Select to display Genome Domains Proteins No ALL 55327 55327 Yes Homo sapiens 76_38 Human 145 143 Yes Pan troglodytes 76_2.1.4 Chimpanzee 54 53 Yes Gorilla gorilla 76_3.1 Western gorilla 68 65 Yes Pongo abelii 76_2 Sumatran orangutan 45 44 Yes Nomascus leucogenys 76_1.0 Northern white-cheeked gibbon 45 43 Yes Papio anubis 76 Olive baboon 53 51 Yes Macaca mulatta 76_1 Rhesus monkey 68 66 Yes Callithrix jacchus 76_3.2.1 White-tufted-ear marmoset 95 92 Yes Otolemur garnettii 76_3 Small-eared galago 53 51 Yes Microcebus murinus 76_1 Gray mouse lemur 38 37 Yes Rattus norvegicus 76_5.0 Norway rat 53 52 Yes Mus musculus 76_38 House mouse 86 82 Yes Dipodomys ordii 76_1 Ord's kangaroo rat 36 35 Yes Ictidomys tridecemlineatus 76_2 Thirteen-lined ground squirrel 52 50 Yes Heterocephalus glaber v1.7-2 Naked mole-rat 47 46 Yes Cavia porcellus 76_3 Domestic guinea pig 50 47 Yes Oryctolagus cuniculus 76_2 Rabbit 54 53 Yes Ochotona princeps 76 American pika 36 36 Yes Tupaia belangeri 76 Northern tree shrew 39 38 Yes Sus scrofa 76_10.2 Pig 57 56 Yes Bos taurus 76_3.1 Cattle 55 55 Yes Ovis aries 76_3.1 Sheep 53 53 Yes Vicugna pacos 76_1 Alpaca 22 22 Yes Tursiops truncatus 76_1 Bottlenose dolphin 46 44 Yes Mustela putorius furo 76_1.0 Domestic ferret 50 49 Yes Ailuropoda melanoleuca 76_1 Giant panda 57 56 Yes Canis familiaris 76_3.1 Dog 58 56 Yes Felis catus 76_6.2 Domestic cat 48 48 Yes Equus caballus 76_2 Horse 51 50 Yes Myotis lucifugus 76_2.0 Little brown bat 45 45 Yes Pteropus vampyrus 76_1 Large flying fox 46 45 Yes Sorex araneus 76_1 European shrew 23 22 Yes Erinaceus europaeus 76 Western European hedgehog 31 30 Yes Procavia capensis 76_1 Cape rock hyrax 38 37 Yes Loxodonta africana 76_3 African savanna elephant 60 58 Yes Echinops telfairi 76 Small Madagascar hedgehog 35 35 Yes Dasypus novemcinctus 76_2 Nine-banded armadillo 60 58 Yes Choloepus hoffmanni 76_1 Hoffmann's two-fingered sloth 21 21 Yes Macropus eugenii 76_1.0 Tammar wallaby 36 36 Yes Sarcophilus harrisii 76_7.0 Tasmanian devil 51 50 Yes Monodelphis domestica 76_5 Gray short-tailed opossum 46 46 Yes Ornithorhynchus anatinus 76_5 Platypus 45 43 Yes Saccoglossus kowalevskii v3.0 37 37 Yes Petromyzon marinus 76_7.0 Sea lamprey 20 19 Yes Meleagris gallopavo 76_2 Turkey 37 37 Yes Gallus gallus 76_4 Chicken 38 37 Yes Anas platyrhynchos 76_1.0 Mallard 35 34 Yes Taeniopygia guttata 76_3.2.4 Zebra finch 39 38 Yes Ficedula albicollis 76_1.0 Collared flycatcher 43 42 Yes Pelodiscus sinensis 76_1.0 Chinese soft-shelled turtle 42 41 Yes Anolis carolinensis 76_2.0 Green anole 43 42 Yes Xenopus laevis African clawed frog 38 36 Yes Xenopus tropicalis 76_4.2 Tropical clawed frog 42 41 Yes Latimeria chalumnae 76_1 Coelacanth 58 56 Yes Lepisosteus oculatus 76 Spotted gar 59 57 Yes Gadus morhua 76_1 Atlantic cod 65 63 Yes Tetraodon nigroviridis 76_8 Spotted green pufferfish 65 63 Yes