yes Pedobacter saltans DSM 12145   1 1
No Yes Solitalea canadensis DSM 3403   2 2
No Yes Pedobacter heparinus DSM 2366   1 1
No Yes Sphingobacterium sp. 21   3 3
No Yes Fluviicola taffensis DSM 16823   1 1
No Yes Zunongwangia profunda SM-A87   5 5
No Yes Gramella forsetii KT0803   2 2
No Yes Maribacter sp. HTCC2170   4 4
No Yes Aequorivita sublithincola DSM 14238   1 1
No Yes Zobellia galactanivorans   1 1
No Yes Muricauda ruestringensis DSM 13258   1 1
No Yes Cellulophaga lytica DSM 7489   1 1
No Yes Ornithobacterium rhinotracheale DSM 15997   3 3
No Yes Capnocytophaga canimorsus Cc5   2 2
No Yes Capnocytophaga ochracea DSM 7271   3 3
No Yes Flavobacterium indicum GPTSA100-9   1 1
No Yes Flavobacterium johnsoniae UW101   4 4
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Phycisphaera mikurensis NBRC 102666   2 2
No Yes Opitutus terrae PB90-1   2 2
No Yes Akkermansia muciniphila ATCC BAA-835   2 2
No Yes Brachyspira murdochii DSM 12563   1 1
No Yes Brachyspira intermedia PWS/A   1 1
No Yes Brachyspira hyodysenteriae WA1   1 1
No Yes Sphaerochaeta pleomorpha str. Grapes   1 1
No Yes Sphaerochaeta globus str. Buddy   1 1
No Yes Sphaerochaeta coccoides DSM 17374   1 1
No Yes Spirochaeta caldaria DSM 7334   1 1
No Yes Treponema azotonutricium ZAS-9   3 3
No Yes Treponema primitia ZAS-2   1 1
No Yes Treponema brennaborense DSM 12168   1 1
No Yes Treponema succinifaciens DSM 2489   1 1
No Yes Petrotoga mobilis SJ95   1 1
No Yes Thermosipho africanus TCF52B   1 1
No Yes Thermotoga lettingae TMO   2 2
No Yes Thermotoga thermarum DSM 5069   2 2
No Yes Thermotoga sp. RQ2   2 2
No Yes Thermotoga naphthophila RKU-10   2 2
No Yes Thermotoga petrophila RKU-1   2 2
No Yes Thermotoga neapolitana DSM 4359   2 2
No Yes Thermotoga maritima MSB8   2 2
No Yes Dictyoglomus turgidum DSM 6724   2 2
No Yes Dictyoglomus thermophilum H-6-12   3 3
No Yes Candidatus Solibacter usitatus Ellin6076   1 1
No Yes Granulicella mallensis MP5ACTX8   3 3
No Yes Candidatus Koribacter versatilis Ellin345   2 2
No Yes Sebaldella termitidis ATCC 33386   1 1
No Yes Neisseria lactamica 020-06   1 1
No Yes Asticcacaulis excentricus CB 48   5 5
No Yes Novosphingobium aromaticivorans DSM 12444   1 1
No Yes Genome sequence of Rhizobium sp. strain IRBG74   1 1
No Yes Rhizobium etli CIAT 652   1 1
No Yes Rhizobium leguminosarum bv. viciae 3841   1 1
No Yes Agrobacterium radiobacter K84   1 1
No Yes Agrobacterium vitis S4   1 1
No Yes Aggregatibacter aphrophilus NJ8700   1 1
No Yes Gallibacterium anatis UMN179   1 1
No Yes Haemophilus parainfluenzae T3T1   1 1
No Yes Actinobacillus succinogenes 130Z   1 1
No Yes Actinobacillus pleuropneumoniae serovar 5b str. L20   1 1
No Yes Tolumonas auensis DSM 9187   2 2
No Yes Aeromonas veronii B565   2 2
No Yes Aeromonas hydrophila subsp. hydrophila ATCC 7966   2 2
No Yes Vibrio fischeri MJ11   1 1
No Yes Vibrio sp. Ex25   1 1
No Yes Vibrio parahaemolyticus RIMD 2210633   1 1
No Yes Vibrio anguillarum 775   1 1
No Yes Vibrio furnissii NCTC 11218   1 1
No Yes Vibrio vulnificus MO6-24/O   2 2
No Yes Vibrio cholerae O395   1 1
No Yes Photobacterium profundum SS9   2 2
No Yes Psychromonas ingrahamii 37   1 1
No Yes Psychromonas sp. CNPT3   1 1
No Yes Shewanella piezotolerans WP3   1 1
No Yes Shewanella loihica PV-4   1 1
No Yes Shewanella halifaxensis HAW-EB4   1 1
No Yes Shewanella sediminis HAW-EB3   1 1
No Yes Shewanella pealeana ATCC 700345   1 1
No Yes Shewanella amazonensis SB2B   1 1
No Yes Shewanella violacea DSS12   1 1
No Yes Pseudoalteromonas atlantica T6c   3 3
No Yes Glaciecola sp. 4H-3-7+YE-5   2 2
No Yes Glaciecola nitratireducens FR1064   1 1
No Yes Alteromonas sp. SN2   1 1
No Yes Alteromonas macleodii str. 'Deep ecotype'   1 1
No Yes Stenotrophomonas maltophilia K279a   1 1
No Yes Xylella fastidiosa M23   1 1
