SUPERFAMILY 1.75 HMM library and genome assignments server

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ENV polyprotein, receptor-binding domain superfamily domain assignments
in
Lotus japonicus

Network of domain occurrence in all genomes



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View all assignments containing a ENV polyprotein, receptor-binding domain domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   2148 2148
No Yes Homo sapiens 76_38 Human 1 1
No Yes Papio anubis 76 Olive baboon 1 1
No Yes Macaca mulatta 76_1 Rhesus monkey 1 1
No Yes Otolemur garnettii 76_3 Small-eared galago 1 1
No Yes Mus musculus 76_38 House mouse 2 2
No Yes Oryctolagus cuniculus 76_2 Rabbit 1 1
No Yes Sus scrofa 76_10.2 Pig 13 13
No Yes Ovis aries 76_3.1 Sheep 34 34
No Yes Mustela putorius furo 76_1.0 Domestic ferret 4 4
No Yes Felis catus 76_6.2 Domestic cat 9 9
No Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 80 80
No Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 1 1
No Yes Monodelphis domestica 76_5 Gray short-tailed opossum 9 9
No Yes Trypanosoma congolense 2.4   1 1
No Yes Homo sapiens 75_37 (old version GRC) Human 1 1
No Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 3 3
No Yes Macaca mulatta 69_1 Rhesus monkey 1 1
No Yes Otolemur garnettii 69_3 Small-eared galago 1 1
No Yes Mus musculus 69_38 House mouse 3 3
No Yes Sus scrofa 69_10.2 Pig 13 13
No Yes Mustela putorius furo 69_1.0 Domestic ferret 4 4
No Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 1 1
No Yes Monodelphis domestica 69_5 Gray short-tailed opossum 9 9
No Yes Guerrero Negro salt ponds hypersaline mat 09(Y) (meta-genome)   1 1
No Yes NCBI 2017_08 genome   238 238
No Yes STRING v9.0.5 (STRING)   3 3
No Yes Uniprot 2018_03 genome   1292 1292
No Yes NCBI viral sequences (Viral)   9 9
No Yes PDB chains (SCOP 1.75) (PDB)   2 2
No Yes Protein Data Bank (all PDB sequenc)   3 3
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   9 9
No Yes UniProt viral sequences (Viral)   390 390

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