Takifugu rubripes 76_4 Torafugu 94 90 Yes Gasterosteus aculeatus 76_1 Three-spined stickleback 68 66 Yes Oryzias latipes 76_1 Japanese medaka 64 63 Yes Xiphophorus maculatus 76_4.4.2 Southern platyfish 78 75 Yes Poecilia formosa 76 Amazon molly 94 85 Yes Oreochromis niloticus 76_1.0 Nile tilapia 111 109 Yes Astyanax mexicanus 76 Mexican tetra 78 76 Yes Danio rerio 76_9 Zebrafish 113 110 Yes Oikopleura dioica 8 8 Yes Ciona savignyi 76_2.0 Pacific transparent sea squirt 9 8 Yes Ciona intestinalis 76 Vase tunicate 11 10 Yes Strongylocentrotus purpuratus v3.1 Purple sea urchin 20 17 Yes Adineta vaga 13 13 Yes Octopus bimaculoides 280 10 10 Yes Crassostrea gigas 22 Pacific oyster 393 346 Yes Lottia gigantea Owl limpet 16 15 Yes Helobdella robusta 16 13 Yes Capitella sp. I 62 39 Yes Danaus plexippus OGS1.0 Monarch butterfly 2 2 Yes Heliconius melpomene Postman butterfly 2 2 Yes Bombyx mori Domestic silkworm 1 1 Yes Nasonia vitripennis Jewel wasp 1 1 Yes Apis mellifera 38.2d (Not maintained) Honey bee 3 3 Yes Harpegnathos saltator v3.3 Jerdon's jumping ant 2 2 Yes Linepithema humile v1.1 Argentine ant 2 2 Yes Pogonomyrmex barbatus v1.2 Red harvester ant 3 3 Yes Solenopsis invicta v.2.2.3 Red fire ant 3 3 Yes Acromyrmex echinatior v3.8 Panamanian leafcutter ant 2 2 Yes Atta cephalotes v1.1 2 2 Yes Camponotus floridanus v3.3 Florida carpenter ant 3 3 Yes Lucilia cuprina Australian sheep blowfly 1 1 Yes Drosophila grimshawi 1.3 1 1 Yes Drosophila willistoni 1.3 1 1 Yes Drosophila pseudoobscura 2.13 1 1 Yes Drosophila persimilis 1.3 1 1 Yes Drosophila suzukii 1 1 Yes Drosophila yakuba 1.3 1 1 Yes Drosophila simulans 1.3 1 1 Yes Drosophila sechellia 1.3 1 1 Yes Drosophila melanogaster 76_5 Fruit fly 2 2 Yes Drosophila erecta 1.3 1 1 Yes Drosophila ananassae 1.3 1 1 Yes Drosophila virilis 1.2 1 1 Yes Drosophila mojavensis 1.3 1 1 Yes Aedes aegypti 55 (Not maintained) Yellow fever mosquito 1 1 Yes Culex pipiens quinquefasciatus Southern house mosquito 1 1 Yes Anopheles darlingi 22 American malaria mosquito 1 1 Yes Anopheles gambiae 49_3j African malaria mosquito 1 1 Yes Tribolium castaneum 3.0 Red flour beetle 1 1 Yes Pediculus humanus corporis Human body louse 1 1 Yes Acyrthosiphon pisum Pea aphid 2 2 Yes Rhodnius prolixus 22 2 2 Yes Daphnia pulex Common water flea 156 154 Yes Strigamia maritima 22 5 5 Yes Tetranychus urticae Two-spotted spider mite 1 1 Yes Ixodes scapularis Black-legged tick 2 2 Yes Caenorhabditis brenneri 1 1 Yes Caenorhabditis elegans 76_235 Roundworm 1 1 Yes Caenorhabditis briggsae 2 1 1 Yes Hymenolepis microstoma 1 1 Yes Echinococcus multilocularis 2 2 Yes Echinococcus granulosus 2 2 Yes Taenia solium Pork tapeworm 2 2 Yes Schistosoma mansoni 2 2 Yes Acropora digitifera v1.0 19 17 Yes Nematostella vectensis 1.0 Starlet sea anemone 7 6 Yes Hydra vulgaris 8 8 Yes Trichoplax adhaerens 1 1 Yes Monosiga brevicollis 5 