No Yes Xanthomonas axonopodis pv. citri str. 306   1 1
No Yes Xanthomonas albilineans GPE PC73   1 1
No Yes Xanthomonas oryzae pv. oryzae PXO99A   1 1
No Yes Xanthomonas campestris pv. campestris str. B100   1 1
No Yes Edwardsiella ictaluri 93-146   1 1
No Yes Edwardsiella tarda EIB202   1 1
No Yes Rahnella sp. Y9602   2 2
No Yes Rahnella aquatilis CIP 78.65 = ATCC 33071   1 1
No Yes Yersinia pseudotuberculosis IP 31758   1 1
No Yes Yersinia pestis Pestoides F   1 1
No Yes Yersinia enterocolitica subsp. enterocolitica 8081   1 1
No Yes Serratia sp. AS12   1 1
No Yes Serratia sp. ATCC 39006   1 1
No Yes Serratia plymuthica AS9   1 1
No Yes Serratia proteamaculans 568   2 2
No Yes Dickeya dadantii Ech703   1 1
No Yes Dickeya zeae Ech1591   1 1
No Yes Pectobacterium wasabiae WPP163   1 1
No Yes Pectobacterium sp. SCC3193   1 1
No Yes Pectobacterium atrosepticum SCRI1043   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PC1   1 1
No Yes Pantoea sp. At-9b   1 1
No Yes Pantoea vagans C9-1   1 1
No Yes Pantoea ananatis LMG 20103   1 1
No Yes Erwinia tasmaniensis Et1/99   1 1
No Yes Erwinia sp. Ejp617   1 1
No Yes Erwinia billingiae Eb661   1 1
No Yes Erwinia amylovora ATCC 49946   1 1
No Yes Cronobacter turicensis z3032   1 1
No Yes Cronobacter sakazakii ES15   1 1
No Yes Enterobacteriaceae bacterium strain FGI 57   1 1
No Yes Shigella sonnei Ss046   3 3
No Yes Shigella flexneri 5 str. 8401   2 2
No Yes Shigella dysenteriae Sd197   1 1
No Yes Shigella boydii CDC 3083-94   1 1
No Yes Salmonella bongori NCTC 12419   1 1
No Yes Klebsiella oxytoca E718   2 2
No Yes Klebsiella variicola At-22   1 1
No Yes Klebsiella pneumoniae NTUH-K2044   1 1
No Yes Enterobacter aerogenes KCTC 2190   2 2
No Yes Escherichia fergusonii ATCC 35469   1 1
No Yes Escherichia coli 'BL21-Gold(DE3)pLysS AG'   4 4
No Yes Enterobacter sp. R4-368   1 1
No Yes Enterobacter sp. 638   1 1
No Yes Enterobacter asburiae LF7a   2 2
No Yes Enterobacter cloacae subsp. dissolvens SDM   1 1
No Yes Citrobacter rodentium ICC168   1 1
No Yes Citrobacter koseri ATCC BAA-895   1 1
No Yes Salinarchaeum sp. Harcht-Bsk1   1 1
No Yes Halopiger xanaduensis SH-6   1 1
No Yes Haloterrigena turkmenica DSM 5511   2 2
No Yes Halomicrobium mukohataei DSM 12286   1 1
No Yes Halorhabdus utahensis DSM 12940   1 1
No Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 1 1
No Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 4 4
No Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 1 1
No Yes Ascaris suum Victoria/Ghent Pig roundworm 2 2
No Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 1 1
No Yes Paracoccidioides brasiliensis Pb03   1 1
No Yes Coccidioides posadasii str. Silveira   1 1
No Yes Coccidioides immitis RMSCC 2394   1 1
No Yes Coccidioides immitis H538.4   1 1
No Yes Ajellomyces dermatitidis ER-3   1 1
No Yes Histoplasma capsulatum H143   1 1
No Yes Histoplasma capsulatum H88   1 1
No Yes Histoplasma capsulatum G186AR   1 1
No Yes Aspergillus fumigatus A1163   2 2
No Yes Theobroma cacao Matina 1-6 v0.9 Cacao 1 1
No Yes Hordeum vulgare 22 Domesticated barley 2 2
No Yes Oryza sativa ssp. Indica (Subspecies) Long-grained rice 1 1
No Yes Frankia sp. EuI1c   3 3
No Yes Streptomyces rapamycinicus NRRL 5491   3 3
No Yes Streptomyces davawensis JCM 4913   3 3
No Yes Streptomyces venezuelae ATCC 10712   1 1
No Yes Streptomyces collinus Tu 365   2 2
No Yes Streptomyces hygroscopicus subsp. jinggangensis TL01   4 4
No Yes Saccharothrix espanaensis DSM 44229   1 1
No Yes Amycolatopsis mediterranei RB   5 5
No Yes Amycolatopsis mediterranei S699   5 5
No Yes Amycolatopsis mediterranei S699   5 5
No Yes Amycolatopsis orientalis HCCB10007   2 2
No Yes Propionibacterium avidum 44067   1 1
No Yes Propionibacterium acnes ATCC 11828   2 2
No Yes Propionibacterium acnes TypeIA2 P.acn31   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn17   1 1
