SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.


Soluble secreted chemokine inhibitor, VCCI superfamily domain assignments
in
SCOP2 SCOPe CATH ECOD

Network of domain occurrence in all genomes


Assignment details

(show help)


SCOP2 SCOPe CATH ECOD (all domain sequ) has 25 significant domains in 25 proteins.

     

Sequence ID   Evalue   Region   Family  
000001379|e1cq3A1|527.1.1.2|A:10-233   3.27e-90   2-223   Soluble secreted chemokine inhibitor, VCCI  
000032384|e1cq3B1|527.1.1.2|B:10-233   3.27e-90   2-223   Soluble secreted chemokine inhibitor, VCCI  
000160504|e2grkA1|527.1.1.2|A:1-228   4.45e-110   2-224   Soluble secreted chemokine inhibitor, VCCI  
000161466|e2ffkA1|527.1.1.2|A:1-242   4.45e-117   9-242   Soluble secreted chemokine inhibitor, VCCI  
000167134|e2vgaA1|527.1.1.2|A:14-207   1.57e-64   1-194   Soluble secreted chemokine inhibitor, VCCI  
000299589|e2grkB1|527.1.1.2|B:1-228   4.45e-110   2-224   Soluble secreted chemokine inhibitor, VCCI  
000304375|e2finA1|527.1.1.2|A:1-242   4.45e-117   9-242   Soluble secreted chemokine inhibitor, VCCI  
001567473|e4zkbA1|527.1.1.2|A:11-157,A:199-269   1.09e-58   27-216   Soluble secreted chemokine inhibitor, VCCI  
001568630|e4zk9A1|527.1.1.2|A:11-157,A:201-269   1.57e-57   27-214   Soluble secreted chemokine inhibitor, VCCI  
001569473|e4zkcA1|527.1.1.2|A:11-157,A:200-269   4.97e-58   27-215   Soluble secreted chemokine inhibitor, VCCI  
001569478|e4p5iA1|527.1.1.2|A:5-157,A:199-270   1.23e-58   33-222   Soluble secreted chemokine inhibitor, VCCI  
002073369|e5d28A1|527.1.1.2|A:2-212   0.0000000000301   5-207   Soluble secreted chemokine inhibitor, VCCI  
002073370|e5d28D1|527.1.1.2|D:2-212   0.0000000000301   5-207   Soluble secreted chemokine inhibitor, VCCI  
cath|current|1cq3A00/1-224   8.24e-106   12-233   Soluble secreted chemokine inhibitor, VCCI  
cath|current|1cq3B00/1-224   8.24e-106   12-233   Soluble secreted chemokine inhibitor, VCCI  
cath|current|2ffkA00/1-242   4.45e-117   9-242   Soluble secreted chemokine inhibitor, VCCI  
cath|current|2finA00/1-242   4.45e-117   9-242   Soluble secreted chemokine inhibitor, VCCI  
cath|current|2grkA00/8-235   4.45e-110   2-224   Soluble secreted chemokine inhibitor, VCCI  
cath|current|2grkB00/8-235   4.45e-110   2-224   Soluble secreted chemokine inhibitor, VCCI  
d1cq3a_   3.27e-90   2-223   Soluble secreted chemokine inhibitor, VCCI  
d1cq3b_   3.27e-90   2-223   Soluble secreted chemokine inhibitor, VCCI  
d2ffka_   4.45e-117   9-242   Soluble secreted chemokine inhibitor, VCCI  
d2fina_   4.45e-117   9-242   Soluble secreted chemokine inhibitor, VCCI  
d2grka1   3.66e-81   4-223   Soluble secreted chemokine inhibitor, VCCI  
d2grkb1   3.66e-81   4-223   Soluble secreted chemokine inhibitor, VCCI  

Jump to [ Top of page · Assignment details · Add assignments from individual genomes ]


Add assignments from groups of genomes

View all assignments containing a Soluble secreted chemokine inhibitor, VCCI domain in each group of genomes.

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes ]


Add assignments from individual genomes

Select additional genomes you would like to see domain assignments for, then click 'Submit'.

Select to display   Genome       Domains   Proteins
No Yes ALL   549 549
No Yes NCBI 2017_08 genome   59 59
No Yes Uniprot 2018_03 genome   296 296
No Yes Global Ocean Sampling Expedition (GOS)   1 1
No Yes NCBI viral sequences (Viral)   39 39
No Yes PDB chains (SCOP 1.75) (PDB)   1 1
No Yes Protein Data Bank (all PDB sequenc)   13 13
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   25 25
No Yes TargetDB (Targets)   2 2
No Yes UniProt viral sequences (Viral)   113 113

Jump to [ Top of page · Assignment details · Add assignments from groups of genomes · Add assignments from individual genomes ]