4 Yes Dictyostelium discoideum 1 1 Yes Cyanophora paradoxa 5 5 Yes Pythium arrhenomanes ATCC 12531 22 1 1 Yes Phytophthora sojae 1.1 2 2 Yes Phytophthora capsici 1 1 Yes Symbiodinium minutum clade B1 v1.2 5 2 No Streptomyces cattleya NRRL 8057 = DSM 46488 1 1 No Meiothermus silvanus DSM 9946 1 1 No Ethanoligenens harbinense YUAN-3 1 1 No Oscillibacter valericigenes Sjm18-20 1 1 No Syntrophobotulus glycolicus DSM 8271 1 1 No Desulfotomaculum ruminis DSM 2154 1 1 No Clostridium perfringens ATCC 13124 1 1 No Caldicellulosiruptor hydrothermalis 108 1 1 No Paenibacillus sp. JDR-2 2 2 No Paenibacillus terrae HPL-003 1 1 No Paenibacillus polymyxa M1 2 2 No Lysinibacillus sphaericus C3-41 1 1 No Bacillus sp. JS 1 1 No Bacillus atrophaeus 1942 2 2 No Bacillus subtilis subsp. subtilis str. 168 2 2 No Bacillus licheniformis DSM 13 = ATCC 14580 1 1 No Bacillus halodurans C-125 1 1 No Bacillus weihenstephanensis KBAB4 4 4 No Bacillus thuringiensis str. Al Hakam 4 4 No Bacillus cereus 03BB102 4 4 No Bacillus anthracis str. A0248 3 3 No Bacillus pumilus SAFR-032 1 1 No Dyadobacter fermentans DSM 18053 1 1 No Runella slithyformis DSM 19594 1 1 No Solitalea canadensis DSM 3403 2 2 No Owenweeksia hongkongensis DSM 17368 2 2 No Zunongwangia profunda SM-A87 1 1 No Krokinobacter sp. 4H-3-7-5 1 1 No Lacinutrix sp. 5H-3-7-4 1 1 No Zobellia galactanivorans 1 1 No Flavobacteriaceae bacterium 3519-10 1 1 No Flavobacterium indicum GPTSA100-9 3 3 No Desulfovibrio africanus str. Walvis Bay 1 1 No Phaeobacter gallaeciensis 2.10 1 1 No Ketogulonicigenium vulgare Y25 1 1 No Ketogulonigenium vulgarum WSH-001 1 1 No Roseobacter litoralis Och 149 2 2 No Roseobacter denitrificans OCh 114 1 1 No Paracoccus denitrificans PD1222 1 1 No Azospirillum lipoferum 4B 1 1 No Azospirillum brasilense Sp245 1 1 No Xanthobacter autotrophicus Py2 1 1 No Agrobacterium sp. H13-3 1 1 No Oligotropha carboxidovorans OM4 1 1 No Nitrobacter hamburgensis X14 1 1 No Shewanella woodyi ATCC 51908 1 1 No Pseudomonas sp. TKP 1 1 No Pseudomonas brassicacearum subsp. brassicacearum NFM421 1 1 No Pseudomonas entomophila L48 1 1 No Pseudomonas protegens Pf-5 1 1 No Pseudomonas fluorescens SBW25 1 1 Yes Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) Tropical clawed frog 62 60 Yes Drosophila melanogaster FlyBase 5.12 (FlyBase) Fruit fly 2 2 Yes Anopheles gambiae VectorBase AgamP3.6 (VectorBase) African malaria mosquito 1 1 Yes Caenorhabditis elegans WormBase WS218 (WormBase) Roundworm 1 1 No Streptomyces cattleya NRRL 8057 = DSM 46488 1 1 No Clostridium acidurici 9a 1 1 No Desulfosporosinus meridiei DSM 13257 1 1 No Clostridium perfringens SM101 1 1 No Clostridium perfringens str. 13 1 1 No Lactococcus lactis subsp. cremoris SK11 1 1 No Paenibacillus larvae subsp. larvae DSM 25430 2 2 No Paenibacillus polymyxa CR1 1 1 No Paenibacillus polymyxa SC2 2 2 No Paenibacillus polymyxa E681 