No Yes Propionibacterium acnes TypeIA2 P.acn33   1 1
No Yes Propionibacterium acnes C1   2 2
No Yes Propionibacterium acnes HL096PA1   2 2
No Yes Propionibacterium acnes 6609   2 2
No Yes Propionibacterium acnes 266   2 2
No Yes Propionibacterium acnes KPA171202   2 2
No Yes Propionibacterium acidipropionici ATCC 4875   2 2
No Yes Actinoplanes friuliensis DSM 7358   2 2
No Yes Clavibacter michiganensis subsp. sepedonicus   2 2
No Yes Clavibacter michiganensis subsp. nebraskensis NCPPB 2581   2 2
No Yes Gardnerella vaginalis HMP9231   2 2
No Yes Gardnerella vaginalis ATCC 14019   2 2
No Yes Bifidobacterium longum NCC2705   1 1
No Yes Bifidobacterium longum DJO10A   1 1
No Yes Bifidobacterium longum subsp. infantis 157F   2 2
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   1 1
No Yes Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222   1 1
No Yes Bifidobacterium longum subsp. longum KACC 91563   1 1
No Yes Bifidobacterium longum subsp. longum F8   1 1
No Yes Bifidobacterium animalis subsp. animalis ATCC 25527   2 2
No Yes Bifidobacterium animalis subsp. lactis Bl12   2 2
No Yes Bifidobacterium animalis subsp. lactis B420   2 2
No Yes Bifidobacterium animalis subsp. lactis ATCC 27673   2 2
No Yes Bifidobacterium animalis subsp. lactis BLC1   2 2
No Yes Bifidobacterium animalis subsp. lactis CNCM I-2494   2 2
No Yes Bifidobacterium animalis subsp. lactis Bi-07   2 2
No Yes Bifidobacterium animalis subsp. lactis V9   2 2
No Yes Bifidobacterium animalis subsp. lactis DSM 10140   2 2
No Yes Bifidobacterium animalis subsp. lactis BB-12   1 1
No Yes Bifidobacterium animalis subsp. lactis AD011   2 2
No Yes Bifidobacterium breve UCC2003   1 1
No Yes Bifidobacterium asteroides PRL2011   1 1
No Yes Bifidobacterium bifidum PRL2010   1 1
No Yes Bifidobacterium bifidum BGN4   1 1
No Yes Actinomyces odontolyticus ATCC 17982   1 1
No Yes Chthonomonas calidirosea T49   1 1
No Yes Deinococcus peraridilitoris DSM 19664   1 1
No Yes [Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532   1 1
No Yes Faecalibacterium prausnitzii L2-6   3 3
No Yes Clostridium saccharolyticum Clostridium cf. saccharolyticum K10   1 1
No Yes Roseburia intestinalis XB6B4   3 3
No Yes Candidatus Arthromitus sp. SFB-rat-Yit   1 1
No Yes Candidatus Arthromitus sp. SFB-mouse-Yit   1 1
No Yes Clostridium saccharobutylicum DSM 13864   1 1
No Yes Clostridium saccharoperbutylacetonicum N1-4(HMT)   2 2
No Yes Clostridium perfringens SM101   1 1
No Yes Clostridium perfringens str. 13   2 2
No Yes Thermoanaerobacterium saccharolyticum JW/SL-YS485   1 1
No Yes Thermoanaerobacterium thermosaccharolyticum M0795   1 1
No Yes Enterococcus mundtii QU 25   1 1
No Yes Enterococcus casseliflavus EC20   1 1
No Yes Enterococcus faecium Aus0085   2 2
No Yes Enterococcus faecium NRRL B-2354   1 1
No Yes Enterococcus faecium DO   2 2
No Yes Enterococcus faecalis str. Symbioflor 1   1 1
No Yes Enterococcus faecalis D32   1 1
No Yes Enterococcus faecalis OG1RF   1 1
No Yes Enterococcus faecalis V583   1 1
No Yes Leuconostoc mesenteroides subsp. mesenteroides J18   1 1
No Yes Leuconostoc gelidum JB7   1 1
No Yes Lactobacillus paracasei subsp. paracasei 8700:2   1 1
No Yes Lactobacillus rhamnosus LOCK908   1 1
No Yes Lactobacillus rhamnosus LOCK900   1 1
No Yes Lactobacillus rhamnosus ATCC 8530   1 1
No Yes Lactobacillus rhamnosus GG   2 2
No Yes Lactobacillus rhamnosus GG   2 2
No Yes Lactobacillus johnsonii N6.2   1 1
No Yes Lactobacillus johnsonii DPC 6026   1 1
No Yes Lactobacillus johnsonii NCC 533   1 1
No Yes Lactobacillus salivarius UCC118   1 1
No Yes Lactobacillus fermentum F-6   1 1
No Yes Lactobacillus fermentum CECT 5716   1 1
No Yes Lactobacillus amylovorus GRL 1112   1 1
No Yes Lactobacillus reuteri TD1   1 1
No Yes Lactobacillus reuteri I5007   1 1
