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Agglutinin superfamily domain assignments
in
Malus domestica v196

Network of domain occurrence in all genomes


Assignment details

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Malus domestica v196 has 37 significant domains in 26 proteins.

     

Sequence ID   Evalue   Region   Family  
MDP0000134302|PACid:22621095   6.8e-18   6-134   Agglutinin  
MDP0000138196|PACid:22638282   0.0000000118   3-82   Agglutinin  
MDP0000143875|PACid:22677466   0.000017   73-126   Agglutinin  
  0.00667   23-64   Agglutinin  
MDP0000149649|PACid:22658521   1.96e-18   6-134   Agglutinin  
MDP0000166067|PACid:22620555   6.15e-18   6-134   Agglutinin  
MDP0000167664|PACid:22670944   6.28e-18   6-134   Agglutinin  
MDP0000186067|PACid:22670141   0.000000000575   6-118   Agglutinin  
MDP0000186108|PACid:22670213   2.09e-47   4-148   Agglutinin  
  0.00968   159-181   Agglutinin  
MDP0000186287|PACid:22622971   5.49e-18   6-134   Agglutinin  
MDP0000192309|PACid:22648245   1.31e-17   6-134   Agglutinin  
MDP0000198856|PACid:22642040   9.94e-18   6-133   Agglutinin  
MDP0000210676|PACid:22628322   6.67e-18   6-134   Agglutinin  
MDP0000221794|PACid:22660827   0.000000000575   6-118   Agglutinin  
MDP0000222520|PACid:22630398   0.000000105   45-163   Agglutinin  
MDP0000258125|PACid:22669584   0.00000000000000183   6-133   Agglutinin  
MDP0000277475|PACid:22682592   8.76e-21   7-70   Agglutinin  
  0.00000327   69-123   Agglutinin  
MDP0000278101|PACid:22620742   1.96e-41   4-147   Agglutinin  
  0.0353   161-192   Agglutinin  
MDP0000295606|PACid:22642039   4.71e-39   4-147   Agglutinin  
  3.4e-22   162-294   Agglutinin  
MDP0000380205|PACid:22657505   1.26e-38   181-320   Agglutinin  
  1.83e-27   4-174   Agglutinin  
MDP0000426531|PACid:22645239   2.75e-17   6-133   Agglutinin  
MDP0000568858|PACid:22680271   3.4e-40   185-321   Agglutinin  
  1.01e-27   4-176   Agglutinin  
MDP0000732429|PACid:22654162   0.0000000000000112   326-455   Agglutinin  
  0.0000000000000114   165-294   Agglutinin  
  0.0000000000000127   6-134   Agglutinin  
MDP0000764263|PACid:22682596   5.23e-37   162-303   Agglutinin  
  7.19e-37   5-146   Agglutinin  
  2.62e-20   322-454   Agglutinin  
MDP0000772451|PACid:22681810   4.05e-35   3-131   Agglutinin  
  2.09e-19   185-317   Agglutinin  
MDP0000816071|PACid:22674798   8.24e-22   4-138   Agglutinin  
  0.00000000000111   146-268   Agglutinin  
MDP0000903965|PACid:22650325   4.84e-41   4-147   Agglutinin  
  1.57e-23   161-295   Agglutinin  
 
Weak hits:
MDP0000306054|PACid:22647114   0.00017   266-305   Agglutinin  
MDP0000307912|PACid:22650868   0.00575   6-103   Agglutinin  

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View all assignments containing a Agglutinin domain in each group of genomes.

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Select to display   Genome       Domains   Proteins
No Yes ALL   1272 1272
No Yes Selaginella moellendorffii   16 12
No Yes Pinus taeda Loblolly pine 1 1
No Yes Picea abies Norway spruce 3 2
No Yes Gossypium raimondii v221   21 9
No Yes Carica papaya Papaya 33 19
No Yes Cucumis sativus v122 Cucumber 21 11
No Yes Fragaria vesca Wild strawberry 22 11
No Yes Malus domestica v196 Apple 37 26
No Yes Prunus persica v139 Peach 6 6
No Yes Linum usitatissimum v200 Flax 38 29
No Yes Vitis vinifera Wine grape 7 3
No Yes Actinidia chinensis Hongyang   2 1
No Yes Aquilegia coerulea v195   4 2
No Yes Triticum urartu 22   4 2
No Yes Triticum aestivum 22 Bread wheat 5 4
No Yes Aegilops tauschii 22   9 7
No Yes Brachypodium distachyon Stiff brome 4 2
No Yes Phyllostachys heterocyclavar. pubescens Kikko-chiku 2 1
No Yes Panicum virgatum v202 Switchgrass 10 7
No Yes Setaria italica v164 Foxtail millet 2 1
No Yes Zea mays subsp. mays Maize 3 3
No Yes Zea mays v181 Maize 4 4
No Yes Hordeum vulgare 22 Domesticated barley 20 12
No Yes Malus x domestica (Duplicate) Apple 37 26
No Yes Ricinus communis (Early assembly) Castor bean 8 4
No Yes NCBI 2017_08 genome   406 230
No Yes STRING v9.0.5 (STRING)   6 3
No Yes Uniprot 2018_03 genome   363 222
No Yes PDB chains (SCOP 1.75) (PDB)   2 1
No Yes Protein Data Bank (all PDB sequenc)   8 4
No Yes SCOP2 SCOPe CATH ECOD (all domain sequ)   24 24

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