1 1 No Bacillus amyloliquefaciens XH7 1 1 No Bacillus amyloliquefaciens LL3 1 1 No Bacillus amyloliquefaciens TA208 1 1 No Bacillus subtilis PY79 2 2 No Bacillus subtilis XF-1 2 2 No Bacillus subtilis QB928 1 1 No Bacillus subtilis BSn5 3 3 No Bacillus subtilis subsp. subtilis str. BAB-1 1 1 No Bacillus subtilis subsp. subtilis str. BSP1 1 1 No Bacillus subtilis subsp. subtilis str. RO-NN-1 1 1 No Bacillus subtilis subsp. subtilis 6051-HGW 2 2 No Bacillus subtilis subsp. spizizenii TU-B-10 4 4 No Bacillus subtilis subsp. spizizenii str. W23 1 1 No Bacillus subtilis subsp. natto BEST195 1 1 No Bacillus toyonensis BCT-7112 2 2 No Bacillus thuringiensis HD-771 3 3 No Bacillus thuringiensis HD-789 3 3 No Bacillus thuringiensis MC28 4 4 No Bacillus thuringiensis serovar chinensis CT-43 2 2 No Bacillus thuringiensis YBT-1518 2 2 No Bacillus thuringiensis Bt407 2 2 No Bacillus thuringiensis serovar konkukian str. 97-27 4 4 No Bacillus thuringiensis serovar kurstaki str. HD73 1 1 No Bacillus thuringiensis BMB171 7 7 No Bacillus thuringiensis serovar finitimus YBT-020 3 3 No Bacillus thuringiensis serovar thuringiensis str. IS5056 3 3 No Bacillus cereus FRI-35 1 1 No Bacillus cereus biovar anthracis str. CI 4 4 No Bacillus cereus AH820 3 3 No Bacillus cereus AH187 2 2 No Bacillus cereus B4264 3 3 No Bacillus cereus G9842 3 3 No Bacillus cereus Q1 2 2 No Bacillus cereus F837/76 4 4 No Bacillus cereus NC7401 2 2 No Bacillus cereus E33L 5 5 No Bacillus cereus ATCC 14579 5 5 No Bacillus cereus ATCC 10987 3 3 No Bacillus anthracis str. H9401 4 4 No Bacillus anthracis str. CDC 684 4 4 No Bacillus anthracis str. 'Ames Ancestor' 4 4 No Bacillus anthracis str. Sterne 4 4 No Bacillus anthracis str. Ames 4 4 No Bacillus megaterium WSH-002 2 2 No Bacillus megaterium QM B1551 3 3 No Nonlabens dokdonensis DSW-6 1 1 No Leisingera methylohalidivorans DSM 14336 1 1 No Oligotropha carboxidovorans OM5 1 1 No Oligotropha carboxidovorans OM5 1 1 No Mannheimia haemolytica USMARC_2286 3 3 No Mannheimia haemolytica M42548 3 3 No Mannheimia haemolytica D174 3 3 No Mannheimia haemolytica D153 3 3 No Mannheimia haemolytica USDA-ARS-USMARC-183 2 2 No Mannheimia haemolytica USDA-ARS-USMARC-185 1 1 No Pseudomonas monteilii SB3101 1 1 No Pseudomonas monteilii SB3078 1 1 No Pseudomonas putida S16 1 1 No Pseudomonas protegens CHA0 1 1 No Pseudomonas poae RE*1-1-14 1 1 No Pseudomonas fluorescens F113 1 1 No Pseudomonas fluorescens A506 1 1 No Pseudomonas fluorescens Pf0-1 2 2 Yes Homo sapiens 75_37 (old version GRC) Human 155 152 Yes Homo sapiens Human 79 77 Yes Mus musculus 63_37 (longest transcript per gene) (Duplicate) House mouse 54 51 Yes Heliconius numata 1 1 Yes Homo sapiens 69_37 Human 76 73 Yes Pan troglodytes 69_2.1.4 Chimpanzee 51 50 Yes Gorilla gorilla 69_3.1 Western gorilla 50 48 Yes Pongo abelii 69_2 Sumatran orangutan 44 43 Yes Nomascus leucogenys 