No Yes Lactobacillus reuteri JCM 1112   1 1
No Yes Lactobacillus reuteri SD2112   1 1
No Yes Lactobacillus plantarum 16   1 1
No Yes Lactobacillus plantarum ZJ316   1 1
No Yes Lactobacillus plantarum subsp. plantarum ST-III   1 1
No Yes Lactobacillus plantarum subsp. plantarum P-8   2 2
No Yes Lactobacillus plantarum WCFS1   1 1
No Yes Lactobacillus helveticus R0052   1 1
No Yes Lactobacillus helveticus H10   1 1
No Yes Lactobacillus helveticus CNRZ32   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ND02   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842   1 1
No Yes Lactobacillus delbrueckii subsp. bulgaricus 2038   1 1
No Yes Lactobacillus brevis KB290   2 2
No Yes Lactobacillus acidophilus La-14   1 1
No Yes Lactobacillus acidophilus NCFM   1 1
No Yes Pediococcus pentosaceus SL4   1 1
No Yes Lactococcus lactis subsp. lactis KLDS 4.0325   1 1
No Yes Lactococcus lactis subsp. lactis CV56   1 1
No Yes Lactococcus lactis subsp. lactis KF147   1 1
No Yes Lactococcus lactis subsp. lactis Il1403   1 1
No Yes Streptococcus thermophilus MN-ZLW-002   1 1
No Yes Streptococcus thermophilus JIM 8232   1 1
No Yes Streptococcus thermophilus ND03   1 1
No Yes Streptococcus thermophilus CNRZ1066   1 1
No Yes Streptococcus thermophilus LMG 18311   1 1
No Yes Streptococcus salivarius CCHSS3   1 1
No Yes Streptococcus salivarius JIM8777   1 1
No Yes Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1   1 1
No Yes Thermobacillus composti KWC4   4 4
No Yes Paenibacillus sp. Y412MC10   5 5
No Yes Paenibacillus mucilaginosus KNP414   5 5
No Yes Paenibacillus mucilaginosus K02   6 6
No Yes Paenibacillus polymyxa CR1   3 3
No Yes Paenibacillus polymyxa SC2   1 1
No Yes Paenibacillus polymyxa E681   2 2
No Yes Geobacillus sp. Y4.1MC1   1 1
No Yes Geobacillus sp. Y412MC52   1 1
No Yes Geobacillus sp. Y412MC61   1 1
No Yes Amphibacillus xylanus NBRC 15112   2 2
No Yes Bacillus infantis NRRL B-14911   1 1
No Yes Bacillus megaterium WSH-002   1 1
No Yes Bacillus megaterium QM B1551   1 1
No Yes Staphylococcus pseudintermedius ED99   1 1
No Yes Staphylococcus warneri SG1   1 1
No Yes Echinicola vietnamensis DSM 17526   3 3
No Yes Prevotella sp. oral taxon 299 str. F0039   2 2
No Yes Prevotella dentalis DSM 3688   2 2
No Yes Porphyromonas gingivalis TDC60   3 3
No Yes Porphyromonas gingivalis W83   3 3
No Yes Alistipes shahii WAL 8301   2 2
No Yes Bacteroides xylanisolvens XB1A   6 6
No Yes Bacteroides fragilis 638R   6 6
No Yes Bacteroides fragilis NCTC 9343   6 6
No Yes Nonlabens dokdonensis DSW-6   1 1
No Yes Fibrobacter succinogenes subsp. succinogenes S85   1 1
No Yes Brachyspira pilosicoli P43/6/78   1 1
No Yes Thermotoga maritima MSB8   2 2
No Yes Rhizobium etli CFN 42   1 1
No Yes Rhizobium etli bv. mimosae str. Mim1   1 1
No Yes Rhizobium tropici CIAT 899   1 1
No Yes Mannheimia succiniciproducens MBEL55E   2 2
No Yes Mannheimia haemolytica USMARC_2286   1 1
No Yes Mannheimia haemolytica M42548   1 1
No Yes Mannheimia haemolytica D174   1 1
No Yes Mannheimia haemolytica D153   1 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-183   1 1
No Yes Mannheimia haemolytica USDA-ARS-USMARC-185   1 1
No Yes Haemophilus parasuis ZJ0906   1 1
No Yes Actinobacillus suis H91-0380   1 1
No Yes Actinobacillus pleuropneumoniae serovar 3 str. JL03   1 1
No Yes Actinobacillus pleuropneumoniae serovar 7 str. AP76   1 1
No Yes Aeromonas hydrophila ML09-119   2 2
No Yes Vibrio fischeri ES114   1 1
No Yes Vibrio sp. EJY3   1 1
No Yes Vibrio parahaemolyticus BB22OP   1 1
No Yes Vibrio anguillarum Listonella anguillarum M3   1 1
No Yes Vibrio nigripulchritudo VibrioScope   1 1
No Yes Vibrio vulnificus CMCP6   2 2
No Yes Vibrio vulnificus YJ016   2 2
No Yes Vibrio cholerae LMA3984-4   1 1
No Yes Vibrio cholerae M66-2   1 1
No Yes Vibrio cholerae O395   1 1
No Yes Vibrio cholerae IEC224   1 1
No Yes Vibrio cholerae O1 str. 2010EL-1786   1 1
No Yes Vibrio cholerae MJ-1236   1 1
No Yes Glaciecola psychrophila 170   2 2
No Yes Alteromonas macleodii str. 'Ionian Sea UM4b'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea UM7'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U8'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U7'   1 1
No Yes Alteromonas macleodii str. 'Ionian Sea U4'   1 1
No Yes Alteromonas macleodii str. 'Aegean Sea MED64'   1 1
No Yes Alteromonas macleodii str. 'English Channel 615'   1 1
No Yes Alteromonas macleodii AltDE1   1 1
No Yes Alteromonas macleodii str. 'English Channel 673'   1 1
No Yes Alteromonas macleodii str. 'Balearic Sea AD45'   2 2
No Yes Alteromonas macleodii str. 'Black Sea 11'   1 1
No Yes Alteromonas macleodii ATCC 27126   1 1
No Yes Stenotrophomonas maltophilia D457   1 1
No Yes Stenotrophomonas maltophilia JV3   1 1
No Yes Stenotrophomonas maltophilia R551-3   1 1
No Yes Xylella fastidiosa subsp. fastidiosa GB514   1 1
No Yes Xylella fastidiosa M12   1 1
No Yes Xylella fastidiosa Temecula1   1 1
No Yes Xylella fastidiosa 9a5c   1 1
No Yes Xanthomonas citri subsp. citri Aw12879   1 1
No Yes Xanthomonas campestris pv. vesicatoria str. 85-10   1 1
No Yes Xanthomonas axonopodis pv. citrumelo F1   1 1
No Yes Xanthomonas axonopodis Xac29-1   1 1
No Yes Xanthomonas oryzae pv. oryzicola BLS256   1 1
No Yes Xanthomonas oryzae pv. oryzae MAFF 311018   1 1
No Yes Xanthomonas oryzae pv. oryzae KACC 10331   1 1
No Yes Xanthomonas campestris pv. raphani 756C   1 1
No Yes Xanthomonas campestris pv. campestris str. 8004   1 1
No Yes Xanthomonas campestris pv. campestris str. ATCC 33913   1 1
No Yes Morganella morganii subsp. morganii KT   1 1
No Yes Edwardsiella tarda C07-087   1 1
No Yes Edwardsiella tarda FL6-60   1 1
No Yes Rahnella aquatilis HX2   2 2
No Yes Yersinia pseudotuberculosis PB1/+   1 1
No Yes Yersinia pseudotuberculosis YPIII   1 1
No Yes Yersinia pseudotuberculosis IP 32953   1 1
No Yes Yersinia pestis biovar Microtus str. 91001   1 1
No Yes Yersinia pestis A1122   1 1
No Yes Yersinia pestis Z176003   1 1
No Yes Yersinia pestis D182038   1 1
No Yes Yersinia pestis D106004   1 1
No Yes Yersinia pestis biovar Medievalis str. Harbin 35   1 1
No Yes Yersinia pestis Nepal516   1 1
No Yes Yersinia pestis Antiqua   1 1
No Yes Yersinia pestis Angola   1 1
No Yes Yersinia pestis CO92   1 1
No Yes Yersinia pestis KIM10+   1 1
No Yes Yersinia enterocolitica subsp. palearctica 105.5R(r)   1 1
No Yes Yersinia enterocolitica subsp. palearctica Y11   1 1
No Yes Serratia sp. AS13   1 1
No Yes Serratia plymuthica S13   1 1
No Yes Serratia plymuthica 4Rx13   1 1
No Yes Serratia marcescens FGI94   1 1
No Yes Serratia marcescens WW4   2 2
No Yes Serratia liquefaciens ATCC 27592   1 1
No Yes Dickeya dadantii Ech586   1 1
No Yes Dickeya dadantii 3937   1 1
No Yes Pectobacterium carotovorum subsp. carotovorum PCC21   1 1
No Yes Pantoea ananatis LMG 5342   1 1
No Yes Pantoea ananatis PA13   2 2
No Yes Pantoea ananatis AJ13355   1 1
No Yes Erwinia pyrifoliae DSM 12163   1 1
No Yes Erwinia amylovora CFBP1430   1 1
No Yes Cronobacter sakazakii CMCC 45402   2 2
No Yes Cronobacter sakazakii SP291   2 2
No Yes Cronobacter sakazakii ATCC BAA-894   1 1
No Yes Raoultella ornithinolytica B6   1 1
No Yes Shigella sonnei 53G   3 3
No Yes Shigella flexneri 2002017   2 2
No Yes Shigella flexneri 2a str. 2457T   2 2
No Yes Shigella flexneri 2a str. 301   2 2
No Yes Shigella dysenteriae 1617   3 3
No Yes Shigella boydii Sb227   1 1
No Yes Salmonella bongori N268-08   1 1
No Yes Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980   1 1
No Yes Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992   1 1
No Yes Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633   1 1
No Yes Klebsiella oxytoca KCTC 1686   2 2