69_1.0 Northern white-cheeked gibbon 43 41 Yes Macaca mulatta 69_1 Rhesus monkey 49 47 Yes Callithrix jacchus 69_3.2.1 White-tufted-ear marmoset 51 49 Yes Otolemur garnettii 69_3 Small-eared galago 53 51 Yes Microcebus murinus 69_1 Gray mouse lemur 38 37 Yes Rattus norvegicus 69_3.4 Norway rat 45 43 Yes Mus musculus 69_38 House mouse 52 50 Yes Dipodomys ordii 69_1 Ord's kangaroo rat 36 35 Yes Ictidomys tridecemlineatus 69_2 Thirteen-lined ground squirrel 52 50 Yes Cavia porcellus 69_3 Domestic guinea pig 48 46 Yes Oryctolagus cuniculus 69_2 Rabbit 47 46 Yes Ochotona princeps 69 American pika 36 36 Yes Tupaia belangeri 69 Northern tree shrew 39 38 Yes Sus scrofa 69_10.2 Pig 50 49 Yes Bos taurus 69_3.1 Cattle 52 52 Yes Vicugna pacos 69_1 Alpaca 22 22 Yes Tursiops truncatus 69_1 Bottlenose dolphin 46 44 Yes Mustela putorius furo 69_1.0 Domestic ferret 49 48 Yes Ailuropoda melanoleuca 69_1 Giant panda 49 48 Yes Canis familiaris 69_3.1 Dog 50 48 Yes Felis catus 69 Domestic cat 34 34 Yes Equus caballus 69_2 Horse 50 49 Yes Myotis lucifugus 69_2.0 Little brown bat 45 45 Yes Pteropus vampyrus 69_1 Large flying fox 46 45 Yes Sorex araneus 69_1 European shrew 23 22 Yes Erinaceus europaeus 69 Western European hedgehog 31 30 Yes Procavia capensis 69_1 Cape rock hyrax 38 37 Yes Loxodonta africana 69_3 African savanna elephant 50 49 Yes Echinops telfairi 69 Small Madagascar hedgehog 35 35 Yes Dasypus novemcinctus 69_2 Nine-banded armadillo 26 26 Yes Choloepus hoffmanni 69_1 Hoffmann's two-fingered sloth 21 21 Yes Macropus eugenii 69_1.0 Tammar wallaby 36 36 Yes Sarcophilus harrisii 69_7.0 Tasmanian devil 44 43 Yes Monodelphis domestica 69_5 Gray short-tailed opossum 45 45 Yes Ornithorhynchus anatinus 69_5 Platypus 41 39 Yes Petromyzon marinus 69_7.0 Sea lamprey 20 19 Yes Meleagris gallopavo 69_2 Turkey 33 33 Yes Gallus gallus 69_2 Chicken 38 37 Yes Taeniopygia guttata 69_3.2.4 Zebra finch 37 36 Yes Pelodiscus sinensis 69_1.0 Chinese soft-shelled turtle 38 37 Yes Anolis carolinensis 69_2.0 Green anole 37 36 Yes Xenopus tropicalis 69_4.2 Tropical clawed frog 38 37 Yes Latimeria chalumnae 69_1 Coelacanth 50 48 Yes Gadus morhua 69_1 Atlantic cod 53 51 Yes Tetraodon nigroviridis 69_8 Spotted green pufferfish 59 57 Yes Takifugu rubripes 69_4 Torafugu 50 47 Yes Gasterosteus aculeatus 69_1 Three-spined stickleback 54 52 Yes Oryzias latipes 69_1 Japanese medaka 54 53 Yes Xiphophorus maculatus 69_4.4.2 Southern platyfish 78 75 Yes Oreochromis niloticus 69_1.0 Nile tilapia 94 92 Yes Danio rerio 69_9 Zebrafish 82 80 Yes Ciona savignyi 69_2.0 Pacific transparent sea squirt 9 8 Yes Ciona intestinalis 69 Vase tunicate 11 10 Yes Drosophila melanogaster 69_5 Fruit fly 1 1 Yes Caenorhabditis elegans 69_215 Roundworm 1 1 No 1_050719N (meta-genome) 1 1 No 1_Upper_euphotic (meta-genome) 1 1 No 3_Below_base_of_euphotic (meta-genome) 1 1 No 5_050719P (meta-genome) 1 1 No 6_Upper_euphotic (meta-genome) 1 1 No Air microbial communities Singapore indoor air filters 2 (meta-genome) 1 1 No Dendroctonus ponderosae beetle community (MPB hybrid beetle) (Lodgepole pine) (meta-genome) 1 1 No Dendroctonus ponderosae fungus gallery (Hybrid pine) (MPB hybrid gallery) (meta-genome) 1 1 No Dump bottom (Dump bottom) (meta-genome) 8 8 No Dump top (Dump top) (meta-genome) 2 2 No Freshwater propionate enrichment of Brocadia fulgida (meta-genome) 1 1 No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden bottom (Fungus garden bottom) (meta-genome) 1 1 No Fungus garden microbial communities from Atta colombica in Panama, sample from fungus garden top (meta-genome) 4 4 No Guerrero Negro salt ponds hypersaline mat 01(G) (meta-genome) 1 1 No Guerrero Negro salt ponds hypersaline mat 07(S) (meta-genome) 1 1 No Guerrero Negro salt ponds hypersaline mat 10(Z) (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP16 from Fairy Spring Red Layer (meta-genome) 1 1 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP20 from Bath Lake Vista Annex - Purple-Sulfur Mats (meta-genome) 2 2 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP5 from Bath Lake Vista Annex (meta-genome) 2 2 No Hot spring microbial community from Yellowstone Hot Springs, sample YNP6 from White Creek Site 3 (meta-genome) 1 1 No Methylotrophic community from Lake Washington sediment combined (v2) (meta-genome) 2 2 No Methylotrophic community from Lake Washington sediment Formaldehyde enrichment (meta-genome) 1 1 No Methylotrophic community from Lake Washington sediment Methane enrichment (meta-genome) 1 1 No Mountain Pine Beetle microbial communities from Grand Prairie, Alberta, sample from Hybrid pine (MPB hybrid beetle) (meta-genome) 2 2 No NCBI 2017_08 genome 25085 24555 No simHC - Simulated High Complexity Metagenome (meta-genome) 2 2 No simLC - Simulated Low Complexity Metagenome (meta-genome) 2 2 No Soil microbial communities from Minnesota Farm (meta-genome) 1 1 No Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2- (Maryland Estuary ambient) (meta-genome) 2 2 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2+ (meta-genome) 3 3 No Soil microbial communities from sample at FACE Site 3 Nevada Test Site Creosote CO2- (meta-genome) 1 1 No STRING v9.0.5 (STRING) 1483 1430 No Switchgrass rhizosphere microbial community from Michigan, US, sample from East Lansing bulk soil (meta-genome) 2 2 No Uniprot 2018_03 genome 15215 14867 No Wastewater Terephthalate-degrading communities from Bioreactor (meta-genome) 1 1 No Global Ocean Sampling Expedition (GOS) 667 667 No NCBI plasmid sequences (Plasmids) 9 9 No NCBI viral sequences (Viral) 48 48 No PDB chains (SCOP 1.75 ) (PDB) 40 40 No Protein Data Bank (all PDB sequenc) 545 533 No SCOP2 SCOPe CATH ECOD (all domain sequ) 1295 1295 No TargetDB 16 16 No UniProt 16 16