No Yes Klebsiella pneumoniae JM45   2 2
No Yes Klebsiella pneumoniae CG43   1 1
No Yes Klebsiella pneumoniae KCTC 2242   2 2
No Yes Klebsiella pneumoniae 342   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae 1084   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae HS11286   1 1
No Yes Klebsiella pneumoniae subsp. pneumoniae MGH 78578   2 2
No Yes Klebsiella pneumoniae subsp. rhinoscleromatis SB3432   1 1
No Yes Enterobacter aerogenes EA1509E   2 2
No Yes Escherichia coli E24377A   3 3
No Yes Escherichia coli E. coli PMV-1   3 3
No Yes Escherichia coli JJ1886   3 3
No Yes Escherichia coli LY180   3 3
No Yes Escherichia coli APEC O78   3 3
No Yes Escherichia coli O7:K1 str. CE10   3 3
No Yes Escherichia coli O104:H4 str. 2009EL-2050   3 3
No Yes Escherichia coli O104:H4 str. 2009EL-2071   3 3
No Yes Escherichia coli O104:H4 str. 2011C-3493   3 3
No Yes Escherichia coli NA114   3 3
No Yes Escherichia coli P12b   3 3
No Yes Escherichia coli str. 'clone D i2'   3 3
No Yes Escherichia coli str. 'clone D i14'   3 3
No Yes Escherichia coli UM146   3 3
No Yes Escherichia coli 042   3 3
No Yes Escherichia coli Xuzhou21   2 2
No Yes Escherichia coli IHE3034   3 3
No Yes Escherichia coli UMNK88   3 3
No Yes Escherichia coli O83:H1 str. NRG 857C   3 3
No Yes Escherichia coli ABU 83972   3 3
No Yes Escherichia coli KO11FL   3 3
No Yes Escherichia coli KO11FL   3 3
No Yes Escherichia coli LF82   3 3
No Yes Escherichia coli ED1a   3 3
No Yes Escherichia coli IAI39   3 3
No Yes Escherichia coli UMN026   3 3
No Yes Escherichia coli 55989   3 3
No Yes Escherichia coli S88   3 3
No Yes Escherichia coli IAI1   3 3
No Yes Escherichia coli W   3 3
No Yes Escherichia coli W   3 3
No Yes Escherichia coli DH1   3 3
No Yes Escherichia coli DH1   3 3
No Yes Escherichia coli ATCC 8739   3 3
No Yes Escherichia coli BL21(DE3)   3 3
No Yes Escherichia coli BL21(DE3)   3 3
No Yes Escherichia coli SMS-3-5   3 3
No Yes Escherichia coli SE15   3 3
No Yes Escherichia coli SE11   3 3
No Yes Escherichia coli APEC O1   3 3
No Yes Escherichia coli O103:H2 str. 12009   3 3
No Yes Escherichia coli UTI89   3 3
No Yes Escherichia coli 536   3 3
No Yes Escherichia coli HS   3 3
No Yes Escherichia coli ETEC H10407   3 3
No Yes Escherichia coli O55:H7 str. RM12579   3 3
No Yes Escherichia coli O55:H7 str. CB9615   3 3
No Yes Escherichia coli O26:H11 str. 11368   3 3
No Yes Escherichia coli CFT073   3 3
No Yes Escherichia coli O111:H- str. 11128   3 3
No Yes Escherichia coli O127:H6 str. E2348/69   3 3
No Yes Escherichia coli O157:H7 str. TW14359   2 2
No Yes Escherichia coli O157:H7 str. EC4115   2 2
No Yes Escherichia coli O157:H7 str. Sakai   2 2
No Yes Escherichia coli O157:H7 str. EDL933   3 3
No Yes Escherichia coli str. K-12 substr. MDS42   3 3
No Yes Escherichia coli BW2952   3 3
No Yes Escherichia coli str. K-12 substr. MG1655   3 3
No Yes Escherichia coli str. K-12 substr. W3110   3 3
No Yes Escherichia coli str. K-12 substr. DH10B   2 2
No Yes Escherichia coli B str. REL606   3 3
No Yes Enterobacter cloacae SCF1   2 2
No Yes Enterobacter cloacae EcWSU1   1 1
No Yes Enterobacter cloacae subsp. cloacae ENHKU01   1 1
No Yes Enterobacter cloacae subsp. cloacae NCTC 9394   1 1
No Yes Enterobacter cloacae subsp. cloacae ATCC 13047   2 2
No Yes Halorhabdus tiamatea SARL4B   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 6 6
No Yes Homo sapiens (NCBI version) Human 1 1
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 1 1
No Yes Loa loa v3.3 (Request) Eye worm 1 1
No Yes Brugia malayi v1.0 (Duplicate) Agent of lymphatic filariasis 1 1
No Yes Moniliophthora perniciosa FA553 (Genome survey)   2 2
No Yes Malus x domestica (Duplicate) Apple 1 1
No Yes Ricinus communis (Early assembly) Castor bean 1 1
No Yes Nicotiana benthamiana 0.4.4 (Early draft)   1 1
No Yes Solanum pimpinellifolium A-1.0 (Early draft) Currant tomato 1 1
No Yes Solanum lycopersicum v2.3 (Early assembly) Tomato 1 1
No Yes Vibrio campbellii ATCC BAA-1116 (Duplicate of NC)   1 1
No Yes Homo sapiens 69_37 Human 1 1
No Yes Pan troglodytes 69_2.1.4 Chimpanzee 1 1
No Yes Gorilla gorilla 69_3.1 Western gorilla 3 3
No Yes Pongo abelii 69_2 Sumatran orangutan 3 3
No Yes Macaca mulatta 69_1 Rhesus monkey 3 3
No Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 7 7
No Yes Otolemur garnettii 69_3 Small-eared galago 1 1
No Yes Microcebus murinus 69_1 Gray mouse lemur 1 1
No Yes Rattus norvegicus 69_3.4 Norway rat 1 1
No Yes Mus musculus 69_38 House mouse 1 1
No Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 1 1
No Yes Cavia porcellus 69_3 Domestic guinea pig 1 1
No Yes Oryctolagus cuniculus 69_2 Rabbit 1 1
No Yes Ochotona princeps 69 American pika 1 1
No Yes Tupaia belangeri 69 Northern tree shrew 1 1
No Yes Sus scrofa 69_10.2 Pig 1 1
No Yes Bos taurus 69_3.1 Cattle 1 1
No Yes Vicugna pacos 69_1 Alpaca 1 1
No Yes Tursiops truncatus 69_1 Bottlenose dolphin 1 1
No Yes Mustela putorius furo 69_1.0 Domestic ferret 1 1
No Yes Ailuropoda melanoleuca 69_1 Giant panda 1 1
No Yes Canis familiaris 69_3.1 Dog 1 1
No Yes Felis catus 69 Domestic cat 1 1
No Yes Equus caballus 69_2 Horse 1 1
No Yes Myotis lucifugus 69_2.0 Little brown bat 1 1
No Yes Pteropus vampyrus 69_1 Large flying fox 1 1
No Yes Erinaceus europaeus 69 Western European hedgehog 1 1
No Yes Procavia capensis 69_1 Cape rock hyrax 1 1
No Yes Loxodonta africana 69_3 African savanna elephant 1 1
No Yes Echinops telfairi 69 Small Madagascar hedgehog 1 1
No Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 1 1
No Yes Macropus eugenii 69_1.0 Tammar wallaby 1 1
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 1 1
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 1 1
No Yes Ornithorhynchus anatinus 69_5 Platypus 1 1
No Yes Meleagris gallopavo 69_2 Turkey 1 1
No Yes Gallus gallus 69_2 Chicken 1 1
No Yes Taeniopygia guttata 69_3.2.4 Zebra finch 1 1
No Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 1 1
No Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 2 2
No Yes Latimeria chalumnae 69_1 Coelacanth 1 1
No Yes Gadus morhua 69_1 Atlantic cod 1 1
No Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 1 1
No Yes Takifugu rubripes 69_4 Torafugu 1 1
No Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 1 1
No Yes Oryzias latipes 69_1 Japanese medaka 2 2
No Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 1 1
No Yes Oreochromis niloticus 69_1.0 Nile tilapia 2 2
No Yes Danio rerio 69_9 Zebrafish 2 2
No Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 1 1
No Yes Ciona intestinalis 69 Vase tunicate 2 2
No Yes Drosophila melanogaster 69_5 Fruit fly 2 2
No Yes Caenorhabditis elegans 69_215 Roundworm 1 1
No Yes Arabidopsis thaliana 10 Thale cress 1 1
No Yes 4_050719Q (meta-genome)   6 6
No Yes 5_050719P (meta-genome)   2 2
No Yes 6_Upper_euphotic (meta-genome)   1 1
No Yes Air microbial communities Singapore indoor air filters 2 (meta-genome)   1 1
No Yes Atta cephalotes fungus garden (ACEF) (meta-genome)   7 7
No Yes Combined (meta-genome)   19 19
No Yes Cyphomyrmex longiscapus fungus garden (meta-genome)   13 13
No Yes Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome)   6 6
No Yes Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome)   10 10
No Yes Dump bottom (Dump bottom) (meta-genome)   3 3
No Yes Dump top (Dump top) (meta-genome)   4 4
No Yes Endophytic microbiome from Rice (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #1 (meta-genome)   2 2
No Yes Fossil microbial community from Whale Fall at Santa Cruz Basin of the Pacific Ocean Sample #2 (meta-genome)   1 1
No Yes Fungus garden combined (combined) (meta-genome)   15 15
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome)   21 21
No Yes Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome)   24 24
No Yes Groundwater dechlorinating community (KB-1) from synthetic mineral medium in Toronto, ON, sample from Site contaminated with chlorinated ethenes   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 03(I) (meta-genome)   1 1
No Yes Guerrero Negro salt ponds hypersaline mat 04(N) (meta-genome)   3 3
No Yes Guerrero Negro salt ponds hypersaline mat 05(O) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 06(P) (meta-genome)   2 2
No Yes Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica), fosmids (meta-genome)   1 1
No Yes Hindgut microbiome of Nasutitermes sp. (Costa Rica) (meta-genome)   2 2
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP15 from Mushroom Spring (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP17 from Obsidian Pool Prime (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP18 from Washburn Springs #1 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome)   3 3
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome)   1 1
No Yes Hot spring microbial community from Yellowstone Hot Springs, sample YNP7 from Chocolate Pots (meta-genome)   3 3
No Yes Human Gut Community Subject 7 (meta-genome)   5 5
No Yes Human Gut Community Subject 8 (meta-genome)   2 2
No Yes Macropus eugenii forestomach microbiome from Canberra, Australia, sample Macropus_eugenii_combined (meta-genome)   5 5
No Yes Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing corn (Zea may (meta-genome)   3 3
No Yes Marine anammox bioreactor enriched for Scalindua species (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome)   3 3
No Yes Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Formate enrichment (meta-genome)   1 1
No Yes Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome)   1 1
No Yes Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Bulk soil sample from field growing Miscanthu (meta-genome)   1 1
No Yes Miscanthus rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, IL (Rhizosphere soil sample of Miscanthus x giga (meta-genome)   1 1
No Yes Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome)   1 1
No Yes Mouse Gut Community lean1 (meta-genome)   1 1
No Yes NCBI 2017_08 genome   51727 51724
No Yes Oak Ridge Pristine Groundwater FRC FW301 (meta-genome)   1 1
No Yes simHC - Simulated High Complexity Metagenome (meta-genome)   4 4
No Yes simLC - Simulated Low Complexity Metagenome (meta-genome)   1 1
No Yes Sludge/Australian, Phrap Assembly (meta-genome)   1 1
No Yes Soil microbial communities from Minnesota Farm (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome)   1 1
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome)   5 5
No Yes Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 4 Nevada Test Site Crust CO2- (meta-genome)   3 3
No Yes Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2- (Oak Ridge ambient) (meta-genome)   1 1
No Yes Soil microbial community from bioreactor at Alameda Naval Air Station, CA, contaminated with Chloroethene, Sample 196 (meta-genome)   1 1
No Yes STRING v9.0.5 (STRING)   536 535
No Yes Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome)   3 3
No Yes Termite Protist Endosymbiont Community (meta-genome)   2 2
No Yes Uniprot 2018_03 genome   14380 14374
No Yes Global Ocean Sampling Expedition (GOS)   183 183
No Yes NCBI plasmid sequences (Plasmids)   21 21
No Yes NCBI viral sequences (Viral)   1 1
No Yes PDB chains (SCOP 1.75) (PDB)   11 11
No Yes Protein Data Bank (all PDB sequenc)   57 57
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   1118 1118
No Yes TargetDB (Targets)   13 13
No Yes The Salmonella enterica Pan-genome (meta-genome)   4 4
No Yes UniProt viral sequences (Viral)   3 3

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]